Cp4.1LG19g06590 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g06590
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	cyclic phosphodiesterase-like
Location	Cp4.1LG19: 7416280 .. 7417097 (+)
RNA-Seq Expression	Cp4.1LG19g06590
Synteny	Cp4.1LG19g06590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAACCCCAAATCCGACCCGATCGAGCCCTGTGAAGGGGAGTTGTATTCGTTGTGGGCTCTTCCTCCAGAAGATGTCGCCACCAAGATCATTTCTCTGATGAGCAGCCTGAGATCCGAGTTTGGCGGCCCCGAATTTGAGCCGCATATCACCGTGGTTGGGGCAATTCGTCTCACCCCTCAGGATGCCCTCAATAAATTCCGATCAGCTTGCGAAGGGGTCAAGGCTTATCAAGCCACCGTGGATCAAGTTTCCATCGGAACCACCTTCTACCAGTGTGTTTTTCTCCTCATTCATCCCACCACCGAGGTGCTTCCCTCTCATCCTTCCGTCTGCATCTCATCGTTTGGGCTTTTGTTATGTTTAATTTTCCTCCTATTCTCTCTGTTTTCTTCTCAGGTGGTGCAGATCAGCTCACATTGCTGCAGCCATTTTGGTTACAACAACTCCACCCGTAAGTTAATTCACATTCAAAATCATGAATTGGGTCTGGTTTTCCCTTTCCTTGGGATTGTTATGAGCATACTGAAAGCTCTTAATGATGATACAAATGGCATTATCCCCCAAATGATCTAATCTAAACACTCCAAGTATATGTGTGTGTATCAGCTTACATGCCGCATTTGAGCCTACTATATGCGAACATATCAGATGAAATGAAGAAGCGGGCGAAGGAAATAGCGGACAAACTGAATGAAGCCGTGAACGGTCTGAAAGTGCCAGTCACTCGACTTGCATTGTACAAAACAGACACAGGCGATGAAACTCTCAAGTCGTGGGAGAAAATTGCAGAGCACGATCTTCCTTCAAGTTAG

mRNA sequence

ATGGCGAACCCCAAATCCGACCCGATCGAGCCCTGTGAAGGGGAGTTGTATTCGTTGTGGGCTCTTCCTCCAGAAGATGTCGCCACCAAGATCATTTCTCTGATGAGCAGCCTGAGATCCGAGTTTGGCGGCCCCGAATTTGAGCCGCATATCACCGTGGTTGGGGCAATTCGTCTCACCCCTCAGGATGCCCTCAATAAATTCCGATCAGCTTGCGAAGGGGTCAAGGCTTATCAAGCCACCGTGGATCAAGTTTCCATCGGAACCACCTTCTACCAGTGTGTTTTTCTCCTCATTCATCCCACCACCGAGGTGGTGCAGATCAGCTCACATTGCTGCAGCCATTTTGGTTACAACAACTCCACCCCTTACATGCCGCATTTGAGCCTACTATATGCGAACATATCAGATGAAATGAAGAAGCGGGCGAAGGAAATAGCGGACAAACTGAATGAAGCCGTGAACGGTCTGAAAGTGCCAGTCACTCGACTTGCATTGTACAAAACAGACACAGGCGATGAAACTCTCAAGTCGTGGGAGAAAATTGCAGAGCACGATCTTCCTTCAAGTTAG

Coding sequence (CDS)

ATGGCGAACCCCAAATCCGACCCGATCGAGCCCTGTGAAGGGGAGTTGTATTCGTTGTGGGCTCTTCCTCCAGAAGATGTCGCCACCAAGATCATTTCTCTGATGAGCAGCCTGAGATCCGAGTTTGGCGGCCCCGAATTTGAGCCGCATATCACCGTGGTTGGGGCAATTCGTCTCACCCCTCAGGATGCCCTCAATAAATTCCGATCAGCTTGCGAAGGGGTCAAGGCTTATCAAGCCACCGTGGATCAAGTTTCCATCGGAACCACCTTCTACCAGTGTGTTTTTCTCCTCATTCATCCCACCACCGAGGTGGTGCAGATCAGCTCACATTGCTGCAGCCATTTTGGTTACAACAACTCCACCCCTTACATGCCGCATTTGAGCCTACTATATGCGAACATATCAGATGAAATGAAGAAGCGGGCGAAGGAAATAGCGGACAAACTGAATGAAGCCGTGAACGGTCTGAAAGTGCCAGTCACTCGACTTGCATTGTACAAAACAGACACAGGCGATGAAACTCTCAAGTCGTGGGAGAAAATTGCAGAGCACGATCTTCCTTCAAGTTAG

Protein sequence

MANPKSDPIEPCEGELYSLWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLTPQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCSHFGYNNSTPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKSWEKIAEHDLPSS

Homology

[Close]

BLAST of Cp4.1LG19g06590 vs. ExPASy Swiss-Prot
Match: O04147 (Cyclic phosphodiesterase OS=Arabidopsis thaliana OX=3702 GN=At4g18930 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.0e-47
Identity = 90/175 (51.43%), Postives = 124/175 (70.86%), Query Frame = 0


Query: 9   IEPCEGELYSLWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLTPQDALNKF 68
           +E  + ++YS+WALP E+   +   LM +LRSEF GP F PH+TV  +  LT  +A   F
Sbjct: 1   MEEVKKDVYSVWALPDEESEPRFKKLMEALRSEFTGPRFVPHVTVAVSAYLTADEAKKMF 60

Query: 69  RSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCSHFGYNNSTPYMPHL 128
            SAC+G+KAY ATVD+VS GT F+QCVFLL+  T EV++   HC +HF  + +TPYMPHL
Sbjct: 61  ESACDGLKAYTATVDRVSTGTFFFQCVFLLLQTTPEVMEAGEHCKNHFNCSTTTPYMPHL 120

Query: 129 SLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKSWEKIA 184
           SLLYA +++E KK A+E A  L+ +++GL   + RLAL KTDT D+TL++WE +A
Sbjct: 121 SLLYAELTEEEKKNAQEKAYTLDSSLDGLSFRLNRLALCKTDTEDKTLETWETVA 175

[Close]

BLAST of Cp4.1LG19g06590 vs. NCBI nr
Match: XP_023518208.1 (cyclic phosphodiesterase-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 390 bits (1001), Expect = 7.87e-137
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MANPKSDPIEPCEGELYSLWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLT 60
           MANPKSDPIEPCEGELYSLWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLT
Sbjct: 1   MANPKSDPIEPCEGELYSLWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLT 60

Query: 61  PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCSHFGYNN 120
           PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCSHFGYNN
Sbjct: 61  PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCSHFGYNN 120

Query: 121 STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKSWE 180
           STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKSWE
Sbjct: 121 STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKSWE 180

Query: 181 KIAEHDLPSS 190
           KIAEHDLPSS
Sbjct: 181 KIAEHDLPSS 190

[Close]

BLAST of Cp4.1LG19g06590 vs. NCBI nr
Match: XP_022926309.1 (cyclic phosphodiesterase-like [Cucurbita moschata])

HSP 1 Score: 382 bits (981), Expect = 8.84e-134
Identity = 186/190 (97.89%), Postives = 187/190 (98.42%), Query Frame = 0


Query: 1   MANPKSDPIEPCEGELYSLWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLT 60
           MANP S PIEPCEGELYS+WALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLT
Sbjct: 1   MANPNSAPIEPCEGELYSVWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLT 60

Query: 61  PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCSHFGYNN 120
           PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCC HFGYNN
Sbjct: 61  PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCGHFGYNN 120

Query: 121 STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKSWE 180
           STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKSWE
Sbjct: 121 STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKSWE 180

Query: 181 KIAEHDLPSS 190
           KIAEHDLPSS
Sbjct: 181 KIAEHDLPSS 190

[Close]

BLAST of Cp4.1LG19g06590 vs. NCBI nr
Match: KAG7026502.1 (Cyclic phosphodiesterase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 378 bits (970), Expect = 4.06e-132
Identity = 184/189 (97.35%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MANPKSDPIEPCEGELYSLWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLT 60
           MANP S PIEPCEGELYS+WALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGA RLT
Sbjct: 1   MANPNSAPIEPCEGELYSVWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGANRLT 60

Query: 61  PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCSHFGYNN 120
           PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCC HFGYNN
Sbjct: 61  PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCGHFGYNN 120

Query: 121 STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKSWE 180
           STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKSWE
Sbjct: 121 STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKSWE 180

Query: 181 KIAEHDLPS 189
           KIAEHDLPS
Sbjct: 181 KIAEHDLPS 189

[Close]

BLAST of Cp4.1LG19g06590 vs. NCBI nr
Match: XP_023003151.1 (cyclic phosphodiesterase-like [Cucurbita maxima])

HSP 1 Score: 377 bits (969), Expect = 5.97e-132
Identity = 184/190 (96.84%), Postives = 186/190 (97.89%), Query Frame = 0


Query: 1   MANPKSDPIEPCEGELYSLWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLT 60
           MANP S PIEPCEGELYS+WALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLT
Sbjct: 1   MANPNSAPIEPCEGELYSVWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLT 60

Query: 61  PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCSHFGYNN 120
           PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCC HFG NN
Sbjct: 61  PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCGHFGCNN 120

Query: 121 STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKSWE 180
           STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVP+TRLALYKTDTGDETLKSWE
Sbjct: 121 STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPLTRLALYKTDTGDETLKSWE 180

Query: 181 KIAEHDLPSS 190
           KIAEHDLPSS
Sbjct: 181 KIAEHDLPSS 190

[Close]

BLAST of Cp4.1LG19g06590 vs. NCBI nr
Match: KAG6594517.1 (Cyclic phosphodiesterase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 378 bits (971), Expect = 8.61e-132
Identity = 184/189 (97.35%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MANPKSDPIEPCEGELYSLWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLT 60
           MANP S PIEPCEGELYS+WALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLT
Sbjct: 1   MANPNSAPIEPCEGELYSVWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLT 60

Query: 61  PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCSHFGYNN 120
           PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCC HFGYNN
Sbjct: 61  PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCGHFGYNN 120

Query: 121 STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKSWE 180
           STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDT DETLKSWE
Sbjct: 121 STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTSDETLKSWE 180

Query: 181 KIAEHDLPS 189
           KIAEHDLPS
Sbjct: 181 KIAEHDLPS 189

[Close]

BLAST of Cp4.1LG19g06590 vs. ExPASy TrEMBL
Match: A0A6J1EEQ8 (cyclic phosphodiesterase-like OS=Cucurbita moschata OX=3662 GN=LOC111433501 PE=4 SV=1)

HSP 1 Score: 382 bits (981), Expect = 4.28e-134
Identity = 186/190 (97.89%), Postives = 187/190 (98.42%), Query Frame = 0


Query: 1   MANPKSDPIEPCEGELYSLWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLT 60
           MANP S PIEPCEGELYS+WALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLT
Sbjct: 1   MANPNSAPIEPCEGELYSVWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLT 60

Query: 61  PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCSHFGYNN 120
           PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCC HFGYNN
Sbjct: 61  PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCGHFGYNN 120

Query: 121 STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKSWE 180
           STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKSWE
Sbjct: 121 STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKSWE 180

Query: 181 KIAEHDLPSS 190
           KIAEHDLPSS
Sbjct: 181 KIAEHDLPSS 190

[Close]

BLAST of Cp4.1LG19g06590 vs. ExPASy TrEMBL
Match: A0A6J1KNB2 (cyclic phosphodiesterase-like OS=Cucurbita maxima OX=3661 GN=LOC111496852 PE=4 SV=1)

HSP 1 Score: 377 bits (969), Expect = 2.89e-132
Identity = 184/190 (96.84%), Postives = 186/190 (97.89%), Query Frame = 0


Query: 1   MANPKSDPIEPCEGELYSLWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLT 60
           MANP S PIEPCEGELYS+WALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLT
Sbjct: 1   MANPNSAPIEPCEGELYSVWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLT 60

Query: 61  PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCSHFGYNN 120
           PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCC HFG NN
Sbjct: 61  PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCGHFGCNN 120

Query: 121 STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKSWE 180
           STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVP+TRLALYKTDTGDETLKSWE
Sbjct: 121 STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPLTRLALYKTDTGDETLKSWE 180

Query: 181 KIAEHDLPSS 190
           KIAEHDLPSS
Sbjct: 181 KIAEHDLPSS 190

[Close]

BLAST of Cp4.1LG19g06590 vs. ExPASy TrEMBL
Match: A0A6J1INY2 (cyclic phosphodiesterase-like OS=Cucurbita maxima OX=3661 GN=LOC111478628 PE=4 SV=1)

HSP 1 Score: 322 bits (824), Expect = 3.95e-110
Identity = 156/192 (81.25%), Postives = 172/192 (89.58%), Query Frame = 0


Query: 1   MANPKSDPIEPCEGE--LYSLWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIR 60
           MANP+S  I+P EGE  +YS+WALPPEDV  +I +LM+SLRSEFGGP+FEPHITVVGAIR
Sbjct: 1   MANPESPTIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTPQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCSHFGY 120
           LT  DALNKFRSACEG+KAYQATVD VS GT FYQCVFLLIHPTT+VV+ SSHCC HFGY
Sbjct: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTQVVETSSHCCGHFGY 120

Query: 121 NNSTPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKS 180
            NSTPYMPHLSLLYANISDE KK+AKE+A+KL+EA+NGL  PVTRLALYKTDTGDETLKS
Sbjct: 121 KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPVTRLALYKTDTGDETLKS 180

Query: 181 WEKIAEHDLPSS 190
           WEKIAE DLPSS
Sbjct: 181 WEKIAEQDLPSS 192

[Close]

BLAST of Cp4.1LG19g06590 vs. ExPASy TrEMBL
Match: A0A6J1EGC1 (cyclic phosphodiesterase-like OS=Cucurbita moschata OX=3662 GN=LOC111433116 PE=4 SV=1)

HSP 1 Score: 318 bits (814), Expect = 1.27e-108
Identity = 155/192 (80.73%), Postives = 172/192 (89.58%), Query Frame = 0


Query: 1   MANPKSDPIEPCEGE--LYSLWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIR 60
           MANP+S PI+P EGE  +YS+WALPPEDV  +I +LM+SLRSEFGGP+FEPHITVVGAIR
Sbjct: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVMARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTPQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCSHFGY 120
           LT  DALNKFRSACEG+KAYQATVD VS GT FYQCVFLLIHPTT+VV+ SSHCC HFGY
Sbjct: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTQVVETSSHCCGHFGY 120

Query: 121 NNSTPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKS 180
            N TPYMPHLSLLYANISDE KK+AKE+A+KL+EA+NGL  P+TRLALYKTDTGDETLKS
Sbjct: 121 KN-TPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDETLKS 180

Query: 181 WEKIAEHDLPSS 190
           WEKIAE DLPSS
Sbjct: 181 WEKIAEQDLPSS 191

[Close]

BLAST of Cp4.1LG19g06590 vs. ExPASy TrEMBL
Match: A0A1S3AYZ1 (cyclic phosphodiesterase-like OS=Cucumis melo OX=3656 GN=LOC103484419 PE=4 SV=1)

HSP 1 Score: 303 bits (776), Expect = 8.13e-103
Identity = 147/192 (76.56%), Postives = 168/192 (87.50%), Query Frame = 0


Query: 1   MANPKSDPIEPCEGE--LYSLWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIR 60
           M NP+S  I+  E E  +YS+WALPPEDV+ +I +LM+SLRSEFGGP+FEPHITVVGAIR
Sbjct: 1   MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTPQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCSHFGY 120
           LT +DALNKF +AC+G+KAYQATVD VS GT FYQCVFLLIHPTTEVV+ SSH C HFG+
Sbjct: 61  LTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLLIHPTTEVVETSSHFCKHFGF 120

Query: 121 NNSTPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKS 180
            NSTPYMPH+SLLYA+ISDE KK+AKEIADKL+EAVNGLK P+TRLAL+KTDT DETLKS
Sbjct: 121 KNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDETLKS 180

Query: 181 WEKIAEHDLPSS 190
           WEKI EHDL SS
Sbjct: 181 WEKIVEHDLSSS 192

[Close]

BLAST of Cp4.1LG19g06590 vs. TAIR 10
Match: AT4G18930.1 (RNA ligase/cyclic nucleotide phosphodiesterase family protein )

HSP 1 Score: 190.3 bits (482), Expect = 1.4e-48
Identity = 90/175 (51.43%), Postives = 124/175 (70.86%), Query Frame = 0


Query: 9   IEPCEGELYSLWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLTPQDALNKF 68
           +E  + ++YS+WALP E+   +   LM +LRSEF GP F PH+TV  +  LT  +A   F
Sbjct: 1   MEEVKKDVYSVWALPDEESEPRFKKLMEALRSEFTGPRFVPHVTVAVSAYLTADEAKKMF 60

Query: 69  RSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCSHFGYNNSTPYMPHL 128
            SAC+G+KAY ATVD+VS GT F+QCVFLL+  T EV++   HC +HF  + +TPYMPHL
Sbjct: 61  ESACDGLKAYTATVDRVSTGTFFFQCVFLLLQTTPEVMEAGEHCKNHFNCSTTTPYMPHL 120

Query: 129 SLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKSWEKIA 184
           SLLYA +++E KK A+E A  L+ +++GL   + RLAL KTDT D+TL++WE +A
Sbjct: 121 SLLYAELTEEEKKNAQEKAYTLDSSLDGLSFRLNRLALCKTDTEDKTLETWETVA 175

[Close]

BLAST of Cp4.1LG19g06590 vs. TAIR 10
Match: AT4G18940.1 (RNA ligase/cyclic nucleotide phosphodiesterase family protein )

HSP 1 Score: 159.1 bits (401), Expect = 3.6e-39
Identity = 78/188 (41.49%), Postives = 121/188 (64.36%), Query Frame = 0


Query: 4   PKSDPIEPCEGELYSLWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAI--RLTP 63
           P++   +  E  +Y++WA+P +DV  ++  LM  LRSEFGGP F+PH+T+VG    +LT 
Sbjct: 12  PQTQEDDEEEKAMYAIWAVPEDDVEDRLQRLMEGLRSEFGGPAFDPHLTLVGPFPYKLTA 71

Query: 64  QDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCSHFGYNNS 123
            +A   F+SACEG K Y ATVDQVS GT+++QC+++ +  T EV+  + H  +HF     
Sbjct: 72  SEAKRMFKSACEGFKVYPATVDQVSAGTSYFQCLYVSLRHTVEVMNAAGHFMAHFKPFTG 131

Query: 124 TPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDETLKSWEK 183
             Y+PH+S+LY ++++  KK+A E A  L+ +++GL   + R+AL+ TD     + SW K
Sbjct: 132 KFYVPHMSILYGDLTEREKKKALEKAYTLDSSLDGLNFKINRVALWITDA---DVGSWVK 191

Query: 184 IAEHDLPS 190
           + EH L S
Sbjct: 192 VDEHTLIS 196

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g06590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04147	2.0e-47	51.43	Cyclic phosphodiesterase OS=Arabidopsis thaliana OX=3702 GN=At4g18930 PE=1 SV=1	[more]

BLAST of Cp4.1LG19g06590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518208.1	7.87e-137	100.00	cyclic phosphodiesterase-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022926309.1	8.84e-134	97.89	cyclic phosphodiesterase-like [Cucurbita moschata]	[more]
KAG7026502.1	4.06e-132	97.35	Cyclic phosphodiesterase, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023003151.1	5.97e-132	96.84	cyclic phosphodiesterase-like [Cucurbita maxima]	[more]
KAG6594517.1	8.61e-132	97.35	Cyclic phosphodiesterase, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG19g06590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EEQ8	4.28e-134	97.89	cyclic phosphodiesterase-like OS=Cucurbita moschata OX=3662 GN=LOC111433501 PE=4...	[more]
A0A6J1KNB2	2.89e-132	96.84	cyclic phosphodiesterase-like OS=Cucurbita maxima OX=3661 GN=LOC111496852 PE=4 S...	[more]
A0A6J1INY2	3.95e-110	81.25	cyclic phosphodiesterase-like OS=Cucurbita maxima OX=3661 GN=LOC111478628 PE=4 S...	[more]
A0A6J1EGC1	1.27e-108	80.73	cyclic phosphodiesterase-like OS=Cucurbita moschata OX=3662 GN=LOC111433116 PE=4...	[more]
A0A1S3AYZ1	8.13e-103	76.56	cyclic phosphodiesterase-like OS=Cucumis melo OX=3656 GN=LOC103484419 PE=4 SV=1	[more]

BLAST of Cp4.1LG19g06590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18930.1	1.4e-48	51.43	RNA ligase/cyclic nucleotide phosphodiesterase family protein	[more]
AT4G18940.1	3.6e-39	41.49	RNA ligase/cyclic nucleotide phosphodiesterase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012386	2',3'-cyclic-nucleotide 3'-phosphodiesterase	PIRSF	PIRSF017903	CPDase_plant	coord: 1..189 e-value: 3.1E-63 score: 210.9
IPR012386	2',3'-cyclic-nucleotide 3'-phosphodiesterase	PFAM	PF07823	CPDase	coord: 18..180 e-value: 2.2E-14 score: 53.6
IPR012386	2',3'-cyclic-nucleotide 3'-phosphodiesterase	PANTHER	PTHR28141	2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE	coord: 13..187
None	No IPR available	GENE3D	3.90.1140.10	Cyclic phosphodiesterase	coord: 11..189 e-value: 6.4E-54 score: 184.3
None	No IPR available	PANTHER	PTHR28141:SF4	CYCLIC PHOSPHODIESTERASE-LIKE	coord: 13..187
IPR009097	Cyclic phosphodiesterase	SUPERFAMILY	55144	LigT-like	coord: 16..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g06590.1	Cp4.1LG19g06590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009187	cyclic nucleotide metabolic process
molecular_function	GO:0004113	2',3'-cyclic-nucleotide 3'-phosphodiesterase activity
molecular_function	GO:0004112	cyclic-nucleotide phosphodiesterase activity