Cp4.1LG18g04880 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g04880
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Alba domain-containing protein
Location	Cp4.1LG18: 5700484 .. 5705012 (+)
RNA-Seq Expression	Cp4.1LG18g04880
Synteny	Cp4.1LG18g04880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTAAAGAAAGTCCATCACTTTCACTCTCCTTTCTCATAGTCGCACTTCCAGAAGTGAGTGTTAGGGTTAGGGTTTTAGGTTTCAGAAGCTCGATGGAAGAGATTACAGAGGGTGTCAACTCCATTGCATTGACAGCTGATTCGCAGAAGAAGAATCGAATTCAAGTCTCCAACACCAAGAAGCCCCTATTCTTCTATGTTAATCTCGCCAAGGTTTGTTTCCTTTCGACTCTTGGCTTCGGATTCGCTTCATTTATTGACTCCTTCCCAATCTGGCTTCTCTAATTTGGTATAAATTGTTAACAGGTTCATTGTTTTGGGATTTGTCTGTTCGTTTATCTGGTTTGTTTTGCTAACCCTCTGGTTACCGATTTTTCTTTTTTCCAATTTATGTAGAGGTATATGCAGCAGTACAATGAGGTCGAGCTTTCTGCGCTTGGGATGGGTAGGTTTTCTATACTGTTTTTACTCCTAATATTAATGGCTATCCATTTTGAGAAGTGCGGATTTGCCTCATAGCCATAGTATGTTTATTCAAGTTTGAAACTGGGACACTTGAATACTCTGCTTAAATGATGGATTTTTTGTAATGTTCTCATGTGGGTAGTCGACTTTTCATTGTTTTTTATGCGACAATTGAAACATTTTTCTATTTGAATTTCAATGCAGTCAATTGATCCTTTCAAATGGTGGTTTGGGTTATTAGTATGTTAAAACTTCTATGTATGCCTTTGCAGCCATTGCAACTGTTGTGACTGTTGCGGAAATTCTGAAAAACAATGGACTGGCTTTAGAAAAGAGTAAATATCCTCTTCCTTCTTTTTTTGGAATATACTATTGGGGCTACCTCTTAGAGATAATGACTTCTTTAGAGATGATGAATATAATTTTGAATGCTCACAAAAATTTTCTTATCTTCTATAGAGATAATGACTTCTACTGTTGATATCAAGGATGATTCTCGAGGGAGACCAGTTCAAAAAGCTAAGGTAATACGTCGTACTGCTTTCTTGCTTTGTTACTTCACAATGGATGATAATTTGGAAGCTGCCTCTCTCGTTTTTTCTCCCTTAAAAGAAACATTGCAAGAGATTTCTCTCTCGTATTTTGGCACATAAAAGTATACCCTCGTGTAACTTCCAATCCGATTTATCACGTTTATTTACTTTCATATTTGGACCCTAGAAATTAGTGGTGTGGGTTACAGACGTTTATTCACTGAGCGTGCAAATTAATTGCTGGGACTGTGCGAAATTTCTCTGTGATTTTCATCTGATTAGATAAGTCTAACATTTGTAATGACTGATTTTTACCTTCTAGATTGAGATTGTGCTGGGGAAAACTGAAAACTTCGATGAACTGATGGCTGCTGCTGCAGAGGAAAGAGAAAACGAAGATGGTGAAGAGCAGAGTTGAAAAGGTTTTTTTTTTTTCTTTTTTGTTCTTATCCTCCTTGTGGATGACTCTTGTTCTTTCCTTATATCTGGTCTCTCTGTTGTTAATTACGTTAGTAAACAAGTGGTTCATTTACTGATGTAGGTTTTTTAGTTGGGGAATCATTGACTTGCCCATTTTTAGGTACCATGGGATATCTTTGTTTAAGAGAGTGGAAACATAATCTGATTCTTCAGTTTTGGTAAATATGCATTCGATAGATGATCTGCTTCAGAAATTTAAACTGCATTCAAAGTATTTTTACATGTAGTACGATTTAACCTTGTTTCCCACAATCTGATAATCACTTTGGACGAACTGCACATGTAAGGTCAAAAGAGAATGCTTTTGAGAAACATGTTTTTTCATGGCATGGTACTCTCCTAACCGATCCCACATTGGGTTCCATTTATTTGTCCTCAAGTCTGATACAGTGGGGAAGTGCCCTTTTTTTTTTGTATTCTCTTCATCAAAGTAGCTAATATACCGTATTGGTACAATTGAAGCATCTTCTTCTTTCTCGATCTCAGTATTCTCTTTGATACTCTCTCTATAAAGCACAGGAAAACTATTCCTACGGCTTGGACAAGCTTAAAGTAGCTTTCCTCCCGTGCGTAAACTTTCTTGTTAGATCACACGTCGGTTGGAGAGGGGAACAAAATATTCCTTATAAGAGTGTGGAAACCTCTCCCTGGTGGATGCGTTTTTAAACTTTGAGGGGAAGTTCGAAAGGGAAAGTCCAAAGAGGACAATATCNGATGGGTAGGTTTTCTATACTGTTTTTACTCCTAATATTAATGGCTATCCATTTTGAGAAGTGCGGATTTGCCTCATAGCCATAGTATGTTTATTCAAGTTTGAAACTGGGACACTTGAATACTCTGCTTAAATGATGGATTTTTTGTAATGTTCTCATGTGGGTAGTCGACTTTTCATTGTTTTTTATGCGACAATTGAAACATTTTTCTATTTGAATTTCAATGCAGTCAATTGATCCTTTCAAATGGTGGTTTGGGTTATTAGTATGTTAAAACTTCTATGTATGCCTTTGCAGCCATTGCAACTGTTGTGACTGTTGCGGAAATTCTGAAAAACAATGGACTGGCTTTAGAAAAGAGTAAATATCCTCTTCCTTCTTTTTTTGGAATATACTATTGGGGCTACCTCTTAGAGATAATGACTTCTTTAGAGATGATGAATATAATTTTGAATGCTCACAAAAATTTTCTTATCTTCTATAGAGATAATGACTTCTACTGTTGATATCAAGGATGATTCTCGAGGGAGACCAGTTCAAAAAGCTAAGGTAATACGTCGTACTGCTTTCTTGCTTTGTTACTTCACAATGGATGATAATTTGGAAGCTGCCTCTCTCGTTTTTTCTCCCTTAAAAGAAACATTGCAAGAGATTTCTCTCTCGTATTTTGGCACATAAAAGTATACCCTCGTGTAACTTCCAATCCGATTTATCACGTTTATTTACTTTCATATTTGGACCCTAGAAATTAGTGGTGTGGGTTACAGACGTTTATTCACTGAGCGTGCAAATTAATTGCTGGGACTGTGCGAAATTTCTCTGTGATTTTCATCTGATTAGATAAGTCTAACATTTGTAATGACTGATTTTTACCTTCTAGATTGAGATTGTGCTGGGGAAAACTGAAAACTTCGATGAACTGATGGCTGCTGCTGCAGAGGAAAGAGAAAACGAAGATGGTGAAGAGCAGAGTTGAAAAGGTTTTTTTTTTTTCTTTTTTGTTCTTATCCTCCTTGTGGATGACTCTTGTTCTTTCCTTATATCTGGTCTCTCTGTTGTTAATTACGTTAGTAAACAAGTGGTTCATTTACTGATGTAGGTTTTTTAGTTGGGGAATCATTGACTTGCCCATTTTTAGGTACCATGGGATATCTTTGTTTAAGAGAGTGGAAACATAATCTGATTCTTCAGTTTTGGTAAATATGCATTCGATAGATGATCTGCTTCAGAAATTTAAACTGCATTCAAAGTATTTTTACATGTAGTACGATTTAACCTTGTTTCCCACAATCTGATAATCACTTTGGACGAACTGCACATGTAAGGTCAAAAGAGAATGCTTTTGAGAAACATGTTTTTTCATGGCATGGTACTCTCCTAACCGATCCCACATTGGGTTCCATTTATTTGTCCTCAAGTCTGATACAGTGGGGAAGTGCCCTTTTTTTTTTGTATTCTCTTCATCAAAGTAGCTAATATACCGTATTGGTACAATTGAAGCATCTTCTTCTTTCTCGATCTCAGTATTCTCTTTGATACTCTCTCTATAAAGCACAGGAAAACTATTCCTACGGCTTGGACAAGCTTAAAGTAGCTTTCCTCCCGTGCGTAAACTTTCTTGTTAGATCACACGTCGGTTGGAGAGGGGAACAAAATATTCCTTATAAGAGTGTGGAAACCTCTCCCTGGTGGATGCGTTTTTAAACTTTGAGGGGAAGTTCGAAAGGGAAAGTCCAAAGAGGACAATATCCGAGCGAGACATCGGTAGTGCGCCAGGGAGGACGCTAGGCCTCCAAGGGGATGGATTGTGAGATCTCACATAGGTTGGAGAGGAACAAAACATTTCTTAGAAGGGTGTGGAAACTCTCCTTGTTGGACGTGTTTTAAAATCTTGAGGGAGAGCTCGAAAGGAATAGTCTAAAAAATACAATATCTGCTAGCGGTGGGCTTAAAATTTGGAAGTCCCTCTCCTTTGGTCTCCTTGTTCTTAATTATTTTTTCCGTTCTTATCCTCCTTGCTTGTGGGTTATCGCTGATAACAGTTACAAACTATGGTGCTTAGGAATCGCTTCCATCAACAAAGCTAAAGGAAAGAGAAGACAAAACATGTTATTACTTCATGGCACAGAGAATATCACTCAATAGAGCAGGTTTCAAACTCTGTATTAGTTCCATTTGGCAACGTGATGCTCGAATTCAGCTATTTAAACTGTACTTTATGTATGACCATGAACCTCTTTTTGTCACTGAAAATTTGTGGTTTTAGTCAATTTTTATCTCTTAGATATTGAAAATTTGTGATTCATTTTTGTCGATTGTTAGAGAATTATAAGATT

mRNA sequence

AAATTAAAGAAAGTCCATCACTTTCACTCTCCTTTCTCATAGTCGCACTTCCAGAAGTGAGTGTTAGGGTTAGGGTTTTAGGTTTCAGAAGCTCGATGGAAGAGATTACAGAGGGTGTCAACTCCATTGCATTGACAGCTGATTCGCAGAAGAAGAATCGAATTCAAGTCTCCAACACCAAGAAGCCCCTATTCTTCTATGTTAATCTCGCCAAGAGGTATATGCAGCAGTACAATGAGGTCGAGCTTTCTGCGCTTGGGATGGCCATTGCAACTGTTGTGACTGTTGCGGAAATTCTGAAAAACAATGGACTGGCTTTAGAAAAGAAGATAATGACTTCTACTGTTGATATCAAGGATGATTCTCGAGGGAGACCAGTTCAAAAAGCTAAGATTGAGATTGTGCTGGGGAAAACTGAAAACTTCGATGAACTGATGGCTGCTGCTGCAGAGGAAAGAGAAAACGAAGATGCCATTGCAACTGTTGTGACTGTTGCGGAAATTCTGAAAAACAATGGACTGGCTTTAGAAAAGAAGATAATGACTTCTACTGTTGATATCAAGGATGATTCTCGAGGGAGACCAGTTCAAAAAGCTAAGATTGAGATTGTGCTGGGGAAAACTGAAAACTTCGATGAACTGATGGCTGCTGCTGCAGAGGAAAGAGAAAACGAAGATGGTGAAGAGCAGAGTTGAAAAGGAATCGCTTCCATCAACAAAGCTAAAGGAAAGAGAAGACAAAACATGTTATTACTTCATGGCACAGAGAATATCACTCAATAGAGCAGGTTTCAAACTCTGTATTAGTTCCATTTGGCAACGTGATGCTCGAATTCAGCTATTTAAACTGTACTTTATGTATGACCATGAACCTCTTTTTGTCACTGAAAATTTGTGGTTTTAGTCAATTTTTATCTCTTAGATATTGAAAATTTGTGATTCATTTTTGTCGATTGTTAGAGAATTATAAGATT

Coding sequence (CDS)

ATGGAAGAGATTACAGAGGGTGTCAACTCCATTGCATTGACAGCTGATTCGCAGAAGAAGAATCGAATTCAAGTCTCCAACACCAAGAAGCCCCTATTCTTCTATGTTAATCTCGCCAAGAGGTATATGCAGCAGTACAATGAGGTCGAGCTTTCTGCGCTTGGGATGGCCATTGCAACTGTTGTGACTGTTGCGGAAATTCTGAAAAACAATGGACTGGCTTTAGAAAAGAAGATAATGACTTCTACTGTTGATATCAAGGATGATTCTCGAGGGAGACCAGTTCAAAAAGCTAAGATTGAGATTGTGCTGGGGAAAACTGAAAACTTCGATGAACTGATGGCTGCTGCTGCAGAGGAAAGAGAAAACGAAGATGCCATTGCAACTGTTGTGACTGTTGCGGAAATTCTGAAAAACAATGGACTGGCTTTAGAAAAGAAGATAATGACTTCTACTGTTGATATCAAGGATGATTCTCGAGGGAGACCAGTTCAAAAAGCTAAGATTGAGATTGTGCTGGGGAAAACTGAAAACTTCGATGAACTGATGGCTGCTGCTGCAGAGGAAAGAGAAAACGAAGATGGTGAAGAGCAGAGTTGA

Protein sequence

MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEERENEDAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEERENEDGEEQS

Homology

[Close]

BLAST of Cp4.1LG18g04880 vs. ExPASy Swiss-Prot
Match: O22969 (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 PE=1 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 7.1e-51
Identity = 106/126 (84.13%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEIT+GVN++ L  DSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYN+VELSALGMAIAT
Sbjct: 1   MEEITDGVNNMNLATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTV EILKNNG A+EKKIMTSTVDIKDD+RGRPVQKAKIEI L K+E FDELMAAA EE
Sbjct: 61  VVTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEE 120

Query: 121 RENEDA 127
           +E+ +A
Sbjct: 121 KEDAEA 126

[Close]

BLAST of Cp4.1LG18g04880 vs. NCBI nr
Match: XP_022961070.1 (uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023516863.1 uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo] >XP_023516864.1 uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo] >XP_023516865.1 uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo] >KAG6589857.1 hypothetical protein SDJN03_15280, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023529.1 hypothetical protein SDJN02_14555 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 234 bits (596), Expect = 7.52e-76
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT
Sbjct: 1   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120

Query: 121 RENED 125
           RENED
Sbjct: 121 RENED 125

[Close]

BLAST of Cp4.1LG18g04880 vs. NCBI nr
Match: XP_004150019.1 (uncharacterized protein At2g34160 [Cucumis sativus] >XP_008444017.1 PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo] >XP_022144816.1 uncharacterized protein At2g34160-like [Momordica charantia] >XP_038878653.1 uncharacterized protein At2g34160-like [Benincasa hispida] >KAA0046788.1 Alba domain-containing protein [Cucumis melo var. makuwa] >KGN65316.1 hypothetical protein Csa_020079 [Cucumis sativus] >TYK29659.1 Alba domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 232 bits (592), Expect = 3.06e-75
Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 0


Query: 1   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVNSI LTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT
Sbjct: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120

Query: 121 RENED 125
           RENED
Sbjct: 121 RENED 125

[Close]

BLAST of Cp4.1LG18g04880 vs. NCBI nr
Match: XP_022987902.1 (uncharacterized protein At2g34160-like [Cucurbita maxima] >XP_022987903.1 uncharacterized protein At2g34160-like [Cucurbita maxima])

HSP 1 Score: 232 bits (591), Expect = 4.34e-75
Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 0


Query: 1   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT
Sbjct: 1   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAA EE
Sbjct: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAEEE 120

Query: 121 RENED 125
           RENED
Sbjct: 121 RENED 125

[Close]

BLAST of Cp4.1LG18g04880 vs. NCBI nr
Match: XP_022924689.1 (uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023529342.1 uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo] >KAG7021810.1 hypothetical protein SDJN02_15538 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 231 bits (589), Expect = 8.75e-75
Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 0


Query: 1   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT
Sbjct: 1   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120

Query: 121 RENED 125
           REN D
Sbjct: 121 RENGD 125

[Close]

BLAST of Cp4.1LG18g04880 vs. NCBI nr
Match: XP_022972044.1 (uncharacterized protein At2g34160-like [Cucurbita maxima])

HSP 1 Score: 231 bits (589), Expect = 9.66e-75
Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 0


Query: 1   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT
Sbjct: 4   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 63

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE
Sbjct: 64  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 123

Query: 121 RENED 125
           REN D
Sbjct: 124 RENGD 128

[Close]

BLAST of Cp4.1LG18g04880 vs. ExPASy TrEMBL
Match: A0A6J1HAY2 (uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC111461689 PE=4 SV=1)

HSP 1 Score: 234 bits (596), Expect = 3.64e-76
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT
Sbjct: 1   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120

Query: 121 RENED 125
           RENED
Sbjct: 121 RENED 125

[Close]

BLAST of Cp4.1LG18g04880 vs. ExPASy TrEMBL
Match: A0A5A7TV88 (Alba domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00010 PE=4 SV=1)

HSP 1 Score: 232 bits (592), Expect = 1.48e-75
Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 0


Query: 1   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVNSI LTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT
Sbjct: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120

Query: 121 RENED 125
           RENED
Sbjct: 121 RENED 125

[Close]

BLAST of Cp4.1LG18g04880 vs. ExPASy TrEMBL
Match: A0A0A0LZB6 (Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G320340 PE=4 SV=1)

HSP 1 Score: 232 bits (592), Expect = 1.48e-75
Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 0


Query: 1   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVNSI LTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT
Sbjct: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120

Query: 121 RENED 125
           RENED
Sbjct: 121 RENED 125

[Close]

BLAST of Cp4.1LG18g04880 vs. ExPASy TrEMBL
Match: A0A6J1CUJ0 (uncharacterized protein At2g34160-like OS=Momordica charantia OX=3673 GN=LOC111014408 PE=4 SV=1)

HSP 1 Score: 232 bits (592), Expect = 1.48e-75
Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 0


Query: 1   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVNSI LTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT
Sbjct: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120

Query: 121 RENED 125
           RENED
Sbjct: 121 RENED 125

[Close]

BLAST of Cp4.1LG18g04880 vs. ExPASy TrEMBL
Match: A0A1S3B8Y2 (uncharacterized protein At2g34160-like OS=Cucumis melo OX=3656 GN=LOC103487464 PE=4 SV=1)

HSP 1 Score: 232 bits (592), Expect = 1.48e-75
Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 0


Query: 1   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVNSI LTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT
Sbjct: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120

Query: 121 RENED 125
           RENED
Sbjct: 121 RENED 125

[Close]

BLAST of Cp4.1LG18g04880 vs. TAIR 10
Match: AT1G29250.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 202.2 bits (513), Expect = 3.9e-52
Identity = 107/126 (84.92%), Postives = 115/126 (91.27%), Query Frame = 0


Query: 1   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVN++ L  D+QKKNRIQVSNTKKPLFFYVNLAKRYMQQY +VELSALGMAIAT
Sbjct: 1   MEEITEGVNNMNLAVDTQKKNRIQVSNTKKPLFFYVNLAKRYMQQYTDVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNG A+EKKIMTSTVDIKDDSRGRPVQKAKIEI L K+E FDELMAAA EE
Sbjct: 61  VVTVAEILKNNGFAVEKKIMTSTVDIKDDSRGRPVQKAKIEITLAKSEKFDELMAAANEE 120

Query: 121 RENEDA 127
           +E  +A
Sbjct: 121 KEAAEA 126

[Close]

BLAST of Cp4.1LG18g04880 vs. TAIR 10
Match: AT2G34160.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 201.8 bits (512), Expect = 5.0e-52
Identity = 106/126 (84.13%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEIT+GVN++ L  DSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYN+VELSALGMAIAT
Sbjct: 1   MEEITDGVNNMNLATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTV EILKNNG A+EKKIMTSTVDIKDD+RGRPVQKAKIEI L K+E FDELMAAA EE
Sbjct: 61  VVTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEE 120

Query: 121 RENEDA 127
           +E+ +A
Sbjct: 121 KEDAEA 126

[Close]

BLAST of Cp4.1LG18g04880 vs. TAIR 10
Match: AT3G04620.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 154.5 bits (389), Expect = 9.2e-38
Identity = 78/112 (69.64%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 14  TADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGL 73
           T ++ KKNRIQVSNTKKPLFFYVNLAKRY+QQ+NEVELSALGMAI TVVT++EILKNNGL
Sbjct: 31  TVETHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTISEILKNNGL 90

Query: 74  ALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEERENED 126
           A EKK++TSTV +KD+++G+ VQKAKIEIVLGK++ FD L+      +  E+
Sbjct: 91  ATEKKVLTSTVGMKDETKGKMVQKAKIEIVLGKSDKFDSLVPPVTNGKTPEE 142

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g04880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22969	7.1e-51	84.13	Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 P...	[more]

BLAST of Cp4.1LG18g04880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961070.1	7.52e-76	100.00	uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023516863.1 unch...	[more]
XP_004150019.1	3.06e-75	99.20	uncharacterized protein At2g34160 [Cucumis sativus] >XP_008444017.1 PREDICTED: u...	[more]
XP_022987902.1	4.34e-75	99.20	uncharacterized protein At2g34160-like [Cucurbita maxima] >XP_022987903.1 unchar...	[more]
XP_022924689.1	8.75e-75	99.20	uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023529342.1 unch...	[more]
XP_022972044.1	9.66e-75	99.20	uncharacterized protein At2g34160-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG18g04880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAY2	3.64e-76	100.00	uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A5A7TV88	1.48e-75	99.20	Alba domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0LZB6	1.48e-75	99.20	Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G320340 PE=4 S...	[more]
A0A6J1CUJ0	1.48e-75	99.20	uncharacterized protein At2g34160-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A1S3B8Y2	1.48e-75	99.20	uncharacterized protein At2g34160-like OS=Cucumis melo OX=3656 GN=LOC103487464 P...	[more]

BLAST of Cp4.1LG18g04880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29250.1	3.9e-52	84.92	Alba DNA/RNA-binding protein	[more]
AT2G34160.1	5.0e-52	84.13	Alba DNA/RNA-binding protein	[more]
AT3G04620.1	9.2e-38	69.64	Alba DNA/RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036882	Alba-like domain superfamily	GENE3D	3.30.110.20		coord: 19..124 e-value: 2.4E-56 score: 190.6 coord: 125..199 e-value: 2.5E-29 score: 103.6
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 126..184
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 20..115
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 21..74 e-value: 2.7E-12 score: 46.3
None	No IPR available	PANTHER	PTHR31947:SF32	SUBFAMILY NOT NAMED	coord: 126..199 coord: 1..125
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PANTHER	PTHR31947	DNA/RNA-BINDING PROTEIN ALBA 3	coord: 126..199 coord: 1..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g04880.1	Cp4.1LG18g04880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding