Cp4.1LG19g04910 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAGTAACATATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAACGGTCGAACCTTTCTCCTCACAGAGGCTTCCCATCGCTGAAACGCTATCCTCTCCCTCTCTAGACCTGCAAATCACCAGTAATCTCCATCTCCTTTCTCTCTGCTATTCGGCTTTGGTTCTTCGCCATCAGATTCATGGCCTCCATTACTCATTCAACAAAGCACCTCATTCGTCACACAACAGTTGATTCTCGCCCTTCTATCTTGTCTACTATGGCGTCTCATCCGTCACTGGTTTACGTCGGTTGGAACACACGGCGTCGGCAATTCTCTAAGCTCTCCGGCGTCTCAAGTCCATGCCCTAGGAACATGAACCTTGCGCCTAAGTCTTCGGAGGAGAACACAGATATTTTGCCATCGGAAGATAACCCTGAAGATGGAGTCTCGCTCGGGACCATGAAATTACCTTCGGACATCGACATTGCGAAATTCGAGGTCCTACTCTTCCAGGTAGATCCAAAATTCCTCCCCGTTTCTGTCACGTTTTTGCTTTACAACTTCTATTACCGATGAAGCAAAGGGGGAATTTCATGATCGTTGTGTTTTTTCCCTTCCCCGTTTTGGATTGGAACAGTGGGCCAATAGTCTTTGCCAGGGAGCTAACTTGCCGCTTCCAGTACCTTTGAGGGTGAGTAATGGATTTTCATCCTGCAGGTTCTTGATGTTTAGGATAAACTTCAATACTTAGTTCATTACCTTTCTCATCAAAAGATTTAGGGAAAACTTTTTTTGGTTACAATCAAACAGGTTGACAAAATAGCCAGTGGAGTTAGGCTTGGTTTTATCTCAATTGGAGATGGAAAGACAGAAGTTCTTGTGTATATAGATTGCTTGGTTTTTCCTGCTACTGCCAGCTCTAGCCCAATTTTTCGAGCCATAAGAAATGGACGCTTAAAGGACCAGTCACCTCCCGGTGAACCAAGAATCATGAGGAGTCTTTTGAGTGCTTTGAAAAAATCAGTTGAAATTGCTGTAGTATGAGTTAACTTGCCTTTGTAAATGTGATAAACTTGTGCTATCTTCTGTCATTAGGTGCTGTAAATGCCTGTCAAGTGAAGATCAGACCCTGTTCTCGTTGTTTCTATTAGTTTGATTCTATTTTTATCTTGTTTTTGCTTTAATTTCCATGTTATTAACAATCCAACGTGACTTGAATTAAAGACACAAGTGTTCGAGTTGTATCTAAACCCGATATTCTTAGTCGGTTTACGTGCTTTCTATTGTATACTTTGGATTGACAATTGGAATGAACTTTTCATGAATTTCTTAACCTGAAAGAAGCAGATATGGTGGCTCTGTAGCTGCATGCTGGATGTCTATGGAAGGAAGAACAGTTTGTTTACTTGAGAAAGGCTGTAAATGAGAATCACAGGATCTTGTTATTGATAGCAGCTGTGAGGGTGGATCATCTCAATTTAGACATAAGCTTTGGTCCTAAAGATGCATGATTCCAGGTAATCCCTGTTCATAGTGTTGTTCTGTTGTTGTTTACTTAAGAAAGGCTGTAAATGAGAATCACAGGATCTTGTTATTGATAGCAGCTGTGAGGGTGGATCATCTCAATTTAGACATAAGTTTTGGTCCTAAAGATGCATGATTCCAGGTAATCCTGTTCATAGTGTTGTTCTATTGTTGTTTCTTTGAAATTAAGATGAAATATGATGAAGAAATGAGATATCAATACAGTATCTTGAAGTTTATACAAGGCTATTCATCATGAATCTGATAGTATAGGGAGTAATGAAGTAACCATGAATCCATGACTAAATTTAAAAGTTTATGCTCTCATGAAAAGCCCGAGATGTATTCTGCGATTCGAGTTTTAGTTATTCGGGTGTGTTTCTGAAGTTATTATTCATCTGTATATAGATAGATATAGAACAATAATTTTAGGTATTGAAAAAAAATGGTTCTCTAGCTACTGTGGTGGTCTGTGGGGTAGGGGGAGGTTGGCTAGTGAATGCTGGAATGATAATTTCAATCCCTGTTCTTGTTGGAAGGAATCCAAACTGGCCAAAAGAATGGGGAAGGGATTGGTATTTCTGTGAAGCTGCTGCTGCTGCTGCTGATGCAGCCATGTTGAAGGTACAAAGTGTTCCCATTGAGTTTCCTTCGACTTTTCTAACTCCTTTTAAATCCCAATATCCCTCCCTAACAGAAGAAACTTGCCTGTCGTGATACCGCCGGTGGATATTGTCCGCTTTGGCCTGTTACGTATAGTCATCAGCCTCACAGTTTTAAAACGCGTCTACTAGGGAGAAGTTTCCACACCATTCTAAAGAATGCCTCATTCCTCACTGCAGTCAAGGTGGGATCTCACAATCCACCCCCTTGGGAGTTAGCGTCCTTGCTAGCACACAACTCGGTGTCTAGCTTTGATACCATTGTAACAGTCCAAACCCACTACTAGCAGATATTATCTGTTTTGGCCCGTTATGTATCGAGTCAGCCTCACGGTTTTAAAACGCGTCTGCTAGGGAGAGATTTCTATACTCTTCTAAGGAATGTCTCAGTTCCTCACTCCAATTGATGTGGGATCTCACAATCCACCCCCCTTGGGGGCTAGTGTCTTGGCTGACACACCGCCCGATGTCTGGCTCTGATACCATTGTAACAGCCCAAGTCCACCGCGAGCAGATATTGTCCACCTTGGCCCATTGTGTATCACCGTGGGTCTCACGATTTCAAAGAAGTTTCCACACCCATCTAAGGAATACTTCGTTCCTCTCTCCAACTGATGTAGGATCTCACGGCCTCTCTCTGCCCATCTCTTTGCACCGCCCCGCCCTCCCGAGCTCCTCCAAAGATCCCAAAGCTAGATAGCAAACTGACACTCCGAAAGCGTATACATTTAAATGATCTTTACCCTTTCCATCTCTTTGGTCTATGTTTGAGCTTCTGGAATTCAACGCTACTATCTTCATTCACTTTAAGATCTTTCATCCAAGTTTAAGTTCGACTCAACCTGATCTAAAATTTCCAGATTCTTTTCCTTGTCTTCATAGTTTTTAACCATCACTTACATAATCTTATGGACAGGCTACTTGTCTCGTGCTCGATGTTCTTCGAGTAGCGAACGCTTAAGGGGTCGTTTGTTCGGAACAAAGTTTGCAAGCTTGGACATCGACATCGGATGGGTGAGTTCCTTGATACCCGGACACTCTTATTTTTAATTGTTTAGTTATAATTATTTATAATTAATTCATTAAATAATGAACCAAAGTACTAAATTTGGGATTATAAAAAAGTAATTCATTAATATATGTTTAATCAAATTAACTACAAATATTATTAATTTATTGCAGGAATGATCATTATAATTAATTATTTGTGATAAATTAAAAATTAATTGTTATATTTCTAAAACAGTACATAGTCTTTTATTTTTATTTTTTTTATCATATATTTTTAAATTGTTTTATCAATAATTAATCATAAATATATAAGATTTAGAAGATGTAATATCTTATATTTTGTAAGATCTTCTACAAACATGAAATTATTATTTTATCTATATTTAGTTTTCATTTAATATGATAATATTTGATTTTTCATTATAACACGTGTAATTAATTCTTCAAAATTAGTAAGTTGTGAATTTTGCCTAGTTCTAATATATTTAATAGTAAATAAAAATTAAACTAATAACAATTAATTATCTAAAATTAATCAATAAAATAAAATTGTTGAAATATGAAAATTTGAAATCATCATATATTTTATCTTCAGACATCTTAAACAAAAAAGCTCCAATCGAGTATCTCCCTCTTCTAGCTGCTCTTGACGAGTGCTTAGAACTCAAAAGATGTCTCAATTGTTGAGCGGAAAGGTATAAAATTTTATTTATTTAATTAATTCAAGAATTGTTAAAATTATTATTGTCTCGTATTATGCAGCTGTTATTAGTCTCTCGTCTTTGAATATAATTCCATTAAAAAAAAAAAAAAACTTTAATTTTCTAAGTCAATTATTAAATTCACAAA TTAGTAACATATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAACGGTCGAACCTTTCTCCTCACAGAGGCTTCCCATCGCTGAAACGCTATCCTCTCCCTCTCTAGACCTGCAAATCACCAGTAATCTCCATCTCCTTTCTCTCTGCTATTCGGCTTTGGTTCTTCGCCATCAGATTCATGGCCTCCATTACTCATTCAACAAAGCACCTCATTCGTCACACAACAGTTGATTCTCGCCCTTCTATCTTGTCTACTATGGCGTCTCATCCGTCACTGGTTTACGTCGGTTGGAACACACGGCGTCGGCAATTCTCTAAGCTCTCCGGCGTCTCAAGTCCATGCCCTAGGAACATGAACCTTGCGCCTAAGTCTTCGGAGGAGAACACAGATATTTTGCCATCGGAAGATAACCCTGAAGATGGAGTCTCGCTCGGGACCATGAAATTACCTTCGGACATCGACATTGCGAAATTCGAGGTCCTACTCTTCCAGTGGGCCAATAGTCTTTGCCAGGGAGCTAACTTGCCGCTTCCAGTACCTTTGAGGGTTGACAAAATAGCCAGTGGAGTTAGGCTTGGTTTTATCTCAATTGGAGATGGAAAGACAGAAGTTCTTGTGTATATAGATTGCTTGGTTTTTCCTGCTACTGCCAGCTCTAGCCCAATTTTTCGAGCCATAAGAAATGGACGCTTAAAGGACCAGTCACCTCCCGGTGAACCAAGAATCATGAGGAGTCTTTTGAGTGCTTTGAAAAAATCAGTTGAAATTGCTGTAGTATGAGTTAACTTGCCTTTGTAAATGTGATAAACTTGTGCTATCTTCTGTCATTAGGTGCTGTAAATGCCTGTCAAGTGAAGATCAGACCCTGTTCTCGTTGTTTCTATTAGTTTGATTCTATTTTTATCTTGTTTTTGCTTTAATTTCCATGTTATTAACAATCCAACGTGACTTGAATTAAAGACACAAGTGTTCGAGTTGTATCTAAACCCGATATTCTTAGTCGGTTTACGTGCTTTCTATTGTATACTTTGGATTGACAATTGGAATGAACTTTTCATGAATTTCTTAACCTGAAAGAAGCAGATATGGTGGCTCTGTAGCTGCATGCTGGATGTCTATGGAAGGAAGAACAGTTTGTTTACTTGAGAAAGGCTGTAAATGAGAATCACAGGATCTTGTTATTGATAGCAGCTGTGAGGGTGGATCATCTCAATTTAGACATAAGCTTTGGTCCTAAAGATGCATGATTCCAGCTGTGAGGGTGGATCATCTCAATTTAGACATAAGTTTTGGTCCTAAAGATGCATGATTCCAGGCTACTTGTCTCGTGCTCGATGTTCTTCGAGTAGCGAACGCTTAAGGGGTCGTTTGTTCGGAACAAAGTTTGCAAGCTTGGACATCGACATCGGATGGACATCTTAAACAAAAAAGCTCCAATCGAGTATCTCCCTCTTCTAGCTGCTCTTGACGAGTGCTTAGAACTCAAAAGATGTCTCAATTGTTGAGCGGAAAGGTATAAAATTTTATTTATTTAATTAATTCAAGAATTGTTAAAATTATTATTGTCTCGTATTATGCAGCTGTTATTAGTCTCTCGTCTTTGAATATAATTCCATTAAAAAAAAAAAAAAACTTTAATTTTCTAAGTCAATTATTAAATTCACAAA ATGGCCTCCATTACTCATTCAACAAAGCACCTCATTCGTCACACAACAGTTGATTCTCGCCCTTCTATCTTGTCTACTATGGCGTCTCATCCGTCACTGGTTTACGTCGGTTGGAACACACGGCGTCGGCAATTCTCTAAGCTCTCCGGCGTCTCAAGTCCATGCCCTAGGAACATGAACCTTGCGCCTAAGTCTTCGGAGGAGAACACAGATATTTTGCCATCGGAAGATAACCCTGAAGATGGAGTCTCGCTCGGGACCATGAAATTACCTTCGGACATCGACATTGCGAAATTCGAGGTCCTACTCTTCCAGTGGGCCAATAGTCTTTGCCAGGGAGCTAACTTGCCGCTTCCAGTACCTTTGAGGGTTGACAAAATAGCCAGTGGAGTTAGGCTTGGTTTTATCTCAATTGGAGATGGAAAGACAGAAGTTCTTGTGTATATAGATTGCTTGGTTTTTCCTGCTACTGCCAGCTCTAGCCCAATTTTTCGAGCCATAAGAAATGGACGCTTAAAGGACCAGTCACCTCCCGGTGAACCAAGAATCATGAGGAGTCTTTTGAGTGCTTTGAAAAAATCAGTTGAAATTGCTGTAGTATGA MASITHSTKHLIRHTTVDSRPSILSTMASHPSLVYVGWNTRRRQFSKLSGVSSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAVV Homology
BLAST of Cp4.1LG19g04910 vs. NCBI nr
Match: XP_023517184.1 (uncharacterized protein LOC111781019 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 394 bits (1011), Expect = 5.06e-138 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of Cp4.1LG19g04910 vs. NCBI nr
Match: XP_022962862.1 (uncharacterized protein LOC111463229 [Cucurbita moschata]) HSP 1 Score: 387 bits (995), Expect = 1.39e-135 Identity = 196/200 (98.00%), Postives = 199/200 (99.50%), Query Frame = 0
BLAST of Cp4.1LG19g04910 vs. NCBI nr
Match: XP_022972616.1 (uncharacterized protein LOC111471157 [Cucurbita maxima]) HSP 1 Score: 385 bits (990), Expect = 8.05e-135 Identity = 195/200 (97.50%), Postives = 199/200 (99.50%), Query Frame = 0
BLAST of Cp4.1LG19g04910 vs. NCBI nr
Match: KAG6595177.1 (hypothetical protein SDJN03_11730, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 386 bits (992), Expect = 4.35e-133 Identity = 195/199 (97.99%), Postives = 198/199 (99.50%), Query Frame = 0
BLAST of Cp4.1LG19g04910 vs. NCBI nr
Match: KAG7027193.1 (hypothetical protein SDJN02_11204 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 341 bits (875), Expect = 3.49e-116 Identity = 178/199 (89.45%), Postives = 182/199 (91.46%), Query Frame = 0
BLAST of Cp4.1LG19g04910 vs. ExPASy TrEMBL
Match: A0A6J1HDQ9 (uncharacterized protein LOC111463229 OS=Cucurbita moschata OX=3662 GN=LOC111463229 PE=4 SV=1) HSP 1 Score: 387 bits (995), Expect = 6.74e-136 Identity = 196/200 (98.00%), Postives = 199/200 (99.50%), Query Frame = 0
BLAST of Cp4.1LG19g04910 vs. ExPASy TrEMBL
Match: A0A6J1I6G0 (uncharacterized protein LOC111471157 OS=Cucurbita maxima OX=3661 GN=LOC111471157 PE=4 SV=1) HSP 1 Score: 385 bits (990), Expect = 3.90e-135 Identity = 195/200 (97.50%), Postives = 199/200 (99.50%), Query Frame = 0
BLAST of Cp4.1LG19g04910 vs. ExPASy TrEMBL
Match: A0A5A7SHD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001480 PE=4 SV=1) HSP 1 Score: 301 bits (771), Expect = 9.54e-102 Identity = 154/199 (77.39%), Postives = 169/199 (84.92%), Query Frame = 0
BLAST of Cp4.1LG19g04910 vs. ExPASy TrEMBL
Match: A0A1S3CH91 (uncharacterized protein LOC103500909 OS=Cucumis melo OX=3656 GN=LOC103500909 PE=4 SV=1) HSP 1 Score: 301 bits (771), Expect = 9.54e-102 Identity = 154/199 (77.39%), Postives = 169/199 (84.92%), Query Frame = 0
BLAST of Cp4.1LG19g04910 vs. ExPASy TrEMBL
Match: A0A0A0KFD4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452740 PE=4 SV=1) HSP 1 Score: 300 bits (767), Expect = 3.88e-101 Identity = 154/199 (77.39%), Postives = 170/199 (85.43%), Query Frame = 0
BLAST of Cp4.1LG19g04910 vs. TAIR 10
Match: AT2G36145.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 174.9 bits (442), Expect = 6.6e-44 Identity = 95/153 (62.09%), Postives = 113/153 (73.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|