Cp4.1LG19g04910 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG19g04910
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionAlpha-amylase
LocationCp4.1LG19: 4160115 .. 4164146 (-)
RNA-Seq ExpressionCp4.1LG19g04910
SyntenyCp4.1LG19g04910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAGTAACATATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAACGGTCGAACCTTTCTCCTCACAGAGGCTTCCCATCGCTGAAACGCTATCCTCTCCCTCTCTAGACCTGCAAATCACCAGTAATCTCCATCTCCTTTCTCTCTGCTATTCGGCTTTGGTTCTTCGCCATCAGATTCATGGCCTCCATTACTCATTCAACAAAGCACCTCATTCGTCACACAACAGTTGATTCTCGCCCTTCTATCTTGTCTACTATGGCGTCTCATCCGTCACTGGTTTACGTCGGTTGGAACACACGGCGTCGGCAATTCTCTAAGCTCTCCGGCGTCTCAAGTCCATGCCCTAGGAACATGAACCTTGCGCCTAAGTCTTCGGAGGAGAACACAGATATTTTGCCATCGGAAGATAACCCTGAAGATGGAGTCTCGCTCGGGACCATGAAATTACCTTCGGACATCGACATTGCGAAATTCGAGGTCCTACTCTTCCAGGTAGATCCAAAATTCCTCCCCGTTTCTGTCACGTTTTTGCTTTACAACTTCTATTACCGATGAAGCAAAGGGGGAATTTCATGATCGTTGTGTTTTTTCCCTTCCCCGTTTTGGATTGGAACAGTGGGCCAATAGTCTTTGCCAGGGAGCTAACTTGCCGCTTCCAGTACCTTTGAGGGTGAGTAATGGATTTTCATCCTGCAGGTTCTTGATGTTTAGGATAAACTTCAATACTTAGTTCATTACCTTTCTCATCAAAAGATTTAGGGAAAACTTTTTTTGGTTACAATCAAACAGGTTGACAAAATAGCCAGTGGAGTTAGGCTTGGTTTTATCTCAATTGGAGATGGAAAGACAGAAGTTCTTGTGTATATAGATTGCTTGGTTTTTCCTGCTACTGCCAGCTCTAGCCCAATTTTTCGAGCCATAAGAAATGGACGCTTAAAGGACCAGTCACCTCCCGGTGAACCAAGAATCATGAGGAGTCTTTTGAGTGCTTTGAAAAAATCAGTTGAAATTGCTGTAGTATGAGTTAACTTGCCTTTGTAAATGTGATAAACTTGTGCTATCTTCTGTCATTAGGTGCTGTAAATGCCTGTCAAGTGAAGATCAGACCCTGTTCTCGTTGTTTCTATTAGTTTGATTCTATTTTTATCTTGTTTTTGCTTTAATTTCCATGTTATTAACAATCCAACGTGACTTGAATTAAAGACACAAGTGTTCGAGTTGTATCTAAACCCGATATTCTTAGTCGGTTTACGTGCTTTCTATTGTATACTTTGGATTGACAATTGGAATGAACTTTTCATGAATTTCTTAACCTGAAAGAAGCAGATATGGTGGCTCTGTAGCTGCATGCTGGATGTCTATGGAAGGAAGAACAGTTTGTTTACTTGAGAAAGGCTGTAAATGAGAATCACAGGATCTTGTTATTGATAGCAGCTGTGAGGGTGGATCATCTCAATTTAGACATAAGCTTTGGTCCTAAAGATGCATGATTCCAGGTAATCCCTGTTCATAGTGTTGTTCTGTTGTTGTTTACTTAAGAAAGGCTGTAAATGAGAATCACAGGATCTTGTTATTGATAGCAGCTGTGAGGGTGGATCATCTCAATTTAGACATAAGTTTTGGTCCTAAAGATGCATGATTCCAGGTAATCCTGTTCATAGTGTTGTTCTATTGTTGTTTCTTTGAAATTAAGATGAAATATGATGAAGAAATGAGATATCAATACAGTATCTTGAAGTTTATACAAGGCTATTCATCATGAATCTGATAGTATAGGGAGTAATGAAGTAACCATGAATCCATGACTAAATTTAAAAGTTTATGCTCTCATGAAAAGCCCGAGATGTATTCTGCGATTCGAGTTTTAGTTATTCGGGTGTGTTTCTGAAGTTATTATTCATCTGTATATAGATAGATATAGAACAATAATTTTAGGTATTGAAAAAAAATGGTTCTCTAGCTACTGTGGTGGTCTGTGGGGTAGGGGGAGGTTGGCTAGTGAATGCTGGAATGATAATTTCAATCCCTGTTCTTGTTGGAAGGAATCCAAACTGGCCAAAAGAATGGGGAAGGGATTGGTATTTCTGTGAAGCTGCTGCTGCTGCTGCTGATGCAGCCATGTTGAAGGTACAAAGTGTTCCCATTGAGTTTCCTTCGACTTTTCTAACTCCTTTTAAATCCCAATATCCCTCCCTAACAGAAGAAACTTGCCTGTCGTGATACCGCCGGTGGATATTGTCCGCTTTGGCCTGTTACGTATAGTCATCAGCCTCACAGTTTTAAAACGCGTCTACTAGGGAGAAGTTTCCACACCATTCTAAAGAATGCCTCATTCCTCACTGCAGTCAAGGTGGGATCTCACAATCCACCCCCTTGGGAGTTAGCGTCCTTGCTAGCACACAACTCGGTGTCTAGCTTTGATACCATTGTAACAGTCCAAACCCACTACTAGCAGATATTATCTGTTTTGGCCCGTTATGTATCGAGTCAGCCTCACGGTTTTAAAACGCGTCTGCTAGGGAGAGATTTCTATACTCTTCTAAGGAATGTCTCAGTTCCTCACTCCAATTGATGTGGGATCTCACAATCCACCCCCCTTGGGGGCTAGTGTCTTGGCTGACACACCGCCCGATGTCTGGCTCTGATACCATTGTAACAGCCCAAGTCCACCGCGAGCAGATATTGTCCACCTTGGCCCATTGTGTATCACCGTGGGTCTCACGATTTCAAAGAAGTTTCCACACCCATCTAAGGAATACTTCGTTCCTCTCTCCAACTGATGTAGGATCTCACGGCCTCTCTCTGCCCATCTCTTTGCACCGCCCCGCCCTCCCGAGCTCCTCCAAAGATCCCAAAGCTAGATAGCAAACTGACACTCCGAAAGCGTATACATTTAAATGATCTTTACCCTTTCCATCTCTTTGGTCTATGTTTGAGCTTCTGGAATTCAACGCTACTATCTTCATTCACTTTAAGATCTTTCATCCAAGTTTAAGTTCGACTCAACCTGATCTAAAATTTCCAGATTCTTTTCCTTGTCTTCATAGTTTTTAACCATCACTTACATAATCTTATGGACAGGCTACTTGTCTCGTGCTCGATGTTCTTCGAGTAGCGAACGCTTAAGGGGTCGTTTGTTCGGAACAAAGTTTGCAAGCTTGGACATCGACATCGGATGGGTGAGTTCCTTGATACCCGGACACTCTTATTTTTAATTGTTTAGTTATAATTATTTATAATTAATTCATTAAATAATGAACCAAAGTACTAAATTTGGGATTATAAAAAAGTAATTCATTAATATATGTTTAATCAAATTAACTACAAATATTATTAATTTATTGCAGGAATGATCATTATAATTAATTATTTGTGATAAATTAAAAATTAATTGTTATATTTCTAAAACAGTACATAGTCTTTTATTTTTATTTTTTTTATCATATATTTTTAAATTGTTTTATCAATAATTAATCATAAATATATAAGATTTAGAAGATGTAATATCTTATATTTTGTAAGATCTTCTACAAACATGAAATTATTATTTTATCTATATTTAGTTTTCATTTAATATGATAATATTTGATTTTTCATTATAACACGTGTAATTAATTCTTCAAAATTAGTAAGTTGTGAATTTTGCCTAGTTCTAATATATTTAATAGTAAATAAAAATTAAACTAATAACAATTAATTATCTAAAATTAATCAATAAAATAAAATTGTTGAAATATGAAAATTTGAAATCATCATATATTTTATCTTCAGACATCTTAAACAAAAAAGCTCCAATCGAGTATCTCCCTCTTCTAGCTGCTCTTGACGAGTGCTTAGAACTCAAAAGATGTCTCAATTGTTGAGCGGAAAGGTATAAAATTTTATTTATTTAATTAATTCAAGAATTGTTAAAATTATTATTGTCTCGTATTATGCAGCTGTTATTAGTCTCTCGTCTTTGAATATAATTCCATTAAAAAAAAAAAAAAACTTTAATTTTCTAAGTCAATTATTAAATTCACAAA

mRNA sequence

TTAGTAACATATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAACGGTCGAACCTTTCTCCTCACAGAGGCTTCCCATCGCTGAAACGCTATCCTCTCCCTCTCTAGACCTGCAAATCACCAGTAATCTCCATCTCCTTTCTCTCTGCTATTCGGCTTTGGTTCTTCGCCATCAGATTCATGGCCTCCATTACTCATTCAACAAAGCACCTCATTCGTCACACAACAGTTGATTCTCGCCCTTCTATCTTGTCTACTATGGCGTCTCATCCGTCACTGGTTTACGTCGGTTGGAACACACGGCGTCGGCAATTCTCTAAGCTCTCCGGCGTCTCAAGTCCATGCCCTAGGAACATGAACCTTGCGCCTAAGTCTTCGGAGGAGAACACAGATATTTTGCCATCGGAAGATAACCCTGAAGATGGAGTCTCGCTCGGGACCATGAAATTACCTTCGGACATCGACATTGCGAAATTCGAGGTCCTACTCTTCCAGTGGGCCAATAGTCTTTGCCAGGGAGCTAACTTGCCGCTTCCAGTACCTTTGAGGGTTGACAAAATAGCCAGTGGAGTTAGGCTTGGTTTTATCTCAATTGGAGATGGAAAGACAGAAGTTCTTGTGTATATAGATTGCTTGGTTTTTCCTGCTACTGCCAGCTCTAGCCCAATTTTTCGAGCCATAAGAAATGGACGCTTAAAGGACCAGTCACCTCCCGGTGAACCAAGAATCATGAGGAGTCTTTTGAGTGCTTTGAAAAAATCAGTTGAAATTGCTGTAGTATGAGTTAACTTGCCTTTGTAAATGTGATAAACTTGTGCTATCTTCTGTCATTAGGTGCTGTAAATGCCTGTCAAGTGAAGATCAGACCCTGTTCTCGTTGTTTCTATTAGTTTGATTCTATTTTTATCTTGTTTTTGCTTTAATTTCCATGTTATTAACAATCCAACGTGACTTGAATTAAAGACACAAGTGTTCGAGTTGTATCTAAACCCGATATTCTTAGTCGGTTTACGTGCTTTCTATTGTATACTTTGGATTGACAATTGGAATGAACTTTTCATGAATTTCTTAACCTGAAAGAAGCAGATATGGTGGCTCTGTAGCTGCATGCTGGATGTCTATGGAAGGAAGAACAGTTTGTTTACTTGAGAAAGGCTGTAAATGAGAATCACAGGATCTTGTTATTGATAGCAGCTGTGAGGGTGGATCATCTCAATTTAGACATAAGCTTTGGTCCTAAAGATGCATGATTCCAGCTGTGAGGGTGGATCATCTCAATTTAGACATAAGTTTTGGTCCTAAAGATGCATGATTCCAGGCTACTTGTCTCGTGCTCGATGTTCTTCGAGTAGCGAACGCTTAAGGGGTCGTTTGTTCGGAACAAAGTTTGCAAGCTTGGACATCGACATCGGATGGACATCTTAAACAAAAAAGCTCCAATCGAGTATCTCCCTCTTCTAGCTGCTCTTGACGAGTGCTTAGAACTCAAAAGATGTCTCAATTGTTGAGCGGAAAGGTATAAAATTTTATTTATTTAATTAATTCAAGAATTGTTAAAATTATTATTGTCTCGTATTATGCAGCTGTTATTAGTCTCTCGTCTTTGAATATAATTCCATTAAAAAAAAAAAAAAACTTTAATTTTCTAAGTCAATTATTAAATTCACAAA

Coding sequence (CDS)

ATGGCCTCCATTACTCATTCAACAAAGCACCTCATTCGTCACACAACAGTTGATTCTCGCCCTTCTATCTTGTCTACTATGGCGTCTCATCCGTCACTGGTTTACGTCGGTTGGAACACACGGCGTCGGCAATTCTCTAAGCTCTCCGGCGTCTCAAGTCCATGCCCTAGGAACATGAACCTTGCGCCTAAGTCTTCGGAGGAGAACACAGATATTTTGCCATCGGAAGATAACCCTGAAGATGGAGTCTCGCTCGGGACCATGAAATTACCTTCGGACATCGACATTGCGAAATTCGAGGTCCTACTCTTCCAGTGGGCCAATAGTCTTTGCCAGGGAGCTAACTTGCCGCTTCCAGTACCTTTGAGGGTTGACAAAATAGCCAGTGGAGTTAGGCTTGGTTTTATCTCAATTGGAGATGGAAAGACAGAAGTTCTTGTGTATATAGATTGCTTGGTTTTTCCTGCTACTGCCAGCTCTAGCCCAATTTTTCGAGCCATAAGAAATGGACGCTTAAAGGACCAGTCACCTCCCGGTGAACCAAGAATCATGAGGAGTCTTTTGAGTGCTTTGAAAAAATCAGTTGAAATTGCTGTAGTATGA

Protein sequence

MASITHSTKHLIRHTTVDSRPSILSTMASHPSLVYVGWNTRRRQFSKLSGVSSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPVPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAVV
Homology
[Close]
BLAST of Cp4.1LG19g04910 vs. NCBI nr
Match: XP_023517184.1 (uncharacterized protein LOC111781019 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 394 bits (1011), Expect = 5.06e-138
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 

Query: 1   MASITHSTKHLIRHTTVDSRPSILSTMASHPSLVYVGWNTRRRQFSKLSGVSSPCPRNMN 60
           MASITHSTKHLIRHTTVDSRPSILSTMASHPSLVYVGWNTRRRQFSKLSGVSSPCPRNMN
Sbjct: 1   MASITHSTKHLIRHTTVDSRPSILSTMASHPSLVYVGWNTRRRQFSKLSGVSSPCPRNMN 60

Query: 61  LAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV 120
           LAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV
Sbjct: 61  LAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV 120

Query: 121 PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE 180
           PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE
Sbjct: 121 PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE 180

Query: 181 PRIMRSLLSALKKSVEIAVV 200
           PRIMRSLLSALKKSVEIAVV
Sbjct: 181 PRIMRSLLSALKKSVEIAVV 200

[Close]
BLAST of Cp4.1LG19g04910 vs. NCBI nr
Match: XP_022962862.1 (uncharacterized protein LOC111463229 [Cucurbita moschata])

HSP 1 Score: 387 bits (995), Expect = 1.39e-135
Identity = 196/200 (98.00%), Postives = 199/200 (99.50%), Query Frame = 0 

Query: 1   MASITHSTKHLIRHTTVDSRPSILSTMASHPSLVYVGWNTRRRQFSKLSGVSSPCPRNMN 60
           MA ITHSTKHLIRHTTV+SRPSILSTMASHPSLV+VGWNTRRRQFSKLSG+SSPCPRNMN
Sbjct: 1   MAVITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGISSPCPRNMN 60

Query: 61  LAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV 120
           LAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV
Sbjct: 61  LAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV 120

Query: 121 PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE 180
           PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE
Sbjct: 121 PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE 180

Query: 181 PRIMRSLLSALKKSVEIAVV 200
           PRIMRSLLSALKKSVEIAVV
Sbjct: 181 PRIMRSLLSALKKSVEIAVV 200

[Close]
BLAST of Cp4.1LG19g04910 vs. NCBI nr
Match: XP_022972616.1 (uncharacterized protein LOC111471157 [Cucurbita maxima])

HSP 1 Score: 385 bits (990), Expect = 8.05e-135
Identity = 195/200 (97.50%), Postives = 199/200 (99.50%), Query Frame = 0 

Query: 1   MASITHSTKHLIRHTTVDSRPSILSTMASHPSLVYVGWNTRRRQFSKLSGVSSPCPRNMN 60
           MA+ITHSTKHLIRHTTV+SRPSILSTMASHPSLV+VGWNTRRRQFSKLSGVSSPCPRNM+
Sbjct: 1   MAAITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGVSSPCPRNMS 60

Query: 61  LAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV 120
           LAPKSSEENTDI PSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV
Sbjct: 61  LAPKSSEENTDIFPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV 120

Query: 121 PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE 180
           PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE
Sbjct: 121 PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE 180

Query: 181 PRIMRSLLSALKKSVEIAVV 200
           PRIMRSLLSALKKSVEIAVV
Sbjct: 181 PRIMRSLLSALKKSVEIAVV 200

[Close]
BLAST of Cp4.1LG19g04910 vs. NCBI nr
Match: KAG6595177.1 (hypothetical protein SDJN03_11730, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 386 bits (992), Expect = 4.35e-133
Identity = 195/199 (97.99%), Postives = 198/199 (99.50%), Query Frame = 0 

Query: 1   MASITHSTKHLIRHTTVDSRPSILSTMASHPSLVYVGWNTRRRQFSKLSGVSSPCPRNMN 60
           MA+ITHSTKHLIRHTTV+SRPSILSTMASHPSLV+VGWNTRRRQFSKLSGVSSPCPRNMN
Sbjct: 1   MAAITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGVSSPCPRNMN 60

Query: 61  LAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV 120
           LAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV
Sbjct: 61  LAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV 120

Query: 121 PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE 180
           PLRVDKI SGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE
Sbjct: 121 PLRVDKITSGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE 180

Query: 181 PRIMRSLLSALKKSVEIAV 199
           PRIMRSLLSALKKSVEIAV
Sbjct: 181 PRIMRSLLSALKKSVEIAV 199

[Close]
BLAST of Cp4.1LG19g04910 vs. NCBI nr
Match: KAG7027193.1 (hypothetical protein SDJN02_11204 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 341 bits (875), Expect = 3.49e-116
Identity = 178/199 (89.45%), Postives = 182/199 (91.46%), Query Frame = 0 

Query: 1   MASITHSTKHLIRHTTVDSRPSILSTMASHPSLVYVGWNTRRRQFSKLSGVSSPCPRNMN 60
           MA+ITHSTKHLIRHTTV+SRPSILSTMASHPSLV+VGWNTRRRQFSKLSGVSSPCPRNMN
Sbjct: 1   MAAITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGVSSPCPRNMN 60

Query: 61  LAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV 120
           LAPKSSEENT ILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV
Sbjct: 61  LAPKSSEENTAILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV 120

Query: 121 PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE 180
           PLRVDKI SGVR  F      K       +CLVFPATASSSPIFRAIRNGRLKDQSPPGE
Sbjct: 121 PLRVDKITSGVRTWFYLNWRWKDR-----NCLVFPATASSSPIFRAIRNGRLKDQSPPGE 180

Query: 181 PRIMRSLLSALKKSVEIAV 199
           PRIMRSLLSALKKSVEIAV
Sbjct: 181 PRIMRSLLSALKKSVEIAV 194

[Close]
BLAST of Cp4.1LG19g04910 vs. ExPASy TrEMBL
Match: A0A6J1HDQ9 (uncharacterized protein LOC111463229 OS=Cucurbita moschata OX=3662 GN=LOC111463229 PE=4 SV=1)

HSP 1 Score: 387 bits (995), Expect = 6.74e-136
Identity = 196/200 (98.00%), Postives = 199/200 (99.50%), Query Frame = 0 

Query: 1   MASITHSTKHLIRHTTVDSRPSILSTMASHPSLVYVGWNTRRRQFSKLSGVSSPCPRNMN 60
           MA ITHSTKHLIRHTTV+SRPSILSTMASHPSLV+VGWNTRRRQFSKLSG+SSPCPRNMN
Sbjct: 1   MAVITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGISSPCPRNMN 60

Query: 61  LAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV 120
           LAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV
Sbjct: 61  LAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV 120

Query: 121 PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE 180
           PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE
Sbjct: 121 PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE 180

Query: 181 PRIMRSLLSALKKSVEIAVV 200
           PRIMRSLLSALKKSVEIAVV
Sbjct: 181 PRIMRSLLSALKKSVEIAVV 200

[Close]
BLAST of Cp4.1LG19g04910 vs. ExPASy TrEMBL
Match: A0A6J1I6G0 (uncharacterized protein LOC111471157 OS=Cucurbita maxima OX=3661 GN=LOC111471157 PE=4 SV=1)

HSP 1 Score: 385 bits (990), Expect = 3.90e-135
Identity = 195/200 (97.50%), Postives = 199/200 (99.50%), Query Frame = 0 

Query: 1   MASITHSTKHLIRHTTVDSRPSILSTMASHPSLVYVGWNTRRRQFSKLSGVSSPCPRNMN 60
           MA+ITHSTKHLIRHTTV+SRPSILSTMASHPSLV+VGWNTRRRQFSKLSGVSSPCPRNM+
Sbjct: 1   MAAITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGVSSPCPRNMS 60

Query: 61  LAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV 120
           LAPKSSEENTDI PSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV
Sbjct: 61  LAPKSSEENTDIFPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV 120

Query: 121 PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE 180
           PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE
Sbjct: 121 PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE 180

Query: 181 PRIMRSLLSALKKSVEIAVV 200
           PRIMRSLLSALKKSVEIAVV
Sbjct: 181 PRIMRSLLSALKKSVEIAVV 200

[Close]
BLAST of Cp4.1LG19g04910 vs. ExPASy TrEMBL
Match: A0A5A7SHD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001480 PE=4 SV=1)

HSP 1 Score: 301 bits (771), Expect = 9.54e-102
Identity = 154/199 (77.39%), Postives = 169/199 (84.92%), Query Frame = 0 

Query: 1   MASITHSTKHLIRHTTVDSRPSILSTMASH-PSLVYVGWNTRRRQFSKLSGVSSPCPRNM 60
           M +I++ST    RH  V+SRP +LS M SH PSLV+   NTR RQ S  S  S PC R  
Sbjct: 1   MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRIS 60

Query: 61  NLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLP 120
           NL PKSS+EN DI+PSED+PEDGVSLGTMKLP D DIA+F+VLLFQWANSLCQGANLPLP
Sbjct: 61  NLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLP 120

Query: 121 VPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPG 180
           VPL+VDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPG
Sbjct: 121 VPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPG 180

Query: 181 EPRIMRSLLSALKKSVEIA 198
           EPRIMRSLL ALKKSVEI+
Sbjct: 181 EPRIMRSLLGALKKSVEIS 199

[Close]
BLAST of Cp4.1LG19g04910 vs. ExPASy TrEMBL
Match: A0A1S3CH91 (uncharacterized protein LOC103500909 OS=Cucumis melo OX=3656 GN=LOC103500909 PE=4 SV=1)

HSP 1 Score: 301 bits (771), Expect = 9.54e-102
Identity = 154/199 (77.39%), Postives = 169/199 (84.92%), Query Frame = 0 

Query: 1   MASITHSTKHLIRHTTVDSRPSILSTMASH-PSLVYVGWNTRRRQFSKLSGVSSPCPRNM 60
           M +I++ST    RH  V+SRP +LS M SH PSLV+   NTR RQ S  S  S PC R  
Sbjct: 1   MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRIS 60

Query: 61  NLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLP 120
           NL PKSS+EN DI+PSED+PEDGVSLGTMKLP D DIA+F+VLLFQWANSLCQGANLPLP
Sbjct: 61  NLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLP 120

Query: 121 VPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPG 180
           VPL+VDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPG
Sbjct: 121 VPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPG 180

Query: 181 EPRIMRSLLSALKKSVEIA 198
           EPRIMRSLL ALKKSVEI+
Sbjct: 181 EPRIMRSLLGALKKSVEIS 199

[Close]
BLAST of Cp4.1LG19g04910 vs. ExPASy TrEMBL
Match: A0A0A0KFD4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452740 PE=4 SV=1)

HSP 1 Score: 300 bits (767), Expect = 3.88e-101
Identity = 154/199 (77.39%), Postives = 170/199 (85.43%), Query Frame = 0 

Query: 1   MASITHSTKHLIRHTTVDSRPSILSTMASH-PSLVYVGWNTRRRQFSKLSGVSSPCPRNM 60
           M +I++ST   IR+  V+SRP + S+M SH PSLV+   NTR RQ S  S VS PC R  
Sbjct: 1   MDAISYSTNQFIRYPNVNSRPCVFSSMPSHNPSLVFFASNTRYRQISNFSQVSGPCHRIP 60

Query: 61  NLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLP 120
            L PKSS+EN DI+PSED+PEDGVSLGTMKLP D DIA+F+VLLFQWANSLCQGANLPLP
Sbjct: 61  KLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLP 120

Query: 121 VPLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPG 180
           VPL+VDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPG
Sbjct: 121 VPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPG 180

Query: 181 EPRIMRSLLSALKKSVEIA 198
           EPRIMRSLL ALKKSVEI+
Sbjct: 181 EPRIMRSLLGALKKSVEIS 199

[Close]
BLAST of Cp4.1LG19g04910 vs. TAIR 10
Match: AT2G36145.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 174.9 bits (442), Expect = 6.6e-44
Identity = 95/153 (62.09%), Postives = 113/153 (73.86%), Query Frame = 0 

Query: 49  SGVSSPCPRNMNLAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWAN 108
           +G +SP      +   +S  N  +   E   EDGVSLGTMKLP D D+A+FE LLFQWAN
Sbjct: 37  NGAASPRQVKRAIVANASPGNGGVKAEE---EDGVSLGTMKLPVDTDLARFETLLFQWAN 96

Query: 109 SLCQGANLPLPVPLRVDKIASGVRLGFISIGD-GKTEVLVYIDCLVFPATASSSPIFRAI 168
           SLCQGANLPLPVPL+VD+I+ G RLGFI + D GKT+V VYIDCLVF  T  +  +F+A 
Sbjct: 97  SLCQGANLPLPVPLKVDRISGGARLGFIVMEDEGKTDVPVYIDCLVF-QTTENGVVFQAT 156

Query: 169 RNGRLKDQSPPGEPRIMRSLLSALKKSVEIAVV 201
           RNGR KD++PPGE RIMRSLL ALKK+VEIA V
Sbjct: 157 RNGRKKDKAPPGEERIMRSLLGALKKAVEIARV 185

The following BLAST results are available for this feature:
BLAST of Cp4.1LG19g04910 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG19g04910 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023517184.15.06e-138100.00uncharacterized protein LOC111781019 [Cucurbita pepo subsp. pepo][more]
XP_022962862.11.39e-13598.00uncharacterized protein LOC111463229 [Cucurbita moschata][more]
XP_022972616.18.05e-13597.50uncharacterized protein LOC111471157 [Cucurbita maxima][more]
KAG6595177.14.35e-13397.99hypothetical protein SDJN03_11730, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7027193.13.49e-11689.45hypothetical protein SDJN02_11204 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Cp4.1LG19g04910 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HDQ96.74e-13698.00uncharacterized protein LOC111463229 OS=Cucurbita moschata OX=3662 GN=LOC1114632... [more]
A0A6J1I6G03.90e-13597.50uncharacterized protein LOC111471157 OS=Cucurbita maxima OX=3661 GN=LOC111471157... [more]
A0A5A7SHD09.54e-10277.39Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CH919.54e-10277.39uncharacterized protein LOC103500909 OS=Cucumis melo OX=3656 GN=LOC103500909 PE=... [more]
A0A0A0KFD43.88e-10177.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452740 PE=4 SV=1[more]
BLAST of Cp4.1LG19g04910 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G36145.16.6e-4462.09unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..80
NoneNo IPR availablePANTHERPTHR36352EXPRESSED PROTEINcoord: 6..199

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG19g04910.1Cp4.1LG19g04910.1mRNA