Cp4.1LG18g07420 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCTAATATCACGTTGATAATATGGCACTCTCTCACAAGTATTGAGGGAGGGAAGAACAAGGAGTGTGTGGAATGGCACACAGGCTGCATGGTTCAACTCACTTAAACAGTGTCCATCCCTCTATTTCTATAGAGTCAAAATCTGTATTGTCTCTGCACCATGGCATCTCTTCCATATCTCCCATGCCTAACCTTGCTCTTTCTCCTGCACGTTACTCTACCGATTGCCGTTTCACAAGATCCGACCCTCTCGAGCCCCACCATAGCTCAATGCACCGCGAGTCTTCTTCCATTGGCATCGTGTGCGCCTTTCGTGCAAGGTATGGCATCGATGCCACCGATGACATGCTGTGGTAACCTGAAACAACTCTACACCAGTGTCCCCAGCTGCCTTTGCCTCTTGCTGAATGGCACTACCTTGAGTTCTTTCCCTATCAACACTACTAGAGCTACCCAGCTGCCTGATATTTGCAGCCTTCAAGTTAACATCTCCACATGTTCAGGTACAACTATAATCCTGTCATCCTAAAGCCTGTTAAGTATCTTCTTCTACTTCGTTCTAACATTTATAACTCTCTGAATGGTCATTTGAAGCTCTCCTTGAGCCACCAAGTCCTCCCAGTTCTCATGTTTCTCCTAGAGTAAACACCAACACCACAATTACCAATGCTACGGTTCTAGGTATAGTTTTTGGTTCAGCTCTACTACAAGCACGACATGTTATACATTGTGACACTACTTTTATGGATTTCAGCTACTCCAGTGGGTCAACCAACACCAAAACCTAGCATGGTGGGGTTAGGATTGGGCAGCATCAGTGCTAGTTTCAAGCCAAGGGCGGGAATTCAGCTCAAAGTAGTGATTGCTATGAAGACTTTTCTGTTTCTTCTAGTTCTTCATTGAAACCAATTATCTAAAATCTCGTTCAACATTATATGCTCTTCTTTATTAGATTCCCCGTAGGTTGTTTTGGTTCAATAACGTTGTTTCTCTTAGCAGCTGACAGAAAAATGGTTCCCTGTTTTCAGATAAGTCTTGTTCCTTTGTCTCCCTAAAACAGTCAGCCTAAGGAGAGAAATCTAAGTAAAAGGCCATAGCAGATAGACAGAATGAAGTAAATGAGAATGGCCTAAAAGAAGAACAATATGCTGACAAGAAAACTAAGACATGCAAAATCAAAATCTTTACTAGATTCAATAGAATAAGGTTTTCATAACATACCTAGAAAGCTTATGGCATTACAAATTCACACAGTATTCTTTGTTTCCTTTTCACTTCTTTAACTGGTTACGAGGATGATAATGGATTCAAGATGTGGGGTCTGTTTTTGATATCGAAATATCAAGATCATTCCAAACTAGGAGCCACCTCTGTTGGATTAGATTCAAAGACATCTGGGTTTGATGCCTCGGGTTCTTCTAATATCTCTTGAGTTTGAACTGATTCTTTGTATGCAGGCGTGTCCTTGAAATCAGTGGCTCCTTCGTTGTATGTAGTGACAGCAATCCCACATGCAATTACCTATTGTAATGATGAATGAATTAGTGAATCGCCCATTTGCGAAAGGATAACAGAACATGAGCTATCTATTTTATCCTTTTCTAGAAAAACTACCCAAAAGAAAACATCTAATTGATGTTAGATCATGATTCTGTTCTTGTTATGTTGAAGAAAAAGCTGAGTTGCTGGTTAATTTAGTGTTTGGGCCTCGCTTATCTCAAATCTCATCTGTCAATTACAGAGGCAACTAGATTTCTGGAACTAAGTTATTAATCTGAATCTTTTGCTGAATGCTATCTAAGATTAGAACAGACAACAGAATCAATCAAATAATTATAGGACATAATTGGCGAAATTAAAGATAGGGAAAAATCGAACCGCGAAAGCGATGCCAAAGGCCCACAAGTACTCGAGGAAGAAGCCGAGGGGATCCCACTGCTGACCCTCCCAGAAATCAGGCTGGAGCCCAGGCAATTCCGGCAAATTTTCATCCACATCAAACGCTACACCGGCATTTTCAGCAATTTCGGCCATCCGATTTCGTTCATCTTCTTGTTGTTCTTCCTGTTCCTTGGTTGGCGTCGAGCTCCTCCGGTTCTTACTGTCGATTCGGCCAATTCGGAAGGAGGATTTCTTTGAATGAACGACATGGAGGGTGCGGGCTTCTTTAGACGGCGAAAAGAGCGCGTTGCGACGGAAAAGGAATTGGTTGGAAGGAGTTCTGGTGGAGGTTCTATAGAGAATTCCCCCGCCGGTGCCACAAGCGGCGCCGCCATTGGTTATGGTCAGAGCCATTTGAGTGGAGGAGAGTGAGCTCTGAACACCCAGAAAAATGGAGGAGGAGGATTGTGCGGATAA ATCTAATATCACGTTGATAATATGGCACTCTCTCACAAGTATTGAGGGAGGGAAGAACAAGGAGTGTGTGGAATGGCACACAGGCTGCATGGTTCAACTCACTTAAACAGTGTCCATCCCTCTATTTCTATAGAGTCAAAATCTGTATTGTCTCTGCACCATGGCATCTCTTCCATATCTCCCATGCCTAACCTTGCTCTTTCTCCTGCACGTTACTCTACCGATTGCCGTTTCACAAGATCCGACCCTCTCGAGCCCCACCATAGCTCAATGCACCGCGAGTCTTCTTCCATTGGCATCGTGTGCGCCTTTCGTGCAAGGTATGGCATCGATGCCACCGATGACATGCTGTGGTAACCTGAAACAACTCTACACCAGTGTCCCCAGCTGCCTTTGCCTCTTGCTGAATGGCACTACCTTGAGTTCTTTCCCTATCAACACTACTAGAGCTACCCAGCTGCCTGATATTTGCAGCCTTCAAGTTAACATCTCCACATGTTCAGCTCTCCTTGAGCCACCAAGTCCTCCCAGTTCTCATGTTTCTCCTAGAGTAAACACCAACACCACAATTACCAATGCTACGGTTCTAGCTACTCCAGTGGGTCAACCAACACCAAAACCTAGCATGGTGGGGTTAGGATTGGGCAGCATCAGTGCTAGTTTCAAGCCAAGGGCGGGAATTCAGCTCAAAGTAGTGATTGCTATGAAGACTTTTCTGTTTCTTCTAGTTCTTCATTGAAACCAATTATCTAAAATCTCGTTCAACATTATATGCTCTTCTTTATTAGATTCCCCGTAGGTTGTTTTGGTTCAATAACGTTGTTTCTCTTAGCAGCTGACAGAAAAATGGTTCCCTGTTTTCAGATAAGTCTTGTTCCTTTGTCTCCCTAAAACAGTCAGCCTAAGGAGAGAAATCTAAGTAAAAGGCCATAGCAGATAGACAGAATGAAGTAAATGAGAATGGCCTAAAAGAAGAACAATATGCTGACAAGAAAACTAAGACATGCAAAATCAAAATCTTTACTAGATTCAATAGAATAAGGTTTTCATAACATACCTAGAAAGCTTATGGCATTACAAATTCACACAGTATTCTTTGTTTCCTTTTCACTTCTTTAACTGGTTACGAGGATGATAATGGATTCAAGATGTGGGGTCTGTTTTTGATATCGAAATATCAAGATCATTCCAAACTAGGAGCCACCTCTGTTGGATTAGATTCAAAGACATCTGGGTTTGATGCCTCGGGTTCTTCTAATATCTCTTGAGTTTGAACTGATTCTTTGTATGCAGGCGTGTCCTTGAAATCAGTGGCTCCTTCGTTGTATGTAGTGACAGCAATCCCACATGCAATTACCTATTGTAATGATGAATGAATTAGTGAATCGCCCATTTGCGAAAGGATAACAGAACATGAGCTATCTATTTTATCCTTTTCTAGAAAAACTACCCAAAAGAAAACATCTAATTGATGTTAGATCATGATTCTGTTCTTGTTATGTTGAAGAAAAAGCTGAGTTGCTGGTTAATTTAGTGTTTGGGCCTCGCTTATCTCAAATCTCATCTGTCAATTACAGAGGCAACTAGATTTCTGGAACTAAGTTATTAATCTGAATCTTTTGCTGAATGCTATCTAAGATTAGAACAGACAACAGAATCAATCAAATAATTATAGGACATAATTGGCGAAATTAAAGATAGGGAAAAATCGAACCGCGAAAGCGATGCCAAAGGCCCACAAGTACTCGAGGAAGAAGCCGAGGGGATCCCACTGCTGACCCTCCCAGAAATCAGGCTGGAGCCCAGGCAATTCCGGCAAATTTTCATCCACATCAAACGCTACACCGGCATTTTCAGCAATTTCGGCCATCCGATTTCGTTCATCTTCTTGTTGTTCTTCCTGTTCCTTGGTTGGCGTCGAGCTCCTCCGGTTCTTACTGTCGATTCGGCCAATTCGGAAGGAGGATTTCTTTGAATGAACGACATGGAGGGTGCGGGCTTCTTTAGACGGCGAAAAGAGCGCGTTGCGACGGAAAAGGAATTGGTTGGAAGGAGTTCTGGTGGAGGTTCTATAGAGAATTCCCCCGCCGGTGCCACAAGCGGCGCCGCCATTGGTTATGGTCAGAGCCATTTGAGTGGAGGAGAGTGAGCTCTGAACACCCAGAAAAATGGAGGAGGAGGATTGTGCGGATAA ATGGCATCTCTTCCATATCTCCCATGCCTAACCTTGCTCTTTCTCCTGCACGTTACTCTACCGATTGCCGTTTCACAAGATCCGACCCTCTCGAGCCCCACCATAGCTCAATGCACCGCGAGTCTTCTTCCATTGGCATCGTGTGCGCCTTTCGTGCAAGGTATGGCATCGATGCCACCGATGACATGCTGTGGTAACCTGAAACAACTCTACACCAGTGTCCCCAGCTGCCTTTGCCTCTTGCTGAATGGCACTACCTTGAGTTCTTTCCCTATCAACACTACTAGAGCTACCCAGCTGCCTGATATTTGCAGCCTTCAAGTTAACATCTCCACATGTTCAGCTCTCCTTGAGCCACCAAGTCCTCCCAGTTCTCATGTTTCTCCTAGAGTAAACACCAACACCACAATTACCAATGCTACGGTTCTAGCTACTCCAGTGGGTCAACCAACACCAAAACCTAGCATGGTGGGGTTAGGATTGGGCAGCATCAGTGCTAGTTTCAAGCCAAGGGCGGGAATTCAGCTCAAAGTAGTGATTGCTATGAAGACTTTTCTGTTTCTTCTAGTTCTTCATTGA MASLPYLPCLTLLFLLHVTLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFVQGMASMPPMTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDICSLQVNISTCSALLEPPSPPSSHVSPRVNTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLKVVIAMKTFLFLLVLH Homology
BLAST of Cp4.1LG18g07420 vs. ExPASy Swiss-Prot
Match: Q9C9B1 (Non-specific lipid transfer protein GPI-anchored 10 OS=Arabidopsis thaliana OX=3702 GN=LTPG10 PE=3 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.3e-20 Identity = 70/167 (41.92%), Postives = 93/167 (55.69%), Query Frame = 0
BLAST of Cp4.1LG18g07420 vs. ExPASy Swiss-Prot
Match: O64865 (Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3702 GN=LTPG14 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 6.5e-09 Identity = 41/121 (33.88%), Postives = 62/121 (51.24%), Query Frame = 0
BLAST of Cp4.1LG18g07420 vs. ExPASy Swiss-Prot
Match: O64864 (Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3702 GN=LTPG13 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.1e-08 Identity = 45/135 (33.33%), Postives = 68/135 (50.37%), Query Frame = 0
BLAST of Cp4.1LG18g07420 vs. ExPASy Swiss-Prot
Match: Q9LJ85 (Non-specific lipid transfer protein GPI-anchored 20 OS=Arabidopsis thaliana OX=3702 GN=LTPG20 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 6.7e-06 Identity = 45/155 (29.03%), Postives = 67/155 (43.23%), Query Frame = 0
BLAST of Cp4.1LG18g07420 vs. ExPASy Swiss-Prot
Match: Q1PFD8 (Non-specific lipid transfer protein GPI-anchored 9 OS=Arabidopsis thaliana OX=3702 GN=LTPG9 PE=2 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 2.6e-05 Identity = 31/112 (27.68%), Postives = 53/112 (47.32%), Query Frame = 0
BLAST of Cp4.1LG18g07420 vs. NCBI nr
Match: XP_023515373.1 (protein YLS3 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 365 bits (938), Expect = 3.71e-127 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0
BLAST of Cp4.1LG18g07420 vs. NCBI nr
Match: XP_022922067.1 (protein YLS3 [Cucurbita moschata]) HSP 1 Score: 357 bits (916), Expect = 8.39e-124 Identity = 187/192 (97.40%), Postives = 190/192 (98.96%), Query Frame = 0
BLAST of Cp4.1LG18g07420 vs. NCBI nr
Match: KAG6589554.1 (Protein YLS3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 357 bits (915), Expect = 1.19e-123 Identity = 187/192 (97.40%), Postives = 189/192 (98.44%), Query Frame = 0
BLAST of Cp4.1LG18g07420 vs. NCBI nr
Match: KAG7023240.1 (Protein YLS3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 357 bits (915), Expect = 3.32e-123 Identity = 187/192 (97.40%), Postives = 189/192 (98.44%), Query Frame = 0
BLAST of Cp4.1LG18g07420 vs. NCBI nr
Match: XP_022987249.1 (protein YLS3 [Cucurbita maxima]) HSP 1 Score: 344 bits (883), Expect = 9.00e-119 Identity = 181/192 (94.27%), Postives = 184/192 (95.83%), Query Frame = 0
BLAST of Cp4.1LG18g07420 vs. ExPASy TrEMBL
Match: A0A6J1E230 (protein YLS3 OS=Cucurbita moschata OX=3662 GN=LOC111430130 PE=4 SV=1) HSP 1 Score: 357 bits (916), Expect = 4.06e-124 Identity = 187/192 (97.40%), Postives = 190/192 (98.96%), Query Frame = 0
BLAST of Cp4.1LG18g07420 vs. ExPASy TrEMBL
Match: A0A6J1JIC4 (protein YLS3 OS=Cucurbita maxima OX=3661 GN=LOC111484860 PE=4 SV=1) HSP 1 Score: 344 bits (883), Expect = 4.36e-119 Identity = 181/192 (94.27%), Postives = 184/192 (95.83%), Query Frame = 0
BLAST of Cp4.1LG18g07420 vs. ExPASy TrEMBL
Match: A0A5A7TH96 (Protein YLS3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00390 PE=4 SV=1) HSP 1 Score: 273 bits (697), Expect = 1.16e-90 Identity = 150/199 (75.38%), Postives = 166/199 (83.42%), Query Frame = 0
BLAST of Cp4.1LG18g07420 vs. ExPASy TrEMBL
Match: A0A1S3BVJ6 (protein YLS3 OS=Cucumis melo OX=3656 GN=LOC103494119 PE=4 SV=1) HSP 1 Score: 273 bits (697), Expect = 1.16e-90 Identity = 150/199 (75.38%), Postives = 166/199 (83.42%), Query Frame = 0
BLAST of Cp4.1LG18g07420 vs. ExPASy TrEMBL
Match: A0A0A0LSN1 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G022510 PE=4 SV=1) HSP 1 Score: 261 bits (667), Expect = 4.56e-86 Identity = 144/196 (73.47%), Postives = 161/196 (82.14%), Query Frame = 0
BLAST of Cp4.1LG18g07420 vs. TAIR 10
Match: AT1G73890.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 101.3 bits (251), Expect = 9.0e-22 Identity = 70/167 (41.92%), Postives = 93/167 (55.69%), Query Frame = 0
BLAST of Cp4.1LG18g07420 vs. TAIR 10
Match: AT2G44300.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 62.4 bits (150), Expect = 4.6e-10 Identity = 41/121 (33.88%), Postives = 62/121 (51.24%), Query Frame = 0
BLAST of Cp4.1LG18g07420 vs. TAIR 10
Match: AT2G44290.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 61.6 bits (148), Expect = 7.9e-10 Identity = 45/135 (33.33%), Postives = 68/135 (50.37%), Query Frame = 0
BLAST of Cp4.1LG18g07420 vs. TAIR 10
Match: AT3G22620.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 52.4 bits (124), Expect = 4.8e-07 Identity = 45/155 (29.03%), Postives = 67/155 (43.23%), Query Frame = 0
BLAST of Cp4.1LG18g07420 vs. TAIR 10
Match: AT1G73560.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 50.4 bits (119), Expect = 1.8e-06 Identity = 31/112 (27.68%), Postives = 53/112 (47.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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