Cp4.1LG18g00660 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAACAAAGCCTTAGTTGGATAGCCAAAATGATGCTCTTTTTGTTCGAGTATTCCTTTAGAACACTTATGAGTATTCAAAATGGGAATCTAAAACCCAACTTCTAAAGCAAACACACAAAATAAAGTGTTCAATTATAATATTTATAGCAATGGAAACTCAACTTTATCACACACTTTTATGTTCTTCGCCTCTTTTTATTGCTTTGGGTTCGCAGTTTATTTGTGAATTGTTTCCCACAAATATGAGAGTGTTTGCTTTGTTCTTCTTTGTTGTCGTTGCCACCTTCCTCCTTCTGCCTAATGCTGTTCTTTGTGATGGTATGATTTTCGTCGTTATTTTTCTTTTAACGTTCGTAGCTATTCATCGAAGAATATTGCATGTGTTCGATTACAAGGCTTCTTATTTTGATATGACGTTTATGTATCGTTCAATTTGATAGCTTAAACAGATAAGATTAGAGGTGTTTACGGGATAGGAGGGGTAGGAACGGTAATCCTTCTTCATTNCTAATGCTGTTCTTTGTGATGGTATGATTTTCGTCGTTATTTTTCTTTTAACGTTCGTAGCTATTCATCGAAGAATATTGCATGTGTTCGATTACAAGACTTCTTATTTTGATATGACGTTTATGTATCGTTCAATTTTATAGCTTAAACAGATAAAATTAGAGGTGTTTACGGGATAGGAGGGGTAGGAACGGTAATCCTTCTTCATCCTCGTTCTTTGAAGTTTCTCATTTATTTTCGTACGGATTGAATTTATCCCGAAGAATTTTTTTTCCATTTTATATATTTTTTCGAAAATATATACTATACAAAAAAAAAAATTTAATAATATATTAGAAATCAAAATATAATATAATATTAAATATAATTTCTAAGAACTCAAATTTCAATACTACGTGATTACGTATTCCACAAATGAATATATATTCAAAGTGGGTGGGCGGGGCAAAGAATAGTATCCATGGTTTCGAATCCCATTTAGCTAGCTGAGCTATATCTCTCCACTCGCTCTCTCATTCCCTATTTGAAAGTAGTCTCTGAAATAGGGTAAAAAGAGGTGATTTAAATCATTACTATTTGACTCAGACCTGTTCTAAAAAAGTAGACGCATTTCAAATTGTTTGTTGACACGGACAAAGTCAAGGAAAACCTCTGAAATTATTTCAATATTGGACCTTGGACATATAATAGTTCCGAATCGAATCTCTTTAGAAAGAAGATCTTTTGTAGATTCGATAAGATCTCACATAAGTTGAAGAGGGAACGAAACAATTTTTTATAACTGTATGAAAATCTCTCTCTATCAAACACGTTTTAAAAACCTTGGGAGAAGTTCGAAAGAGAAAGCTCGAAGAGGACAATATCTGTTAGCAGTGGGCTTAAGCCATTACAAATGGTATCAAAACCAAATAACGAACAGTGTGTCAGAAAGAACGCTGAGCCCCAAAGGGAGTAGACACCGAGCAGTGTCCCAACAAGGATGTTGGGCCCTAAAGGGGGTGGACCCTAACAGTGTGCTAGGGAGAACATTGGGTCTCGAGAGGGGAACTAAGCATTCTTTATAAGCCCAAAGAGAACAATATCTGCTAGTAGTGGGCTTGAGCCGTTACAAATAGTATCAGAACCAAATAACGAGCGGTGTGCCAGAAAGGACGCTGAGCCCCAAAGGGAGTAGACACCGGACAGTGTCCCAGTAAGGATGTTGGACCCTAAAGAGGGTGGGCCCTAACAGTGTGCTAGGGAGAACATTGGGCCTCGAGAGGGGGAACTAAGCATTCTTTATAAATATGTGGAAACCTCTCTCTAGCATACGTGTTTTAAAAACCTTGATGGGTAGTCTTTTAAAGAAAACAATATCGGCTAGTGGTGGATTTAGGCCGTTACAAATGATATCAGAACCAAATAACAGGCGGTGTGCCAGAAAGGACGCTGAGCCCCAATTGGAATAGACACCGGTGAGTGTCCCAGCAAGTATGTTGGGCCCTAAAGGGGGTGGGCCCTAACAGTGTGCTGGGGAGAACGTTGGGCCTCGAGAGGGGAACTAAGTATTCTTTATAAGAGTGTGAAAACCTTTTTCTAGCATATGTGTTTCAAAAACCTTGATGGGTAGTCTCCCAAAGAAAACAATATCGGCTAGCGGTGGGCCCTAACAGTGTGCTAGGGAGAACATTGGGCCTCGAGAGAGGAACTGAATATTCTTTATAAGGGTGTGGAAATCTCTCTCTAGCATACGTGTTTTAAAAACCTCGATGGGAAGTCTCCCAAAGAAAACAATATCTGGTAGCGGTGGGTTTAGACCGTTGGGGGTAGATCTAGACGAATTAAATAAATAAATTATAACGAATTTAATTAGTGTTTCATATTCTTAATGAAGTTACATGGACACCGCACTAAACAATACCAATGCCTCACATGGCTTAGTTTTCTTGTGCAGTGAAAGATACAGAGATTCTAAACGCCATCAACAATTACAGACAATCAAAGCACCTATCTAATCTTACTCATAACAAAAATGCAGCATGTTTAGCAAGCAGGTTCGTTTATAAGCTAAGAGATGAGCCTTGTTCAAGTCCAGATGATTTCCACAAAGAAATCAACTCTGAAAATACCCTTGCAGATTTTCTTAAGCTCTTGAAGAAGTGTCACATAGCCTACAACTCGACCGTTGATGGCATCATGCTCCCCGCTTGCGTCCCCCACCTCGATCCCAAGTCCGTCTCCAGTAACTATACCAAATCCCGTGACGTCGAGTATATTAGCAGTAAGAACTTTACGGGCGCTGGGGTCGGGACGTCTGACGATTGGATCGTCCTCGTTCTTAGCACTAACACGTCGACTGGGAACTTTGCTAACGGTGGATCTTCGTCTTTGGTTGTCGCCCGGGGTGGTTGCATTGGTATCATGGTTGGTTTCTTAGGGTTGTTTGTTCTTTTGTTGTTTTGATGAGGTGAGGGAAAAGGCTTTTGGGTTTGGGTTTAAAGCATTGTATTTATCAGTCTATTATAAAAGATTAATAGAGTTGTACATGGGTCCAGTTACTGAATTGGTAACCTAAATAACACAATTGTTTCACAACTCGATCCTACTTAACCCTATCGGGTTGGATTGAATTAGGTTGTTTTTAAAAATAAATTATACTCACAATATATAATCAT GAACAAAGCCTTAGTTGGATAGCCAAAATGATGCTCTTTTTGTTCGAGTATTCCTTTAGAACACTTATGAGTATTCAAAATGGGAATCTAAAACCCAACTTCTAAAGCAAACACACAAAATAAAGTGTTCAATTATAATATTTATAGCAATGGAAACTCAACTTTATCACACACTTTTATGTTCTTCGCCTCTTTTTATTGCTTTGGGTTCGCAGTTTATTTGTGAATTGTTTCCCACAAATATGAGAGTGTTTGCTTTGTTCTTCTTTGTTGTCGTTGCCACCTTCCTCCTTCTGCCTAATGCTGTTCTTTGTGATGTGAAAGATACAGAGATTCTAAACGCCATCAACAATTACAGACAATCAAAGCACCTATCTAATCTTACTCATAACAAAAATGCAGCATGTTTAGCAAGCAGGTTCGTTTATAAGCTAAGAGATGAGCCTTGTTCAAGTCCAGATGATTTCCACAAAGAAATCAACTCTGAAAATACCCTTGCAGATTTTCTTAAGCTCTTGAAGAAGTGTCACATAGCCTACAACTCGACCGTTGATGGCATCATGCTCCCCGCTTGCGTCCCCCACCTCGATCCCAAGTCCGTCTCCAGTAACTATACCAAATCCCGTGACGTCGAGTATATTAGCAGTAAGAACTTTACGGGCGCTGGGGTCGGGACGTCTGACGATTGGATCGTCCTCGTTCTTAGCACTAACACGTCGACTGGGAACTTTGCTAACGGTGGATCTTCGTCTTTGGTTGTCGCCCGGGGTGGTTGCATTGGTATCATGGTTGGTTTCTTAGGGTTGTTTGTTCTTTTGTTGTTTTGATGAGGTGAGGGAAAAGGCTTTTGGGTTTGGGTTTAAAGCATTGTATTTATCAGTCTATTATAAAAGATTAATAGAGTTGTACATGGGTCCAGTTACTGAATTGGTAACCTAAATAACACAATTGTTTCACAACTCGATCCTACTTAACCCTATCGGGTTGGATTGAATTAGGTTGTTTTTAAAAATAAATTATACTCACAATATATAATCAT ATGGAAACTCAACTTTATCACACACTTTTATGTTCTTCGCCTCTTTTTATTGCTTTGGGTTCGCAGTTTATTTGTGAATTGTTTCCCACAAATATGAGAGTGTTTGCTTTGTTCTTCTTTGTTGTCGTTGCCACCTTCCTCCTTCTGCCTAATGCTGTTCTTTGTGATGTGAAAGATACAGAGATTCTAAACGCCATCAACAATTACAGACAATCAAAGCACCTATCTAATCTTACTCATAACAAAAATGCAGCATGTTTAGCAAGCAGGTTCGTTTATAAGCTAAGAGATGAGCCTTGTTCAAGTCCAGATGATTTCCACAAAGAAATCAACTCTGAAAATACCCTTGCAGATTTTCTTAAGCTCTTGAAGAAGTGTCACATAGCCTACAACTCGACCGTTGATGGCATCATGCTCCCCGCTTGCGTCCCCCACCTCGATCCCAAGTCCGTCTCCAGTAACTATACCAAATCCCGTGACGTCGAGTATATTAGCAGTAAGAACTTTACGGGCGCTGGGGTCGGGACGTCTGACGATTGGATCGTCCTCGTTCTTAGCACTAACACGTCGACTGGGAACTTTGCTAACGGTGGATCTTCGTCTTTGGTTGTCGCCCGGGGTGGTTGCATTGGTATCATGGTTGGTTTCTTAGGGTTGTTTGTTCTTTTGTTGTTTTGA METQLYHTLLCSSPLFIALGSQFICELFPTNMRVFALFFFVVVATFLLLPNAVLCDVKDTEILNAINNYRQSKHLSNLTHNKNAACLASRFVYKLRDEPCSSPDDFHKEINSENTLADFLKLLKKCHIAYNSTVDGIMLPACVPHLDPKSVSSNYTKSRDVEYISSKNFTGAGVGTSDDWIVLVLSTNTSTGNFANGGSSSLVVARGGCIGIMVGFLGLFVLLLF Homology
BLAST of Cp4.1LG18g00660 vs. ExPASy Swiss-Prot
Match: P59833 (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 GN=At5g19250 PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.6e-22 Identity = 68/197 (34.52%), Postives = 107/197 (54.31%), Query Frame = 0
BLAST of Cp4.1LG18g00660 vs. ExPASy Swiss-Prot
Match: Q84MC0 (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 GN=At3g06035 PE=2 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.1e-22 Identity = 66/196 (33.67%), Postives = 113/196 (57.65%), Query Frame = 0
BLAST of Cp4.1LG18g00660 vs. ExPASy Swiss-Prot
Match: Q84VZ5 (Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana OX=3702 GN=At5g19240 PE=2 SV=2) HSP 1 Score: 92.4 bits (228), Expect = 6.9e-18 Identity = 59/165 (35.76%), Postives = 91/165 (55.15%), Query Frame = 0
BLAST of Cp4.1LG18g00660 vs. ExPASy Swiss-Prot
Match: Q8GUL8 (Uncharacterized GPI-anchored protein At5g19230 OS=Arabidopsis thaliana OX=3702 GN=At5g19230 PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 5.1e-13 Identity = 62/198 (31.31%), Postives = 94/198 (47.47%), Query Frame = 0
BLAST of Cp4.1LG18g00660 vs. NCBI nr
Match: XP_022961524.1 (uncharacterized GPI-anchored protein At5g19250-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 431 bits (1109), Expect = 3.92e-152 Identity = 218/225 (96.89%), Postives = 222/225 (98.67%), Query Frame = 0
BLAST of Cp4.1LG18g00660 vs. NCBI nr
Match: XP_023516540.1 (uncharacterized GPI-anchored protein At5g19250-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 378 bits (971), Expect = 1.40e-131 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of Cp4.1LG18g00660 vs. NCBI nr
Match: KAG7023953.1 (putative GPI-anchored protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 369 bits (948), Expect = 4.50e-128 Identity = 187/194 (96.39%), Postives = 191/194 (98.45%), Query Frame = 0
BLAST of Cp4.1LG18g00660 vs. NCBI nr
Match: KAG6590391.1 (putative GPI-anchored protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 367 bits (943), Expect = 2.60e-127 Identity = 186/194 (95.88%), Postives = 191/194 (98.45%), Query Frame = 0
BLAST of Cp4.1LG18g00660 vs. NCBI nr
Match: XP_022961525.1 (uncharacterized GPI-anchored protein At3g06035-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 362 bits (930), Expect = 2.77e-125 Identity = 190/225 (84.44%), Postives = 194/225 (86.22%), Query Frame = 0
BLAST of Cp4.1LG18g00660 vs. ExPASy TrEMBL
Match: A0A6J1HEB1 (uncharacterized GPI-anchored protein At5g19250-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462076 PE=4 SV=1) HSP 1 Score: 431 bits (1109), Expect = 1.90e-152 Identity = 218/225 (96.89%), Postives = 222/225 (98.67%), Query Frame = 0
BLAST of Cp4.1LG18g00660 vs. ExPASy TrEMBL
Match: A0A6J1HCG9 (uncharacterized GPI-anchored protein At3g06035-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462076 PE=4 SV=1) HSP 1 Score: 362 bits (930), Expect = 1.34e-125 Identity = 190/225 (84.44%), Postives = 194/225 (86.22%), Query Frame = 0
BLAST of Cp4.1LG18g00660 vs. ExPASy TrEMBL
Match: A0A6J1HY77 (uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita maxima OX=3661 GN=LOC111467926 PE=4 SV=1) HSP 1 Score: 345 bits (885), Expect = 8.37e-119 Identity = 177/194 (91.24%), Postives = 186/194 (95.88%), Query Frame = 0
BLAST of Cp4.1LG18g00660 vs. ExPASy TrEMBL
Match: A0A5D3CFH2 (Putative GPI-anchored protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003820 PE=4 SV=1) HSP 1 Score: 263 bits (673), Expect = 2.60e-86 Identity = 132/190 (69.47%), Postives = 161/190 (84.74%), Query Frame = 0
BLAST of Cp4.1LG18g00660 vs. ExPASy TrEMBL
Match: A0A1S3BQD0 (uncharacterized GPI-anchored protein At5g19250-like OS=Cucumis melo OX=3656 GN=LOC103492177 PE=4 SV=1) HSP 1 Score: 263 bits (673), Expect = 2.60e-86 Identity = 132/190 (69.47%), Postives = 161/190 (84.74%), Query Frame = 0
BLAST of Cp4.1LG18g00660 vs. TAIR 10
Match: AT5G19250.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 107.8 bits (268), Expect = 1.1e-23 Identity = 68/197 (34.52%), Postives = 107/197 (54.31%), Query Frame = 0
BLAST of Cp4.1LG18g00660 vs. TAIR 10
Match: AT3G06035.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 107.5 bits (267), Expect = 1.5e-23 Identity = 66/196 (33.67%), Postives = 113/196 (57.65%), Query Frame = 0
BLAST of Cp4.1LG18g00660 vs. TAIR 10
Match: AT1G54860.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 97.4 bits (241), Expect = 1.5e-20 Identity = 57/194 (29.38%), Postives = 104/194 (53.61%), Query Frame = 0
BLAST of Cp4.1LG18g00660 vs. TAIR 10
Match: AT5G19240.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 92.4 bits (228), Expect = 4.9e-19 Identity = 59/165 (35.76%), Postives = 91/165 (55.15%), Query Frame = 0
BLAST of Cp4.1LG18g00660 vs. TAIR 10
Match: AT5G19230.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 76.3 bits (186), Expect = 3.6e-14 Identity = 62/198 (31.31%), Postives = 94/198 (47.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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