Cp4.1LG19g03670 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g03670
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Homeobox-leucine zipper protein ATHB-22-like
Location	Cp4.1LG19: 3966973 .. 3967722 (-)
RNA-Seq Expression	Cp4.1LG19g03670
Synteny	Cp4.1LG19g03670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATCGTATTCTTAACATCGGGTTTAATGAGCGGTAGAGACAACAGAGACGAAGAGACTGGGCATGGAAGCTCAGGAAAGTAGGGTTGGAGGAGTGGATGAGAAGAAGAAGAGGTTCAGTCGGGATCAATTGGAGTCATTGGAGAGAAGCTTTCAAGAGGAAGTGAAGCTTGAACCTGAGAGAAAAATGAAGCTATCAAAGGAGATTGGACTCCAACCAAGGCAGATAGCGGTGTGGTTCCAGAATAGAAGAGCTCGCTCAAAGGTTAAGCAGCTTCAGCATCTCTATGACACTCTCAAACAAGAATTTGACGCCATTTCTATGGAAAAACTTGACCTTCAACAACAGGTTTCTATCTCTTTTTCTCTTTTTCCGCCCATGCATTTCCATGCACAAATCTTTGTCATTTTGATCTTTGGATGTACAATGTTGTTGGAGTAGGTGAGGGAACTAAGAAGCATGCTAAGAGAACAAGCGGTAAGGAATCACGGGTCGATGGCTTACATGACCGTCTCCGAGGAAGAGGCGGCAGAGAGCACGGCAGAGGGCGTTCGGAGCTGGAATAATCACATCTTTAATGTCGAAAATGTCGAACAAATATCAGCTTCTTCAATTCCTTCACCCTGGTCTTGTTCTCAAGTTGCTCACTTGCCTTCTTATCCATAAATTTTGGATTAGAAATTTAATGTTGAATTTTACATTATCAAGTTTTAAATAATTTTTGAAATTTTGATAGATTCAAATTTTCTT

mRNA sequence

GAATCGTATTCTTAACATCGGGTTTAATGAGCGGTAGAGACAACAGAGACGAAGAGACTGGGCATGGAAGCTCAGGAAAGTAGGGTTGGAGGAGTGGATGAGAAGAAGAAGAGGTTCAGTCGGGATCAATTGGAGTCATTGGAGAGAAGCTTTCAAGAGGAAGTGAAGCTTGAACCTGAGAGAAAAATGAAGCTATCAAAGGAGATTGGACTCCAACCAAGGCAGATAGCGGTGTGGTTCCAGAATAGAAGAGCTCGCTCAAAGGTTAAGCAGCTTCAGCATCTCTATGACACTCTCAAACAAGAATTTGACGCCATTTCTATGGAAAAACTTGACCTTCAACAACAGGTGAGGGAACTAAGAAGCATGCTAAGAGAACAAGCGGTAAGGAATCACGGGTCGATGGCTTACATGACCGTCTCCGAGGAAGAGGCGGCAGAGAGCACGGCAGAGGGCGTTCGGAGCTGGAATAATCACATCTTTAATGTCGAAAATGTCGAACAAATATCAGCTTCTTCAATTCCTTCACCCTGGTCTTGTTCTCAAGTTGCTCACTTGCCTTCTTATCCATAAATTTTGGATTAGAAATTTAATGTTGAATTTTACATTATCAAGTTTTAAATAATTTTTGAAATTTTGATAGATTCAAATTTTCTT

Coding sequence (CDS)

ATGGAAGCTCAGGAAAGTAGGGTTGGAGGAGTGGATGAGAAGAAGAAGAGGTTCAGTCGGGATCAATTGGAGTCATTGGAGAGAAGCTTTCAAGAGGAAGTGAAGCTTGAACCTGAGAGAAAAATGAAGCTATCAAAGGAGATTGGACTCCAACCAAGGCAGATAGCGGTGTGGTTCCAGAATAGAAGAGCTCGCTCAAAGGTTAAGCAGCTTCAGCATCTCTATGACACTCTCAAACAAGAATTTGACGCCATTTCTATGGAAAAACTTGACCTTCAACAACAGGTGAGGGAACTAAGAAGCATGCTAAGAGAACAAGCGGTAAGGAATCACGGGTCGATGGCTTACATGACCGTCTCCGAGGAAGAGGCGGCAGAGAGCACGGCAGAGGGCGTTCGGAGCTGGAATAATCACATCTTTAATGTCGAAAATGTCGAACAAATATCAGCTTCTTCAATTCCTTCACCCTGGTCTTGTTCTCAAGTTGCTCACTTGCCTTCTTATCCATAA

Protein sequence

MEAQESRVGGVDEKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQNRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVSEEEAAESTAEGVRSWNNHIFNVENVEQISASSIPSPWSCSQVAHLPSYP

Homology

[Close]

BLAST of Cp4.1LG19g03670 vs. ExPASy Swiss-Prot
Match: Q9LZR0 (Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana OX=3702 GN=ATHB-51 PE=2 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 1.8e-26
Identity = 66/111 (59.46%), Postives = 87/111 (78.38%), Query Frame = 0


Query: 14  KKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQNRRARSKVKQLQH 73
           KKKR +  QL SLERSFQEE+KL+ +RK+KLS+E+GLQPRQIAVWFQNRRAR K KQL+ 
Sbjct: 77  KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQ 136

Query: 74  LYDTLKQEFDAISMEKLDLQQQVRELRSMLREQA-VRNHGSMAYMTVSEEE 124
           LYD+L+QE+D +S EK  L  +V++LR++LR+Q  ++   S   + VS EE
Sbjct: 137 LYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQISAGTIKVSGEE 187

[Close]

BLAST of Cp4.1LG19g03670 vs. ExPASy Swiss-Prot
Match: Q4PSR7 (Homeobox-leucine zipper protein ATHB-22 OS=Arabidopsis thaliana OX=3702 GN=ATHB-22 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.3e-25
Identity = 63/112 (56.25%), Postives = 87/112 (77.68%), Query Frame = 0


Query: 4   QESRVGGVDEKKKRFSRDQLESLERSFQEEV--------KLEPERKMKLSKEIGLQPRQI 63
           + +   G ++KKK+ + +QL+ LERSFQEE+        KL P+RKMKLSKE+GLQPRQI
Sbjct: 61  ESNSFNGQEKKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQI 120

Query: 64  AVWFQNRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQA 108
           AVWFQNR+AR K KQL+HLY++L+QEFD +S EK  LQ+++ +L+SM+RE +
Sbjct: 121 AVWFQNRKARWKNKQLEHLYESLRQEFDIVSREKELLQEELIQLKSMIREDS 172

[Close]

BLAST of Cp4.1LG19g03670 vs. ExPASy Swiss-Prot
Match: Q9XH37 (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica OX=39946 GN=HOX4 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.2e-20
Identity = 59/132 (44.70%), Postives = 89/132 (67.42%), Query Frame = 0


Query: 1   MEAQESRVGGVDEKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQ 60
           +E +    GG  EKK+R S +Q+ +LERSF+ E KLEPERK +L++++GLQPRQ+AVWFQ
Sbjct: 38  VEEEMMACGGGGEKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQ 97

Query: 61  NRRARSKVKQLQ-------HLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGS 120
           NRRAR K KQL+       H YD+L+ + DA+  +K  L  +++EL++ L ++      +
Sbjct: 98  NRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDE----EAA 157

Query: 121 MAYMTVSEEEAA 126
            ++ +V EE AA
Sbjct: 158 ASFTSVKEEPAA 165

[Close]

BLAST of Cp4.1LG19g03670 vs. ExPASy Swiss-Prot
Match: Q6K498 (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX4 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.2e-20
Identity = 59/132 (44.70%), Postives = 89/132 (67.42%), Query Frame = 0


Query: 1   MEAQESRVGGVDEKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQ 60
           +E +    GG  EKK+R S +Q+ +LERSF+ E KLEPERK +L++++GLQPRQ+AVWFQ
Sbjct: 38  VEEEMMACGGGGEKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQ 97

Query: 61  NRRARSKVKQLQ-------HLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGS 120
           NRRAR K KQL+       H YD+L+ + DA+  +K  L  +++EL++ L ++      +
Sbjct: 98  NRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDE----EAA 157

Query: 121 MAYMTVSEEEAA 126
            ++ +V EE AA
Sbjct: 158 ASFTSVKEEPAA 165

[Close]

BLAST of Cp4.1LG19g03670 vs. ExPASy Swiss-Prot
Match: Q00466 (Homeobox-leucine zipper protein HAT7 OS=Arabidopsis thaliana OX=3702 GN=HAT7 PE=2 SV=4)

HSP 1 Score: 98.2 bits (243), Expect = 9.4e-20
Identity = 64/159 (40.25%), Postives = 94/159 (59.12%), Query Frame = 0


Query: 13  EKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQNRRARSKVKQLQ 72
           EKKKR + +Q+ +LE+SF+   KLEPERKM+L+K +GLQPRQIA+WFQNRRAR K KQL+
Sbjct: 114 EKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLE 173

Query: 73  HLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVSEEEAAESTAEGV 132
             YD+LK++FD +  +   L    ++L + L   A++ H       +  E A  S +   
Sbjct: 174 RDYDSLKKQFDVLKSDNDSLLAHNKKLHAEL--VALKKHDRKESAKIKREFAEASWSNNG 233

Query: 133 RSWNNHIFN------VENVEQISASSIPSPWSCSQVAHL 166
            + NNH  N      V  ++ +  SSI S  + +   H+
Sbjct: 234 STENNHNNNSSDANHVSMIKDLFPSSIRSATATTTSTHI 270

[Close]

BLAST of Cp4.1LG19g03670 vs. NCBI nr
Match: XP_023518109.1 (homeobox-leucine zipper protein ATHB-22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317 bits (813), Expect = 3.32e-108
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MEAQESRVGGVDEKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQ 60
           MEAQESRVGGVDEKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQ
Sbjct: 44  MEAQESRVGGVDEKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQ 103

Query: 61  NRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVS 120
           NRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVS
Sbjct: 104 NRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVS 163

Query: 121 EEEAAESTAEGVRSWNNHIFNVENVEQISASSIPSPWSCSQVAHLPSYP 169
           EEEAAESTAEGVRSWNNHIFNVENVEQISASSIPSPWSCSQVAHLPSYP
Sbjct: 164 EEEAAESTAEGVRSWNNHIFNVENVEQISASSIPSPWSCSQVAHLPSYP 212

[Close]

BLAST of Cp4.1LG19g03670 vs. NCBI nr
Match: XP_022962645.1 (putative homeobox-leucine zipper protein ATHB-51 [Cucurbita moschata])

HSP 1 Score: 308 bits (790), Expect = 2.39e-105
Identity = 165/169 (97.63%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 1   MEAQESRVGGVDEKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQ 60
           MEAQESRVGGVDEKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQ
Sbjct: 1   MEAQESRVGGVDEKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQ 60

Query: 61  NRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVS 120
           NRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVS
Sbjct: 61  NRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVS 120

Query: 121 EEEAAESTAEGVRSWNNHIFNVENVEQISASSIPSPWSCSQVAHLPSYP 169
           EEEAAESTAEGVRSWNNHIFNVENV+QISASSIPS WSCSQ AHLP YP
Sbjct: 121 EEEAAESTAEGVRSWNNHIFNVENVDQISASSIPSLWSCSQAAHLPYYP 169

[Close]

BLAST of Cp4.1LG19g03670 vs. NCBI nr
Match: XP_022972608.1 (putative homeobox-leucine zipper protein ATHB-51 [Cucurbita maxima])

HSP 1 Score: 294 bits (752), Expect = 1.48e-99
Identity = 159/169 (94.08%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 1   MEAQESRVGGVDEKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQ 60
           MEA ESR GGVDEKKKRFS+DQLESLERSFQEEVKLEP+RKMKLSKEIGLQPRQIAVWFQ
Sbjct: 1   MEAHESRGGGVDEKKKRFSQDQLESLERSFQEEVKLEPDRKMKLSKEIGLQPRQIAVWFQ 60

Query: 61  NRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVS 120
           NRRARSKVKQLQHLYDTLKQEFDAISMEK+DLQQQVRELRSMLREQAVRNHGSMAYMTVS
Sbjct: 61  NRRARSKVKQLQHLYDTLKQEFDAISMEKIDLQQQVRELRSMLREQAVRNHGSMAYMTVS 120

Query: 121 EEEAAESTAEGVRSWNNHIFNVENVEQISASSIPSPWSCSQVAHLPSYP 169
           EEEAAESTAEGVRS NNHIFNVENV+QISASSIPS WS SQ AHLPSYP
Sbjct: 121 EEEAAESTAEGVRSCNNHIFNVENVDQISASSIPSLWSSSQAAHLPSYP 169

[Close]

BLAST of Cp4.1LG19g03670 vs. NCBI nr
Match: KAG7027214.1 (putative homeobox-leucine zipper protein ATHB-51, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 284 bits (726), Expect = 1.15e-95
Identity = 157/169 (92.90%), Postives = 158/169 (93.49%), Query Frame = 0


Query: 1   MEAQESRVGGVDEKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQ 60
           MEAQESRVGGVDEKKKRFSRDQLESLERSFQEE KLEP+RKMKLSKEIGLQPRQIAVWFQ
Sbjct: 1   MEAQESRVGGVDEKKKRFSRDQLESLERSFQEEGKLEPDRKMKLSKEIGLQPRQIAVWFQ 60

Query: 61  NRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVS 120
           NRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSM YMTVS
Sbjct: 61  NRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMTYMTVS 120

Query: 121 EEEAAESTAEGVRSWNNHIFNVENVEQISASSIPSPWSCSQVAHLPSYP 169
           EEEAAESTAEGVRS NNHIFNVE     SASSIPS WSCSQ AHLP YP
Sbjct: 121 EEEAAESTAEGVRSCNNHIFNVE-----SASSIPSLWSCSQAAHLPYYP 164

[Close]

BLAST of Cp4.1LG19g03670 vs. NCBI nr
Match: KAG6595211.1 (putative homeobox-leucine zipper protein ATHB-51, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 284 bits (726), Expect = 5.01e-95
Identity = 157/169 (92.90%), Postives = 158/169 (93.49%), Query Frame = 0


Query: 1   MEAQESRVGGVDEKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQ 60
           MEAQESRVGGVDEKKKRFSRDQLESLERSFQEE KLEP+RKMKLSKEIGLQPRQIAVWFQ
Sbjct: 44  MEAQESRVGGVDEKKKRFSRDQLESLERSFQEEGKLEPDRKMKLSKEIGLQPRQIAVWFQ 103

Query: 61  NRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVS 120
           NRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVS
Sbjct: 104 NRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVS 163

Query: 121 EEEAAESTAEGVRSWNNHIFNVENVEQISASSIPSPWSCSQVAHLPSYP 169
           EEEA ESTAEGVRS NNHIFNVE     SASSIPS WSCSQ AHLP YP
Sbjct: 164 EEEATESTAEGVRSCNNHIFNVE-----SASSIPSLWSCSQAAHLPYYP 207

[Close]

BLAST of Cp4.1LG19g03670 vs. ExPASy TrEMBL
Match: A0A6J1HFP2 (putative homeobox-leucine zipper protein ATHB-51 OS=Cucurbita moschata OX=3662 GN=LOC111463063 PE=4 SV=1)

HSP 1 Score: 308 bits (790), Expect = 1.16e-105
Identity = 165/169 (97.63%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 1   MEAQESRVGGVDEKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQ 60
           MEAQESRVGGVDEKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQ
Sbjct: 1   MEAQESRVGGVDEKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQ 60

Query: 61  NRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVS 120
           NRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVS
Sbjct: 61  NRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVS 120

Query: 121 EEEAAESTAEGVRSWNNHIFNVENVEQISASSIPSPWSCSQVAHLPSYP 169
           EEEAAESTAEGVRSWNNHIFNVENV+QISASSIPS WSCSQ AHLP YP
Sbjct: 121 EEEAAESTAEGVRSWNNHIFNVENVDQISASSIPSLWSCSQAAHLPYYP 169

[Close]

BLAST of Cp4.1LG19g03670 vs. ExPASy TrEMBL
Match: A0A6J1IAH2 (putative homeobox-leucine zipper protein ATHB-51 OS=Cucurbita maxima OX=3661 GN=LOC111471145 PE=4 SV=1)

HSP 1 Score: 294 bits (752), Expect = 7.18e-100
Identity = 159/169 (94.08%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 1   MEAQESRVGGVDEKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQ 60
           MEA ESR GGVDEKKKRFS+DQLESLERSFQEEVKLEP+RKMKLSKEIGLQPRQIAVWFQ
Sbjct: 1   MEAHESRGGGVDEKKKRFSQDQLESLERSFQEEVKLEPDRKMKLSKEIGLQPRQIAVWFQ 60

Query: 61  NRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVS 120
           NRRARSKVKQLQHLYDTLKQEFDAISMEK+DLQQQVRELRSMLREQAVRNHGSMAYMTVS
Sbjct: 61  NRRARSKVKQLQHLYDTLKQEFDAISMEKIDLQQQVRELRSMLREQAVRNHGSMAYMTVS 120

Query: 121 EEEAAESTAEGVRSWNNHIFNVENVEQISASSIPSPWSCSQVAHLPSYP 169
           EEEAAESTAEGVRS NNHIFNVENV+QISASSIPS WS SQ AHLPSYP
Sbjct: 121 EEEAAESTAEGVRSCNNHIFNVENVDQISASSIPSLWSSSQAAHLPSYP 169

[Close]

BLAST of Cp4.1LG19g03670 vs. ExPASy TrEMBL
Match: A0A5D3CAN1 (Homeobox-leucine zipper protein ATHB-22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00890 PE=4 SV=1)

HSP 1 Score: 194 bits (493), Expect = 4.94e-60
Identity = 110/170 (64.71%), Postives = 137/170 (80.59%), Query Frame = 0


Query: 2   EAQESRVGGVD-EKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQ 61
           E +++  GGVD +KKKR S+DQLE+LERSFQEEVKL+P+RKMKLS E+GLQPRQIAVWFQ
Sbjct: 30  EGKQNMAGGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSMELGLQPRQIAVWFQ 89

Query: 62  NRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVS 121
           NRRAR K KQL+HLYDTLKQ+FD IS EK +LQQ+V +LR+MLREQ  RN GSMA+  +S
Sbjct: 90  NRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRNMLREQTTRNAGSMAHTDIS 149

Query: 122 -EEEAAESTAEGVRSWNNHIFNVENVEQISASSIPSPWSCSQVAHLPSYP 169
            EE   E T+  + S NN+++NVE+ +QISAS+ P  W  ++ AHLPSYP
Sbjct: 150 GEETTVECTSVEILSCNNYMYNVEDFDQISASAPPFWWG-AEAAHLPSYP 198

[Close]

BLAST of Cp4.1LG19g03670 vs. ExPASy TrEMBL
Match: A0A5A7SJ21 (Homeobox-leucine zipper protein ATHB-22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001530 PE=4 SV=1)

HSP 1 Score: 193 bits (491), Expect = 9.94e-60
Identity = 110/170 (64.71%), Postives = 136/170 (80.00%), Query Frame = 0


Query: 2   EAQESRVGGVD-EKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQ 61
           E +++  GGVD +KKKR S+DQLE+LERSFQEEVKL+P+RKMKLS E+GLQPRQIAVWFQ
Sbjct: 30  EGKQNMAGGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSMELGLQPRQIAVWFQ 89

Query: 62  NRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVS 121
           NRRAR K KQL+HLYDTLKQ+FD IS EK +LQQ+V +LR+MLREQ  RN GSMA+  +S
Sbjct: 90  NRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRNMLREQTTRNAGSMAHTDIS 149

Query: 122 -EEEAAESTAEGVRSWNNHIFNVENVEQISASSIPSPWSCSQVAHLPSYP 169
            EE   E T+  + S NN+++NVE+  QISAS+ P  W  ++ AHLPSYP
Sbjct: 150 GEETTVECTSVEILSCNNYMYNVEDFNQISASAPPFWWG-AEAAHLPSYP 198

[Close]

BLAST of Cp4.1LG19g03670 vs. ExPASy TrEMBL
Match: A0A0A0KET9 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G449320 PE=4 SV=1)

HSP 1 Score: 194 bits (492), Expect = 1.59e-59
Identity = 111/162 (68.52%), Postives = 132/162 (81.48%), Query Frame = 0


Query: 10  GVD-EKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQNRRARSKV 69
           GVD +KKKR S+DQLE+LERSFQEEVKL+P+RKMKLSKE+GLQPRQIAVWFQNRRAR K 
Sbjct: 64  GVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRARWKT 123

Query: 70  KQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVS-EEEAAES 129
           KQL+HLYDTLKQ+FD IS EK +LQQ+V +LRSMLREQ  RN GSMA+  VS EE   E 
Sbjct: 124 KQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTTRNQGSMAHTDVSGEETTVEC 183

Query: 130 TAEGVRSWNNHIFNVENVEQISASSIPSPWSCSQVAHLPSYP 169
           T+  + S NN+++NVE+  QISAS+ P  W  ++ AHLPSYP
Sbjct: 184 TSVEILSCNNYMYNVEDFNQISASAPPFWWG-AEAAHLPSYP 224

[Close]

BLAST of Cp4.1LG19g03670 vs. TAIR 10
Match: AT5G03790.1 (homeobox 51 )

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-27
Identity = 66/111 (59.46%), Postives = 87/111 (78.38%), Query Frame = 0


Query: 14  KKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQNRRARSKVKQLQH 73
           KKKR +  QL SLERSFQEE+KL+ +RK+KLS+E+GLQPRQIAVWFQNRRAR K KQL+ 
Sbjct: 77  KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQ 136

Query: 74  LYDTLKQEFDAISMEKLDLQQQVRELRSMLREQA-VRNHGSMAYMTVSEEE 124
           LYD+L+QE+D +S EK  L  +V++LR++LR+Q  ++   S   + VS EE
Sbjct: 137 LYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQISAGTIKVSGEE 187

[Close]

BLAST of Cp4.1LG19g03670 vs. TAIR 10
Match: AT2G36610.1 (homeobox protein 22 )

HSP 1 Score: 116.3 bits (290), Expect = 2.4e-26
Identity = 63/112 (56.25%), Postives = 87/112 (77.68%), Query Frame = 0


Query: 4   QESRVGGVDEKKKRFSRDQLESLERSFQEEV--------KLEPERKMKLSKEIGLQPRQI 63
           + +   G ++KKK+ + +QL+ LERSFQEE+        KL P+RKMKLSKE+GLQPRQI
Sbjct: 61  ESNSFNGQEKKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQI 120

Query: 64  AVWFQNRRARSKVKQLQHLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQA 108
           AVWFQNR+AR K KQL+HLY++L+QEFD +S EK  LQ+++ +L+SM+RE +
Sbjct: 121 AVWFQNRKARWKNKQLEHLYESLRQEFDIVSREKELLQEELIQLKSMIREDS 172

[Close]

BLAST of Cp4.1LG19g03670 vs. TAIR 10
Match: AT5G15150.1 (homeobox 3 )

HSP 1 Score: 98.2 bits (243), Expect = 6.7e-21
Identity = 64/159 (40.25%), Postives = 94/159 (59.12%), Query Frame = 0


Query: 13  EKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQNRRARSKVKQLQ 72
           EKKKR + +Q+ +LE+SF+   KLEPERKM+L+K +GLQPRQIA+WFQNRRAR K KQL+
Sbjct: 114 EKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLE 173

Query: 73  HLYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVSEEEAAESTAEGV 132
             YD+LK++FD +  +   L    ++L + L   A++ H       +  E A  S +   
Sbjct: 174 RDYDSLKKQFDVLKSDNDSLLAHNKKLHAEL--VALKKHDRKESAKIKREFAEASWSNNG 233

Query: 133 RSWNNHIFN------VENVEQISASSIPSPWSCSQVAHL 166
            + NNH  N      V  ++ +  SSI S  + +   H+
Sbjct: 234 STENNHNNNSSDANHVSMIKDLFPSSIRSATATTTSTHI 270

[Close]

BLAST of Cp4.1LG19g03670 vs. TAIR 10
Match: AT4G40060.1 (homeobox protein 16 )

HSP 1 Score: 94.4 bits (233), Expect = 9.6e-20
Identity = 53/121 (43.80%), Postives = 80/121 (66.12%), Query Frame = 0


Query: 10  GVDEKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQNRRARSKVK 69
           G+ EKK+R   DQ+++LE++F+ E KLEPERK KL++E+GLQPRQ+AVWFQNRRAR K K
Sbjct: 55  GLSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTK 114

Query: 70  QLQH-------LYDTLKQEFDAISMEKLDLQQQVRELRSMLREQAVRNHGSMAYMTVSEE 124
           QL+         YD+L+  FD++  +   L Q++ ++++ +  +   N+       V EE
Sbjct: 115 QLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEEDNNNNKAITEGVKEE 174

[Close]

BLAST of Cp4.1LG19g03670 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 )

HSP 1 Score: 92.8 bits (229), Expect = 2.8e-19
Identity = 56/131 (42.75%), Postives = 89/131 (67.94%), Query Frame = 0


Query: 10  GVDEKKKRFSRDQLESLERSFQEEVKLEPERKMKLSKEIGLQPRQIAVWFQNRRARSKVK 69
           G+ EKK+R S +Q+++LE++F+ E KLEPERK+KL++E+GLQPRQ+AVWFQNRRAR K K
Sbjct: 58  GLSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 117

Query: 70  QLQH-------LYDTLKQEFDAISMEKLDLQQQVRELRSML-----REQAVRNHGSM--- 126
           QL+         YD+L+  FD++  +   L Q++ +L++ L      E+   N+ ++   
Sbjct: 118 QLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTE 177

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g03670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZR0	1.8e-26	59.46	Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana OX=3702...	[more]
Q4PSR7	3.3e-25	56.25	Homeobox-leucine zipper protein ATHB-22 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q9XH37	3.2e-20	44.70	Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica OX=39946 GN=H...	[more]
Q6K498	3.2e-20	44.70	Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q00466	9.4e-20	40.25	Homeobox-leucine zipper protein HAT7 OS=Arabidopsis thaliana OX=3702 GN=HAT7 PE=...	[more]

BLAST of Cp4.1LG19g03670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518109.1	3.32e-108	100.00	homeobox-leucine zipper protein ATHB-22-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962645.1	2.39e-105	97.63	putative homeobox-leucine zipper protein ATHB-51 [Cucurbita moschata]	[more]
XP_022972608.1	1.48e-99	94.08	putative homeobox-leucine zipper protein ATHB-51 [Cucurbita maxima]	[more]
KAG7027214.1	1.15e-95	92.90	putative homeobox-leucine zipper protein ATHB-51, partial [Cucurbita argyrosperm...	[more]
KAG6595211.1	5.01e-95	92.90	putative homeobox-leucine zipper protein ATHB-51, partial [Cucurbita argyrosperm...	[more]

BLAST of Cp4.1LG19g03670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFP2	1.16e-105	97.63	putative homeobox-leucine zipper protein ATHB-51 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1IAH2	7.18e-100	94.08	putative homeobox-leucine zipper protein ATHB-51 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A5D3CAN1	4.94e-60	64.71	Homeobox-leucine zipper protein ATHB-22-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A5A7SJ21	9.94e-60	64.71	Homeobox-leucine zipper protein ATHB-22-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A0A0KET9	1.59e-59	68.52	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G449320 PE...	[more]

BLAST of Cp4.1LG19g03670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03790.1	1.3e-27	59.46	homeobox 51	[more]
AT2G36610.1	2.4e-26	56.25	homeobox protein 22	[more]
AT5G15150.1	6.7e-21	40.25	homeobox 3	[more]
AT4G40060.1	9.6e-20	43.80	homeobox protein 16	[more]
AT2G22430.1	2.8e-19	42.75	homeobox protein 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 61..95
None	No IPR available	GENE3D	1.10.10.60		coord: 9..74 e-value: 1.9E-20 score: 74.1
None	No IPR available	PANTHER	PTHR24326	HOMEOBOX-LEUCINE ZIPPER PROTEIN	coord: 12..146
None	No IPR available	PANTHER	PTHR24326:SF556	HOMEOBOX LEUCINE ZIPPER PROTEIN	coord: 12..146
IPR000047	Helix-turn-helix motif	PRINTS	PR00031	HTHREPRESSR	coord: 49..65 score: 55.68 coord: 40..49 score: 29.9
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 12..73 e-value: 7.9E-16 score: 68.6
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 14..67 e-value: 1.3E-16 score: 60.2
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 9..69 score: 16.940708
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 14..70 e-value: 1.67668E-14 score: 62.646
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 44..67
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 14..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g03670.1	Cp4.1LG19g03670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding