CsGy1G012250 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAACTCACACACACACACATATATATAAAAAGACACCCTCAAAGGCACTCAAAAGTGAGATATCAACCTAGCTTGTTAGCTCAAAAAACACAACACACACACATACTAATGCAAGGGGCTCCAAATGAAGATCAAACAAAAGCTTCAACAATAATCCAAAAACAAAAGTGCCCTCGTTGCGACTCTTCCAACACCAAATTTTGTTATTACAATAACTACAGCCTTTCACAGCCTCGTTACTTTTGTAAGTCTTGTCGACGCTACTGGACTCATGGCGGCACTCTCCGTAACGTACCCATCGGTGGTGGCTCCAGAAAATCCAAGCGCCCTAAGTCCACATTATTGCCTTCCTCTTCTTCTTCTTCCGACACCACCACCACCCTAACTCCGCCACCGCCCGGAGGATCAGGACCTCTTGATCTTGCAACTTCTTCTTATAATTCTAGTGCTGCCTTTTTGTCATCCTTGGATGTGGGGGCTGCTTATAGTTCATTTGGAGGATTGGCTTGGACTACTGCTACTCCCATCAACAACACAATTATTACTAATAATCACTCTTCCTCTTCAGGTAATAACCAAAATTCTAGCTTTCAAATTGAAAATAGTTCTTCTACTTTGATCCCAAATCATCTCTCTCCCTTTCATCATCCCGAGTAGTACTTAGCTGCTAGTTCGACTGCATATTTTTTTCCTTCAAACTTTTAGGAAAATTAAAAAGAAGAAGAAGAAAGAAAAAAAAGAATGGTTGGTCGTATCAAATCACAAGAAAAATAGTTGCAGCTCGGCTAGAAGTTAAGTACTATGTAAGTAAGTTGGGCTTTTTATCAGTTTAAATAATCTGTAAGATTTTCTTGTGATGTATTAAATGCAATTCAAATAGGTTGATGAAAATTATGATCACATGAGTTAAAAGTCCAATTTCTATTTATCTTTGGGCT AAAAAAACTCACACACACACACATATATATAAAAAGACACCCTCAAAGGCACTCAAAAGTGAGATATCAACCTAGCTTGTTAGCTCAAAAAACACAACACACACACATACTAATGCAAGGGGCTCCAAATGAAGATCAAACAAAAGCTTCAACAATAATCCAAAAACAAAAGTGCCCTCGTTGCGACTCTTCCAACACCAAATTTTGTTATTACAATAACTACAGCCTTTCACAGCCTCGTTACTTTTGTAAGTCTTGTCGACGCTACTGGACTCATGGCGGCACTCTCCGTAACGTACCCATCGGTGGTGGCTCCAGAAAATCCAAGCGCCCTAAGTCCACATTATTGCCTTCCTCTTCTTCTTCTTCCGACACCACCACCACCCTAACTCCGCCACCGCCCGGAGGATCAGGACCTCTTGATCTTGCAACTTCTTCTTATAATTCTAGTGCTGCCTTTTTGTCATCCTTGGATGTGGGGGCTGCTTATAGTTCATTTGGAGGATTGGCTTGGACTACTGCTACTCCCATCAACAACACAATTATTACTAATAATCACTCTTCCTCTTCAGGTAATAACCAAAATTCTAGCTTTCAAATTGAAAATAGTTCTTCTACTTTGATCCCAAATCATCTCTCTCCCTTTCATCATCCCGAGTAGTACTTAGCTGCTAGTTCGACTGCATATTTTTTTCCTTCAAACTTTTAGGAAAATTAAAAAGAAGAAGAAGAAAGAAAAAAAAGAATGGTTGGTCGTATCAAATCACAAGAAAAATAGTTGCAGCTCGGCTAGAAGTTAAGTACTATGTAAGTAAGTTGGGCTTTTTATCAGTTTAAATAATCTGTAAGATTTTCTTGTGATGTATTAAATGCAATTCAAATAGGTTGATGAAAATTATGATCACATGAGTTAAAAGTCCAATTTCTATTTATCTTTGGGCT ATGCAAGGGGCTCCAAATGAAGATCAAACAAAAGCTTCAACAATAATCCAAAAACAAAAGTGCCCTCGTTGCGACTCTTCCAACACCAAATTTTGTTATTACAATAACTACAGCCTTTCACAGCCTCGTTACTTTTGTAAGTCTTGTCGACGCTACTGGACTCATGGCGGCACTCTCCGTAACGTACCCATCGGTGGTGGCTCCAGAAAATCCAAGCGCCCTAAGTCCACATTATTGCCTTCCTCTTCTTCTTCTTCCGACACCACCACCACCCTAACTCCGCCACCGCCCGGAGGATCAGGACCTCTTGATCTTGCAACTTCTTCTTATAATTCTAGTGCTGCCTTTTTGTCATCCTTGGATGTGGGGGCTGCTTATAGTTCATTTGGAGGATTGGCTTGGACTACTGCTACTCCCATCAACAACACAATTATTACTAATAATCACTCTTCCTCTTCAGGTAATAACCAAAATTCTAGCTTTCAAATTGAAAATAGTTCTTCTACTTTGATCCCAAATCATCTCTCTCCCTTTCATCATCCCGAGTAG MQGAPNEDQTKASTIIQKQKCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKSTLLPSSSSSSDTTTTLTPPPPGGSGPLDLATSSYNSSAAFLSSLDVGAAYSSFGGLAWTTATPINNTIITNNHSSSSGNNQNSSFQIENSSSTLIPNHLSPFHHPE* Homology
BLAST of CsGy1G012250 vs. ExPASy Swiss-Prot
Match: B9F1L8 (Dof zinc finger protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF2 PE=2 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 4.3e-26 Identity = 58/96 (60.42%), Postives = 77/96 (80.21%), Query Frame = 0
BLAST of CsGy1G012250 vs. ExPASy Swiss-Prot
Match: Q9SVC5 (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 5.6e-26 Identity = 61/89 (68.54%), Postives = 69/89 (77.53%), Query Frame = 0
BLAST of CsGy1G012250 vs. ExPASy Swiss-Prot
Match: O24463 (Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.6e-25 Identity = 59/88 (67.05%), Postives = 67/88 (76.14%), Query Frame = 0
BLAST of CsGy1G012250 vs. ExPASy Swiss-Prot
Match: Q6Z345 (Dof zinc finger protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF4 PE=2 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 8.0e-25 Identity = 70/143 (48.95%), Postives = 89/143 (62.24%), Query Frame = 0
BLAST of CsGy1G012250 vs. ExPASy Swiss-Prot
Match: Q9FM03 (Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana OX=3702 GN=DOF5.6 PE=2 SV=2) HSP 1 Score: 114.0 bits (284), Expect = 1.8e-24 Identity = 63/126 (50.00%), Postives = 84/126 (66.67%), Query Frame = 0
BLAST of CsGy1G012250 vs. NCBI nr
Match: XP_011653263.1 (dof zinc finger protein 4 [Cucumis sativus] >KGN64691.1 hypothetical protein Csa_013133 [Cucumis sativus]) HSP 1 Score: 357 bits (915), Expect = 5.80e-124 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of CsGy1G012250 vs. NCBI nr
Match: XP_008442727.1 (PREDICTED: dof zinc finger protein DOF2.2-like [Cucumis melo] >KAA0057001.1 dof zinc finger protein DOF2.2-like [Cucumis melo var. makuwa] >TYK26428.1 dof zinc finger protein DOF2.2-like [Cucumis melo var. makuwa]) HSP 1 Score: 335 bits (860), Expect = 1.41e-115 Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 0
BLAST of CsGy1G012250 vs. NCBI nr
Match: XP_038876987.1 (dof zinc finger protein 4-like [Benincasa hispida]) HSP 1 Score: 255 bits (652), Expect = 5.11e-84 Identity = 140/181 (77.35%), Postives = 150/181 (82.87%), Query Frame = 0
BLAST of CsGy1G012250 vs. NCBI nr
Match: KAG6583987.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 148 bits (374), Expect = 8.82e-42 Identity = 98/185 (52.97%), Postives = 117/185 (63.24%), Query Frame = 0
BLAST of CsGy1G012250 vs. NCBI nr
Match: KAG7019610.1 (Dof zinc finger protein DOF3.5, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 145 bits (367), Expect = 1.01e-40 Identity = 97/185 (52.43%), Postives = 116/185 (62.70%), Query Frame = 0
BLAST of CsGy1G012250 vs. ExPASy TrEMBL
Match: A0A0A0LXF4 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G074960 PE=4 SV=1) HSP 1 Score: 357 bits (915), Expect = 2.81e-124 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of CsGy1G012250 vs. ExPASy TrEMBL
Match: A0A5A7UU19 (Dof zinc finger protein DOF2.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00920 PE=4 SV=1) HSP 1 Score: 335 bits (860), Expect = 6.83e-116 Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 0
BLAST of CsGy1G012250 vs. ExPASy TrEMBL
Match: A0A1S3B6E2 (dof zinc finger protein DOF2.2-like OS=Cucumis melo OX=3656 GN=LOC103486513 PE=4 SV=1) HSP 1 Score: 335 bits (860), Expect = 6.83e-116 Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 0
BLAST of CsGy1G012250 vs. ExPASy TrEMBL
Match: A0A6J1EG92 (dof zinc finger protein DOF5.3-like OS=Cucurbita moschata OX=3662 GN=LOC111434062 PE=4 SV=1) HSP 1 Score: 144 bits (364), Expect = 1.39e-40 Identity = 95/189 (50.26%), Postives = 111/189 (58.73%), Query Frame = 0
BLAST of CsGy1G012250 vs. ExPASy TrEMBL
Match: A0A6J1KNK3 (dof zinc finger protein DOF5.3-like OS=Cucurbita maxima OX=3661 GN=LOC111495797 PE=4 SV=1) HSP 1 Score: 135 bits (339), Expect = 5.17e-37 Identity = 93/162 (57.41%), Postives = 105/162 (64.81%), Query Frame = 0
BLAST of CsGy1G012250 vs. TAIR 10
Match: AT3G52440.1 (Dof-type zinc finger DNA-binding family protein ) HSP 1 Score: 119.0 bits (297), Expect = 4.0e-27 Identity = 61/89 (68.54%), Postives = 69/89 (77.53%), Query Frame = 0
BLAST of CsGy1G012250 vs. TAIR 10
Match: AT5G62940.1 (Dof-type zinc finger DNA-binding family protein ) HSP 1 Score: 114.0 bits (284), Expect = 1.3e-25 Identity = 63/126 (50.00%), Postives = 84/126 (66.67%), Query Frame = 0
BLAST of CsGy1G012250 vs. TAIR 10
Match: AT5G60850.1 (OBF binding protein 4 ) HSP 1 Score: 113.2 bits (282), Expect = 2.2e-25 Identity = 61/108 (56.48%), Postives = 73/108 (67.59%), Query Frame = 0
BLAST of CsGy1G012250 vs. TAIR 10
Match: AT1G28310.1 (Dof-type zinc finger DNA-binding family protein ) HSP 1 Score: 112.5 bits (280), Expect = 3.7e-25 Identity = 54/80 (67.50%), Postives = 65/80 (81.25%), Query Frame = 0
BLAST of CsGy1G012250 vs. TAIR 10
Match: AT1G28310.2 (Dof-type zinc finger DNA-binding family protein ) HSP 1 Score: 112.5 bits (280), Expect = 3.7e-25 Identity = 54/80 (67.50%), Postives = 65/80 (81.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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