Cp4.1LG18g03010 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGGCCTTCACTACAAATTCTTCCCCACCGACTTCCTCTACCCTCGTCCGCCCTCCTCCGACGTCGCCGACAACATCGTCTCCGTCGTGCCCCCCAAATCGGACGACTCCTCCGCCAACTCCAAGGGACGCCTCCACCGCCAACCCTTTCTTCACGCCAACAACAAACCTGCTGTTCAACCTATTGTCGCCCCAACTCCAAAGCCATCCAATTTCTAA ATGGCAGGCCTTCACTACAAATTCTTCCCCACCGACTTCCTCTACCCTCGTCCGCCCTCCTCCGACGTCGCCGACAACATCGTCTCCGTCGTGCCCCCCAAATCGGACGACTCCTCCGCCAACTCCAAGGGACGCCTCCACCGCCAACCCTTTCTTCACGCCAACAACAAACCTGCTGTTCAACCTATTGTCGCCCCAACTCCAAAGCCATCCAATTTCTAA ATGGCAGGCCTTCACTACAAATTCTTCCCCACCGACTTCCTCTACCCTCGTCCGCCCTCCTCCGACGTCGCCGACAACATCGTCTCCGTCGTGCCCCCCAAATCGGACGACTCCTCCGCCAACTCCAAGGGACGCCTCCACCGCCAACCCTTTCTTCACGCCAACAACAAACCTGCTGTTCAACCTATTGTCGCCCCAACTCCAAAGCCATCCAATTTCTAA MAGLHYKFFPTDFLYPRPPSSDVADNIVSVVPPKSDDSSANSKGRLHRQPFLHANNKPAVQPIVAPTPKPSNF Homology
BLAST of Cp4.1LG18g03010 vs. NCBI nr
Match: KAG6581666.1 (putative galacturonosyltransferase 14, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 119 bits (298), Expect = 2.36e-29 Identity = 60/70 (85.71%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of Cp4.1LG18g03010 vs. NCBI nr
Match: KGN59725.1 (hypothetical protein Csa_002570 [Cucumis sativus]) HSP 1 Score: 75.1 bits (183), Expect = 8.09e-16 Identity = 46/76 (60.53%), Postives = 50/76 (65.79%), Query Frame = 0
BLAST of Cp4.1LG18g03010 vs. NCBI nr
Match: KAA0057217.1 (hypothetical protein E6C27_scaffold280G00510 [Cucumis melo var. makuwa]) HSP 1 Score: 73.2 bits (178), Expect = 4.92e-15 Identity = 47/81 (58.02%), Postives = 50/81 (61.73%), Query Frame = 0
BLAST of Cp4.1LG18g03010 vs. NCBI nr
Match: EXB93981.1 (hypothetical protein L484_015529 [Morus notabilis]) HSP 1 Score: 50.4 bits (119), Expect = 7.40e-06 Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 0
BLAST of Cp4.1LG18g03010 vs. NCBI nr
Match: KAF9679581.1 (hypothetical protein SADUNF_Sadunf06G0029700 [Salix dunnii]) HSP 1 Score: 50.1 bits (118), Expect = 3.53e-05 Identity = 28/74 (37.84%), Postives = 37/74 (50.00%), Query Frame = 0
BLAST of Cp4.1LG18g03010 vs. ExPASy TrEMBL
Match: A0A0A0LCI2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G841490 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 3.92e-16 Identity = 46/76 (60.53%), Postives = 50/76 (65.79%), Query Frame = 0
BLAST of Cp4.1LG18g03010 vs. ExPASy TrEMBL
Match: A0A5A7URF0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G00510 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 2.38e-15 Identity = 47/81 (58.02%), Postives = 50/81 (61.73%), Query Frame = 0
BLAST of Cp4.1LG18g03010 vs. ExPASy TrEMBL
Match: W9RJF3 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_015529 PE=4 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 3.58e-06 Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 0
BLAST of Cp4.1LG18g03010 vs. ExPASy TrEMBL
Match: W9RUL8 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_015527 PE=4 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 4.05e-05 Identity = 23/37 (62.16%), Postives = 27/37 (72.97%), Query Frame = 0
BLAST of Cp4.1LG18g03010 vs. ExPASy TrEMBL
Match: A0A6N2K8V5 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS12679 PE=4 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 6.84e-05 Identity = 29/74 (39.19%), Postives = 34/74 (45.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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