Cp4.1LG17g09890 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGATTTCAGAATGCCATTGCGTAACATGATCGTAGCGACTTTGGCCCTCGTTGCCTTCTCGACGGTGGCTATGGGATCGTGGCCAATGGAGACATGGACGGTACAAGTCGTGAATGGGCTGGGTGGCGGACAGACACTACTGGCGCATTGTAAGTCAAAAAACGATGATTTGGGTGACCAAAACATAGCCACTGGTGCGCTATATAGCTTTACTTTCAAGGACAACGTGTGGCAAACCACAGAATTCTGGTGCACATTGACCAAGCCAAACAATGCGCATGCTTCTTTCGATGTGTATTGGTATGATACTAGTAAAGATCAATGGCTTTATACCAGATGTGGCGACCATACTTGTGTTTGGATTGGCAAAGATGATGGGGTTTACATTAAAAATGCCTCTACCAATCAGGATGAGCTTGTTCATCCATGGGAATGA ATGGGTGATTTCAGAATGCCATTGCGTAACATGATCGTAGCGACTTTGGCCCTCGTTGCCTTCTCGACGGTGGCTATGGGATCGTGGCCAATGGAGACATGGACGGTACAAGTCGTGAATGGGCTGGGTGGCGGACAGACACTACTGGCGCATTGTAAGTCAAAAAACGATGATTTGGGTGACCAAAACATAGCCACTGGTGCGCTATATAGCTTTACTTTCAAGGACAACGTGTGGCAAACCACAGAATTCTGGTGCACATTGACCAAGCCAAACAATGCGCATGCTTCTTTCGATGTGTATTGGTATGATACTAGTAAAGATCAATGGCTTTATACCAGATGTGGCGACCATACTTGTGTTTGGATTGGCAAAGATGATGGGGTTTACATTAAAAATGCCTCTACCAATCAGGATGAGCTTGTTCATCCATGGGAATGA ATGGGTGATTTCAGAATGCCATTGCGTAACATGATCGTAGCGACTTTGGCCCTCGTTGCCTTCTCGACGGTGGCTATGGGATCGTGGCCAATGGAGACATGGACGGTACAAGTCGTGAATGGGCTGGGTGGCGGACAGACACTACTGGCGCATTGTAAGTCAAAAAACGATGATTTGGGTGACCAAAACATAGCCACTGGTGCGCTATATAGCTTTACTTTCAAGGACAACGTGTGGCAAACCACAGAATTCTGGTGCACATTGACCAAGCCAAACAATGCGCATGCTTCTTTCGATGTGTATTGGTATGATACTAGTAAAGATCAATGGCTTTATACCAGATGTGGCGACCATACTTGTGTTTGGATTGGCAAAGATGATGGGGTTTACATTAAAAATGCCTCTACCAATCAGGATGAGCTTGTTCATCCATGGGAATGA MGDFRMPLRNMIVATLALVAFSTVAMGSWPMETWTVQVVNGLGGGQTLLAHCKSKNDDLGDQNIATGALYSFTFKDNVWQTTEFWCTLTKPNNAHASFDVYWYDTSKDQWLYTRCGDHTCVWIGKDDGVYIKNASTNQDELVHPWE Homology
BLAST of Cp4.1LG17g09890 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 5.1e-22 Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = 0
BLAST of Cp4.1LG17g09890 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 2.4e-19 Identity = 45/113 (39.82%), Postives = 67/113 (59.29%), Query Frame = 0
BLAST of Cp4.1LG17g09890 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.7e-15 Identity = 43/117 (36.75%), Postives = 65/117 (55.56%), Query Frame = 0
BLAST of Cp4.1LG17g09890 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 9.9e-10 Identity = 37/103 (35.92%), Postives = 52/103 (50.49%), Query Frame = 0
BLAST of Cp4.1LG17g09890 vs. ExPASy Swiss-Prot
Match: B3H730 (S-protein homolog 18 OS=Arabidopsis thaliana OX=3702 GN=SPH18 PE=3 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.9e-09 Identity = 37/117 (31.62%), Postives = 56/117 (47.86%), Query Frame = 0
BLAST of Cp4.1LG17g09890 vs. NCBI nr
Match: XP_023514776.1 (S-protein homolog 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 320 bits (821), Expect = 7.84e-111 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of Cp4.1LG17g09890 vs. NCBI nr
Match: KAG6592857.1 (S-protein-like 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 316 bits (810), Expect = 3.74e-109 Identity = 143/146 (97.95%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of Cp4.1LG17g09890 vs. NCBI nr
Match: XP_022959591.1 (S-protein homolog 1-like [Cucurbita moschata]) HSP 1 Score: 313 bits (802), Expect = 6.21e-108 Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of Cp4.1LG17g09890 vs. NCBI nr
Match: XP_023005093.1 (S-protein homolog 1-like [Cucurbita maxima]) HSP 1 Score: 307 bits (787), Expect = 1.21e-105 Identity = 139/146 (95.21%), Postives = 142/146 (97.26%), Query Frame = 0
BLAST of Cp4.1LG17g09890 vs. NCBI nr
Match: XP_022152463.1 (S-protein homolog 1-like [Momordica charantia]) HSP 1 Score: 215 bits (547), Expect = 4.86e-69 Identity = 93/146 (63.70%), Postives = 109/146 (74.66%), Query Frame = 0
BLAST of Cp4.1LG17g09890 vs. ExPASy TrEMBL
Match: A0A6J1H5A3 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111460620 PE=3 SV=1) HSP 1 Score: 313 bits (802), Expect = 3.00e-108 Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of Cp4.1LG17g09890 vs. ExPASy TrEMBL
Match: A0A6J1L199 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111498184 PE=3 SV=1) HSP 1 Score: 307 bits (787), Expect = 5.84e-106 Identity = 139/146 (95.21%), Postives = 142/146 (97.26%), Query Frame = 0
BLAST of Cp4.1LG17g09890 vs. ExPASy TrEMBL
Match: A0A6J1DEX4 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111020182 PE=3 SV=1) HSP 1 Score: 215 bits (547), Expect = 2.35e-69 Identity = 93/146 (63.70%), Postives = 109/146 (74.66%), Query Frame = 0
BLAST of Cp4.1LG17g09890 vs. ExPASy TrEMBL
Match: A0A6J1CQ33 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013534 PE=3 SV=1) HSP 1 Score: 192 bits (487), Expect = 3.22e-60 Identity = 85/147 (57.82%), Postives = 101/147 (68.71%), Query Frame = 0
BLAST of Cp4.1LG17g09890 vs. ExPASy TrEMBL
Match: A0A6J1CQW3 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013499 PE=3 SV=1) HSP 1 Score: 168 bits (426), Expect = 5.41e-51 Identity = 75/140 (53.57%), Postives = 96/140 (68.57%), Query Frame = 0
BLAST of Cp4.1LG17g09890 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 105.5 bits (262), Expect = 3.6e-23 Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = 0
BLAST of Cp4.1LG17g09890 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 96.7 bits (239), Expect = 1.7e-20 Identity = 45/113 (39.82%), Postives = 67/113 (59.29%), Query Frame = 0
BLAST of Cp4.1LG17g09890 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 83.2 bits (204), Expect = 1.9e-16 Identity = 43/117 (36.75%), Postives = 65/117 (55.56%), Query Frame = 0
BLAST of Cp4.1LG17g09890 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 77.8 bits (190), Expect = 8.1e-15 Identity = 37/95 (38.95%), Postives = 55/95 (57.89%), Query Frame = 0
BLAST of Cp4.1LG17g09890 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 74.3 bits (181), Expect = 8.9e-14 Identity = 40/111 (36.04%), Postives = 57/111 (51.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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