Cp4.1LG20g07400 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCAATTTCACAAATCCGATCACCAAAAGGTAAAAGAACCACCAAAGCCACCGGAGGAAGGTGATCGGAGCAAGGAGGAAGACGGCGGCGGAGAAGCAGTGGATTGTGGTGGAGAGAGCTGCCGAACTCCGACATCTCTCCAACATCGAATTCCCACCGCACGAAGCTACCCGACGACGCCGAGAAAGCGGAAGGTTGCGAGCAAGAGGAAATTTTCAGATCAAAGCTTCTTCGAGGTCGCCGGACGGGGAGAGGTAGAATCCTTGTTTGCCTTATTTTACAGGGTCTCTTCTACCAAAAGAAGATTTACAAATATATAA ATGTCTCAATTTCACAAATCCGATCACCAAAAGGTAAAAGAACCACCAAAGCCACCGGAGGAAGGTGATCGGAGCAAGGAGGAAGACGGCGGCGGAGAAGCAGTGGATTGTGGTGGAGAGAGCTGCCGAACTCCGACATCTCTCCAACATCGAATTCCCACCGCACGAAGCTACCCGACGACGCCGAGAAAGCGGAAGGTTGCGAGCAAGAGGAAATTTTCAGATCAAAGCTTCTTCGAGGTCGCCGGACGGGGAGAGGTAGAATCCTTGTTTGCCTTATTTTACAGGGTCTCTTCTACCAAAAGAAGATTTACAAATATATAA ATGTCTCAATTTCACAAATCCGATCACCAAAAGGTAAAAGAACCACCAAAGCCACCGGAGGAAGGTGATCGGAGCAAGGAGGAAGACGGCGGCGGAGAAGCAGTGGATTGTGGTGGAGAGAGCTGCCGAACTCCGACATCTCTCCAACATCGAATTCCCACCGCACGAAGCTACCCGACGACGCCGAGAAAGCGGAAGGTTGCGAGCAAGAGGAAATTTTCAGATCAAAGCTTCTTCGAGGTCGCCGGACGGGGAGAGGTAGAATCCTTGTTTGCCTTATTTTACAGGGTCTCTTCTACCAAAAGAAGATTTACAAATATATAA MSQFHKSDHQKVKEPPKPPEEGDRSKEEDGGGEAVDCGGESCRTPTSLQHRIPTARSYPTTPRKRKVASKRKFSDQSFFEVAGRGEVESLFALFYRVSSTKRRFTNI Homology
BLAST of Cp4.1LG20g07400 vs. NCBI nr
Match: KAG6583595.1 (hypothetical protein SDJN03_19527, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 203 bits (517), Expect = 1.02e-65 Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of Cp4.1LG20g07400 vs. NCBI nr
Match: KAG7019295.1 (hypothetical protein SDJN02_18255, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 201 bits (510), Expect = 1.19e-64 Identity = 102/107 (95.33%), Postives = 104/107 (97.20%), Query Frame = 0
BLAST of Cp4.1LG20g07400 vs. NCBI nr
Match: KAG6586014.1 (hypothetical protein SDJN03_18747, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037379.1 hypothetical protein SDJN02_01004, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 139 bits (350), Expect = 3.22e-40 Identity = 82/111 (73.87%), Postives = 88/111 (79.28%), Query Frame = 0
BLAST of Cp4.1LG20g07400 vs. NCBI nr
Match: KAA0052125.1 (cyclin-dependent protein kinase inhibitor SMR2 [Cucumis melo var. makuwa] >TYJ98071.1 cyclin-dependent protein kinase inhibitor SMR2 [Cucumis melo var. makuwa]) HSP 1 Score: 133 bits (335), Expect = 6.19e-38 Identity = 78/111 (70.27%), Postives = 87/111 (78.38%), Query Frame = 0
BLAST of Cp4.1LG20g07400 vs. NCBI nr
Match: KAE8652786.1 (hypothetical protein Csa_022878 [Cucumis sativus]) HSP 1 Score: 109 bits (272), Expect = 3.08e-28 Identity = 63/91 (69.23%), Postives = 69/91 (75.82%), Query Frame = 0
BLAST of Cp4.1LG20g07400 vs. ExPASy TrEMBL
Match: A0A5D3BHE9 (Cyclin-dependent protein kinase inhibitor SMR2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold565G00010 PE=4 SV=1) HSP 1 Score: 133 bits (335), Expect = 3.00e-38 Identity = 78/111 (70.27%), Postives = 87/111 (78.38%), Query Frame = 0
BLAST of Cp4.1LG20g07400 vs. ExPASy TrEMBL
Match: A0A0A0LV74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G135270 PE=4 SV=1) HSP 1 Score: 108 bits (269), Expect = 1.85e-28 Identity = 63/90 (70.00%), Postives = 68/90 (75.56%), Query Frame = 0
BLAST of Cp4.1LG20g07400 vs. ExPASy TrEMBL
Match: A0A6A4M587 (Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_02734 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.72e-09 Identity = 35/75 (46.67%), Postives = 42/75 (56.00%), Query Frame = 0
BLAST of Cp4.1LG20g07400 vs. ExPASy TrEMBL
Match: M5W3L3 (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa019744mg PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.75e-09 Identity = 37/73 (50.68%), Postives = 45/73 (61.64%), Query Frame = 0
BLAST of Cp4.1LG20g07400 vs. ExPASy TrEMBL
Match: A0A251NNT8 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G114400 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 4.10e-09 Identity = 37/73 (50.68%), Postives = 45/73 (61.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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