Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATTTTTTTATTGGGCAAATAAAAAATATATATATATATAATCCCGAAATTCTCATCTTCTTCCCCCCACAAACTCTCCGATTCAGCCGCGTCTCAGCCTCTTCGATCCGCTTCCTCCGCCGATATTCATCAATGGCTCCGTCCTCCAACCTTAGTCGATGGCTGAGGCCTGAGGTAATTAACAATCATTCAGATCTGTCCTCTAATTTTTCTCCGGTTCTGTTTTGTTATTGATTGATCTTCTTTTCCATGCCGTCTAATCATTTCGATCAATTCCATTTTTAGGTTTACCCTCTTTTCGCGGCGGTAGGAGTGGCCGTCGGAATCTGTGGATTTCAGTTAATCCGTAACATCTGCATCAATCCTGAAGTCAGGTCTCTCCTTCTTTCTCTAAACTTTAACTTTTCATTTGTGTTTTTAAGTTCGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGGTTTAATCTGCATATTCTCGTGGTATAAATTTATTATGATTGCAGTTTTGAGGATGAGTAATACTAAGTTTTGAATATAAACCTACCTCTGACCCTTTGCTATCCCTGTGATTAGTTCCAATAGGATGAGTATAGATAATTTGTTCGATTATAATGCATGCTTACTATAAACCAGTGCTTAAATTAATGGATTTAACCAGTCGAATTGTCGATTGCTGTGGCATAGTAACTGCAAAGAATCTTAGGGTTTTTTTTCTTGTAGTTTTTTGCTAACATAGACAGTAGACCTGGCCAAGAAGATATGTCAAGGTGCAAAATTGTTATGAAACTAGTTTCAAATCCCAAACAAACGAAAACGTAAATTACCAAACTCTGCTTGTTGAATTTGACTAGAAATCTGAAAAACCTTATTTTGGTAACCATTTAGTTTTTTGTTTTTAGCTTTTGAAAATTAAACCTACAAACATCTCTGCACCTCTAATTTTCTTGTTTTAAAAAATCAAGCCTTGTTTTTTAAATTTAGCGAAGTATTCAACACAAATTATGAAATTTTTTGAAATATACTTAATTTTAAAAAATAGTGAGGGGTTGTATCACTGTGTGCCCTTGTCAAAAGGGATCGATTGGCTTTGATTGAAATGGGGTATGTTTTGTTTCCTTCATTAAGAGTTCTGTAAACTGATTAGTACATCGTTTTTCTAATCATTCGAGAATCAGAGTTACCAAGGAGAATAGGGCTGCTGGAGTGTTGGATAACTTTGCTGAGGGAGAGAAGTATTCTGAACATTTCCTGAGGAAATTCGTACGCAACAAGTCCCCAGAAATTATGCCATCAATCAACAACTTTTTCACTGACCCAAATCGAAACTAA
mRNA sequence
ATGCATTTTTTTATTGGGCAAATAAAAAATATATATATATATAATCCCGAAATTCTCATCTTCTTCCCCCCACAAACTCTCCGATTCAGCCGCGTCTCAGCCTCTTCGATCCGCTTCCTCCGCCGATATTCATCAATGGCTCCGTCCTCCAACCTTAGTCGATGGCTGAGGCCTGAGGTTTACCCTCTTTTCGCGGCGGTAGGAGTGGCCGTCGGAATCTGTGGATTTCAGTTAATCCGTAACATCTGCATCAATCCTGAAGTCAGAGTTACCAAGGAGAATAGGGCTGCTGGAGTGTTGGATAACTTTGCTGAGGGAGAGAAGTATTCTGAACATTTCCTGAGGAAATTCGTACGCAACAAGTCCCCAGAAATTATGCCATCAATCAACAACTTTTTCACTGACCCAAATCGAAACTAA
Coding sequence (CDS)
ATGCATTTTTTTATTGGGCAAATAAAAAATATATATATATATAATCCCGAAATTCTCATCTTCTTCCCCCCACAAACTCTCCGATTCAGCCGCGTCTCAGCCTCTTCGATCCGCTTCCTCCGCCGATATTCATCAATGGCTCCGTCCTCCAACCTTAGTCGATGGCTGAGGCCTGAGGTTTACCCTCTTTTCGCGGCGGTAGGAGTGGCCGTCGGAATCTGTGGATTTCAGTTAATCCGTAACATCTGCATCAATCCTGAAGTCAGAGTTACCAAGGAGAATAGGGCTGCTGGAGTGTTGGATAACTTTGCTGAGGGAGAGAAGTATTCTGAACATTTCCTGAGGAAATTCGTACGCAACAAGTCCCCAGAAATTATGCCATCAATCAACAACTTTTTCACTGACCCAAATCGAAACTAA
Protein sequence
MHFFIGQIKNIYIYNPEILIFFPPQTLRFSRVSASSIRFLRRYSSMAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN*
Homology
BLAST of CsGy1G008100 vs. NCBI nr
Match:
XP_004152455.2 (uncharacterized protein LOC101218501 isoform X2 [Cucumis sativus])
HSP 1 Score: 284 bits (726), Expect = 1.50e-96
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
Query: 1 MHFFIGQIKNIYIYNPEILIFFPPQTLRFSRVSASSIRFLRRYSSMAPSSNLSRWLRPEV 60
MHFFIGQIKNIYIYNPEILIFFPPQTLRFSRVSASSIRFLRRYSSMAPSSNLSRWLRPEV
Sbjct: 1 MHFFIGQIKNIYIYNPEILIFFPPQTLRFSRVSASSIRFLRRYSSMAPSSNLSRWLRPEV 60
Query: 61 YPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRN 120
YPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRN
Sbjct: 61 YPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRN 120
Query: 121 KSPEIMPSINNFFTDPNRN 139
KSPEIMPSINNFFTDPNRN
Sbjct: 121 KSPEIMPSINNFFTDPNRN 139
BLAST of CsGy1G008100 vs. NCBI nr
Match:
XP_031736912.1 (uncharacterized protein LOC101218501 isoform X1 [Cucumis sativus])
HSP 1 Score: 279 bits (713), Expect = 1.54e-94
Identity = 139/141 (98.58%), Postives = 139/141 (98.58%), Query Frame = 0
Query: 1 MHFFIGQIKNIYIYNPEILIFFPPQTLRFSRVSASSIRFLRRYSSMAPSSNLSRWLRPEV 60
MHFFIGQIKNIYIYNPEILIFFPPQTLRFSRVSASSIRFLRRYSSMAPSSNLSRWLRPEV
Sbjct: 1 MHFFIGQIKNIYIYNPEILIFFPPQTLRFSRVSASSIRFLRRYSSMAPSSNLSRWLRPEV 60
Query: 61 YPLFAAVGVAVGICGFQLIRNICINPEVR--VTKENRAAGVLDNFAEGEKYSEHFLRKFV 120
YPLFAAVGVAVGICGFQLIRNICINPEVR VTKENRAAGVLDNFAEGEKYSEHFLRKFV
Sbjct: 61 YPLFAAVGVAVGICGFQLIRNICINPEVRIRVTKENRAAGVLDNFAEGEKYSEHFLRKFV 120
Query: 121 RNKSPEIMPSINNFFTDPNRN 139
RNKSPEIMPSINNFFTDPNRN
Sbjct: 121 RNKSPEIMPSINNFFTDPNRN 141
BLAST of CsGy1G008100 vs. NCBI nr
Match:
KGN64280.1 (hypothetical protein Csa_013651 [Cucumis sativus])
HSP 1 Score: 197 bits (500), Expect = 1.00e-62
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
Query: 46 MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAE 105
MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAE
Sbjct: 1 MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAE 60
Query: 106 GEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN 139
GEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
Sbjct: 61 GEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN 94
BLAST of CsGy1G008100 vs. NCBI nr
Match:
XP_038893556.1 (uncharacterized protein LOC120082448 [Benincasa hispida])
HSP 1 Score: 192 bits (487), Expect = 9.63e-61
Identity = 90/94 (95.74%), Postives = 94/94 (100.00%), Query Frame = 0
Query: 46 MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAE 105
MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRV+KENRAAGVLDNFAE
Sbjct: 1 MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRAAGVLDNFAE 60
Query: 106 GEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN 139
GEKY+EHFLRKFVRNKSPEIMPSINNFFTDP+RN
Sbjct: 61 GEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN 94
BLAST of CsGy1G008100 vs. NCBI nr
Match:
XP_008437938.1 (PREDICTED: uncharacterized protein LOC103483212 [Cucumis melo] >KAA0055200.1 uncharacterized protein E6C27_scaffold80G00410 [Cucumis melo var. makuwa] >TYJ99130.1 uncharacterized protein E5676_scaffold248G003360 [Cucumis melo var. makuwa])
HSP 1 Score: 191 bits (485), Expect = 1.94e-60
Identity = 91/94 (96.81%), Postives = 93/94 (98.94%), Query Frame = 0
Query: 46 MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAE 105
MAPSS LSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRV+KENRAAGVLDNFAE
Sbjct: 1 MAPSSTLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAE 60
Query: 106 GEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN 139
GEKYSEHFLRKFVRNKSPEIMPSINNFFTDP+RN
Sbjct: 61 GEKYSEHFLRKFVRNKSPEIMPSINNFFTDPSRN 94
BLAST of CsGy1G008100 vs. ExPASy TrEMBL
Match:
A0A0A0LQT3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045780 PE=4 SV=1)
HSP 1 Score: 197 bits (500), Expect = 4.86e-63
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
Query: 46 MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAE 105
MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAE
Sbjct: 1 MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAE 60
Query: 106 GEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN 139
GEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
Sbjct: 61 GEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN 94
BLAST of CsGy1G008100 vs. ExPASy TrEMBL
Match:
A0A5A7UIX5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003360 PE=4 SV=1)
HSP 1 Score: 191 bits (485), Expect = 9.40e-61
Identity = 91/94 (96.81%), Postives = 93/94 (98.94%), Query Frame = 0
Query: 46 MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAE 105
MAPSS LSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRV+KENRAAGVLDNFAE
Sbjct: 1 MAPSSTLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAE 60
Query: 106 GEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN 139
GEKYSEHFLRKFVRNKSPEIMPSINNFFTDP+RN
Sbjct: 61 GEKYSEHFLRKFVRNKSPEIMPSINNFFTDPSRN 94
BLAST of CsGy1G008100 vs. ExPASy TrEMBL
Match:
A0A1S3AVT0 (uncharacterized protein LOC103483212 OS=Cucumis melo OX=3656 GN=LOC103483212 PE=4 SV=1)
HSP 1 Score: 191 bits (485), Expect = 9.40e-61
Identity = 91/94 (96.81%), Postives = 93/94 (98.94%), Query Frame = 0
Query: 46 MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAE 105
MAPSS LSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRV+KENRAAGVLDNFAE
Sbjct: 1 MAPSSTLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAE 60
Query: 106 GEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN 139
GEKYSEHFLRKFVRNKSPEIMPSINNFFTDP+RN
Sbjct: 61 GEKYSEHFLRKFVRNKSPEIMPSINNFFTDPSRN 94
BLAST of CsGy1G008100 vs. ExPASy TrEMBL
Match:
A0A6J1E888 (uncharacterized protein LOC111431708 OS=Cucurbita moschata OX=3662 GN=LOC111431708 PE=4 SV=1)
HSP 1 Score: 182 bits (463), Expect = 2.06e-57
Identity = 87/94 (92.55%), Postives = 93/94 (98.94%), Query Frame = 0
Query: 46 MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAE 105
MAPS+ ++RWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRVTKENRAAGVLDNFAE
Sbjct: 1 MAPST-VNRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAE 60
Query: 106 GEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN 139
GEKY+EHFLRKFVRNKSPEIMPSINNFFTDP+RN
Sbjct: 61 GEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN 93
BLAST of CsGy1G008100 vs. ExPASy TrEMBL
Match:
A0A6J1C941 (uncharacterized protein LOC111009092 OS=Momordica charantia OX=3673 GN=LOC111009092 PE=4 SV=1)
HSP 1 Score: 181 bits (459), Expect = 8.37e-57
Identity = 86/94 (91.49%), Postives = 93/94 (98.94%), Query Frame = 0
Query: 46 MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAE 105
MAPS+ +SRWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRV+KENR+AGVLDNFAE
Sbjct: 1 MAPST-VSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVSKENRSAGVLDNFAE 60
Query: 106 GEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN 139
GEKY+EHFLRKFVRNKSPEIMPSINNFFTDP+RN
Sbjct: 61 GEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN 93
BLAST of CsGy1G008100 vs. TAIR 10
Match:
AT3G48140.1 (B12D protein )
HSP 1 Score: 149.4 bits (376), Expect = 2.1e-36
Identity = 70/84 (83.33%), Postives = 73/84 (86.90%), Query Frame = 0
Query: 53 SRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEH 112
SRWLRPEVYPLFAA GVAVGIC F LIRNI NPEVR TKENRAAG+LDN AEGEKY E+
Sbjct: 3 SRWLRPEVYPLFAATGVAVGICAFSLIRNITGNPEVRCTKENRAAGILDNHAEGEKYKEN 62
Query: 113 FLRKFVRNKSPEIMPSINNFFTDP 137
FLRKFVRNK PEIMP +N FFTDP
Sbjct: 63 FLRKFVRNKKPEIMPGLNKFFTDP 86
BLAST of CsGy1G008100 vs. TAIR 10
Match:
AT3G29970.1 (B12D protein )
HSP 1 Score: 101.3 bits (251), Expect = 6.5e-22
Identity = 41/83 (49.40%), Postives = 60/83 (72.29%), Query Frame = 0
Query: 52 LSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSE 111
+ RW+RPEVYPL A+G + FQL RN +NP+ R+ KE+R G+L+N EGEKY++
Sbjct: 1 MGRWVRPEVYPLLGAMGFVTSMVVFQLTRNAFLNPDCRINKEHRKMGILENKDEGEKYAQ 60
Query: 112 HFLRKFVRNKSPEIMPSINNFFT 135
H RK++R + P++MPS+N FF+
Sbjct: 61 HNFRKYLRTRQPQVMPSLNRFFS 83
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_004152455.2 | 1.50e-96 | 100.00 | uncharacterized protein LOC101218501 isoform X2 [Cucumis sativus] | [more] |
XP_031736912.1 | 1.54e-94 | 98.58 | uncharacterized protein LOC101218501 isoform X1 [Cucumis sativus] | [more] |
KGN64280.1 | 1.00e-62 | 100.00 | hypothetical protein Csa_013651 [Cucumis sativus] | [more] |
XP_038893556.1 | 9.63e-61 | 95.74 | uncharacterized protein LOC120082448 [Benincasa hispida] | [more] |
XP_008437938.1 | 1.94e-60 | 96.81 | PREDICTED: uncharacterized protein LOC103483212 [Cucumis melo] >KAA0055200.1 unc... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LQT3 | 4.86e-63 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045780 PE=4 SV=1 | [more] |
A0A5A7UIX5 | 9.40e-61 | 96.81 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3AVT0 | 9.40e-61 | 96.81 | uncharacterized protein LOC103483212 OS=Cucumis melo OX=3656 GN=LOC103483212 PE=... | [more] |
A0A6J1E888 | 2.06e-57 | 92.55 | uncharacterized protein LOC111431708 OS=Cucurbita moschata OX=3662 GN=LOC1114317... | [more] |
A0A6J1C941 | 8.37e-57 | 91.49 | uncharacterized protein LOC111009092 OS=Momordica charantia OX=3673 GN=LOC111009... | [more] |