Cp4.1LG20g08700 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG20g08700
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionZinc finger, C3HC4 type family protein
LocationCp4.1LG20: 7150886 .. 7154916 (-)
RNA-Seq ExpressionCp4.1LG20g08700
SyntenyCp4.1LG20g08700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTATTGTGGTCGACTCGTTCAATAATCTGTCCCCAAGAAGCCCTCTTTGTTTCTCGTCCGACGGAAATTCAGCCGTGAAGCTTATGTCACCATGATTTCCATTCTCGCTCAGGTAGCCAAGCTTCCTTGCTCCGATGAACTTTCAGACCTGATTCGATTTCCTTACCGATTTTTGGTGCGGTTTTATCTCACTTTCTTTCATTTTTGGTGGTTTAATTGCAGGAGCGACTGCTTGGTGCTGCATTAGGGAGCGTGTTCGCCGGGGTTGTTGTTTTTGAGCAACGGAAAAGCTTATACGAGTCCATTTCAAAAAACTATCCACCAACTACTCAATCTCCGGTAAGCGTAAATTTCCTTTTCTGTATCTGTAATGATCAACCGTTCCTTGTTTGTGCTTGACCATTGCTTTGAGACAATTACGATGGCCCTGAATTGAAATATATGTGAAAATGTGGATCTATGAACATTTGGAGGAATGAAATTGTCTAATTTTTCTAAATTAGTTTTACTTTTATAAATGTCTGACAATAATATTGATCTAATTATGGGTTGATTTACATAATTTTTTATGTTTTACTTTGTATATCAACTAGTTTTATCTTTTTAAGTTGGAATATTGCTGAAATTTGTTGAAATTTTATCCAAACTTTGTATAAATGTCGACAATAACAGCCCAAACCCAGCTAGTACATATTGTCCTCTTTAGGCTTTTCGTTTCGAGCTTCCCTCAAGGTTTTTAAAACGCGTCTACTAGGGAGAGATTTTCACCCTAAGGAATGTTTTGTTTCTTTCTCCAACCGATGTGGGATCTCACAATCCATCCCCTTGGGGGCCAGTATCCTCGCTGACACACCACCCGGTGTCTGGCTCTCATACCATTTCTAACAAGCCAAAAACCGGACCATGTACCAGCGAGGAGGCTGAGGCCTAAGGGGAGTGGACATGAGGTGGTGTGATAGTAAGGACGCTGGGCCTCGAAGGGGGATGGATTGGGGGGGTTCCACATCGATTGGAGAAGTGAACGAGTGCCTTCGAGGGCGCTAGTCCCGAAGGGGGGTGGATTGTGAGATCCTACATCGATTGGAAAGGAGAACGAAACATTCTTTATAAGAGTATGAAAACCTCTTCCTAGTAGACGCGTTTTAAAAACTTTGAGGGGAAGCCCGAAAGGAATAGCCCAAAGAGGACAATATCTACTAATGGTAGGATTGGGCTATTACAATAAATGTTGAATTCGTCGATGCAAGTTCTATCATCTCTGAATTTATACTTCCATCTAGCTGCTAATCCATTAATCTAATAGCATCCTCTTTGAAACTACTTTAGATGAGAAAACCTGTACTAGCAAAGAAATATGGTCCAGAGTTTTCGCACCTATGGAATAGCGCTGTAGACCAGACATTTGGACCTGTGATTCAGGCTCTCAGTTCACGGGGATGGTGATGCATTGAGAATGGTTTCGTTAGCAATGTATTTAAACACCAATTCATAAAACATGTAAGGAAACAGAATTTTAAATTCTCTCTTTTTAACATTCTAGATTATCAAAGAATTGATGTTATGACTGTGGAACAAAGCCATGAGTATGAAGGCCTTTAAAGCAATAAAAACAAATTATCTTTATTGCTAAACTGTACTTTCGTTTTTCCCATGTATTTCTATGAGAAGCCATGTGTTTAAATTTGTGGACTGCCAGCTCTGAACCCATCCTTTAGTTATCTTCTCTCCCTCCCCCTCACCCCCTATGTAGTCTTGCATTTCTTTAGAATCTGTGTATTCAAAATGGAATATCTGCACGAGTAATTTACCAATGCGTTGCATATTTACATGATGCATCAAGATTGAAGAATTCTGATGCAATGAAAATGCAACCAGTTATACAATGCTAATGCTCATGACTTGATGGCCAATTACTACTGTATAATAAACATTTAAAGGAGATGGTTAACTAGCACCTCTGATTTGTTGCTATGATGAAACACAGTTTTGCAAAAAAGTATCTAACCTTCTTCAGTTTCGTCAAGAACAGAAATCTAATTTCTCAAACTTCCATTTCACACTGGCAACTATGAATTTGATACTAAAGCTGCTATTAATTACTAATATTTCTAGGTTGGAATTTTTGGATTTTAGGTTCTGCTATTTACTAGCCAACAAGAGCAGATTTTTTTTTACTTAATGTTGTTTGGCTAGTTGTTGGCTTAATTTGCTAGGCTATCTAAGATCATGTTATACATTATGTGTATGAAATAGGCCATCTATGCTAATGAACACCATGCATTCTTTGAAAAGCCCTCTGATTGGGTTGATGAGTATTTTTGCTAGAAGTTGGAAGGCTTTGGAAATGATACTATAAGATTGACCGAGGATTTATTTATTTATTTATTTATAATTTTTAAGTTTTTGTTTTGAAACATTTGTGTTTAAGCTAATTTCAGCAATATTCCAACTTAAAAAGAGTATTTACCTAATTACCCCTGATAAAATGTTACATTAGAGAAACTATATTATCGGTGTTCTGGGTATTTTGGTAATTTTGCTCAGCCCTATTGTGGTCGACTCGTTCAATAATCTGTCCCCAAGAAGCCCTCTTTGTTTCTCTTCCGACGGAAATTCAGCCGTGAAGCTTATGTCACCATGATTTCCATTCTCGCTCAGGTAGCCAAGCTTCCTTGCTCCGATGAACTTTCAGACCTGATTCGATTTCCTTACCGATTTTTGGTGCGGTTTAATNTCAGACCTGATTCGATTTCCTTACCGATTTTTGGTGCGGTTTTATCTCACTTTCTTTTCATTTTTGGTGGTTTAATTGCAGGAGCGACTGCTTGGTGCTGCATTGGGGAGCGTGTTCGCCGGGGTTGTTGTTTTTGAGCAACGGAAAAGCTTATACGAGTCCATTTCCAAAAACTATCCACCAACTACTCAATCTCCGGTAAGCGTAAATTTCCTTTTCTGTATCTGTAATGATCAACCGTTCCTTGTTTGTGTTTGACCATTGCTTTGAGACAATTACGATGGCCCTGAATTGAAATATATGTGAAAATGTGGATCTATGAACATTTGGAGGAATGAAATTGTCTAATTTTTCTAAATTAGTTTTACTTTTATAAATGTCTGACAATAATATTGATCTAATTATGGGTTGATTTACATAATTTTTTATGTTTTACTTTGTATATCAACTAGTTTTATCTTTTTAAGTTGGAATATTGCTGAAATTTGTTGAAATTTTATCCAAACTTTGTATAAATGTCGACAATAACAGCCCAAACCCAGCTAGTACATATTGTCCTCTTTAGGCTTTTCGTTTCGAGCTTCCCTCAAGGTTTTTAAAACGCGTCTACTAGGGAGAGATTTTCACCCTAAGGAATGTTTTGTTTCTTTCTCCAACCGATGTGGGATCTCACAATCCATCCCCTTGGGGGCCAGTATCCTCGCTGACACACCACCCGGTGTCTGGCTCTCATACCATTTCTAACAAGCCAAAAACCGGACCATGTACCAGCGAGGAGGCTGAGGCCTAAGGGGAGTGGACATGAGGTGGTGTGATAGTAAGGACGCTGGGCCTCGAAGGGGGATGGATTGGGGGGGTTCCACATCGATTGGAGAAGTGAACGAGTGCCTTCGAGGGCGCTAGTCCCGAAGGGGGGTGGATTGTGAGATCCTACATCGATTGGAAAGGAGAACGAAACATTCTTTATAAGAGTATGAAAACCTCTTCCTAGTAGACGCGTTTTAAAAACTTTGAGGGGAAGCCCGAAAGGAATAGCCCAAAGAGGACAATATCTACTAATGGTAGGATTGGGCTATTACAATAAATGTTGAATTCGTCGATGCAAGTTCTATCATCTCTGAATTTATACTTCCATCTAGCTGCTAATCCATTAATCTAATAGCATCCTCTTTGAAACTACTTTAGATGAGAAAACCTGTACTAGCAAAGAAATATGGTCCAGAGTTTTCGCACCTATGGAATAGCGCTGTAGACCAGACATTTGGACCTGTGATTCAGGCTCTCAGTTCACGGGGA

mRNA sequence

CCTATTGTGGTCGACTCGTTCAATAATCTGTCCCCAAGAAGCCCTCTTTGTTTCTCGTCCGACGGAAATTCAGCCGAGCGACTGCTTGGTGCTGCATTAGGGAGCGTGTTCGCCGGGGTTGTTGTTTTTGAGCAACGGAAAAGCTTATACGAGTCCATTTCAAAAAACTATCCACCAACTACTCAATCTCCGATGAGAAAACCTGTACTAGCAAAGAAATATGGTCCAGAGTTTTCGCACCTATGGAATAGCGCTGTAGACCAGACATTTGGACCTGTGATTCAGGCTCTCAGTTCACGGGGATGCCGTGAAGCTTATGTCACCATGATTTCCATTCTCGCTCAGGAGCGACTGCTTGGTGCTGCATTGGGGAGCGTGTTCGCCGGGGTTGTTGTTTTTGAGCAACGGAAAAGCTTATACGAGTCCATTTCCAAAAACTATCCACCAACTACTCAATCTCCGATGAGAAAACCTGTACTAGCAAAGAAATATGGTCCAGAGTTTTCGCACCTATGGAATAGCGCTGTAGACCAGACATTTGGACCTGTGATTCAGGCTCTCAGTTCACGGGGA

Coding sequence (CDS)

CCTATTGTGGTCGACTCGTTCAATAATCTGTCCCCAAGAAGCCCTCTTTGTTTCTCGTCCGACGGAAATTCAGCCGAGCGACTGCTTGGTGCTGCATTAGGGAGCGTGTTCGCCGGGGTTGTTGTTTTTGAGCAACGGAAAAGCTTATACGAGTCCATTTCAAAAAACTATCCACCAACTACTCAATCTCCGATGAGAAAACCTGTACTAGCAAAGAAATATGGTCCAGAGTTTTCGCACCTATGGAATAGCGCTGTAGACCAGACATTTGGACCTGTGATTCAGGCTCTCAGTTCACGGGGATGCCGTGAAGCTTATGTCACCATGATTTCCATTCTCGCTCAGGAGCGACTGCTTGGTGCTGCATTGGGGAGCGTGTTCGCCGGGGTTGTTGTTTTTGAGCAACGGAAAAGCTTATACGAGTCCATTTCCAAAAACTATCCACCAACTACTCAATCTCCGATGAGAAAACCTGTACTAGCAAAGAAATATGGTCCAGAGTTTTCGCACCTATGGAATAGCGCTGTAGACCAGACATTTGGACCTGTGATTCAGGCTCTCAGTTCACGGGGA

Protein sequence

PIVVDSFNNLSPRSPLCFSSDGNSAERLLGAALGSVFAGVVVFEQRKSLYESISKNYPPTTQSPMRKPVLAKKYGPEFSHLWNSAVDQTFGPVIQALSSRGCREAYVTMISILAQERLLGAALGSVFAGVVVFEQRKSLYESISKNYPPTTQSPMRKPVLAKKYGPEFSHLWNSAVDQTFGPVIQALSSRG
Homology
[Close]
BLAST of Cp4.1LG20g08700 vs. NCBI nr
Match: KAG7019216.1 (hypothetical protein SDJN02_18174, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 171 bits (434), Expect = 9.96e-52
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0 

Query: 103 REAYVTMISILAQERLLGAALGSVFAGVVVFEQRKSLYESISKNYPPTTQSPMRKPVLAK 162
           REAYVTMISILAQERLLGAALGSVFAGVVVFEQRKS+Y SISKNYPPTTQSPMRKPVLAK
Sbjct: 13  REAYVTMISILAQERLLGAALGSVFAGVVVFEQRKSIYNSISKNYPPTTQSPMRKPVLAK 72

Query: 163 KYGPEFSHLWNSAVDQTFGPVIQALSSRG 191
           KYGPEFSHLWNSAVDQTFGPVIQALSSRG
Sbjct: 73  KYGPEFSHLWNSAVDQTFGPVIQALSSRG 101

[Close]
BLAST of Cp4.1LG20g08700 vs. NCBI nr
Match: KAG6583307.1 (General transcription and DNA repair factor IIH subunit TFB1-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 171 bits (434), Expect = 9.87e-50
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0 

Query: 103 REAYVTMISILAQERLLGAALGSVFAGVVVFEQRKSLYESISKNYPPTTQSPMRKPVLAK 162
           REAYVTMISILAQERLLGAALGSVFAGVVVFEQRKS+Y SISKNYPPTTQSPMRKPVLAK
Sbjct: 13  REAYVTMISILAQERLLGAALGSVFAGVVVFEQRKSIYNSISKNYPPTTQSPMRKPVLAK 72

Query: 163 KYGPEFSHLWNSAVDQTFGPVIQALSSRG 191
           KYGPEFSHLWNSAVDQTFGPVIQALSSRG
Sbjct: 73  KYGPEFSHLWNSAVDQTFGPVIQALSSRG 101

[Close]
BLAST of Cp4.1LG20g08700 vs. NCBI nr
Match: XP_023519919.1 (uncharacterized protein LOC111783242 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 162 bits (411), Expect = 1.80e-48
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 109 MISILAQERLLGAALGSVFAGVVVFEQRKSLYESISKNYPPTTQSPMRKPVLAKKYGPEF 168
           MISILAQERLLGAALGSVFAGVVVFEQRKSLYESISKNYPPTTQSPMRKPVLAKKYGPEF
Sbjct: 1   MISILAQERLLGAALGSVFAGVVVFEQRKSLYESISKNYPPTTQSPMRKPVLAKKYGPEF 60

Query: 169 SHLWNSAVDQTFGPVIQALSSRG 191
           SHLWNSAVDQTFGPVIQALSSRG
Sbjct: 61  SHLWNSAVDQTFGPVIQALSSRG 83

[Close]
BLAST of Cp4.1LG20g08700 vs. NCBI nr
Match: XP_022970477.1 (uncharacterized protein LOC111469446 [Cucurbita maxima])

HSP 1 Score: 161 bits (408), Expect = 5.13e-48
Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 109 MISILAQERLLGAALGSVFAGVVVFEQRKSLYESISKNYPPTTQSPMRKPVLAKKYGPEF 168
           MISILAQERLLGAALGSVFAGVVVFEQRKSLY+SISKNYPPTTQSPMRKPVLAKKYGPEF
Sbjct: 1   MISILAQERLLGAALGSVFAGVVVFEQRKSLYDSISKNYPPTTQSPMRKPVLAKKYGPEF 60

Query: 169 SHLWNSAVDQTFGPVIQALSSRG 191
           SHLWNSAVDQTFGPVIQALSSRG
Sbjct: 61  SHLWNSAVDQTFGPVIQALSSRG 83

[Close]
BLAST of Cp4.1LG20g08700 vs. NCBI nr
Match: XP_022964845.1 (uncharacterized protein LOC111464826 [Cucurbita moschata])

HSP 1 Score: 160 bits (404), Expect = 2.08e-47
Identity = 81/83 (97.59%), Postives = 82/83 (98.80%), Query Frame = 0 

Query: 109 MISILAQERLLGAALGSVFAGVVVFEQRKSLYESISKNYPPTTQSPMRKPVLAKKYGPEF 168
           MISILAQERLLGAALGSVFAGVVVFEQRKS+Y SISKNYPPTTQSPMRKPVLAKKYGPEF
Sbjct: 1   MISILAQERLLGAALGSVFAGVVVFEQRKSIYNSISKNYPPTTQSPMRKPVLAKKYGPEF 60

Query: 169 SHLWNSAVDQTFGPVIQALSSRG 191
           SHLWNSAVDQTFGPVIQALSSRG
Sbjct: 61  SHLWNSAVDQTFGPVIQALSSRG 83

[Close]
BLAST of Cp4.1LG20g08700 vs. ExPASy TrEMBL
Match: A0A6J1HZ79 (uncharacterized protein LOC111469446 OS=Cucurbita maxima OX=3661 GN=LOC111469446 PE=4 SV=1)

HSP 1 Score: 161 bits (408), Expect = 2.48e-48
Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 109 MISILAQERLLGAALGSVFAGVVVFEQRKSLYESISKNYPPTTQSPMRKPVLAKKYGPEF 168
           MISILAQERLLGAALGSVFAGVVVFEQRKSLY+SISKNYPPTTQSPMRKPVLAKKYGPEF
Sbjct: 1   MISILAQERLLGAALGSVFAGVVVFEQRKSLYDSISKNYPPTTQSPMRKPVLAKKYGPEF 60

Query: 169 SHLWNSAVDQTFGPVIQALSSRG 191
           SHLWNSAVDQTFGPVIQALSSRG
Sbjct: 61  SHLWNSAVDQTFGPVIQALSSRG 83

[Close]
BLAST of Cp4.1LG20g08700 vs. ExPASy TrEMBL
Match: A0A6J1HLZ5 (uncharacterized protein LOC111464826 OS=Cucurbita moschata OX=3662 GN=LOC111464826 PE=4 SV=1)

HSP 1 Score: 160 bits (404), Expect = 1.01e-47
Identity = 81/83 (97.59%), Postives = 82/83 (98.80%), Query Frame = 0 

Query: 109 MISILAQERLLGAALGSVFAGVVVFEQRKSLYESISKNYPPTTQSPMRKPVLAKKYGPEF 168
           MISILAQERLLGAALGSVFAGVVVFEQRKS+Y SISKNYPPTTQSPMRKPVLAKKYGPEF
Sbjct: 1   MISILAQERLLGAALGSVFAGVVVFEQRKSIYNSISKNYPPTTQSPMRKPVLAKKYGPEF 60

Query: 169 SHLWNSAVDQTFGPVIQALSSRG 191
           SHLWNSAVDQTFGPVIQALSSRG
Sbjct: 61  SHLWNSAVDQTFGPVIQALSSRG 83

[Close]
BLAST of Cp4.1LG20g08700 vs. ExPASy TrEMBL
Match: A0A0A0LXB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G495270 PE=4 SV=1)

HSP 1 Score: 159 bits (403), Expect = 7.36e-47
Identity = 80/86 (93.02%), Postives = 83/86 (96.51%), Query Frame = 0 

Query: 106 YVTMISILAQERLLGAALGSVFAGVVVFEQRKSLYESISKNYPPTTQSPMRKPVLAKKYG 165
           YVTMIS+LAQERLLG ALGSVFAGVVVFEQRKSLY+SIS+NYPP TQSPMRKPVLAKKYG
Sbjct: 51  YVTMISVLAQERLLGFALGSVFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYG 110

Query: 166 PEFSHLWNSAVDQTFGPVIQALSSRG 191
           PEFSHLWN AVDQTFGPVIQALSSRG
Sbjct: 111 PEFSHLWNRAVDQTFGPVIQALSSRG 136

[Close]
BLAST of Cp4.1LG20g08700 vs. ExPASy TrEMBL
Match: A0A5D3BR76 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00590 PE=4 SV=1)

HSP 1 Score: 150 bits (380), Expect = 4.43e-44
Identity = 75/83 (90.36%), Postives = 79/83 (95.18%), Query Frame = 0 

Query: 109 MISILAQERLLGAALGSVFAGVVVFEQRKSLYESISKNYPPTTQSPMRKPVLAKKYGPEF 168
           MIS+LAQERLLG ALGS FAGVVVFEQRKSLY+SIS+NYPP TQSPMRKPVLAKKYGPEF
Sbjct: 1   MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEF 60

Query: 169 SHLWNSAVDQTFGPVIQALSSRG 191
           SHLWN AVDQTFGP+IQALSSRG
Sbjct: 61  SHLWNRAVDQTFGPMIQALSSRG 83

[Close]
BLAST of Cp4.1LG20g08700 vs. ExPASy TrEMBL
Match: A0A1S3C5P6 (uncharacterized protein LOC103497197 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497197 PE=4 SV=1)

HSP 1 Score: 150 bits (380), Expect = 4.43e-44
Identity = 75/83 (90.36%), Postives = 79/83 (95.18%), Query Frame = 0 

Query: 109 MISILAQERLLGAALGSVFAGVVVFEQRKSLYESISKNYPPTTQSPMRKPVLAKKYGPEF 168
           MIS+LAQERLLG ALGS FAGVVVFEQRKSLY+SIS+NYPP TQSPMRKPVLAKKYGPEF
Sbjct: 1   MISVLAQERLLGFALGSAFAGVVVFEQRKSLYQSISENYPPATQSPMRKPVLAKKYGPEF 60

Query: 169 SHLWNSAVDQTFGPVIQALSSRG 191
           SHLWN AVDQTFGP+IQALSSRG
Sbjct: 61  SHLWNRAVDQTFGPMIQALSSRG 83

[Close]
BLAST of Cp4.1LG20g08700 vs. TAIR 10
Match: AT2G28430.1 (unknown protein; Has 28 Blast hits to 28 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 84.0 bits (206), Expect = 1.5e-16
Identity = 45/83 (54.22%), Postives = 55/83 (66.27%), Query Frame = 0 

Query: 109 MISILAQERLLGAALGSVFAGVVVFEQRKSLYESIS-KNYPPTTQSPMRKPVLAKKYGPE 168
           MISILAQERLLG  LGS   G +VFEQRK +++S+S        Q+ +   +  KKY  E
Sbjct: 1   MISILAQERLLGYTLGSALTGFIVFEQRKLIHDSVSDPKSQSIDQAQVSDRIFGKKYRME 60

Query: 169 FSHLWNSAVDQTFGPVIQALSSR 191
           F+ LWN AVDQTF P I+ LSSR
Sbjct: 61  FASLWNKAVDQTFEPAIEYLSSR 83

The following BLAST results are available for this feature:
BLAST of Cp4.1LG20g08700 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG20g08700 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7019216.19.96e-5297.75hypothetical protein SDJN02_18174, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6583307.19.87e-5097.75General transcription and DNA repair factor IIH subunit TFB1-1, partial [Cucurbi... [more]
XP_023519919.11.80e-48100.00uncharacterized protein LOC111783242 [Cucurbita pepo subsp. pepo][more]
XP_022970477.15.13e-4898.80uncharacterized protein LOC111469446 [Cucurbita maxima][more]
XP_022964845.12.08e-4797.59uncharacterized protein LOC111464826 [Cucurbita moschata][more]
BLAST of Cp4.1LG20g08700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HZ792.48e-4898.80uncharacterized protein LOC111469446 OS=Cucurbita maxima OX=3661 GN=LOC111469446... [more]
A0A6J1HLZ51.01e-4797.59uncharacterized protein LOC111464826 OS=Cucurbita moschata OX=3662 GN=LOC1114648... [more]
A0A0A0LXB27.36e-4793.02Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G495270 PE=4 SV=1[more]
A0A5D3BR764.43e-4490.36Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3C5P64.43e-4490.36uncharacterized protein LOC103497197 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of Cp4.1LG20g08700 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G28430.11.5e-1654.22unknown protein; Has 28 Blast hits to 28 proteins in 12 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37720OS10G0481400 PROTEINcoord: 109..191
NoneNo IPR availablePANTHERPTHR37720:SF2OS10G0481400 PROTEINcoord: 109..191
NoneNo IPR availablePANTHERPTHR37720OS10G0481400 PROTEINcoord: 25..101
NoneNo IPR availablePANTHERPTHR37720:SF2OS10G0481400 PROTEINcoord: 25..101

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG20g08700.1Cp4.1LG20g08700.1mRNA