Cp4.1LG17g09890 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g09890
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	S-protein homolog
Location	Cp4.1LG17: 7455303 .. 7455743 (-)
RNA-Seq Expression	Cp4.1LG17g09890
Synteny	Cp4.1LG17g09890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGATTTCAGAATGCCATTGCGTAACATGATCGTAGCGACTTTGGCCCTCGTTGCCTTCTCGACGGTGGCTATGGGATCGTGGCCAATGGAGACATGGACGGTACAAGTCGTGAATGGGCTGGGTGGCGGACAGACACTACTGGCGCATTGTAAGTCAAAAAACGATGATTTGGGTGACCAAAACATAGCCACTGGTGCGCTATATAGCTTTACTTTCAAGGACAACGTGTGGCAAACCACAGAATTCTGGTGCACATTGACCAAGCCAAACAATGCGCATGCTTCTTTCGATGTGTATTGGTATGATACTAGTAAAGATCAATGGCTTTATACCAGATGTGGCGACCATACTTGTGTTTGGATTGGCAAAGATGATGGGGTTTACATTAAAAATGCCTCTACCAATCAGGATGAGCTTGTTCATCCATGGGAATGA

mRNA sequence

ATGGGTGATTTCAGAATGCCATTGCGTAACATGATCGTAGCGACTTTGGCCCTCGTTGCCTTCTCGACGGTGGCTATGGGATCGTGGCCAATGGAGACATGGACGGTACAAGTCGTGAATGGGCTGGGTGGCGGACAGACACTACTGGCGCATTGTAAGTCAAAAAACGATGATTTGGGTGACCAAAACATAGCCACTGGTGCGCTATATAGCTTTACTTTCAAGGACAACGTGTGGCAAACCACAGAATTCTGGTGCACATTGACCAAGCCAAACAATGCGCATGCTTCTTTCGATGTGTATTGGTATGATACTAGTAAAGATCAATGGCTTTATACCAGATGTGGCGACCATACTTGTGTTTGGATTGGCAAAGATGATGGGGTTTACATTAAAAATGCCTCTACCAATCAGGATGAGCTTGTTCATCCATGGGAATGA

Coding sequence (CDS)

ATGGGTGATTTCAGAATGCCATTGCGTAACATGATCGTAGCGACTTTGGCCCTCGTTGCCTTCTCGACGGTGGCTATGGGATCGTGGCCAATGGAGACATGGACGGTACAAGTCGTGAATGGGCTGGGTGGCGGACAGACACTACTGGCGCATTGTAAGTCAAAAAACGATGATTTGGGTGACCAAAACATAGCCACTGGTGCGCTATATAGCTTTACTTTCAAGGACAACGTGTGGCAAACCACAGAATTCTGGTGCACATTGACCAAGCCAAACAATGCGCATGCTTCTTTCGATGTGTATTGGTATGATACTAGTAAAGATCAATGGCTTTATACCAGATGTGGCGACCATACTTGTGTTTGGATTGGCAAAGATGATGGGGTTTACATTAAAAATGCCTCTACCAATCAGGATGAGCTTGTTCATCCATGGGAATGA

Protein sequence

MGDFRMPLRNMIVATLALVAFSTVAMGSWPMETWTVQVVNGLGGGQTLLAHCKSKNDDLGDQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTCVWIGKDDGVYIKNASTNQDELVHPWE

Homology

[Close]

BLAST of Cp4.1LG17g09890 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.1e-22
Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = 0


Query: 34  WTVQVVNGLGGGQTLLAHCKSKNDDLGDQNIATGALYSFTFKDNVWQTTEFWCTLTKPNN 93
           W V VVNGL  G+TL  HCKSK DDLG+ N+     +S+ F +N+  +T FWC + K +N
Sbjct: 41  WQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK-DN 100

Query: 94  AHASFDVYWYDTSKDQWLYTRCGDHTCVWIGKDDGVYIKNASTNQDELVHPWE 147
            H + +V+W D      L+ RCG   C+W  K DG+Y+ N+++ +D L   WE
Sbjct: 101 GHMNVNVFWDDVI----LFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWE 148

[Close]

BLAST of Cp4.1LG17g09890 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.4e-19
Identity = 45/113 (39.82%), Postives = 67/113 (59.29%), Query Frame = 0


Query: 34  WTVQVVNGLGGGQTLLAHCKSKNDDLGDQNIATGALYSFTFKDNVWQTTEFWCTLTKPNN 93
           W V V NGL  G+TL  HCKSK +DLGD N+     +S+ F +N+  +T FWC ++K ++
Sbjct: 41  WQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK-DD 100

Query: 94  AHASFDVYWYDTSKDQWLYTRCGDHTCVWIGKDDGVYIKNASTNQDELVHPWE 147
            H +  V+W D      L+ RC    CVW  K+DG+Y+ N++  +D L   W+
Sbjct: 101 GHMNVKVFWDDVI----LFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWK 148

[Close]

BLAST of Cp4.1LG17g09890 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.7e-15
Identity = 43/117 (36.75%), Postives = 65/117 (55.56%), Query Frame = 0


Query: 29  WPMETWTVQVVNGLGGGQTLLAHCKSKNDDLGDQNIATGALYSFTFKDNVWQTTEFWCTL 88
           +P    TV++ N LG   TLL HCKSK+DDLG++ +  G  +SF+F    +  T ++C+ 
Sbjct: 43  FPTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSF 102

Query: 89  TKPNNAHASFDVYWYDTSKDQWLYTRCGDHTCVWIGKDDGVYIKNASTNQDELVHPW 146
           + PN +H SFD+  Y   +D     +C    CVW  + +G    N  T Q +L +PW
Sbjct: 103 SWPNESH-SFDI--YKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of Cp4.1LG17g09890 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 9.9e-10
Identity = 37/103 (35.92%), Postives = 52/103 (50.49%), Query Frame = 0


Query: 35  TVQVVNGLG--GGQTLLAHCKSKNDDLGDQNIATGALYSFTFKDNVWQTTEFWCTLTKPN 94
           T+ V N L       L  HCKSKN+D+G + +  G + SF+FK N W TTEFWC L K  
Sbjct: 25  TITVKNELNPKNKNILKVHCKSKNNDIGVKYLKIGEVMSFSFKTNFWGTTEFWCNLYKGP 84

Query: 95  NAHASFDVYWYDTSKDQWLYTRCGDHTCVWIGKDDGVYIKNAS 136
           +      +  Y       L+ + G  +  W+ +DDG+Y    S
Sbjct: 85  DYKRYRGITAYQAI---GLFAKDGS-SYNWLARDDGIYFHKDS 123

[Close]

BLAST of Cp4.1LG17g09890 vs. ExPASy Swiss-Prot
Match: B3H730 (S-protein homolog 18 OS=Arabidopsis thaliana OX=3702 GN=SPH18 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.9e-09
Identity = 37/117 (31.62%), Postives = 56/117 (47.86%), Query Frame = 0


Query: 12  IVATLALVAFSTVAMGSWPMETWTVQVVNGLGGGQTLLAHCKSKNDDLGDQNIATGALYS 71
           ++ ++ L+AF  V +         V ++N +G    L  HCKSK  DLG Q++A    + 
Sbjct: 8   LILSVILIAFLFVGLCEAHRHI-NVDIINDIGPNVQLGLHCKSKGKDLGPQSLAPHQHWG 67

Query: 72  FTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTCVWIGKDDG 129
           FT   NVW+TT F+C     N +       W+D  K++     C  H CVW  +  G
Sbjct: 68  FTASLNVWETTLFFCHFVWENQSR------WFDILKEKRDTIVCKYHPCVWSIRPSG 117

[Close]

BLAST of Cp4.1LG17g09890 vs. NCBI nr
Match: XP_023514776.1 (S-protein homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320 bits (821), Expect = 7.84e-111
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MGDFRMPLRNMIVATLALVAFSTVAMGSWPMETWTVQVVNGLGGGQTLLAHCKSKNDDLG 60
           MGDFRMPLRNMIVATLALVAFSTVAMGSWPMETWTVQVVNGLGGGQTLLAHCKSKNDDLG
Sbjct: 1   MGDFRMPLRNMIVATLALVAFSTVAMGSWPMETWTVQVVNGLGGGQTLLAHCKSKNDDLG 60

Query: 61  DQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTC 120
           DQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTC
Sbjct: 61  DQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTC 120

Query: 121 VWIGKDDGVYIKNASTNQDELVHPWE 146
           VWIGKDDGVYIKNASTNQDELVHPWE
Sbjct: 121 VWIGKDDGVYIKNASTNQDELVHPWE 146

[Close]

BLAST of Cp4.1LG17g09890 vs. NCBI nr
Match: KAG6592857.1 (S-protein-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 316 bits (810), Expect = 3.74e-109
Identity = 143/146 (97.95%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MGDFRMPLRNMIVATLALVAFSTVAMGSWPMETWTVQVVNGLGGGQTLLAHCKSKNDDLG 60
           MGD RMPLRNMIVATLALVAFSTVAMGSWP+ETWTVQVVNGLGGGQTLLAHCKSKNDD+G
Sbjct: 1   MGDLRMPLRNMIVATLALVAFSTVAMGSWPLETWTVQVVNGLGGGQTLLAHCKSKNDDMG 60

Query: 61  DQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTC 120
           DQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTC
Sbjct: 61  DQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTC 120

Query: 121 VWIGKDDGVYIKNASTNQDELVHPWE 146
           VWIGKDDGVYIKNASTNQDELVHPWE
Sbjct: 121 VWIGKDDGVYIKNASTNQDELVHPWE 146

[Close]

BLAST of Cp4.1LG17g09890 vs. NCBI nr
Match: XP_022959591.1 (S-protein homolog 1-like [Cucurbita moschata])

HSP 1 Score: 313 bits (802), Expect = 6.21e-108
Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 1   MGDFRMPLRNMIVATLALVAFSTVAMGSWPMETWTVQVVNGLGGGQTLLAHCKSKNDDLG 60
           MGD RM LRNMIVATLALVAFSTVAMGSWP+ETWTVQVVNGLGGGQTLLAHCKSKNDD+G
Sbjct: 1   MGDLRMSLRNMIVATLALVAFSTVAMGSWPLETWTVQVVNGLGGGQTLLAHCKSKNDDMG 60

Query: 61  DQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTC 120
           DQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTC
Sbjct: 61  DQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTC 120

Query: 121 VWIGKDDGVYIKNASTNQDELVHPWE 146
           VWIGKDDGVYIKNASTNQDELVHPWE
Sbjct: 121 VWIGKDDGVYIKNASTNQDELVHPWE 146

[Close]

BLAST of Cp4.1LG17g09890 vs. NCBI nr
Match: XP_023005093.1 (S-protein homolog 1-like [Cucurbita maxima])

HSP 1 Score: 307 bits (787), Expect = 1.21e-105
Identity = 139/146 (95.21%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 1   MGDFRMPLRNMIVATLALVAFSTVAMGSWPMETWTVQVVNGLGGGQTLLAHCKSKNDDLG 60
           MGD RM LRNMIVATLALVAFSTVAMGSWP+E WTVQVVNGLGGGQTLLAHCKSKNDDLG
Sbjct: 1   MGDLRMSLRNMIVATLALVAFSTVAMGSWPLERWTVQVVNGLGGGQTLLAHCKSKNDDLG 60

Query: 61  DQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTC 120
           D N+ATGAL+SFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTC
Sbjct: 61  DHNLATGALFSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTC 120

Query: 121 VWIGKDDGVYIKNASTNQDELVHPWE 146
           VWIGKDDGVYIKNASTNQDELVHPWE
Sbjct: 121 VWIGKDDGVYIKNASTNQDELVHPWE 146

[Close]

BLAST of Cp4.1LG17g09890 vs. NCBI nr
Match: XP_022152463.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 215 bits (547), Expect = 4.86e-69
Identity = 93/146 (63.70%), Postives = 109/146 (74.66%), Query Frame = 0


Query: 1   MGDFRMPLRNMIVATLALVAFSTVAMGSWPMETWTVQVVNGLGGGQTLLAHCKSKNDDLG 60
           MG  + PL  +IV  L L+  STVA+ +WPM TWTV +VN L  GQ L  HCKSK+DDLG
Sbjct: 1   MGGIKKPLGFVIVVALVLLGCSTVALATWPMPTWTVDIVNELSNGQELFVHCKSKDDDLG 60

Query: 61  DQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTC 120
           + N+ +GA Y FTFKDNVWQTT FWC L KP+N+HA+FDVYWYD SK  WLYTRC    C
Sbjct: 61  EHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNC 120

Query: 121 VWIGKDDGVYIKNASTNQDELVHPWE 146
           +WI K DG+YIKN  +NQDELVHPWE
Sbjct: 121 IWIAKADGIYIKNIPSNQDELVHPWE 146

[Close]

BLAST of Cp4.1LG17g09890 vs. ExPASy TrEMBL
Match: A0A6J1H5A3 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111460620 PE=3 SV=1)

HSP 1 Score: 313 bits (802), Expect = 3.00e-108
Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 1   MGDFRMPLRNMIVATLALVAFSTVAMGSWPMETWTVQVVNGLGGGQTLLAHCKSKNDDLG 60
           MGD RM LRNMIVATLALVAFSTVAMGSWP+ETWTVQVVNGLGGGQTLLAHCKSKNDD+G
Sbjct: 1   MGDLRMSLRNMIVATLALVAFSTVAMGSWPLETWTVQVVNGLGGGQTLLAHCKSKNDDMG 60

Query: 61  DQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTC 120
           DQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTC
Sbjct: 61  DQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTC 120

Query: 121 VWIGKDDGVYIKNASTNQDELVHPWE 146
           VWIGKDDGVYIKNASTNQDELVHPWE
Sbjct: 121 VWIGKDDGVYIKNASTNQDELVHPWE 146

[Close]

BLAST of Cp4.1LG17g09890 vs. ExPASy TrEMBL
Match: A0A6J1L199 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111498184 PE=3 SV=1)

HSP 1 Score: 307 bits (787), Expect = 5.84e-106
Identity = 139/146 (95.21%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 1   MGDFRMPLRNMIVATLALVAFSTVAMGSWPMETWTVQVVNGLGGGQTLLAHCKSKNDDLG 60
           MGD RM LRNMIVATLALVAFSTVAMGSWP+E WTVQVVNGLGGGQTLLAHCKSKNDDLG
Sbjct: 1   MGDLRMSLRNMIVATLALVAFSTVAMGSWPLERWTVQVVNGLGGGQTLLAHCKSKNDDLG 60

Query: 61  DQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTC 120
           D N+ATGAL+SFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTC
Sbjct: 61  DHNLATGALFSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTC 120

Query: 121 VWIGKDDGVYIKNASTNQDELVHPWE 146
           VWIGKDDGVYIKNASTNQDELVHPWE
Sbjct: 121 VWIGKDDGVYIKNASTNQDELVHPWE 146

[Close]

BLAST of Cp4.1LG17g09890 vs. ExPASy TrEMBL
Match: A0A6J1DEX4 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111020182 PE=3 SV=1)

HSP 1 Score: 215 bits (547), Expect = 2.35e-69
Identity = 93/146 (63.70%), Postives = 109/146 (74.66%), Query Frame = 0


Query: 1   MGDFRMPLRNMIVATLALVAFSTVAMGSWPMETWTVQVVNGLGGGQTLLAHCKSKNDDLG 60
           MG  + PL  +IV  L L+  STVA+ +WPM TWTV +VN L  GQ L  HCKSK+DDLG
Sbjct: 1   MGGIKKPLGFVIVVALVLLGCSTVALATWPMPTWTVDIVNELSNGQELFVHCKSKDDDLG 60

Query: 61  DQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTC 120
           + N+ +GA Y FTFKDNVWQTT FWC L KP+N+HA+FDVYWYD SK  WLYTRC    C
Sbjct: 61  EHNLDSGAQYGFTFKDNVWQTTLFWCYLRKPDNSHAAFDVYWYDISKGHWLYTRCDYKNC 120

Query: 121 VWIGKDDGVYIKNASTNQDELVHPWE 146
           +WI K DG+YIKN  +NQDELVHPWE
Sbjct: 121 IWIAKADGIYIKNIPSNQDELVHPWE 146

[Close]

BLAST of Cp4.1LG17g09890 vs. ExPASy TrEMBL
Match: A0A6J1CQ33 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013534 PE=3 SV=1)

HSP 1 Score: 192 bits (487), Expect = 3.22e-60
Identity = 85/147 (57.82%), Postives = 101/147 (68.71%), Query Frame = 0


Query: 1   MGDFRMPLRNMIVATLALVAFSTVAMGSWPM-ETWTVQVVNGLGGGQTLLAHCKSKNDDL 60
           MG  + PL  MIV  L L+  ST+A  +WP   TW V +VN L   QTL  HC+SK+DDL
Sbjct: 1   MGCLKEPLGFMIVVALVLLHCSTLASSAWPSWPTWHVNIVNELNSEQTLFVHCQSKDDDL 60

Query: 61  GDQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHT 120
           G+ NI+ G  YSF FKDN+W TT FWC L KPNN+HA FDVYW D  K  WLYTRC   T
Sbjct: 61  GEHNISVGTQYSFAFKDNIWGTTLFWCYLRKPNNSHADFDVYWVDNGKGYWLYTRCNWKT 120

Query: 121 CVWIGKDDGVYIKNASTNQDELVHPWE 146
           C+WI KDDG+YIK+   NQD+L+H WE
Sbjct: 121 CIWIAKDDGIYIKDIPVNQDQLIHKWE 147

[Close]

BLAST of Cp4.1LG17g09890 vs. ExPASy TrEMBL
Match: A0A6J1CQW3 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013499 PE=3 SV=1)

HSP 1 Score: 168 bits (426), Expect = 5.41e-51
Identity = 75/140 (53.57%), Postives = 96/140 (68.57%), Query Frame = 0


Query: 7   PLRNMIVATLALVAFSTV-AMGSWPMETWTVQVVNGLGGGQTLLAHCKSKNDDLGDQNIA 66
           P + +I+  + LV  ST  A  +WP + W V +VNGL  GQTL  HCKSK+DDLG  N+A
Sbjct: 4   PKKLLILVAMVLVCSSTTTAHSTWPNK-WRVDIVNGLSSGQTLFIHCKSKDDDLGIHNLA 63

Query: 67  TGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTCVWIGK 126
            GA + + F+DN+W TT FWC + KP+NA+ASF+VYW D SK+QWLY  C    C+W  K
Sbjct: 64  VGAKFGWNFRDNLWGTTLFWCYMRKPDNANASFEVYWDDKSKEQWLYNFCNWEDCIWTAK 123

Query: 127 DDGVYIKNASTNQDELVHPW 145
           DDG+YIKN   N+DEL H W
Sbjct: 124 DDGIYIKNILGNKDELAHKW 142

[Close]

BLAST of Cp4.1LG17g09890 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 105.5 bits (262), Expect = 3.6e-23
Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = 0


Query: 34  WTVQVVNGLGGGQTLLAHCKSKNDDLGDQNIATGALYSFTFKDNVWQTTEFWCTLTKPNN 93
           W V VVNGL  G+TL  HCKSK DDLG+ N+     +S+ F +N+  +T FWC + K +N
Sbjct: 41  WQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK-DN 100

Query: 94  AHASFDVYWYDTSKDQWLYTRCGDHTCVWIGKDDGVYIKNASTNQDELVHPWE 147
            H + +V+W D      L+ RCG   C+W  K DG+Y+ N+++ +D L   WE
Sbjct: 101 GHMNVNVFWDDVI----LFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWE 148

[Close]

BLAST of Cp4.1LG17g09890 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 96.7 bits (239), Expect = 1.7e-20
Identity = 45/113 (39.82%), Postives = 67/113 (59.29%), Query Frame = 0


Query: 34  WTVQVVNGLGGGQTLLAHCKSKNDDLGDQNIATGALYSFTFKDNVWQTTEFWCTLTKPNN 93
           W V V NGL  G+TL  HCKSK +DLGD N+     +S+ F +N+  +T FWC ++K ++
Sbjct: 41  WQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK-DD 100

Query: 94  AHASFDVYWYDTSKDQWLYTRCGDHTCVWIGKDDGVYIKNASTNQDELVHPWE 147
            H +  V+W D      L+ RC    CVW  K+DG+Y+ N++  +D L   W+
Sbjct: 101 GHMNVKVFWDDVI----LFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWK 148

[Close]

BLAST of Cp4.1LG17g09890 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 83.2 bits (204), Expect = 1.9e-16
Identity = 43/117 (36.75%), Postives = 65/117 (55.56%), Query Frame = 0


Query: 29  WPMETWTVQVVNGLGGGQTLLAHCKSKNDDLGDQNIATGALYSFTFKDNVWQTTEFWCTL 88
           +P    TV++ N LG   TLL HCKSK+DDLG++ +  G  +SF+F    +  T ++C+ 
Sbjct: 43  FPTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSF 102

Query: 89  TKPNNAHASFDVYWYDTSKDQWLYTRCGDHTCVWIGKDDGVYIKNASTNQDELVHPW 146
           + PN +H SFD+  Y   +D     +C    CVW  + +G    N  T Q +L +PW
Sbjct: 103 SWPNESH-SFDI--YKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of Cp4.1LG17g09890 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 77.8 bits (190), Expect = 8.1e-15
Identity = 37/95 (38.95%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 36  VQVVNGLGGGQTLLAHCKSKNDDLGDQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAH 95
           V + N L   + L  HC+SK+DDLG+  +  G  Y FTF DN+WQTT F C + +  N  
Sbjct: 29  VVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFK 88

Query: 96  ASFDVYWYDTSKDQWLYTRCGDHTCVWIGKDDGVY 131
              D   Y+TS     +++  + +C WIG++DG+Y
Sbjct: 89  HHLDFVAYETS-----WSKALEASCKWIGREDGIY 118

[Close]

BLAST of Cp4.1LG17g09890 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 74.3 bits (181), Expect = 8.9e-14
Identity = 40/111 (36.04%), Postives = 57/111 (51.35%), Query Frame = 0


Query: 35  TVQVVNGLGGGQTLLAHCKSKNDDLGDQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNA 94
           TV + N LGG   L  HCKSKNDDLGD+N+A    +SF F+ +V+  T F+C        
Sbjct: 29  TVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGFIWDKEL 88

Query: 95  HASFDVYWYDTSKDQWLYTRCGDHTCVWIGKDDGVYIKNASTNQDELVHPW 146
           H  FD+Y     ++   +   G   C W  + DG    N ++N  ++  PW
Sbjct: 89  H-WFDIYKQSRDRE---FAEFGCRRCEWKIRKDGPCKLNKNSNMFDVCLPW 135

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g09890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	5.1e-22	42.48	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	2.4e-19	39.82	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
F4JLQ5	2.7e-15	36.75	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
Q9LW22	9.9e-10	35.92	S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1	[more]
B3H730	2.9e-09	31.62	S-protein homolog 18 OS=Arabidopsis thaliana OX=3702 GN=SPH18 PE=3 SV=1	[more]

BLAST of Cp4.1LG17g09890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023514776.1	7.84e-111	100.00	S-protein homolog 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6592857.1	3.74e-109	97.95	S-protein-like 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022959591.1	6.21e-108	97.26	S-protein homolog 1-like [Cucurbita moschata]	[more]
XP_023005093.1	1.21e-105	95.21	S-protein homolog 1-like [Cucurbita maxima]	[more]
XP_022152463.1	4.86e-69	63.70	S-protein homolog 1-like [Momordica charantia]	[more]

BLAST of Cp4.1LG17g09890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H5A3	3.00e-108	97.26	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111460620 PE=3 SV=1	[more]
A0A6J1L199	5.84e-106	95.21	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111498184 PE=3 SV=1	[more]
A0A6J1DEX4	2.35e-69	63.70	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111020182 PE=3 SV=1	[more]
A0A6J1CQ33	3.22e-60	57.82	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013534 PE=3 SV=1	[more]
A0A6J1CQW3	5.41e-51	53.57	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013499 PE=3 SV=1	[more]

BLAST of Cp4.1LG17g09890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	3.6e-23	42.48	S-protein homologue 1	[more]
AT4G29035.1	1.7e-20	39.82	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	1.9e-16	36.75	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	8.1e-15	38.95	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	8.9e-14	36.04	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 35..145 e-value: 4.3E-27 score: 94.7
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 24..131
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 24..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g09890.1	Cp4.1LG17g09890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region