Cp4.1LG20g06860 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTAGATGGTGGTCTGTCATGGGCAGATCAATGGGATTCCAACCCTGACCCAGGCCCTCCACCGTCGTCGGCAGAAAACGGGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGGAGGAGGGGGGATCCTCCTCGTCAGAGAAGAGCATATTTAAGAAGGCAAGCTTGAAGTGGATAAAGGAATTGCGAAAGAAATCTGAGAAATCTTGA ATGGGTTTAGATGGTGGTCTGTCATGGGCAGATCAATGGGATTCCAACCCTGACCCAGGCCCTCCACCGTCGTCGGCAGAAAACGGGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGGAGGAGGGGGGATCCTCCTCGTCAGAGAAGAGCATATTTAAGAAGGCAAGCTTGAAGTGGATAAAGGAATTGCGAAAGAAATCTGAGAAATCTTGA ATGGGTTTAGATGGTGGTCTGTCATGGGCAGATCAATGGGATTCCAACCCTGACCCAGGCCCTCCACCGTCGTCGGCAGAAAACGGGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGGAGGAGGGGGGATCCTCCTCGTCAGAGAAGAGCATATTTAAGAAGGCAAGCTTGAAGTGGATAAAGGAATTGCGAAAGAAATCTGAGAAATCTTGA MGLDGGLSWADQWDSNPDPGPPPSSAENGKKKKKKKKEKEEGGSSSSEKSIFKKASLKWIKELRKKSEKS Homology
BLAST of Cp4.1LG20g06860 vs. NCBI nr
Match: XP_022932206.1 (uncharacterized protein LOC111438527 [Cucurbita moschata] >XP_023519855.1 uncharacterized protein LOC111783185 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 127 bits (320), Expect = 8.20e-37 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
BLAST of Cp4.1LG20g06860 vs. NCBI nr
Match: KAG6583660.1 (hypothetical protein SDJN03_19592, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032466.1 hypothetical protein SDJN02_06514, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 121 bits (304), Expect = 2.40e-34 Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 0
BLAST of Cp4.1LG20g06860 vs. NCBI nr
Match: XP_022970362.1 (uncharacterized protein LOC111469348 [Cucurbita maxima]) HSP 1 Score: 117 bits (292), Expect = 1.42e-32 Identity = 66/70 (94.29%), Postives = 66/70 (94.29%), Query Frame = 0
BLAST of Cp4.1LG20g06860 vs. NCBI nr
Match: KAG7012753.1 (Mitotic spindle checkpoint protein MAD2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 103 bits (256), Expect = 8.55e-25 Identity = 62/71 (87.32%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of Cp4.1LG20g06860 vs. NCBI nr
Match: XP_038892905.1 (uncharacterized protein LOC120081808 [Benincasa hispida]) HSP 1 Score: 69.7 bits (169), Expect = 7.19e-14 Identity = 46/72 (63.89%), Postives = 51/72 (70.83%), Query Frame = 0
BLAST of Cp4.1LG20g06860 vs. ExPASy TrEMBL
Match: A0A6J1EVQ9 (uncharacterized protein LOC111438527 OS=Cucurbita moschata OX=3662 GN=LOC111438527 PE=4 SV=1) HSP 1 Score: 127 bits (320), Expect = 3.97e-37 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
BLAST of Cp4.1LG20g06860 vs. ExPASy TrEMBL
Match: A0A6J1HYV9 (uncharacterized protein LOC111469348 OS=Cucurbita maxima OX=3661 GN=LOC111469348 PE=4 SV=1) HSP 1 Score: 117 bits (292), Expect = 6.87e-33 Identity = 66/70 (94.29%), Postives = 66/70 (94.29%), Query Frame = 0
BLAST of Cp4.1LG20g06860 vs. ExPASy TrEMBL
Match: A0A0A0KVC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G590180 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.82e-14 Identity = 46/72 (63.89%), Postives = 51/72 (70.83%), Query Frame = 0
BLAST of Cp4.1LG20g06860 vs. ExPASy TrEMBL
Match: A0A1S3BE81 (uncharacterized protein LOC103488917 OS=Cucumis melo OX=3656 GN=LOC103488917 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.79e-13 Identity = 44/72 (61.11%), Postives = 51/72 (70.83%), Query Frame = 0
BLAST of Cp4.1LG20g06860 vs. ExPASy TrEMBL
Match: A0A6P4PMA4 (uncharacterized protein LOC108479077 OS=Gossypium arboreum OX=29729 GN=LOC108479077 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.69e-10 Identity = 44/68 (64.71%), Postives = 48/68 (70.59%), Query Frame = 0
BLAST of Cp4.1LG20g06860 vs. TAIR 10
Match: AT1G67670.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24405.1); Has 18 Blast hits to 18 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.4 bits (137), Expect = 5.4e-09 Identity = 38/67 (56.72%), Postives = 44/67 (65.67%), Query Frame = 0
BLAST of Cp4.1LG20g06860 vs. TAIR 10
Match: AT1G24405.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 55.5 bits (132), Expect = 2.1e-08 Identity = 37/67 (55.22%), Postives = 45/67 (67.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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