CsGy1G008080 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G008080
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionCytochrome c oxidase assembly protein
LocationGy14Chr1: 5113390 .. 5115487 (+)
RNA-Seq ExpressionCsGy1G008080
SyntenyCsGy1G008080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAATATTGTTTTCTTTTTGTCCTCCACATTTATGTTTATTGTTGTCCTGAAAAGGTCGTTTGAGAATCAAAACGACGTCGCCGAAAGGGTTCTTGCCATTTCCTTTTCTATGCAAATCAAGGCCGCACAGCTCAGTTCTTCTCGGGAGCGGTGAGGTCGGCGACGATCAAAGCTTGGCTGAAGATTCCAACGGCCGTGAACGGAGAAACGTTGAAGTCTCGGTGAAATGGGAGCAGCGAGTAAAGCGGGCGATTGGGCGTTCAAGGCCTTTACTGCCGGTCTCGGTGTCGCCACCATTTATCTCACTGCTACTTTCTCAGTCAACGTCTACAGAGGATTGTCTTGGCACAAAGCTCAATCCGTAATATTTCTCTACTTCGCTTTATGCATTTTTTGATTGATGCCCCTGCGTATAGCTTATTGTTCATAATTCCATTCCTTCTTTTATCAAATGATGTTTAGTTTTTAGTTCTTAGCTAATTTATCGCGTTTTTAGTAATTCGGACTGAATTTCGACATTGGAATTTGGGGTTGAGCCAAAACTTCGTGATTGGTCCAAATCAATTGTTGGAATTAATAGATGATGTGGGGAACTTATTGAAGTGAGTATTGACGATTATGGTGTAAGTTGTTAGGTTCTGAATGTTTCGTTCTCATCATTTGTTGGAAGCAGCTAATCAGCATAATCTTAATACTTGAACGAGGGAAATGATCTTTGTTATATCAACATCGAATCCAAAGCTTAAGTGGGTGGGTTCCTGTAAATTTAGTTATATCTTTACTTTACACTCCCTATCCTTGTGAGTTTGAAAAATTGTAGGAGGTTCAACAAATAAAGTGGATGTTAGTTGGAGAGGAAATGATGTTGCACGAATCACCCTTTTAACTAAAAAGCTTAAACTGATGGATTACAATAAATTTAATTATATCTATCTTTTAACAATCCTCTTCTGTTTTAGGACTGAATTTGTGTAGTATGAATTGCAGAATTGAGTTTTTGTTTAGTGAGAAAGTTAATCTATGGTGGATTTTACTCTTTCTAGTGCGTTCCGTTGTATTGGTGCAAATCTAAGCAACCTTTTAATCATTTGAGTCTTTCTTATTTAGTTTCCAATTGGGAATCTCTTTGTTTACCTTTTTAGATGCATTGGGGTGTTTCCCCTTTCTTTTCTAAAAAAAACAAAAAAAGAACGTTAATATATGGTTGTAAGATGAATCAGTATTCAGTGTGATTCTAATAATTTCGTATGGGGAATTAGTAAACCGATACTTCGGAATAATAACTCTTAGTTTGCGGTAACTAAATCTACATGCTTGACAAGACTTTTCAAAGTTTAAGTCAACCTTTGACTTGCTCGAATTTCATGGTTACCTTAATCTGGACTTTGTGCTACTTATTTGAGGATTTCTGGTGATAAGATAAGAACTTATTGTCTTCCTCTATAGGAAAAGCTTAAGCAATGCCTCTTGACTATCTGGTTTCATGGACTTTCAGTTTTGCTATCATTCATCTGCCTTAACACATCATTCTCTAATAATGTTTGTTAGATACTTCATTGGTATTTAAGCACATTCAAGATTCAGAGGTCTGCAAAATATTTGCATCATGATACCTCTTGAAGGACTAAAAGGGTCGTGGCTTCTTTTTGTGCAGAAAATCAACAATGACAATACAAATGAAGAGGCTACATAGTTTGGATTTTCGAGACACGGAACATCTGCAAGTTCAACGTTTTTATTTTTTTGTCTTCAAATTTTGTATGATCAGGTTCTAAATTGATTTCAATGCTTCACTTTATACCTTATCTTTCATGGGAAGAGCAGGAGACTTTCTTTTTGGATATCTAGCATAATTTGGTTATTGTATTAAGGGCATTATTCATACAAGGTCAGCAATTTACTGCAGATCATTTCAACTATTCTAATTGGAATGGCCTTATGTGCCTTCTGATGTAGTTTTTTCTTATTCCATACTTTTGTTGTTTATCATTTGATCTTTTTTTATCCATGTGTTGCATCTCATTGCAATGTATAAGATAGAAGATTAGTACCCTATTCGACATAATGGTTGTTGCTCTCTTAAGGAACACTTTTGAG

mRNA sequence

GGAATATTGTTTTCTTTTTGTCCTCCACATTTATGTTTATTGTTGTCCTGAAAAGGTCGTTTGAGAATCAAAACGACGTCGCCGAAAGGGTTCTTGCCATTTCCTTTTCTATGCAAATCAAGGCCGCACAGCTCAGTTCTTCTCGGGAGCGGTGAGGTCGGCGACGATCAAAGCTTGGCTGAAGATTCCAACGGCCGTGAACGGAGAAACGTTGAAGTCTCGGTGAAATGGGAGCAGCGAGTAAAGCGGGCGATTGGGCGTTCAAGGCCTTTACTGCCGGTCTCGGTGTCGCCACCATTTATCTCACTGCTACTTTCTCAGTCAACGTCTACAGAGGATTGTCTTGGCACAAAGCTCAATCCAAAATCAACAATGACAATACAAATGAAGAGGCTACATAGTTTGGATTTTCGAGACACGGAACATCTGCAAGTTCAACGTTTTTATTTTTTTGTCTTCAAATTTTGTATGATCAGGTTCTAAATTGATTTCAATGCTTCACTTTATACCTTATCTTTCATGGGAAGAGCAGGAGACTTTCTTTTTGGATATCTAGCATAATTTGGTTATTGTATTAAGGGCATTATTCATACAAGGTCAGCAATTTACTGCAGATCATTTCAACTATTCTAATTGGAATGGCCTTATGTGCCTTCTGATGTAGTTTTTTCTTATTCCATACTTTTGTTGTTTATCATTTGATCTTTTTTTATCCATGTGTTGCATCTCATTGCAATGTATAAGATAGAAGATTAGTACCCTATTCGACATAATGGTTGTTGCTCTCTTAAGGAACACTTTTGAG

Coding sequence (CDS)

ATGGGAGCAGCGAGTAAAGCGGGCGATTGGGCGTTCAAGGCCTTTACTGCCGGTCTCGGTGTCGCCACCATTTATCTCACTGCTACTTTCTCAGTCAACGTCTACAGAGGATTGTCTTGGCACAAAGCTCAATCCAAAATCAACAATGACAATACAAATGAAGAGGCTACATAG

Protein sequence

MGAASKAGDWAFKAFTAGLGVATIYLTATFSVNVYRGLSWHKAQSKINNDNTNEEAT*
Homology
[Close]
BLAST of CsGy1G008080 vs. NCBI nr
Match: KGN64278.1 (hypothetical protein Csa_014049 [Cucumis sativus])

HSP 1 Score: 115 bits (288), Expect = 2.68e-32
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0 

Query: 1  MGAASKAGDWAFKAFTAGLGVATIYLTATFSVNVYRGLSWHKAQSKINNDNTNEEAT 57
          MGAASKAGDWAFKAFTAGLGVATIYLTATFSVNVYRGLSWHKAQSKINNDNTNEEAT
Sbjct: 1  MGAASKAGDWAFKAFTAGLGVATIYLTATFSVNVYRGLSWHKAQSKINNDNTNEEAT 57

[Close]
BLAST of CsGy1G008080 vs. NCBI nr
Match: PSR96666.1 (Cytochrome c oxidase assembly protein [Actinidia chinensis var. chinensis])

HSP 1 Score: 97.8 bits (242), Expect = 2.76e-25
Identity = 47/55 (85.45%), Postives = 50/55 (90.91%), Query Frame = 0 

Query: 1  MGAASKAGDWAFKAFTAGLGVATIYLTATFSVNVYRGLSWHKAQSKINNDNTNEE 55
          MG ASKAGDWAFKAFTAGLGVATIYL ATFSVNVYRGLSWH AQSKIN D +N++
Sbjct: 1  MGVASKAGDWAFKAFTAGLGVATIYLAATFSVNVYRGLSWHNAQSKINQDGSNDQ 55

[Close]
BLAST of CsGy1G008080 vs. NCBI nr
Match: KAB1209907.1 (hypothetical protein CJ030_MR6G029297 [Morella rubra])

HSP 1 Score: 95.5 bits (236), Expect = 2.33e-24
Identity = 46/56 (82.14%), Postives = 50/56 (89.29%), Query Frame = 0 

Query: 1  MGAASKAGDWAFKAFTAGLGVATIYLTATFSVNVYRGLSWHKAQSKINNDNTNEEA 56
          MG ASKAGDWAFKAFTAGLGVATIYLTATFSVNVYRGL+WH +QSKI    +NE+A
Sbjct: 1  MGIASKAGDWAFKAFTAGLGVATIYLTATFSVNVYRGLAWHNSQSKIEKQGSNEQA 56

[Close]
BLAST of CsGy1G008080 vs. NCBI nr
Match: PKI63162.1 (hypothetical protein CRG98_016347 [Punica granatum])

HSP 1 Score: 93.2 bits (230), Expect = 1.92e-23
Identity = 44/57 (77.19%), Postives = 49/57 (85.96%), Query Frame = 0 

Query: 1  MGAASKAGDWAFKAFTAGLGVATIYLTATFSVNVYRGLSWHKAQSKINNDNTNEEAT 57
          MG ASKAGDWAFKAFTAGLG+AT+YL  TFSVNVYRGLSWH AQSKI   +++E AT
Sbjct: 1  MGLASKAGDWAFKAFTAGLGIATVYLAGTFSVNVYRGLSWHNAQSKIEKQDSSERAT 57

[Close]
BLAST of CsGy1G008080 vs. NCBI nr
Match: KAE8124133.1 (hypothetical protein FH972_019042 [Carpinus fangiana])

HSP 1 Score: 91.7 bits (226), Expect = 7.83e-23
Identity = 44/56 (78.57%), Postives = 48/56 (85.71%), Query Frame = 0 

Query: 1  MGAASKAGDWAFKAFTAGLGVATIYLTATFSVNVYRGLSWHKAQSKINNDNTNEEA 56
          MG ASKAGDWAFKAFTAGLGV TIYLTA+FS NVYRGL+WH AQSKI    +NE+A
Sbjct: 1  MGIASKAGDWAFKAFTAGLGVTTIYLTASFSFNVYRGLAWHNAQSKIEKQGSNEQA 56

[Close]
BLAST of CsGy1G008080 vs. ExPASy TrEMBL
Match: A0A0A0LR55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045760 PE=4 SV=1)

HSP 1 Score: 115 bits (288), Expect = 1.30e-32
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0 

Query: 1  MGAASKAGDWAFKAFTAGLGVATIYLTATFSVNVYRGLSWHKAQSKINNDNTNEEAT 57
          MGAASKAGDWAFKAFTAGLGVATIYLTATFSVNVYRGLSWHKAQSKINNDNTNEEAT
Sbjct: 1  MGAASKAGDWAFKAFTAGLGVATIYLTATFSVNVYRGLSWHKAQSKINNDNTNEEAT 57

[Close]
BLAST of CsGy1G008080 vs. ExPASy TrEMBL
Match: A0A2R6PUD2 (Cytochrome c oxidase assembly protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc26718 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.34e-25
Identity = 47/55 (85.45%), Postives = 50/55 (90.91%), Query Frame = 0 

Query: 1  MGAASKAGDWAFKAFTAGLGVATIYLTATFSVNVYRGLSWHKAQSKINNDNTNEE 55
          MG ASKAGDWAFKAFTAGLGVATIYL ATFSVNVYRGLSWH AQSKIN D +N++
Sbjct: 1  MGVASKAGDWAFKAFTAGLGVATIYLAATFSVNVYRGLSWHNAQSKINQDGSNDQ 55

[Close]
BLAST of CsGy1G008080 vs. ExPASy TrEMBL
Match: A0A6A1VDK9 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR6G029297 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.13e-24
Identity = 46/56 (82.14%), Postives = 50/56 (89.29%), Query Frame = 0 

Query: 1  MGAASKAGDWAFKAFTAGLGVATIYLTATFSVNVYRGLSWHKAQSKINNDNTNEEA 56
          MG ASKAGDWAFKAFTAGLGVATIYLTATFSVNVYRGL+WH +QSKI    +NE+A
Sbjct: 1  MGIASKAGDWAFKAFTAGLGVATIYLTATFSVNVYRGLAWHNSQSKIEKQGSNEQA 56

[Close]
BLAST of CsGy1G008080 vs. ExPASy TrEMBL
Match: A0A2I0K3P3 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_016347 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 9.29e-24
Identity = 44/57 (77.19%), Postives = 49/57 (85.96%), Query Frame = 0 

Query: 1  MGAASKAGDWAFKAFTAGLGVATIYLTATFSVNVYRGLSWHKAQSKINNDNTNEEAT 57
          MG ASKAGDWAFKAFTAGLG+AT+YL  TFSVNVYRGLSWH AQSKI   +++E AT
Sbjct: 1  MGLASKAGDWAFKAFTAGLGIATVYLAGTFSVNVYRGLSWHNAQSKIEKQDSSERAT 57

[Close]
BLAST of CsGy1G008080 vs. ExPASy TrEMBL
Match: A0A5N6RSF1 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_019042 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 3.79e-23
Identity = 44/56 (78.57%), Postives = 48/56 (85.71%), Query Frame = 0 

Query: 1  MGAASKAGDWAFKAFTAGLGVATIYLTATFSVNVYRGLSWHKAQSKINNDNTNEEA 56
          MG ASKAGDWAFKAFTAGLGV TIYLTA+FS NVYRGL+WH AQSKI    +NE+A
Sbjct: 1  MGIASKAGDWAFKAFTAGLGVTTIYLTASFSFNVYRGLAWHNAQSKIEKQGSNEQA 56

The following BLAST results are available for this feature:
BLAST of CsGy1G008080 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy1G008080 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64278.12.68e-32100.00hypothetical protein Csa_014049 [Cucumis sativus][more]
PSR96666.12.76e-2585.45Cytochrome c oxidase assembly protein [Actinidia chinensis var. chinensis][more]
KAB1209907.12.33e-2482.14hypothetical protein CJ030_MR6G029297 [Morella rubra][more]
PKI63162.11.92e-2377.19hypothetical protein CRG98_016347 [Punica granatum][more]
KAE8124133.17.83e-2378.57hypothetical protein FH972_019042 [Carpinus fangiana][more]
BLAST of CsGy1G008080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LR551.30e-32100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045760 PE=4 SV=1[more]
A0A2R6PUD21.34e-2585.45Cytochrome c oxidase assembly protein OS=Actinidia chinensis var. chinensis OX=1... [more]
A0A6A1VDK91.13e-2482.14Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR6G029297 PE=4 SV=1[more]
A0A2I0K3P39.29e-2477.19Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_016347 PE=4 SV=1[more]
A0A5N6RSF13.79e-2378.57Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_019042 PE=4 SV=1[more]
BLAST of CsGy1G008080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR38525OS03G0824500 PROTEINcoord: 1..54

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G008080.1CsGy1G008080.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane