Cp4.1LG17g09190 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGAGGGCAGGTAAACAGGTCCAGCTTTCCGAGAACGAGGGCAGGCAAACAGGTCCAGCTTTTCGAGAACGAGATCAAGCTTCTTTGTGTTTCTTCCAGAGAGATTTTGTCCAACAACCCAATTTGCTTGAGCTTGAAGCACCTATCAAGATTTGTGGTTGTTGTGCGCCGAAAGCGGAACAAATGTACTCACAACACCAAAGTTACTCAAGACATACAATATGACACTCAAAACTTGATGATTTCAACAGCAGAAAGAATGGCATTATATAGCCTTCTGCTAAACCTAAACATAAACTAACAAGCCAAAAAAAGACCTTGAGAATAGGTCTTGGTCCTAGAGAATAGGGCTTATGACAGTGTTCAACAATCTCCACCTTGTCATAAGATCTCCAAGTTGATAGCTAATTTGGTTGCTACCATGTCAACACACTACTCCCTTCCGACGTTGATGAAATCTAAACAATGCCAGAACTTTTCACGAGTGATAACCTTTGTCAACATATCAGCAGGGTTATCAGCAGTTCCAATTTTTAATAACCGAATATCCCCTTTGCTAATAATTTCTCGAATAAAGTGAAAACGGACATCAATGTGTTTTGTACGAGCATGATGGACTTGATTTTTTGACAAGCAAATAGCGCTCTGGCTATCACAAAATACATCTATATGTTCCTGCAAAATACCCAAGTCATTGATCAAACCATGCATCCAAATAGCTTCTTTAAAAGCTTCTGTTACTGCCATATACTCTGCTTCAGTGGTAGACAATGCAACAGTAGACTGCAATGTTGAACGCCAACAAACAGGTCCACCAGCCATAGTAAATAAATAACCCGTAGTAGATCGTCGCTTATCCAAATCACCAGCATAATCAGAATCCACATAACCAGCTACACGATTGTCAAGATTAAACATTTCTTGTTTTTGAAACTTAATACCAACATCAATAGTGCCAAGAATGTACCTAAGAATCCATTTTACAGCCTTCCAATGCTCTTTACCAGGATTATGCATATAACGACTCACCATGCTTACTGCGTGTGAAAGATCAGGTCGAGTACACACCATAGCATACATCAACGCACCAACAGCATTTGTATAAGGAATGTTCTCCATATACCTTTTGTCATCATCAGAACTTGGACACATGGAAGCACTAAGCTTGAAATGAGGAGCAAGTGGAGTACTAACGGGTTTGGTTGAATTATTCAAACTAAATCTTGACAATACCTTGCGTAGATATTGAGACTGAGTCAACCAGACTGTACCTTTTTTCCGATCTCGCTCTATCTCCATTCCAAGTATTTTCTTTGCATTGCCTAAGTCTTTCATTTCAAATGTTTTAGAAAGCTCATCTTTGAGCTTATCAATCTCCATCTGTCTCTTTGAAGCAATTAACATATCATCAACATATAAGAGCAAATAGATAAACGATCCATCATCGAGACACCGATAATACACACAATGGTCAAATTGACTATGAGTATACATATGCTCTACCATGAAATGATCAAACCTTTTATACCATTGGCGAGGGGATTGCTTCAGCCCATACAAAGATTTCTTCCATCTGCATACTAAATGTTGCTGTCCAACTACTTGGAAACCAACTGGTTGCGCCATATATATTTCTTCTTCCAAATCTCCATGCAAAAAAGCAGTTTTTACATCAAGTTGTGCAAGCTCAAGATTAAATTGAGCAACCAAAGCCAACAAAATTCGAATGGAAGAATGTTTTACCACACGTGAGAAAATTTCATTGTAATTAATACCTTCCTTTTGTGCGTAACCTTTAGCCACAAGTCGAGCCTTATAACGTATACCAGAAGAGTCTTCCTTTTTTGCAAAAACCCATTTACAACCAATTTCCTTCTTACCTTTTGGAAGTGGTACCAAATCCCAAGTTTGATTTATCTCCAATGATGCTATCTCCTGATTCACAGCCTCTTGCCAGTGTAAGCTATCCGGGCTCTGAATAGCATCTTTGTAGCTGTTAGGAACTCCATCAATCAAAGAGAAAGCATATGCTATCGTATCATCAAACCTTGCAGGTTTTCGAATTACCCTTCGTGGTCTATTCTTGGTGATTGACTCAGGTTCCTCCATTCTTTCATTCACAAGGCTTTGCTCCTCAAGACTTTGCTCTTTTTGTTCTAAGACATCAAAGTTATTATTTACCTGATCAATAGGTTCTTCGGTAGGAGCAACCACATCAGGAGAGAACACCACCTTCTCCACCTGCTTCAATGCCTCGTCATTATTTTCAATTTTCTGCAAAAACATTCCAGACTCATCGAATGTCACATCTCGACTATTAACAATTTTACTTGTTTCTGGACACCATAACCTATAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCATTCTTCTTTTTATCTTGTTTTTAATTTGTTTTAATTTTAATTTTTTTTTATCTTCTTTTCATTCTTTCTTTTATTCTTATTTTGAAATTCTTTTAATATCTTCTTTTCATATTTTTTTTCATTTTCTTTTCATTCTCTGTCGCCATTCTTCTTTTTCGAGGGCAGGTAAACAGGTCCAGCTTTCCGAGAACGAGATCAAGCTTCATTGTGTTTCTTCCAGAGAGATTTTGTCCAACAACTCAATTTGCTTGAGCTTGAAGCAGCTATCAAGATTTGTGGTGACATTCATGGTCAGTTTACTCATTTGTTAAGACTTTTTGAATATTGGTTTCTACCTCATGAAAATTATTTCTCTTTTTCAATCTTATCCCCTATTCTTTTTTTCATCTTTTTTTCATTTTCATTTTCCTTCTTTTCATTTCAATTTCATTTTTTTTTCATTCTTCTTTTTATTTTCTTTTCATTCTTCTTTTCATCCTTTTTTAATTTGTTTTCATTTTCTTTTTATTTTCATTTTATTTTCATTTTATTCTTATATCTAAATTGTTTTAATATCTACTTTTTAATCTTTTTTTTATTCTTGTTTTCATATTTTTTTATTTTCTTTTCATTCTCTGTCCCCCATTCTTCTTTTCATTTCATGTCTGCGAGGGCAGGTAAACAGGTCCAGCTTTACGAGAACGAGATCAAGCTTTTTTTGCTTCTTCCAGAGAGATTTTGTCCAGCAACCCAATTTGCTTGATCTTGAAGCACCTATCAAGATTTGTGGTGACATTCATGGACAGTTCACTGATTTATTAAGACTTTTTTAATATATGGTTTCCACTTAATGAAAATTATTTTCTCTTTTTCATTTTTTATCGGCCTATTCTTTTTTTCAATCTTTTTTTCATTTTAATTTATCTTTTTTTTCATTCTTCTTTTAATTTTTTTTTCATTCTTCTTTTTATCTTGTTTTTAATTTTTTTTCATTTTCTTTTTATTTTCATTTTTTTTAATCTTTTTTTCATTATTCCTTTTATTCTTATTCTGAAATTCTTTTTATATCTACCTTTTCATATTTTTTTTATTTTATTTTCATTCTCTATCCTCATTTTTCTCTTTCGAGGGCAGGTAAACAGGTCCAGCTTTCCGAGAACGAGATCAAGCTTTTTTGTGTTTCTTCCAGAGAGATTTCGTCCAACAACCCAATTTGCTTGAGCTTGAAGCACCTATCAAGATTTGTGGTGACATTAATGGGCAGTTCACTCATTTGTTAAGACTTTTTGAATATGGGTTTCTATCTAATGAAAATTATTTCTCTTTTTCATTTTTATCAGCTTATTCTTTGTTTCATTTTCTTTTTTTTCATTTAAATTTCATCTTTTTTTCATTCTTGTTTTTATTTTCTTTTCATTCTTCTTTTCATCTCGTTTTTAATTTGTTTTCATTTTCTTTTTATTTTTATTTTATTATTATCTTTTTTTCATTCTTCTGTTTATTCTTATTTTGAAATTCTTTTAATATCTTCTTTTCAATTTTTTTTTTCATTCTTCTTTCTCATACTTTCTTATTTTCTTTTCATTCTCTGTCCCCCATTCTTTTTTTCATTTCATGTCCGCAAGGGCAGGTAAACAGGTGCACAGCTTTCCGAGAACGAGATCAAGCTTCTTTGTGCTTCTTCTAGAGAGATTTTGTCCAGCAACACAATTTGCTTGAGCTTGAAGCACCTATCAAGATTTGTGGTGACATTCATGGGCAGTTTACTGATTTGTTAATACTTTTTTAATATATGGGTTTCCACTTAATTAAAATTATTTCCTCTCTTTCATTCTTTATAGGCCTATTCTTTTTTTCATCTTCTTTTCATTTTCCTTGTTTTCATTTTAATTTCATCTTTTTTCCATTCTTCTTTTAATTTACTTTTCATTCTTCTTTTTATCTTGTTTTTAATTTGTTTTAATTTTCATTTTTTTTTATTTCTTTTCCTTCTTTCTTTTATTCTTATTTTGAAATTCTTTTAATATCTTATTTTCATATTTTTTTTTTATTTTGTTTTTATTTTGTTTTCATTCTCTGTCGCCATTCTTCTTTTTCGAGGGCAGGTAAACAGGTCCAACTTTCCGAGAACGAGATCAAGTTTCATTGTGTTTCTTCCAGAGAGATTTTGTCCAACAACTCAATTTGCTTGAGCTTGAAGCACCTATCAAGATTTGTGGTGACATGAATGGGTAG ATGTCGAGGGCAGGTAAACAGGTCCAGCTTTCCGAGAACGAGATCAAGCTTCATTGTGTTTCTTCCAGAGAGATTTTGTCCAACAACTCAATTTGCTTGAGCTTGAAGCAGCTATCAAGATTTGTGGTGACATTCATGAGAGATTTTGTCCAACAACTCAATTTGCTTGAGCTTGAAGCACCTATCAAGATTTGTGGTGACATGAATGGGTAG ATGTCGAGGGCAGGTAAACAGGTCCAGCTTTCCGAGAACGAGATCAAGCTTCATTGTGTTTCTTCCAGAGAGATTTTGTCCAACAACTCAATTTGCTTGAGCTTGAAGCAGCTATCAAGATTTGTGGTGACATTCATGAGAGATTTTGTCCAACAACTCAATTTGCTTGAGCTTGAAGCACCTATCAAGATTTGTGGTGACATGAATGGGTAG MSRAGKQVQLSENEIKLHCVSSREILSNNSICLSLKQLSRFVVTFMRDFVQQLNLLELEAPIKICGDMNG Homology
BLAST of Cp4.1LG17g09190 vs. ExPASy Swiss-Prot
Match: P48480 (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Acetabularia peniculus OX=35862 PE=3 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 5.8e-08 Identity = 33/69 (47.83%), Postives = 43/69 (62.32%), Query Frame = 0
BLAST of Cp4.1LG17g09190 vs. ExPASy Swiss-Prot
Match: P48484 (Serine/threonine-protein phosphatase PP1 isozyme 4 OS=Arabidopsis thaliana OX=3702 GN=TOPP4 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.3e-07 Identity = 33/70 (47.14%), Postives = 41/70 (58.57%), Query Frame = 0
BLAST of Cp4.1LG17g09190 vs. ExPASy Swiss-Prot
Match: P48489 (Serine/threonine-protein phosphatase PP1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0268000 PE=2 SV=2) HSP 1 Score: 55.1 bits (131), Expect = 3.8e-07 Identity = 33/69 (47.83%), Postives = 39/69 (56.52%), Query Frame = 0
BLAST of Cp4.1LG17g09190 vs. ExPASy Swiss-Prot
Match: P30366 (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Arabidopsis thaliana OX=3702 GN=TOPP1 PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 3.2e-06 Identity = 31/67 (46.27%), Postives = 37/67 (55.22%), Query Frame = 0
BLAST of Cp4.1LG17g09190 vs. ExPASy Swiss-Prot
Match: P22198 (Serine/threonine-protein phosphatase PP1 OS=Zea mays OX=4577 GN=PP1 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 3.2e-06 Identity = 30/68 (44.12%), Postives = 38/68 (55.88%), Query Frame = 0
BLAST of Cp4.1LG17g09190 vs. NCBI nr
Match: KAG6578428.1 (Serine/threonine-protein phosphatase PP1 isozyme 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 65.9 bits (159), Expect = 2.03e-11 Identity = 38/69 (55.07%), Postives = 42/69 (60.87%), Query Frame = 0
BLAST of Cp4.1LG17g09190 vs. NCBI nr
Match: KAG6600976.1 (Serine/threonine-protein phosphatase PP1 isozyme 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 67.8 bits (164), Expect = 2.90e-11 Identity = 39/70 (55.71%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of Cp4.1LG17g09190 vs. NCBI nr
Match: XP_022956565.1 (serine/threonine-protein phosphatase PP1 isozyme 4-like [Cucurbita moschata] >XP_022956566.1 serine/threonine-protein phosphatase PP1 isozyme 4-like [Cucurbita moschata] >XP_022976799.1 serine/threonine-protein phosphatase PP1 isozyme 4-like [Cucurbita maxima] >XP_022976810.1 serine/threonine-protein phosphatase PP1 isozyme 4-like [Cucurbita maxima] >XP_023547178.1 serine/threonine-protein phosphatase PP1 isozyme 4-like [Cucurbita pepo subsp. pepo] >XP_023547185.1 serine/threonine-protein phosphatase PP1 isozyme 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 67.8 bits (164), Expect = 2.98e-11 Identity = 39/70 (55.71%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of Cp4.1LG17g09190 vs. NCBI nr
Match: XP_008461712.1 (PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4 [Cucumis melo] >XP_016902748.1 PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4 [Cucumis melo]) HSP 1 Score: 67.8 bits (164), Expect = 2.98e-11 Identity = 39/70 (55.71%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of Cp4.1LG17g09190 vs. NCBI nr
Match: XP_004150636.1 (serine/threonine-protein phosphatase PP1 isozyme 4 [Cucumis sativus] >KGN50582.1 hypothetical protein Csa_021459 [Cucumis sativus]) HSP 1 Score: 67.8 bits (164), Expect = 2.98e-11 Identity = 39/70 (55.71%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of Cp4.1LG17g09190 vs. ExPASy TrEMBL
Match: A0A6J1K185 (Serine/threonine-protein phosphatase OS=Cucurbita maxima OX=3661 GN=LOC111491490 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.44e-11 Identity = 39/70 (55.71%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of Cp4.1LG17g09190 vs. ExPASy TrEMBL
Match: A0A6J1IPN9 (Serine/threonine-protein phosphatase OS=Cucurbita maxima OX=3661 GN=LOC111477070 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.44e-11 Identity = 39/70 (55.71%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of Cp4.1LG17g09190 vs. ExPASy TrEMBL
Match: A0A1S4E3E8 (Serine/threonine-protein phosphatase OS=Cucumis melo OX=3656 GN=LOC103500246 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.44e-11 Identity = 39/70 (55.71%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of Cp4.1LG17g09190 vs. ExPASy TrEMBL
Match: A0A6J1GY47 (Serine/threonine-protein phosphatase OS=Cucurbita moschata OX=3662 GN=LOC111458264 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.44e-11 Identity = 39/70 (55.71%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of Cp4.1LG17g09190 vs. ExPASy TrEMBL
Match: A0A0A0KQB9 (Serine/threonine-protein phosphatase OS=Cucumis sativus OX=3659 GN=Csa_5G184820 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.44e-11 Identity = 39/70 (55.71%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of Cp4.1LG17g09190 vs. TAIR 10
Match: AT2G39840.1 (type one serine/threonine protein phosphatase 4 ) HSP 1 Score: 56.6 bits (135), Expect = 9.2e-09 Identity = 33/70 (47.14%), Postives = 41/70 (58.57%), Query Frame = 0
BLAST of Cp4.1LG17g09190 vs. TAIR 10
Match: AT2G29400.1 (type one protein phosphatase 1 ) HSP 1 Score: 52.0 bits (123), Expect = 2.3e-07 Identity = 31/67 (46.27%), Postives = 37/67 (55.22%), Query Frame = 0
BLAST of Cp4.1LG17g09190 vs. TAIR 10
Match: AT3G05580.1 (Calcineurin-like metallo-phosphoesterase superfamily protein ) HSP 1 Score: 49.7 bits (117), Expect = 1.1e-06 Identity = 29/68 (42.65%), Postives = 38/68 (55.88%), Query Frame = 0
BLAST of Cp4.1LG17g09190 vs. TAIR 10
Match: AT5G43380.1 (type one serine/threonine protein phosphatase 6 ) HSP 1 Score: 49.7 bits (117), Expect = 1.1e-06 Identity = 30/68 (44.12%), Postives = 37/68 (54.41%), Query Frame = 0
BLAST of Cp4.1LG17g09190 vs. TAIR 10
Match: AT5G43380.2 (type one serine/threonine protein phosphatase 6 ) HSP 1 Score: 49.7 bits (117), Expect = 1.1e-06 Identity = 30/68 (44.12%), Postives = 37/68 (54.41%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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