Cp4.1LG17g02190 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g02190
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	DEAD-box ATP-dependent RNA helicase 13
Location	Cp4.1LG17: 1422709 .. 1431805 (-)
RNA-Seq Expression	Cp4.1LG17g02190
Synteny	Cp4.1LG17g02190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAAATAGTTTTGTACTCTTTCCTAAATGGCAGCAACTTCCTCCGCAGAGATTGCAGTTGTAATCTCTTTTCTTTCCCAGGAAACAAGCATTAGCAGGAGCAATTTGTTTTGCAGCCAAACTTGGGCGGTAGGCTGTATTCGAGAGTTCATAAATGGCTGAGGACCCAATGCAGTCGATATCTTCTCAAAAGAGAAGGCCAAAGAGGAAGAGAATCCAGAAAGACCCAGAATTGGACCGTCTCGATTCACTCTCATGGAAGTCATCAATCCCGAGGGACGACGCCTTGTCTGCTTTCATTGGATCCAACGATCTCGAAGGAGGTTTGAATTAATTTGTATGCTCTGCTTTAGAAGCTTATATTACACGCGTGGTCATACTAAATTAATTCTGTTGGGTTTGTGGCCTTTTTTCTGTATCTGATATCGTTTGTTGGTTGTTACATGTTCTGAGCACATTGCTTCATTTCGTTAAGTTGTTCTTCTATTTGTAGTTTTAATTATGTTTCGTTTATCAACAATGCTGAGAAATAATTAGGATGTGTATAGAATTCTTGTTTTATTGGCGTGGCACATAATATTGGTGTTAAATGATAATTGATGTTTATGGGGGTTTAAATGTTCGATTGAACATTTTAGTAATGGTTTTGCTTATTTCAATGTACTACAGGTTTTCTTTCGCTTGAGGAGATTGACGAAGCAGAGTATGGCCTGACAATTCCAAAACCTGAAACGGTGAAACAGAAGTTGACATCAACAGCCAGCAAAAAGTCAAAGAAAGGTGAGCAAGACAATGTTGATGGCTGTGGGGGTGCATCGGGAGATGGTGAGGGTAGCATGAATAAGGAAGAGGGGGACAATATGAATATGGAAACAAACAAAAAAGGGAAGAAGGAGAAGAAGAAAAAAAAGAAAAAGAAGAAAAATAAGGTCAATAATGAAGCCCCAACTAGTGAGGAAGATGTGGCTGAAAATATAGGTGGCAGTGATAGTGATAGGATCGAGACAGAGGTTGGAGATGAAATGGATGGCGGTGATGATTTGGAGATGGAGAAGAAGCTGCAGAAGAAAAAAAAAGGAACAAAGGATCATGGAATTGGTTAGTATTATTATCATATAAAACTTTGTGGAGCATAGTCTTCTTGGTTTTTATACAAGCATTTGATTCATGAAATATTGTTATTCTTATTTAATCATTGAACTTGTCTCGTATTGTTTCATGGAGGCAAATTATATTTCTGTCATATTTGTGTGCTCTTTGTTAGAATTCAATCATTAGTTATTTGACCATTTTTTAGCAAGAAAATAATTTGATGTCATTGATGAATGTAATGTACAAAAAAGATAGGAAAAGCCCAAGCCACCATAGGTGGATTACAAAAATGACCTCCAACAAGCGACTATGATAGCATTCACAACAATAAAGAGCATTACAAAGCAAAATTTCCGTAAAACTATTAAAAGAGATAAGCTTATCTTTGAGAACCTGATTATTCCTTCCAAAGAATCTCTCTTCATTGCAAACGATATAGTTGCTTTTGTTCCTTTGAAAGGATGCTCATAAGGATTAGCGCTAGAAAGTCCACGGTGTTCTCCCGAATGCCTGTAGCGCCCAGCCAAATACATTTATCATTTAGTTCCAGTATAGCCGCACAATTGGAGAGTAAGCAAAAAGAAGGCATTGAGTTTTTGAACTTTCCCTGCACATAAAGCCTCAGCTTGAAGGGCTGCGGTAGTGTATGACATTCTTCCCTGTATACTATCAACCATATTGATTGCTTCATGGCTAAGTTTCCAAAGGGATGCTTTGATCTTTTTAGAATAGGATCCCTTCCTTATTGTCGTGTATGGAGGATTCTCGTTGGTGCCCAAACTATGGACTAAATTCATCATCGATGATTTAACAGTGAGTTTTCCAGAGAGATCTGTGAGCTGTATCCATGCATCCGGTGTCTCATTGATGCTCACCGTGTATCAATTGTGTACAAGGGTGGACCGTTCAGTAATTTCATCATCTTTGAGGAGTCTTCTGAGATTCAAATCCCAACTATTTGTTTCGCGAATCCATACCTCTGCCATGGTTTTGTTTGGTTTGTTGGAGAGGCTCAAATCATGGAGAAAGTTTTTGCCTAGCTACCAATTTCCAGCCAATGTGCATTTTCGGAAAAAGATGTAGTTATACTTAATACTGTTGTTGTTTTGATTAGATGAACAATTGTTGAATTGTAAGTGACTATTCAGAACTTTATTATATTTACACATTGCGTATAATCTGATTTGCATTTAGATAAAGAAATCAAGGATGAAGTTGAAAAGGATGCAGTTGATGAAACTGAATATTATGCATGGAATGAGTTGAGACTTCACCCTTTGCTTATGAAATCGATCTACAAACTTGGGTTTAAGGAACCTACAGCGATCCAGAAAGCTTGTATTCCAGCTGCTGCTTACCAGGGGAAGGTTAGTTTTCTTTCTTTTATTGCACGGGTGGAAAATGGACCATACTTTTGCCGGTCATTGAATTTTGCTCATGTGACAGGATGTTGTTGGTGCTGCCGAGACAGGATCTGGAAAAACACTAGCTTTTGGATTGCCAATCCTACAACGTTTATTGGACGAACGGGAAAAGTCTGGAAAGAAGTCTGAAGAAGAGGGAGCAGATGCAGGAAGATATGCTCCCAGAAGTCTTCTACGGGCTCTTATTATTACTCCTACTAGAGAACTTGCTATTCAGGTGGTTGTGATTTTTTATTTGATACTCACACATGGCTGGACGCTTAAATAAATATGTTTGTTGTGGAACAAGTGGGAGACAAAACATGCTAGGATCAACGTTATTAAGATAAGAAACACTAGGGATGACAATTTGAGGTTAAGAAAACTGTCTACCTTACAATGGTGTTCAAGGTCTCACAGTAGCGTTCTCTTTATTGTTTGTTTATTATTTATTGTTGTCATGACGTTTGTATTAACTGGAATGCCTTTATATCCCGTTCTCACTGTGGTTTCTATTTTATTCTCCTTTCACTCATTTTTTGAGTTGGTATCCTTTGAACACTTTCGTTTCTTTCTATTCATTCATTCATGAAACCTTTGTCTCCGATTAAAAAGAAAAAGCTACCCTCTTAAGTTCTTTTAATGTTATAAATCTAATTCTATTTTGTTTTATTTTTATTTTGGTGTTGGTAGCATGATGAATTTAACGTTCACCAATCCATAATGGAAAATACCACACAGAGTTCAAATTGTTTTATTTGGAATTTTGTATCTACTGAATTTGGGTTTAACTCCCTCTCTTTGGTCCTTCATTATCAGGTAACCGATCATCTCAAGGCAGTTGCAGTGGGTACAAATATCAGGGTGGTTCCAATCGTTGGTGGGATGTCCACTGAAAAGCAGGAAAGACTTTTAAGGATGAGGCCAGAGATTGTAGTTGGAACTCCAGGGCGGTTGTGGGAACTTATGTCGGGAGGAGAAAGGCATCTTGTTGAAGTGAGCGCCTTATGATACTGGTTAAACTTGTCCATATCTTCACTCTCCAATCATAAAAATGAATAGTCTAATTTTTTAATCTTGCCAACCTTTTTTGACTCCATCATCATCTATTATTTAAGCTCATTAATCAACATATTCGTTTTGTTGCAAACAAACTTCATCAATCTGTTGCCTTTAACTCCATAATGTTGTGGTTTATTTTCTTCGTGTGGTTTTCTTTTCCTGTTTAAATTGCTTATTTTTCTTTCCTGTGCAATTATCTCAATTATTTCCTCTTCTTCGTTAGCCTTGTAATATGTTGAGCACCAATGAAACCTACTTGTAAAGTAGGGAGTAGGCATAGTTGTAGAACTGCTCAGTTAGTCAGGTTCTATTCAAGATGTTAACCAATGACCTATAAAGCACCAACCCTTGTAAAATTTTGAAGTGTCGGTGTTGAACACATTGGTCATTGATACGCTCCGACATGCTGTTTTGCGTGTCAAATTTTTTTTTTCCTCCACTTTTTCACACGGCAGGGACATTCTCAGACATGACTAAGACATGTAATGTTAAAATGTTCCACGTTTTAGGTCTTTTAAGCCCATTCAAAAGAAAGCCAAATACCCAACAATTAAAGCCAAACTGACCACACGTATAAACCTCAAAATATTAGGGTTTTTTTCCATCATTTCCCAACCCTCACAACTGCTTATTAATGACAACAACCGAGACCATTGTCGGTTGTCGTCAACCACCAGCAACCACTGGTGAACAGGACAAAGATGGGGAAAATATGTAGTTGCTTGTTTGTTTCAAATCCTTGTAATTTCTTGTGTAGGACTTACTGGATATTGGATATTTTTAATGTTGTAGTTTTTTGTGTAAAGCTTATTCGATATTGGATATTGTAAATATTGTTTGTTAATTGTTATCTTATCATCATCTTTTTAATATATAGCATGGCTGTTATTTTGATGTTTAAAGGTAGAAATTTACATTAAAAGTATTAAATATTCATAACAGCTAAAAAATACACACATTTATTTAAACAAAAACTAACGTGTTTCCATCGTTTCGTGCTTGCTTTTTTGGAAATCAACTTGTTCTCGTGTCCGTGTTGCGTCGTATCCATGTATGTGCTTCTTTGTCAATGGCTAAGCTATAAATAGGATGATAATGTTGACGCTCTTCAAATTTTCTGTTTCAGTTGCAGACATTGTCTTTCTTTGTACTGGATGAGGCTGATAGGATGATAGAAAATGGACACTTTCGTGAGTTGCAGTCCATTATTGATATGCTCCCTGTGGCAAATTGTTCTACAGAAAATTCACAAAATGCAGAAAACTCTTCGACCAGTCCAAGTTCTCAAAGAAAGAAACGGCAAACACTTGTGTTTTCTGCAACATTGTCACTGTCTTCTGATTTTCGCAAGAAATTAAAGCGTGGATCATCCAGACCTAGTCAATCAGGAGGGATGGATGGTTTGAATTCTATAGAAGCTCTGTCTGAGAGAGCTGGGATTAGACCTAATGTTGCTATTATAAATCTGACTAACACATCGGTTTTGGCAAATAATCTTGAAGAATCATTTATAGAGTATGTGCCTTTTCATCTGATATCTAGCATTTTGTAACTCTTCTATTGTTTCTATTGTATATTTCATTTATATCATGTACTTGCACAAGGAATATTCAAAATGTTCCCCAACTGACTTATATTCACCCTATAAATGATGTTTTGTGGTTGAGGAAAGCCGATAACCTTTGCACCTTTTTTCATGTAGTAGGGCAGCTAAAATATTTCCCTCATTTCTAACCTTTTTTCATGTAGTACACGTCTGTACATCTTATTTTAGCTCTATTGCATTATGATCTGCATGACTTGGTTTTTGTCTTTTCGCTAGTACTCAGTGGTGTATAGCATTGTTTTCCTTGTATTGATATCCACCTCTTATAACTCTTTATGTCCATAATGACATACCGAAAGCCTGATCTGCATAATAATCAGTCGCTTGGGTCCTTATCATCTTTGCCTCCTAATTTTTGATAGATTACAGTTACATCAATTTGATAATTTCTTTGTGCCAGCAATTATATCAGGCTTTCGGTATGTCATACCATCAATGATGGTTGTGGCTGTCTTTTTGAGTTTTCTCTGCATTGATTAATTCTTCTCCAGTGGATGTGGAACATTACTGACTCATGACCTACTTGCAGATGTAGGGAAGAAGACAAGGATGCTTATTTGTATTACATTCTGTCTGTTTATGGAAAAGGCCGCACAATTGTCTTCTGCACATCCATTGCTGCACTACGTCATATTTCTGCTTTATTGTGCATTGTTGGTATCAATGTCTTGACTCTTCATGCTCAAAGGCAGCAACGAGCTCGCTTGAAGGTTAGCTTACTATTTAGAAGACACCCAGCTAGTATCTGACATAAAACTTTTCCATATGTGGAGGTGCTGACTTGGCAACAACTTGTACTACCAAAATTTATTTTCTATCATTTCATTGAAAAAGAAATAAGTGTCATTGAAAGTAGTGAAATTACTGTAGCAGTTCTCAAGAAGCTACAAAAACTCCAATTGGAAATGATCAAACAAAGAGTATAGTAATGAAACTGTGTGGAGGAAGAAGAGCTATAAATCGAAGATCTAGAAAGAATATTGTCTTGGACTTCCCCTACACCACCCTGTAAATCTTTGGAAAAATTCTTGTATTTATTTCAACCAAGTGATTTCACTTTATAGCTCTAATAGCATTGGACCAAATTAACTTAGTTTTCCTCTTTTAAGAAGATTAATACTAATGCAAAAAGGAAGATGTTTTTTCCTTTTCAGTTTCAGGTTAAATGTATCCTCTGAATATTAAACATAATTGATTTCATGTTATAAATTTTTTTAATTAGTTGTATCAGAGACTTCTGTTTTTGTTTATCGTAGGCAATCGATCGTTTCCGCGGAAGGGAAAATGGGATACTGATTGCCACTGACGTTGCAGCTAGAGGCCTTGATATTCCTGGTGTTCGAACTGTTGTCCACTATCAACTACCACATTCAGCTGAGGTTAGTAAGACACAACTTACTGTACACTTCTTCTGTCTAAGTGTTACTAAATGTTTTATTTGGCATTAGGTTTACGTTCATAGAAGTGGAAGAACAGCCAGAGCTTCTGCTGATGGATGCAGTATCGCATTGGTCTCTGCCAATGAAACTTCCAAATTTGCTACTCTGTGCAAATCTTTCTCTAAGGTAGCAGATTTACAGTGGTTTTTTAATTCTAGTTTCTACAGGCATGGGTCATTTGGGAATAAATCTTTATTGAAAAATTTACTCGATCATTTTCTTTGTTTTCTTTCCTTTCTCTGCCTGACTTACATTTTAAAGAAATAGTAGCTATCACTATTTGGTCCCTAGTTAGATTCAATGTTTCTATGTGAGGTTTGGTGGAAAAGCTTTTTTGCAATTATCTTTTAGGGTCTTATTTTACTTGATTAGAGGTCCTTCCTATTTTTACCTCATTCTTTTGTGGCCTCTCTTTTTGTGTGCACTTGTTTTCTTTCCTTTTTTTTTTTTTTTCCGCAATGAAAGTTGTTTATTCATCATAAAAAAGAAAGAGGTTTCTTTAATTTTTTTTGTAGTCTTTTTGGATGTATGTATTTTTTTGATAGGAAACAAAAACCATTTCATTGATGTATGAAATAGATACAAAAGAAAGTACTACCAGAGATAATTACAAGAATTGATGTAATGTCTTTTGGGCCATCCTCCTTATACTTGCTTCATTTGCTTTTGTTCTGTTAGGAAAGCTTCCAGCGATTTCCTGTTGATAATTCATACATGCCAGAGGTTCTAAAACGATTGTCTCTTGCACGCCAGATTGACAAGATTCTGCGGAAGGATTCTCAAGTAAACATTGACATAATTTCATGCCTATTTATTGATACATAGAAATTTATGTCTTGGCGCTTTTAAGTTTCATTCTTCTTGTTCCTTACTGTGTTAATTGGTGTCAATTGGCAGTTGATTTTTCTGTGCAATATCATAGTTCTAATCCTAGAGTTACGTTATCACTTATTTAGTTTTTGGTCGTTATGAATTTAAAGCTATGTTTCTGATTTCTAGGAGAAGGCAAAAAAAACCTGGTTTGAGCGGAATGCAGAGTTAGTGGAATTAGTAGTGGATAACGATGACAGTGAAGATGAGAGAGCAAACAATCATAAGCAGAAGAAATTTGGCTCCATGCAGTTAAAGAAATTGCAAGAGGTATTACCCGCAATGGATAAGTTCGCATTAAATTTTGGTGATATGGTAGATATGTTAATACCTTGAGTAACAATAATATTTTCCTTTTTCTAAAAAATTTTCATTACTAATTGCAGGAGCTCGGCAAGCTGCTTTCCCACCCCCTGCAACCGAAATCATTTTCACACCGTTATTTGGCCGGAGTAAGTATCTGCTAGTATTGTTAGAAGTTCAGTCCTTAAGTTTTCTCCCTTTTGCCCTTCATCGAGTTTCTGGATTAAGGATTTTCATTTTGTGAAATGTTGTAATATGTTATATGATACGATACTTCGCATCCAGGGAAAAAGTTCTTCCAGGTAAAGAAAGAAAGTGGGAGTAAGAAAATAACCGCTGTTTTTGCAGGGCAAACAACAACTTATCATAAAACATTCAGATCATGAATTATCCTGTTTTATTGGTTTTTTGAAATATTCTTTTCTGTTTTTATATGTGCCAATGTATTTGGAATGTATCTGTTTCACAGTCAATAGGGTGCCCCTAAGTTCGAATAATTTCTGGTTTCAGCCATTGGTCGTTAGCTGCTTTTGTTTTCTAATAACTTGTTATTCTCTCATTCCTTATCAGGCTGGGGTCTCACCTCTTCTGCAACATCAATTTGAAGAGATGGTCAAGCAGAACGGGACTGTTCAGAATACGGGAGATAACAAAAGGAGGAAGTTGGCTGCTATTGGCCAAGATCTTACGGAACCACTTCAAGCACTTCGAACCGGTGGTCAACAGGTAATGTGAAACATTTTCTACGGGTGAAGTGTTTTTTTCCGTGGGCAAAATTTCAACTCAGCATCCGTTTTGACAGGTACATATGGATGCAAAAGAGATGGCTGATAAACGGAAGAAAGTGGAGAACCTTAGGAGAAAGAAAAAAGAGGAGAAAAAACGTACACAACTAAAATCTTTACGACTTTTGATGGTTTTTCAAATTTTCATCTTTATATTTTCAGTTCAAAAGATCTTGTAGGAAAATCTACTCTCAGGTTCTTCATATTGCAATTATTTTCTTGCAGGCTTGCGTGATCAGCGAAGAAATAAACGGAAACAAATGAAAGGCAAGATTTAGAAGATTGGCCATTCTGGTAAACTGTGCATTAACAATTGATTAGAGCTTATGATAAGATGTTCTTGAGTAAGTTAAAGAGTTTTTAGTTCAGTTTTTTTTTCTTATAAAAACAAATTGAACAAAAAAAATGCCGATTTTGGTAATCTGTAGGCAGAAATCAAAATTTTCAGCAGAGATTTTAAGACATATTTGAGTCTGATTGAATAATATTTTATTTTTAATGCCAAAGCTAATACTGGAATATTTGAAATCTTCTAA

mRNA sequence

TTTTAAATAGTTTTGTACTCTTTCCTAAATGGCAGCAACTTCCTCCGCAGAGATTGCAGTTGTAATCTCTTTTCTTTCCCAGGAAACAAGCATTAGCAGGAGCAATTTGTTTTGCAGCCAAACTTGGGCGGTAGGCTGTATTCGAGAGTTCATAAATGGCTGAGGACCCAATGCAGTCGATATCTTCTCAAAAGAGAAGGCCAAAGAGGAAGAGAATCCAGAAAGACCCAGAATTGGACCGTCTCGATTCACTCTCATGGAAGTCATCAATCCCGAGGGACGACGCCTTGTCTGCTTTCATTGGATCCAACGATCTCGAAGGAGGTTTTCTTTCGCTTGAGGAGATTGACGAAGCAGAGTATGGCCTGACAATTCCAAAACCTGAAACGGTGAAACAGAAGTTGACATCAACAGCCAGCAAAAAGTCAAAGAAAGGTGAGCAAGACAATGTTGATGGCTGTGGGGGTGCATCGGGAGATGGTGAGGGTAGCATGAATAAGGAAGAGGGGGACAATATGAATATGGAAACAAACAAAAAAGGGAAGAAGGAGAAGAAGAAAAAAAAGAAAAAGAAGAAAAATAAGGTCAATAATGAAGCCCCAACTAGTGAGGAAGATGTGGCTGAAAATATAGGTGGCAGTGATAGTGATAGGATCGAGACAGAGGTTGGAGATGAAATGGATGGCGGTGATGATTTGGAGATGGAGAAGAAGCTGCAGAAGAAAAAAAAAGGAACAAAGGATCATGGAATTGATAAAGAAATCAAGGATGAAGTTGAAAAGGATGCAGTTGATGAAACTGAATATTATGCATGGAATGAGTTGAGACTTCACCCTTTGCTTATGAAATCGATCTACAAACTTGGGTTTAAGGAACCTACAGCGATCCAGAAAGCTTGTATTCCAGCTGCTGCTTACCAGGGGAAGGATGTTGTTGGTGCTGCCGAGACAGGATCTGGAAAAACACTAGCTTTTGGATTGCCAATCCTACAACGTTTATTGGACGAACGGGAAAAGTCTGGAAAGAAGTCTGAAGAAGAGGGAGCAGATGCAGGAAGATATGCTCCCAGAAGTCTTCTACGGGCTCTTATTATTACTCCTACTAGAGAACTTGCTATTCAGGTAACCGATCATCTCAAGGCAGTTGCAGTGGGTACAAATATCAGGGTGGTTCCAATCGTTGGTGGGATGTCCACTGAAAAGCAGGAAAGACTTTTAAGGATGAGGCCAGAGATTGTAGTTGGAACTCCAGGGCGGTTGTGGGAACTTATGTCGGGAGGAGAAAGGCATCTTGTTGAATTGCAGACATTGTCTTTCTTTGTACTGGATGAGGCTGATAGGATGATAGAAAATGGACACTTTCGTGAGTTGCAGTCCATTATTGATATGCTCCCTGTGGCAAATTGTTCTACAGAAAATTCACAAAATGCAGAAAACTCTTCGACCAGTCCAAGTTCTCAAAGAAAGAAACGGCAAACACTTGTGTTTTCTGCAACATTGTCACTGTCTTCTGATTTTCGCAAGAAATTAAAGCGTGGATCATCCAGACCTAGTCAATCAGGAGGGATGGATGGTTTGAATTCTATAGAAGCTCTGTCTGAGAGAGCTGGGATTAGACCTAATGTTGCTATTATAAATCTGACTAACACATCGGTTTTGGCAAATAATCTTGAAGAATCATTTATAGAATGTAGGGAAGAAGACAAGGATGCTTATTTGTATTACATTCTGTCTGTTTATGGAAAAGGCCGCACAATTGTCTTCTGCACATCCATTGCTGCACTACGTCATATTTCTGCTTTATTGTGCATTGTTGGTATCAATGTCTTGACTCTTCATGCTCAAAGGCAGCAACGAGCTCGCTTGAAGGCAATCGATCGTTTCCGCGGAAGGGAAAATGGGATACTGATTGCCACTGACGTTGCAGCTAGAGGCCTTGATATTCCTGGTGTTCGAACTGTTGTCCACTATCAACTACCACATTCAGCTGAGGTTTACGTTCATAGAAGTGGAAGAACAGCCAGAGCTTCTGCTGATGGATGCAGTATCGCATTGGTCTCTGCCAATGAAACTTCCAAATTTGCTACTCTGTGCAAATCTTTCTCTAAGGAAAGCTTCCAGCGATTTCCTGTTGATAATTCATACATGCCAGAGGTTCTAAAACGATTGTCTCTTGCACGCCAGATTGACAAGATTCTGCGGAAGGATTCTCAAGAGAAGGCAAAAAAAACCTGGTTTGAGCGGAATGCAGAGTTAGTGGAATTAGTAGTGGATAACGATGACAGTGAAGATGAGAGAGCAAACAATCATAAGCAGAAGAAATTTGGCTCCATGCAGTTAAAGAAATTGCAAGAGGAGCTCGGCAAGCTGCTTTCCCACCCCCTGCAACCGAAATCATTTTCACACCGTTATTTGGCCGGAGCTGGGGTCTCACCTCTTCTGCAACATCAATTTGAAGAGATGGTCAAGCAGAACGGGACTGTTCAGAATACGGGAGATAACAAAAGGAGGAAGTTGGCTGCTATTGGCCAAGATCTTACGGAACCACTTCAAGCACTTCGAACCGGTGGTCAACAGGTACATATGGATGCAAAAGAGATGGCTGATAAACGGAAGAAAGTGGAGAACCTTAGGAGAAAGAAAAAAGAGGAGAAAAAACGCTTGCGTGATCAGCGAAGAAATAAACGGAAACAAATGAAAGGCAAGATTTAGAAGATTGGCCATTCTGGTAAACTGTGCATTAACAATTGATTAGAGCTTATGATAAGATGTTCTTGAGTAAGTTAAAGAGTTTTTAGTTCAGTTTTTTTTTCTTATAAAAACAAATTGAACAAAAAAAATGCCGATTTTGGTAATCTGTAGGCAGAAATCAAAATTTTCAGCAGAGATTTTAAGACATATTTGAGTCTGATTGAATAATATTTTATTTTTAATGCCAAAGCTAATACTGGAATATTTGAAATCTTCTAA

Coding sequence (CDS)

ATGGCTGAGGACCCAATGCAGTCGATATCTTCTCAAAAGAGAAGGCCAAAGAGGAAGAGAATCCAGAAAGACCCAGAATTGGACCGTCTCGATTCACTCTCATGGAAGTCATCAATCCCGAGGGACGACGCCTTGTCTGCTTTCATTGGATCCAACGATCTCGAAGGAGGTTTTCTTTCGCTTGAGGAGATTGACGAAGCAGAGTATGGCCTGACAATTCCAAAACCTGAAACGGTGAAACAGAAGTTGACATCAACAGCCAGCAAAAAGTCAAAGAAAGGTGAGCAAGACAATGTTGATGGCTGTGGGGGTGCATCGGGAGATGGTGAGGGTAGCATGAATAAGGAAGAGGGGGACAATATGAATATGGAAACAAACAAAAAAGGGAAGAAGGAGAAGAAGAAAAAAAAGAAAAAGAAGAAAAATAAGGTCAATAATGAAGCCCCAACTAGTGAGGAAGATGTGGCTGAAAATATAGGTGGCAGTGATAGTGATAGGATCGAGACAGAGGTTGGAGATGAAATGGATGGCGGTGATGATTTGGAGATGGAGAAGAAGCTGCAGAAGAAAAAAAAAGGAACAAAGGATCATGGAATTGATAAAGAAATCAAGGATGAAGTTGAAAAGGATGCAGTTGATGAAACTGAATATTATGCATGGAATGAGTTGAGACTTCACCCTTTGCTTATGAAATCGATCTACAAACTTGGGTTTAAGGAACCTACAGCGATCCAGAAAGCTTGTATTCCAGCTGCTGCTTACCAGGGGAAGGATGTTGTTGGTGCTGCCGAGACAGGATCTGGAAAAACACTAGCTTTTGGATTGCCAATCCTACAACGTTTATTGGACGAACGGGAAAAGTCTGGAAAGAAGTCTGAAGAAGAGGGAGCAGATGCAGGAAGATATGCTCCCAGAAGTCTTCTACGGGCTCTTATTATTACTCCTACTAGAGAACTTGCTATTCAGGTAACCGATCATCTCAAGGCAGTTGCAGTGGGTACAAATATCAGGGTGGTTCCAATCGTTGGTGGGATGTCCACTGAAAAGCAGGAAAGACTTTTAAGGATGAGGCCAGAGATTGTAGTTGGAACTCCAGGGCGGTTGTGGGAACTTATGTCGGGAGGAGAAAGGCATCTTGTTGAATTGCAGACATTGTCTTTCTTTGTACTGGATGAGGCTGATAGGATGATAGAAAATGGACACTTTCGTGAGTTGCAGTCCATTATTGATATGCTCCCTGTGGCAAATTGTTCTACAGAAAATTCACAAAATGCAGAAAACTCTTCGACCAGTCCAAGTTCTCAAAGAAAGAAACGGCAAACACTTGTGTTTTCTGCAACATTGTCACTGTCTTCTGATTTTCGCAAGAAATTAAAGCGTGGATCATCCAGACCTAGTCAATCAGGAGGGATGGATGGTTTGAATTCTATAGAAGCTCTGTCTGAGAGAGCTGGGATTAGACCTAATGTTGCTATTATAAATCTGACTAACACATCGGTTTTGGCAAATAATCTTGAAGAATCATTTATAGAATGTAGGGAAGAAGACAAGGATGCTTATTTGTATTACATTCTGTCTGTTTATGGAAAAGGCCGCACAATTGTCTTCTGCACATCCATTGCTGCACTACGTCATATTTCTGCTTTATTGTGCATTGTTGGTATCAATGTCTTGACTCTTCATGCTCAAAGGCAGCAACGAGCTCGCTTGAAGGCAATCGATCGTTTCCGCGGAAGGGAAAATGGGATACTGATTGCCACTGACGTTGCAGCTAGAGGCCTTGATATTCCTGGTGTTCGAACTGTTGTCCACTATCAACTACCACATTCAGCTGAGGTTTACGTTCATAGAAGTGGAAGAACAGCCAGAGCTTCTGCTGATGGATGCAGTATCGCATTGGTCTCTGCCAATGAAACTTCCAAATTTGCTACTCTGTGCAAATCTTTCTCTAAGGAAAGCTTCCAGCGATTTCCTGTTGATAATTCATACATGCCAGAGGTTCTAAAACGATTGTCTCTTGCACGCCAGATTGACAAGATTCTGCGGAAGGATTCTCAAGAGAAGGCAAAAAAAACCTGGTTTGAGCGGAATGCAGAGTTAGTGGAATTAGTAGTGGATAACGATGACAGTGAAGATGAGAGAGCAAACAATCATAAGCAGAAGAAATTTGGCTCCATGCAGTTAAAGAAATTGCAAGAGGAGCTCGGCAAGCTGCTTTCCCACCCCCTGCAACCGAAATCATTTTCACACCGTTATTTGGCCGGAGCTGGGGTCTCACCTCTTCTGCAACATCAATTTGAAGAGATGGTCAAGCAGAACGGGACTGTTCAGAATACGGGAGATAACAAAAGGAGGAAGTTGGCTGCTATTGGCCAAGATCTTACGGAACCACTTCAAGCACTTCGAACCGGTGGTCAACAGGTACATATGGATGCAAAAGAGATGGCTGATAAACGGAAGAAAGTGGAGAACCTTAGGAGAAAGAAAAAAGAGGAGAAAAAACGCTTGCGTGATCAGCGAAGAAATAAACGGAAACAAATGAAAGGCAAGATTTAG

Protein sequence

MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLSLEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDNMNMETNKKGKKEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSDRIETEVGDEMDGGDDLEMEKKLQKKKKGTKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKEPTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGADAGRYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEIVVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPVANCSTENSQNAENSSTSPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEALSERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSIAALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVDNSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNHKQKKFGSMQLKKLQEELGKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTGDNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQRRNKRKQMKGKI

Homology

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BLAST of Cp4.1LG17g02190 vs. ExPASy Swiss-Prot
Match: Q93Y39 (DEAD-box ATP-dependent RNA helicase 13 OS=Arabidopsis thaliana OX=3702 GN=RH13 PE=2 SV=3)

HSP 1 Score: 806.6 bits (2082), Expect = 2.7e-232
Identity = 478/862 (55.45%), Postives = 614/862 (71.23%), Query Frame = 0


Query: 1   MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIP--RDDA----LSAFIGSNDL 60
           M     +S   +KR  +  + +++ + +R+DSL W SSIP   DD      + F GS  L
Sbjct: 1   MVTGDKESSLMKKRNKRSHKRKREEDFERIDSLPWSSSIPIGEDDEGESFSTLFSGSGQL 60

Query: 61  EGGFLSLEEIDEAEYGLTIP--KPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGS 120
           +GGFLSLEEIDEA+Y LT+P  + E  ++K +      + +   + ++G   A  DGEG 
Sbjct: 61  DGGFLSLEEIDEADYHLTLPTIESEITERKQSPEDDDDTNETVDEMIEG-EEAEEDGEGR 120

Query: 121 MNKEEGDNMNMETNKKGK----KEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSDRIE 180
            ++++ D+      K+ K    KEKKK+KKKKK K  NEA  +++  A +  G D+    
Sbjct: 121 DDEDDEDDEETRKKKEKKAKRNKEKKKEKKKKKQKKINEAAKNQDASAVSCDGDDT---- 180

Query: 181 TEVGDEMDGGDDLEMEKKLQKKKKGTKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPL 240
                                             ++++VE++ +   E+ AW+ +RLHPL
Sbjct: 181 ----------------------------------VEEQVEEEEI-PPEFSAWSSMRLHPL 240

Query: 241 LMKSIYKLGFKEPTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKS 300
           LMKSIY+L FKEPT IQKAC   AAYQGKDV+GAAETGSGKTLAFGLPILQRLLDEREK 
Sbjct: 241 LMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKV 300

Query: 301 GKKSEEEGADAGRYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTE 360
           GK    +G +A +YA    LRALIITPTRELA+QVT+HL+  A   +++VVPIVGGM +E
Sbjct: 301 GKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSE 360

Query: 361 KQERLLRMRPEIVVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSI 420
           KQER L+ +PEIVV TPGRLWELMS GE+HLVEL +LSFFVLDEADRM+E GHFRELQSI
Sbjct: 361 KQERRLKEKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSI 420

Query: 421 IDMLPVANCSTE-NSQNAENSSTSPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQ 480
           +D+LPV +   E  +Q  +++ T  +  +KKRQT VFSAT++LSSDFRKKLKRGSS+  Q
Sbjct: 421 LDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQ 480

Query: 481 SGGMDGLNSIEALSERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSV 540
           S   + +NSIE LSERAG+R NVAII+LT TS+LA  +EESFI+C E++KDAYLYYILSV
Sbjct: 481 SSSGE-VNSIEVLSERAGMRDNVAIIDLTTTSILAPKIEESFIKCEEKEKDAYLYYILSV 540

Query: 541 YGKGRTIVFCTSIAALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIAT 600
           +G+GRTIVFCTS+  LRHIS LL I+G++V TL ++ +QRARLK+IDRFR  ENGILIAT
Sbjct: 541 HGQGRTIVFCTSVTDLRHISGLLKILGLDVCTLFSEMKQRARLKSIDRFRASENGILIAT 600

Query: 601 DVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCK 660
           D+ ARG+DI  VRT++HY+LPHSAEVYVHR GRTARA ADGCSIAL+  NETSKF TLCK
Sbjct: 601 DLVARGIDIKNVRTIIHYKLPHSAEVYVHRCGRTARAFADGCSIALIEPNETSKFYTLCK 660

Query: 661 SFSKESFQRFPVDNSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDN 720
           SFS ES + FP+DNSYMP V KRL LARQI +I RK S+E A +TW +++AE +EL +D+
Sbjct: 661 SFSMESVKIFPLDNSYMPAVRKRLYLARQIYEIERKGSRENADRTWLKKHAESMELELDD 720

Query: 721 DDSEDERANNHKQKKFGSMQLKKLQEELGKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFE 780
           ++SE+ER +N +Q+K  S +L KL+EEL  LLSHP+QPK FS RY AG GVS L+Q+QF 
Sbjct: 721 EESEEERVDNVRQRKATSARLNKLKEELSTLLSHPMQPKKFSGRYFAGVGVSTLMQNQFV 780

Query: 781 EMVKQ-NGTVQNTGDNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLR 840
           E+ KQ    +Q  GD KRRKL  I Q+  EPLQALR GG ++     + A+KR+ + +L+
Sbjct: 781 ELKKQKQAQMQIGGDIKRRKLVVINQNCIEPLQALRAGGNEMLKMKGQSAEKRRDIASLK 821

Query: 841 RKKKEEKKRLRDQRRNKRKQMK 849
           +K+KEEK   RDQRRN++KQ K
Sbjct: 841 KKRKEEKIGRRDQRRNQKKQRK 821

[Close]

BLAST of Cp4.1LG17g02190 vs. ExPASy Swiss-Prot
Match: A2XVF7 (DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_016050 PE=3 SV=2)

HSP 1 Score: 745.0 bits (1922), Expect = 9.6e-214
Identity = 454/846 (53.66%), Postives = 581/846 (68.68%), Query Frame = 0


Query: 10  SSQKRRPKRKRIQKDPELDRLDSLSWKSSIPR--DDALSAFIGSNDLEGGFLSLEEIDEA 69
           +SQ R+ K+ R  K P      + +  SS     +D      G    EGGFL LEEIDEA
Sbjct: 25  TSQVRKGKKSRGAKKPRRAAAAAAASTSSAGTMVEDPFLVLAGGK--EGGFLELEEIDEA 84

Query: 70  EYGLTIPKPETVKQ--KLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDNMNMET 129
           ++G+     E + +  +      KK K+ ++   D      GDG+  +  EE      E 
Sbjct: 85  DFGIFGGAVEDLGEIDRKAGKDQKKKKRKKRKRGDDDYALPGDGDLVVECEE----EGEK 144

Query: 130 NKKGKKEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSDRIETEVGDEMDGGDDLEMEK 189
            +K  K+K++ +KK+K K   E   S+EDV++       D +E     +M  G+D+E   
Sbjct: 145 GEKRVKKKRRSRKKRKVKEMEEKMESKEDVSD-------DNVE-----DMQDGNDME--- 204

Query: 190 KLQKKKKGTKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKEPTAIQ 249
                             +D  +   + E E YAW ELRLHPLL+ ++ +LGFKEPT IQ
Sbjct: 205 ------------------QDNNDGLILGEDEVYAWRELRLHPLLITAVRRLGFKEPTPIQ 264

Query: 250 KACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGADAGRYAPR 309
           KAC PAAA+QGKDV+GAAETGSGKTLAFGLPILQRLL+E+EK+ + S E+ +     +  
Sbjct: 265 KACFPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEQEKAMRLSREDESTQDENSRE 324

Query: 310 SLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEIVVGTP 369
           S LRALI+TPTRELA QV DHLK  A    I+VVPIVGG+S EKQERLL+ +PEIVVGTP
Sbjct: 325 SPLRALILTPTRELAKQVCDHLKEAAKFLRIQVVPIVGGLSMEKQERLLKRKPEIVVGTP 384

Query: 370 GRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPVANCSTENSQNA 429
           GRLWELMS G +HL++L +LSFFVLDEADRMIE GHF ELQSII+MLPV N S E +   
Sbjct: 385 GRLWELMSTGNQHLIKLHSLSFFVLDEADRMIERGHFHELQSIIEMLPVTNGSDEQTVGT 444

Query: 430 ENS-STSPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEALSERA 489
             S  T P  Q KKRQT VFSATL+LS++FRKKLKRG      S   D L+SIEALS++A
Sbjct: 445 TPSCETVPILQIKKRQTFVFSATLALSANFRKKLKRGLVTAKASASTD-LSSIEALSKQA 504

Query: 490 GIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSIAALR 549
            ++PN  I++LT  S+L   LEESFIEC ++DKDAYLYYILSV+G+GRTI+FCTSIAALR
Sbjct: 505 RMKPNAEIVDLTKASILPEKLEESFIECSDDDKDAYLYYILSVHGQGRTIIFCTSIAALR 564

Query: 550 HISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVRTVVH 609
           H+S++L ++GINVLT HAQ QQRAR+KA+DRFR  EN IL+ATD  ARG+D   VRTV+H
Sbjct: 565 HLSSILRVLGINVLTNHAQMQQRARMKAVDRFRESENSILVATDGFARGMDFDDVRTVIH 624

Query: 610 YQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVDNSYM 669
           YQLPHS +VY+HRSGRTAR S  GCSIAL+S  + +KF +LCKS SKE+ Q+FPVD++YM
Sbjct: 625 YQLPHSTDVYIHRSGRTARKSMAGCSIALISPADKAKFYSLCKSLSKENLQQFPVDHAYM 684

Query: 670 PEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNHKQKKFG 729
           P V+ RL+LARQIDKI RK+SQE A K+W +RNAE + L+++  DSE+ER   HKQ+K  
Sbjct: 685 PAVMNRLTLARQIDKITRKNSQENANKSWLQRNAESMGLLLETSDSEEERVQGHKQRKAT 744

Query: 730 SMQLKKLQEELGKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQN--GTVQNTGDN 789
           S  L+KLQ++L +LL  PLQPK+FS RYLAGAGVSPLLQ Q EE+ K+N  G+  +   N
Sbjct: 745 SANLQKLQQDLSELLQRPLQPKTFSRRYLAGAGVSPLLQKQLEELSKRNVKGSA-SVNAN 804

Query: 790 KRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQRRN 849
           K  +   IGQD  EPLQAL+  GQ+V +   +  +KR+  EN RRKK++EKK  R+Q+R 
Sbjct: 805 KGSRFVVIGQDQIEPLQALQNSGQEVCVSIDKQREKRRLAENWRRKKQKEKKSTREQKRK 829

[Close]

BLAST of Cp4.1LG17g02190 vs. ExPASy Swiss-Prot
Match: A3AVH5 (DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0510400 PE=2 SV=2)

HSP 1 Score: 745.0 bits (1922), Expect = 9.6e-214
Identity = 454/846 (53.66%), Postives = 581/846 (68.68%), Query Frame = 0


Query: 10  SSQKRRPKRKRIQKDPELDRLDSLSWKSSIPR--DDALSAFIGSNDLEGGFLSLEEIDEA 69
           +SQ R+ K+ R  K P      + +  SS     +D      G    EGGFL LEEIDEA
Sbjct: 25  TSQVRKGKKSRGAKKPRRAAAAAAASTSSAGTMVEDPFLVLAGGK--EGGFLELEEIDEA 84

Query: 70  EYGLTIPKPETVKQ--KLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDNMNMET 129
           ++G+     E + +  +      KK K+ ++   D      GDG+  +  EE      E 
Sbjct: 85  DFGIFGGAVEDLGEIDRKAGKDQKKKKRKKRKRGDDDYALPGDGDLVVECEE----EGEK 144

Query: 130 NKKGKKEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSDRIETEVGDEMDGGDDLEMEK 189
            +K  K+K++ +KK+K K   E   S+EDV++       D +E     +M  G+D+E   
Sbjct: 145 GEKRVKKKRRSRKKRKVKEMEEKMESKEDVSD-------DNVE-----DMQDGNDME--- 204

Query: 190 KLQKKKKGTKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKEPTAIQ 249
                             +D  +   + E E YAW ELRLHPLL+ ++ +LGFKEPT IQ
Sbjct: 205 ------------------QDNNDGLILGEDEVYAWRELRLHPLLITAVRRLGFKEPTPIQ 264

Query: 250 KACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGADAGRYAPR 309
           KAC PAAA+QGKDV+GAAETGSGKTLAFGLPILQRLL+E+EK+ + S E+ +     +  
Sbjct: 265 KACFPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEQEKAMRLSREDESTQDENSRE 324

Query: 310 SLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEIVVGTP 369
           S LRALI+TPTRELA QV DHLK  A    I+VVPIVGG+S EKQERLL+ +PEIVVGTP
Sbjct: 325 SPLRALILTPTRELAKQVCDHLKEAAKFLRIQVVPIVGGLSMEKQERLLKRKPEIVVGTP 384

Query: 370 GRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPVANCSTENSQNA 429
           GRLWELMS G +HL++L +LSFFVLDEADRMIE GHF ELQSII+MLPV N S E +   
Sbjct: 385 GRLWELMSTGNQHLIKLHSLSFFVLDEADRMIERGHFHELQSIIEMLPVTNGSDEQTVGT 444

Query: 430 ENS-STSPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEALSERA 489
             S  T P  Q KKRQT VFSATL+LS++FRKKLKRG      S   D L+SIEALS++A
Sbjct: 445 TPSCETVPILQIKKRQTFVFSATLALSANFRKKLKRGLVTAKASASTD-LSSIEALSKQA 504

Query: 490 GIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSIAALR 549
            ++PN  I++LT  S+L   LEESFIEC ++DKDAYLYYILSV+G+GRTI+FCTSIAALR
Sbjct: 505 RMKPNAEIVDLTKASILPEKLEESFIECSDDDKDAYLYYILSVHGQGRTIIFCTSIAALR 564

Query: 550 HISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVRTVVH 609
           H+S++L ++GINVLT HAQ QQRAR+KA+DRFR  EN IL+ATD  ARG+D   VRTV+H
Sbjct: 565 HLSSILRVLGINVLTNHAQMQQRARMKAVDRFRESENSILVATDGFARGMDFDDVRTVIH 624

Query: 610 YQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVDNSYM 669
           YQLPHS +VY+HRSGRTAR S  GCSIAL+S  + +KF +LCKS SKE+ Q+FPVD++YM
Sbjct: 625 YQLPHSTDVYIHRSGRTARKSMAGCSIALISPADKAKFYSLCKSLSKENLQQFPVDHAYM 684

Query: 670 PEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNHKQKKFG 729
           P V+ RL+LARQIDKI RK+SQE A K+W +RNAE + L+++  DSE+ER   HKQ+K  
Sbjct: 685 PAVMNRLTLARQIDKITRKNSQENANKSWLQRNAESMGLLLETSDSEEERVQGHKQRKAT 744

Query: 730 SMQLKKLQEELGKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQN--GTVQNTGDN 789
           S  L+KLQ++L +LL  PLQPK+FS RYLAGAGVSPLLQ Q EE+ K+N  G+  +   N
Sbjct: 745 SANLQKLQQDLSELLQRPLQPKTFSRRYLAGAGVSPLLQKQLEELSKRNVKGSA-SVNAN 804

Query: 790 KRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQRRN 849
           K  +   IGQD  EPLQAL+  GQ+V +   +  +KR+  EN RRKK++EKK  R+Q+R 
Sbjct: 805 KGSRFVVIGQDQIEPLQALQNSGQEVCVSIDKQREKRRLAENWRRKKQKEKKSTREQKRK 829

[Close]

BLAST of Cp4.1LG17g02190 vs. ExPASy Swiss-Prot
Match: Q54TD7 (ATP-dependent RNA helicase ddx24 OS=Dictyostelium discoideum OX=44689 GN=ddx24 PE=3 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.5e-102
Identity = 284/860 (33.02%), Postives = 444/860 (51.63%), Query Frame = 0


Query: 12  QKRRPKRKRIQKDPELDRLDSLSW--------KSSIPRDDALSAFIGSNDLEGGFLSLEE 71
           QK++ K+++ Q+    ++L + S         K+  P D    +  G++D +  +   ++
Sbjct: 53  QKQKQKQEQEQEQKPTNKLTTKSTTKSTPVQNKNQKPVDKKRKSKKGNDDSDNEYSGYQD 112

Query: 72  IDEA--EYGLTIPKPETVKQKLT-------------STASKKSKKGEQDNVDGCGGASGD 131
             +   EY     KP  +K   T              T   K K+ +   V        D
Sbjct: 113 DSDQDDEYSAAKKKPRIIKPTETVDMGTELLNSFVEGTVHNKKKQRKGIKVK---QIIDD 172

Query: 132 GEGSMNKEEGDNMNMETNKKGKKEKKKKKKKKK-----NKVNNEAPTSEEDVAENIGGSD 191
            +     EE +    +  +K K++++K+K+ +K     NK NN+    +E+  +     +
Sbjct: 173 NDNDFEDEEEEVKPQQKLQKQKQQEQKQKQPQKQPQQPNKKNNKKELQKEEEEQMEEEKE 232

Query: 192 SDRIETEVGDEMDGGDDLEMEK-KLQKKKKGTKDH-------GIDKEIKDE--VEKDAVD 251
            + ++ E  +E +    ++ +K K QK+ +  K +          KEI ++  + K+  D
Sbjct: 233 EEEVQQEEEEEKEIKKPIKEKKVKTQKQIEAAKKNINKLEKIKKRKEISEQKTISKEEQD 292

Query: 252 ETEYYAWNELRLHPLLMKSIYKLGFKEPTAIQKACIPAAAYQGKDVVGAAETGSGKTLAF 311
           + +   WN   L PL++K +  LGF +PT IQ + IP A   G DV+GAA+TGSGKTLAF
Sbjct: 293 QLDMSEWNSYNLDPLILKGLRSLGFSKPTEIQSSVIPVAVSSGYDVIGAAQTGSGKTLAF 352

Query: 312 GLPILQRLLDEREKSG---------------------KKSEEEGADAGRYAPRSLLRALI 371
           G+P++QR+L    K G                     ++ EEE  + GR      L +L+
Sbjct: 353 GIPMVQRILQHLRKHGQNVENKANKQQNDNDDENEDVEEEEEEEEEEGRSKEYRKLFSLV 412

Query: 372 ITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEIVVGTPGRLWELM 431
           I PTRELAIQVT+H+K++   TN++V+ IVGGM++++Q+R+L  RPEIVV TPGRLWEL+
Sbjct: 413 ICPTRELAIQVTNHIKSIISHTNLKVISIVGGMASQRQQRVLSKRPEIVVATPGRLWELI 472

Query: 432 SGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPVANCSTENSQNAENSSTSP 491
           + G +HLVEL++L    +DEADRM+E GHF EL+SI+  LP+   +    +  +   T  
Sbjct: 473 TEGHQHLVELESLLCLGIDEADRMVEQGHFAELESILKTLPIHRTAMSKKERLKKKETEE 532

Query: 492 SSQRK--------------------------------------------KRQTLVFSATL 551
              ++                                            KRQT VFSATL
Sbjct: 533 KRNKRRKVDKLNDKGEMIKGDQDDMDDQIPDEEMEELEQEEQNHLTTTHKRQTFVFSATL 592

Query: 552 SLSSDFRKKLKRGSSRPSQSGGMDGLNSIEALSERAGIRPNVAIINLTNTSVLANNLEES 611
                    +    +  SQ      L  IE L E+   + +  +I++T   + A NL E+
Sbjct: 593 -------VNIPGDGAPTSQKKKYRKLTPIENLIEKVRFQRDYKLIDVTQKRLTAKNLLET 652

Query: 612 FIECREEDKDAYLYYILSVYGKGRTIVFCTSIAALRHISALLCIVGINVLTLHAQRQQRA 671
            I C  E+KD YLYY +  Y  GRT+VF  SI   R +  +  I+ + V  LHAQ QQ+ 
Sbjct: 653 KIFCNLEEKDMYLYYFVERY-PGRTLVFVNSIDCARRLIPIFNILEVPVFALHAQMQQKQ 712

Query: 672 RLKAIDRFRGRENGILIATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASADG 731
           RLK +DRFR  +N +LIATDVAARGLDIP V+ V+HYQ+P + ++Y+HRSGRTAR+  DG
Sbjct: 713 RLKNLDRFRTLDNVVLIATDVAARGLDIPLVQHVIHYQVPRTTQLYIHRSGRTARSDQDG 772

Query: 732 CSIALVSANETSKFATLCKSFSKESFQRFPVDNSYMPEVLKRLSLARQIDKILRKDSQEK 762
            S+ LV+  E   +  L  S  +     FP D  YM  V  R+ LA++IDK+  +  ++ 
Sbjct: 773 ISVVLVTPKERPLYIKLDSSI-EHDIGNFPTDIRYMEGVRDRIELAKEIDKLSHQSLKDN 832

[Close]

BLAST of Cp4.1LG17g02190 vs. ExPASy Swiss-Prot
Match: P0CQ91 (ATP-dependent RNA helicase MAK5 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=MAK5 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.9e-82
Identity = 258/718 (35.93%), Postives = 376/718 (52.37%), Query Frame = 0


Query: 74  PKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDNMNMETNKK--GKK 133
           P  E   +K  +  +   K  +  +  G  G    G G M  EE +++ +E  +   G+K
Sbjct: 23  PTTEKKPKKYVTADTLTWKPVKTSSFSGIDG----GGGMMMLEELEDVGIEWEETDGGRK 82

Query: 134 EKKKKKKKKKNKVNNEAPTSEEDVAENIGGSD--SDRIETEVGDEMDGGDDLEMEKKLQ- 193
             K  + + K     +    EE   E  G  +  S   ETE G + D  + +E + + + 
Sbjct: 83  IAKFVEVESKTSKGKKNAAQEEPNQEGRGDDEKASSASETEEGKKADDKEAVEEDDEEEF 142

Query: 194 KKKKGTKDHGIDKEIKDEVEKDAVDETEYY------AWNELRLHPLLMKSIYKLGFKEPT 253
               G  +   D    DE E   +D+   +       W+ + LHP L +S     F  PT
Sbjct: 143 PDFAGFAEE--DLNAADEEEHPNLDDEPAFNDDLLPEWSSISLHPSLKRSFLASSFTAPT 202

Query: 254 AIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGADAGRY 313
           AIQ   IP A   G+DVVG AETGSGKTLA+ LPIL  LL +R+          + AG  
Sbjct: 203 AIQSRAIP-AGITGRDVVGVAETGSGKTLAYSLPILHYLLGQRK----------SKAGIK 262

Query: 314 APRSLLRALIITPTRELAIQVTDHLKAV---AVGT----------NIRVVPIVGGMSTEK 373
            P   L AL++ PTRELA+QV DHL A+   A+ T           + V  +VGG+S +K
Sbjct: 263 RP---LSALVLCPTRELALQVMDHLNALLKHALATPDGEKPQGPPRVSVGSVVGGLSAQK 322

Query: 374 QERLLRMRPEIVVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSII 433
           Q+R+L    +++V TPGRLW+L+   +     ++TL F V+DEADRMIENGHF EL+SI+
Sbjct: 323 QKRILERGCDVIVATPGRLWDLIKADDELATSVRTLRFLVIDEADRMIENGHFAELESIV 382

Query: 434 DMLPVANCSTENSQN-----AENSSTSPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSR 493
            +   +        +     A  +    S+ R+  QT VFSAT  LS D +K LKR S  
Sbjct: 383 KLTQRSTAQQGPDDDDPVFQAMATLFEESTAREDMQTFVFSAT--LSKDLQKNLKRRSR- 442

Query: 494 PSQSGGMDGLNSIEALSERAGIR-PNVAIINLTNTSVLANNLEESFIECREEDKDAYLYY 553
            S  G     +++E L E+   R  N  +I+L+    + ++L ES IE  ++DKD YLYY
Sbjct: 443 -SWKGKGKRSSTLEDLVEKLDFRDENPEVIDLSPEGGVVSSLRESMIESTKDDKDLYLYY 502

Query: 554 ILSVYGKGRTIVFCTSIAALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGI 613
            L  Y  GR+IVF  SI ++R +  LL ++ + V  LH+  QQ+ RLK +DRF+    GI
Sbjct: 503 FLLRY-PGRSIVFVNSIDSIRRLLPLLTLLQLPVFPLHSHLQQKQRLKNLDRFKSNPKGI 562

Query: 614 LIATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFA 673
           LIATDVAARGLDIP V  VVH+ LP +A+ Y+HRSGRTARA  +G ++ LVS +E S   
Sbjct: 563 LIATDVAARGLDIPQVDHVVHFNLPRTADAYIHRSGRTARAQNEGFALQLVSPDEKSVQR 622

Query: 674 TLCKSFSK-ESFQRFPVDNSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVE 733
            L KS  +       P++  ++P + +RL +A +I+K   + ++    K W    AE ++
Sbjct: 623 ALMKSLERTHELPDLPIEAGFLPSLRERLRVATEIEKAQHRATKATHDKNWLLEAAEAMD 682

Query: 734 LVVD----NDDSEDERANNHKQKK----FGSMQLKKLQEELGKLLSHPLQPKSFSHRY 753
           + +D    + + +D  A  +K KK     G   ++ L+ EL  LL   L  +  S RY
Sbjct: 683 IDIDPSMLDGEDDDPDAPYYKPKKQDRGKGKASVENLKMELKALLQEKLVARGVSIRY 715

[Close]

BLAST of Cp4.1LG17g02190 vs. NCBI nr
Match: XP_023514560.1 (DEAD-box ATP-dependent RNA helicase 13 [Cucurbita pepo subsp. pepo] >XP_023514561.1 DEAD-box ATP-dependent RNA helicase 13 [Cucurbita pepo subsp. pepo] >XP_023514562.1 DEAD-box ATP-dependent RNA helicase 13 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1581 bits (4094), Expect = 0.0
Identity = 851/851 (100.00%), Postives = 851/851 (100.00%), Query Frame = 0


Query: 1   MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS 60
           MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS
Sbjct: 1   MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS 60

Query: 61  LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDN 120
           LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDN
Sbjct: 61  LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDN 120

Query: 121 MNMETNKKGKKEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSDRIETEVGDEMDGGDD 180
           MNMETNKKGKKEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSDRIETEVGDEMDGGDD
Sbjct: 121 MNMETNKKGKKEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSDRIETEVGDEMDGGDD 180

Query: 181 LEMEKKLQKKKKGTKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKE 240
           LEMEKKLQKKKKGTKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKE
Sbjct: 181 LEMEKKLQKKKKGTKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKE 240

Query: 241 PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGADAG 300
           PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGADAG
Sbjct: 241 PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGADAG 300

Query: 301 RYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI 360
           RYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI
Sbjct: 301 RYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI 360

Query: 361 VVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPVANCSTE 420
           VVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPVANCSTE
Sbjct: 361 VVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPVANCSTE 420

Query: 421 NSQNAENSSTSPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEAL 480
           NSQNAENSSTSPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEAL
Sbjct: 421 NSQNAENSSTSPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEAL 480

Query: 481 SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI 540
           SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI
Sbjct: 481 SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI 540

Query: 541 AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR 600
           AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR
Sbjct: 541 AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR 600

Query: 601 TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD 660
           TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD
Sbjct: 601 TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD 660

Query: 661 NSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNHKQ 720
           NSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNHKQ
Sbjct: 661 NSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNHKQ 720

Query: 721 KKFGSMQLKKLQEELGKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG 780
           KKFGSMQLKKLQEELGKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG
Sbjct: 721 KKFGSMQLKKLQEELGKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG 780

Query: 781 DNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR 840
           DNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR
Sbjct: 781 DNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR 840

Query: 841 RNKRKQMKGKI 851
           RNKRKQMKGKI
Sbjct: 841 RNKRKQMKGKI 851

[Close]

BLAST of Cp4.1LG17g02190 vs. NCBI nr
Match: KAG6593806.1 (DEAD-box ATP-dependent RNA helicase 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1563 bits (4046), Expect = 0.0
Identity = 841/851 (98.82%), Postives = 844/851 (99.18%), Query Frame = 0


Query: 1   MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS 60
           MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS
Sbjct: 1   MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS 60

Query: 61  LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDN 120
           LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDN
Sbjct: 61  LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDN 120

Query: 121 MNMETNKKGKKEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSDRIETEVGDEMDGGDD 180
           MNMETNKKGKKEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSD +ETEVGDEMDGGDD
Sbjct: 121 MNMETNKKGKKEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSDGVETEVGDEMDGGDD 180

Query: 181 LEMEKKLQKKKKGTKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKE 240
           LEMEKKLQKKKKGTKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKE
Sbjct: 181 LEMEKKLQKKKKGTKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKE 240

Query: 241 PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGADAG 300
           PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEG DAG
Sbjct: 241 PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGVDAG 300

Query: 301 RYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI 360
           RYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI
Sbjct: 301 RYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI 360

Query: 361 VVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPVANCSTE 420
           VVGTPGRLWELMSGGE+HLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLP A+CSTE
Sbjct: 361 VVGTPGRLWELMSGGEKHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPAASCSTE 420

Query: 421 NSQNAENSSTSPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEAL 480
           N QNAENS T PSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEAL
Sbjct: 421 NPQNAENSLTIPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEAL 480

Query: 481 SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI 540
           SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI
Sbjct: 481 SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI 540

Query: 541 AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR 600
           AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR
Sbjct: 541 AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR 600

Query: 601 TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD 660
           TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD
Sbjct: 601 TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD 660

Query: 661 NSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNHKQ 720
           NSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNHKQ
Sbjct: 661 NSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNHKQ 720

Query: 721 KKFGSMQLKKLQEELGKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG 780
           KKFGSMQLKKLQEEL KLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG
Sbjct: 721 KKFGSMQLKKLQEELDKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG 780

Query: 781 DNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR 840
           DNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR
Sbjct: 781 DNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR 840

Query: 841 RNKRKQMKGKI 851
           RNKRKQMKGKI
Sbjct: 841 RNKRKQMKGKI 851

[Close]

BLAST of Cp4.1LG17g02190 vs. NCBI nr
Match: XP_022964342.1 (DEAD-box ATP-dependent RNA helicase 13 [Cucurbita moschata] >XP_022964343.1 DEAD-box ATP-dependent RNA helicase 13 [Cucurbita moschata] >XP_022964344.1 DEAD-box ATP-dependent RNA helicase 13 [Cucurbita moschata])

HSP 1 Score: 1560 bits (4038), Expect = 0.0
Identity = 841/851 (98.82%), Postives = 843/851 (99.06%), Query Frame = 0


Query: 1   MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS 60
           MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS
Sbjct: 1   MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS 60

Query: 61  LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDN 120
           LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDN
Sbjct: 61  LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDN 120

Query: 121 MNMETNKKGKKEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSDRIETEVGDEMDGGDD 180
           M+METNKKGKKEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSD IETEVGDEMDGGDD
Sbjct: 121 MSMETNKKGKKEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSDGIETEVGDEMDGGDD 180

Query: 181 LEMEKKLQKKKKGTKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKE 240
           LEMEKKLQKKKKGTKDHGIDKEIKDEVEK AVDETEYYAWNELRLHPLLMKSIYKLGFKE
Sbjct: 181 LEMEKKLQKKKKGTKDHGIDKEIKDEVEKVAVDETEYYAWNELRLHPLLMKSIYKLGFKE 240

Query: 241 PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGADAG 300
           PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEG DAG
Sbjct: 241 PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGVDAG 300

Query: 301 RYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI 360
           RYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI
Sbjct: 301 RYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI 360

Query: 361 VVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPVANCSTE 420
           VVGTPGRLWELMSGGE+HLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLP ANCSTE
Sbjct: 361 VVGTPGRLWELMSGGEKHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPAANCSTE 420

Query: 421 NSQNAENSSTSPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEAL 480
           N QNAENS T PSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEAL
Sbjct: 421 NPQNAENSLTIPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEAL 480

Query: 481 SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI 540
           SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI
Sbjct: 481 SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI 540

Query: 541 AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR 600
           AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR
Sbjct: 541 AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR 600

Query: 601 TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD 660
           TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD
Sbjct: 601 TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD 660

Query: 661 NSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNHKQ 720
           NSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNHKQ
Sbjct: 661 NSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNHKQ 720

Query: 721 KKFGSMQLKKLQEELGKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG 780
           KKFGSMQLKKLQEEL KLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG
Sbjct: 721 KKFGSMQLKKLQEELDKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG 780

Query: 781 DNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR 840
           DNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR
Sbjct: 781 DNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR 840

Query: 841 RNKRKQMKGKI 851
           RNKRKQMKGKI
Sbjct: 841 RNKRKQMKGKI 851

[Close]

BLAST of Cp4.1LG17g02190 vs. NCBI nr
Match: KAG7026140.1 (DEAD-box ATP-dependent RNA helicase 13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1559 bits (4036), Expect = 0.0
Identity = 840/851 (98.71%), Postives = 843/851 (99.06%), Query Frame = 0


Query: 1   MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS 60
           MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS
Sbjct: 1   MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS 60

Query: 61  LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDN 120
           LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSM+KEEGDN
Sbjct: 61  LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMSKEEGDN 120

Query: 121 MNMETNKKGKKEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSDRIETEVGDEMDGGDD 180
           MNMETNKKGKKEKKKKKKKKKNKVNN APTSEEDVAENIGGSDSD IETEVGDEMDGGDD
Sbjct: 121 MNMETNKKGKKEKKKKKKKKKNKVNNVAPTSEEDVAENIGGSDSDGIETEVGDEMDGGDD 180

Query: 181 LEMEKKLQKKKKGTKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKE 240
           LE+EKKLQKKKKGTKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKE
Sbjct: 181 LEIEKKLQKKKKGTKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKE 240

Query: 241 PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGADAG 300
           PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEG DAG
Sbjct: 241 PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGVDAG 300

Query: 301 RYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI 360
           RYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI
Sbjct: 301 RYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI 360

Query: 361 VVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPVANCSTE 420
           VVGTPGRLWELMSGGE+HLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLP ANCSTE
Sbjct: 361 VVGTPGRLWELMSGGEKHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPAANCSTE 420

Query: 421 NSQNAENSSTSPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEAL 480
           N QNAENS T PSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEAL
Sbjct: 421 NPQNAENSLTIPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEAL 480

Query: 481 SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI 540
           SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI
Sbjct: 481 SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI 540

Query: 541 AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR 600
           AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR
Sbjct: 541 AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR 600

Query: 601 TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD 660
           TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD
Sbjct: 601 TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD 660

Query: 661 NSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNHKQ 720
           NSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNHKQ
Sbjct: 661 NSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNHKQ 720

Query: 721 KKFGSMQLKKLQEELGKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG 780
           KKFGSMQLKKLQEEL KLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG
Sbjct: 721 KKFGSMQLKKLQEELDKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG 780

Query: 781 DNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR 840
           DNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR
Sbjct: 781 DNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR 840

Query: 841 RNKRKQMKGKI 851
           RNKRKQMKGKI
Sbjct: 841 RNKRKQMKGKI 851

[Close]

BLAST of Cp4.1LG17g02190 vs. NCBI nr
Match: XP_023000463.1 (DEAD-box ATP-dependent RNA helicase 13 [Cucurbita maxima] >XP_023000464.1 DEAD-box ATP-dependent RNA helicase 13 [Cucurbita maxima] >XP_023000465.1 DEAD-box ATP-dependent RNA helicase 13 [Cucurbita maxima])

HSP 1 Score: 1548 bits (4009), Expect = 0.0
Identity = 834/851 (98.00%), Postives = 840/851 (98.71%), Query Frame = 0


Query: 1   MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS 60
           MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS
Sbjct: 1   MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS 60

Query: 61  LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDN 120
           LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDN
Sbjct: 61  LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDN 120

Query: 121 MNMETNKKGKKEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSDRIETEVGDEMDGGDD 180
           MNMETNKKGKKEKKKKKKKKKNKVNNEAPTSEEDV E IGGSD D IETEVGDE+DGGDD
Sbjct: 121 MNMETNKKGKKEKKKKKKKKKNKVNNEAPTSEEDVGEIIGGSDGDGIETEVGDELDGGDD 180

Query: 181 LEMEKKLQKKKKGTKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKE 240
           LEMEKKLQK+KK TKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKE
Sbjct: 181 LEMEKKLQKEKKETKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKE 240

Query: 241 PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGADAG 300
           PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEG DAG
Sbjct: 241 PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGVDAG 300

Query: 301 RYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI 360
           RYA RSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI
Sbjct: 301 RYARRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI 360

Query: 361 VVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPVANCSTE 420
           VVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLP ANCSTE
Sbjct: 361 VVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPAANCSTE 420

Query: 421 NSQNAENSSTSPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEAL 480
           NSQNAENSST PSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQ+GGMDGLNSIEAL
Sbjct: 421 NSQNAENSSTIPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQAGGMDGLNSIEAL 480

Query: 481 SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI 540
           SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI
Sbjct: 481 SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI 540

Query: 541 AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR 600
           AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR
Sbjct: 541 AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR 600

Query: 601 TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD 660
           TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD
Sbjct: 601 TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD 660

Query: 661 NSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNHKQ 720
           NSYMPEVLKR+SLARQIDKI+RKDSQEKAK+TWFERNAELVELVVDNDDSEDERANNHKQ
Sbjct: 661 NSYMPEVLKRMSLARQIDKIMRKDSQEKAKRTWFERNAELVELVVDNDDSEDERANNHKQ 720

Query: 721 KKFGSMQLKKLQEELGKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG 780
           KKFGSMQLKKLQEEL KLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG
Sbjct: 721 KKFGSMQLKKLQEELDKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG 780

Query: 781 DNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR 840
           DNKRRKLAAIGQDL EPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR
Sbjct: 781 DNKRRKLAAIGQDLMEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR 840

Query: 841 RNKRKQMKGKI 851
           RNKRKQMKGKI
Sbjct: 841 RNKRKQMKGKI 851

[Close]

BLAST of Cp4.1LG17g02190 vs. ExPASy TrEMBL
Match: A0A6J1HMW3 (DEAD-box ATP-dependent RNA helicase 13 OS=Cucurbita moschata OX=3662 GN=LOC111464380 PE=4 SV=1)

HSP 1 Score: 1560 bits (4038), Expect = 0.0
Identity = 841/851 (98.82%), Postives = 843/851 (99.06%), Query Frame = 0


Query: 1   MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS 60
           MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS
Sbjct: 1   MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS 60

Query: 61  LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDN 120
           LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDN
Sbjct: 61  LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDN 120

Query: 121 MNMETNKKGKKEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSDRIETEVGDEMDGGDD 180
           M+METNKKGKKEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSD IETEVGDEMDGGDD
Sbjct: 121 MSMETNKKGKKEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSDGIETEVGDEMDGGDD 180

Query: 181 LEMEKKLQKKKKGTKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKE 240
           LEMEKKLQKKKKGTKDHGIDKEIKDEVEK AVDETEYYAWNELRLHPLLMKSIYKLGFKE
Sbjct: 181 LEMEKKLQKKKKGTKDHGIDKEIKDEVEKVAVDETEYYAWNELRLHPLLMKSIYKLGFKE 240

Query: 241 PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGADAG 300
           PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEG DAG
Sbjct: 241 PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGVDAG 300

Query: 301 RYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI 360
           RYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI
Sbjct: 301 RYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI 360

Query: 361 VVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPVANCSTE 420
           VVGTPGRLWELMSGGE+HLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLP ANCSTE
Sbjct: 361 VVGTPGRLWELMSGGEKHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPAANCSTE 420

Query: 421 NSQNAENSSTSPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEAL 480
           N QNAENS T PSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEAL
Sbjct: 421 NPQNAENSLTIPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEAL 480

Query: 481 SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI 540
           SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI
Sbjct: 481 SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI 540

Query: 541 AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR 600
           AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR
Sbjct: 541 AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR 600

Query: 601 TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD 660
           TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD
Sbjct: 601 TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD 660

Query: 661 NSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNHKQ 720
           NSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNHKQ
Sbjct: 661 NSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNHKQ 720

Query: 721 KKFGSMQLKKLQEELGKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG 780
           KKFGSMQLKKLQEEL KLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG
Sbjct: 721 KKFGSMQLKKLQEELDKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG 780

Query: 781 DNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR 840
           DNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR
Sbjct: 781 DNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR 840

Query: 841 RNKRKQMKGKI 851
           RNKRKQMKGKI
Sbjct: 841 RNKRKQMKGKI 851

[Close]

BLAST of Cp4.1LG17g02190 vs. ExPASy TrEMBL
Match: A0A6J1KIE8 (DEAD-box ATP-dependent RNA helicase 13 OS=Cucurbita maxima OX=3661 GN=LOC111494724 PE=4 SV=1)

HSP 1 Score: 1548 bits (4009), Expect = 0.0
Identity = 834/851 (98.00%), Postives = 840/851 (98.71%), Query Frame = 0


Query: 1   MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS 60
           MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS
Sbjct: 1   MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS 60

Query: 61  LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDN 120
           LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDN
Sbjct: 61  LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDN 120

Query: 121 MNMETNKKGKKEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSDRIETEVGDEMDGGDD 180
           MNMETNKKGKKEKKKKKKKKKNKVNNEAPTSEEDV E IGGSD D IETEVGDE+DGGDD
Sbjct: 121 MNMETNKKGKKEKKKKKKKKKNKVNNEAPTSEEDVGEIIGGSDGDGIETEVGDELDGGDD 180

Query: 181 LEMEKKLQKKKKGTKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKE 240
           LEMEKKLQK+KK TKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKE
Sbjct: 181 LEMEKKLQKEKKETKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKE 240

Query: 241 PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGADAG 300
           PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEG DAG
Sbjct: 241 PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGVDAG 300

Query: 301 RYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI 360
           RYA RSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI
Sbjct: 301 RYARRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI 360

Query: 361 VVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPVANCSTE 420
           VVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLP ANCSTE
Sbjct: 361 VVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPAANCSTE 420

Query: 421 NSQNAENSSTSPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEAL 480
           NSQNAENSST PSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQ+GGMDGLNSIEAL
Sbjct: 421 NSQNAENSSTIPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQAGGMDGLNSIEAL 480

Query: 481 SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI 540
           SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI
Sbjct: 481 SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI 540

Query: 541 AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR 600
           AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR
Sbjct: 541 AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR 600

Query: 601 TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD 660
           TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD
Sbjct: 601 TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD 660

Query: 661 NSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNHKQ 720
           NSYMPEVLKR+SLARQIDKI+RKDSQEKAK+TWFERNAELVELVVDNDDSEDERANNHKQ
Sbjct: 661 NSYMPEVLKRMSLARQIDKIMRKDSQEKAKRTWFERNAELVELVVDNDDSEDERANNHKQ 720

Query: 721 KKFGSMQLKKLQEELGKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG 780
           KKFGSMQLKKLQEEL KLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG
Sbjct: 721 KKFGSMQLKKLQEELDKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG 780

Query: 781 DNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR 840
           DNKRRKLAAIGQDL EPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR
Sbjct: 781 DNKRRKLAAIGQDLMEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR 840

Query: 841 RNKRKQMKGKI 851
           RNKRKQMKGKI
Sbjct: 841 RNKRKQMKGKI 851

[Close]

BLAST of Cp4.1LG17g02190 vs. ExPASy TrEMBL
Match: A0A6J1C9R6 (DEAD-box ATP-dependent RNA helicase 13 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009620 PE=4 SV=1)

HSP 1 Score: 1300 bits (3363), Expect = 0.0
Identity = 720/853 (84.41%), Postives = 763/853 (89.45%), Query Frame = 0


Query: 6   MQSISSQ---KRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLSLE 65
           M+S+SSQ   KRRPKRKR QKDPEL+RLDSL W SSIP DD LSAFIGSN+LEGGFLSLE
Sbjct: 1   MESMSSQMLQKRRPKRKRTQKDPELERLDSLKWNSSIPSDDPLSAFIGSNELEGGFLSLE 60

Query: 66  EIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDNMN 125
           EIDEAEYGL IP+PETVKQK  S A K  +K E DN   CG ASGDG+ S  KE      
Sbjct: 61  EIDEAEYGLAIPEPETVKQKSISKAGKNLRKDEHDNAGSCGDASGDGDDSSKKE------ 120

Query: 126 METNKKGKKEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSDRIETEVGDEMDGGDDLE 185
           ME  K GKK KK+KK+KKK KV NE PT EE VAE+IGGSDSD  ETEVGDEMD GD LE
Sbjct: 121 MENTKTGKKGKKEKKRKKKKKVINETPTGEEFVAEDIGGSDSDGTETEVGDEMDDGDHLE 180

Query: 186 MEKKLQKKKKGT----KDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGF 245
            +KK QKKKK      ++   DKEIKDEVE DAVDE EYYAWNELRLHPLLMKSIYK GF
Sbjct: 181 TQKKQQKKKKKRTMEIEESVTDKEIKDEVENDAVDEAEYYAWNELRLHPLLMKSIYKHGF 240

Query: 246 KEPTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGAD 305
           KEPT IQ+ACIPAAA+QGKDVVGAAETGSGKTLAFGLPILQR LDE+EKSGK SEE+G D
Sbjct: 241 KEPTPIQRACIPAAAFQGKDVVGAAETGSGKTLAFGLPILQRFLDEQEKSGKMSEEKGVD 300

Query: 306 AGRYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRP 365
             RY+PRSLLRALIITPTRELA+QVTDHLKAV VGT+IRVVPIVGGMSTEKQERLLRMRP
Sbjct: 301 EKRYSPRSLLRALIITPTRELALQVTDHLKAVVVGTDIRVVPIVGGMSTEKQERLLRMRP 360

Query: 366 EIVVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPVANCS 425
           EIVVGTPGRLWELMSGGERHLVELQ LSFFVLDEADRMIENGHFRELQSIIDMLP  N S
Sbjct: 361 EIVVGTPGRLWELMSGGERHLVELQALSFFVLDEADRMIENGHFRELQSIIDMLPGTNGS 420

Query: 426 TENSQNAENSSTSPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIE 485
           TENSQNAENSS +PSSQ KKRQTLVFSATLSLSSDFRKKLKRGS+RP+QSG MDGLNSIE
Sbjct: 421 TENSQNAENSSAAPSSQTKKRQTLVFSATLSLSSDFRKKLKRGSTRPNQSG-MDGLNSIE 480

Query: 486 ALSERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCT 545
           ALSER+G+RPNVAIINLT+TSVLANNLEESFIECREEDKDAYLYYILSVYG+GRTIVFCT
Sbjct: 481 ALSERSGMRPNVAIINLTSTSVLANNLEESFIECREEDKDAYLYYILSVYGQGRTIVFCT 540

Query: 546 SIAALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPG 605
           SIAALRHI+ALL IVG+NV TLHAQ QQRARLKA+DRFRG ENGILIATDVAARGLDIPG
Sbjct: 541 SIAALRHIAALLRIVGVNVWTLHAQMQQRARLKAMDRFRGSENGILIATDVAARGLDIPG 600

Query: 606 VRTVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFP 665
           VRTVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSA ETSKFA+LCKSFSKESFQRFP
Sbjct: 601 VRTVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSARETSKFASLCKSFSKESFQRFP 660

Query: 666 VDNSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNH 725
           +D+SYMPEVLKRLSLARQIDKILRKDSQEKA KTWFERNAE V LVVDN+DSE+ERANN 
Sbjct: 661 IDSSYMPEVLKRLSLARQIDKILRKDSQEKATKTWFERNAESVGLVVDNNDSEEERANNF 720

Query: 726 KQKKFGSMQLKKLQEELGKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQN 785
           K KK GS QL+KLQ+EL KLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEE+VKQ GTVQ+
Sbjct: 721 KLKKVGSTQLRKLQQELNKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEELVKQKGTVQD 780

Query: 786 TGDNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRD 845
            GDNKRRKL  IGQDL EPLQALRTGGQQVHMDAKEMADKR+KVE+ +RKKKEEKKRLRD
Sbjct: 781 MGDNKRRKLGVIGQDLIEPLQALRTGGQQVHMDAKEMADKRRKVESSKRKKKEEKKRLRD 840

Query: 846 QRRNKRKQMKGKI 851
           QRRN+RKQMKGKI
Sbjct: 841 QRRNRRKQMKGKI 846

[Close]

BLAST of Cp4.1LG17g02190 vs. ExPASy TrEMBL
Match: A0A6J1CB51 (DEAD-box ATP-dependent RNA helicase 13 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009620 PE=4 SV=1)

HSP 1 Score: 1294 bits (3349), Expect = 0.0
Identity = 719/852 (84.39%), Postives = 763/852 (89.55%), Query Frame = 0


Query: 6   MQSISSQ---KRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLSLE 65
           M+S+SSQ   KRRPKRKR QKDPEL+RLDSL W SSIP DD LSAFIGSN+LEGGFLSLE
Sbjct: 1   MESMSSQMLQKRRPKRKRTQKDPELERLDSLKWNSSIPSDDPLSAFIGSNELEGGFLSLE 60

Query: 66  EIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDNMN 125
           EIDEAEYGL IP+PETVKQK  S A K  +K E DN   CG ASGDG+ S  KE      
Sbjct: 61  EIDEAEYGLAIPEPETVKQKSISKAGKNLRKDEHDNAGSCGDASGDGDDSSKKE------ 120

Query: 126 METNKKGKKEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSDRIETEVGDEMDGGDDLE 185
           ME  K GKK KK+KK+KKK KV NE PT EE VAE+IGGSDSD  ETEVGDEMD GD LE
Sbjct: 121 MENTKTGKKGKKEKKRKKKKKVINETPTGEEFVAEDIGGSDSDGTETEVGDEMDDGDHLE 180

Query: 186 MEKKLQKKKKGTKDHGIDK---EIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFK 245
            +KK QKKKK  +   I++   EIKDEVE DAVDE EYYAWNELRLHPLLMKSIYK GFK
Sbjct: 181 TQKKQQKKKK-KRTMEIEESVTEIKDEVENDAVDEAEYYAWNELRLHPLLMKSIYKHGFK 240

Query: 246 EPTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGADA 305
           EPT IQ+ACIPAAA+QGKDVVGAAETGSGKTLAFGLPILQR LDE+EKSGK SEE+G D 
Sbjct: 241 EPTPIQRACIPAAAFQGKDVVGAAETGSGKTLAFGLPILQRFLDEQEKSGKMSEEKGVDE 300

Query: 306 GRYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPE 365
            RY+PRSLLRALIITPTRELA+QVTDHLKAV VGT+IRVVPIVGGMSTEKQERLLRMRPE
Sbjct: 301 KRYSPRSLLRALIITPTRELALQVTDHLKAVVVGTDIRVVPIVGGMSTEKQERLLRMRPE 360

Query: 366 IVVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPVANCST 425
           IVVGTPGRLWELMSGGERHLVELQ LSFFVLDEADRMIENGHFRELQSIIDMLP  N ST
Sbjct: 361 IVVGTPGRLWELMSGGERHLVELQALSFFVLDEADRMIENGHFRELQSIIDMLPGTNGST 420

Query: 426 ENSQNAENSSTSPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEA 485
           ENSQNAENSS +PSSQ KKRQTLVFSATLSLSSDFRKKLKRGS+RP+QSG MDGLNSIEA
Sbjct: 421 ENSQNAENSSAAPSSQTKKRQTLVFSATLSLSSDFRKKLKRGSTRPNQSG-MDGLNSIEA 480

Query: 486 LSERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTS 545
           LSER+G+RPNVAIINLT+TSVLANNLEESFIECREEDKDAYLYYILSVYG+GRTIVFCTS
Sbjct: 481 LSERSGMRPNVAIINLTSTSVLANNLEESFIECREEDKDAYLYYILSVYGQGRTIVFCTS 540

Query: 546 IAALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGV 605
           IAALRHI+ALL IVG+NV TLHAQ QQRARLKA+DRFRG ENGILIATDVAARGLDIPGV
Sbjct: 541 IAALRHIAALLRIVGVNVWTLHAQMQQRARLKAMDRFRGSENGILIATDVAARGLDIPGV 600

Query: 606 RTVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPV 665
           RTVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSA ETSKFA+LCKSFSKESFQRFP+
Sbjct: 601 RTVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSARETSKFASLCKSFSKESFQRFPI 660

Query: 666 DNSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDERANNHK 725
           D+SYMPEVLKRLSLARQIDKILRKDSQEKA KTWFERNAE V LVVDN+DSE+ERANN K
Sbjct: 661 DSSYMPEVLKRLSLARQIDKILRKDSQEKATKTWFERNAESVGLVVDNNDSEEERANNFK 720

Query: 726 QKKFGSMQLKKLQEELGKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNT 785
            KK GS QL+KLQ+EL KLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEE+VKQ GTVQ+ 
Sbjct: 721 LKKVGSTQLRKLQQELNKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEELVKQKGTVQDM 780

Query: 786 GDNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQ 845
           GDNKRRKL  IGQDL EPLQALRTGGQQVHMDAKEMADKR+KVE+ +RKKKEEKKRLRDQ
Sbjct: 781 GDNKRRKLGVIGQDLIEPLQALRTGGQQVHMDAKEMADKRRKVESSKRKKKEEKKRLRDQ 840

Query: 846 RRNKRKQMKGKI 851
           RRN+RKQMKGKI
Sbjct: 841 RRNRRKQMKGKI 844

[Close]

BLAST of Cp4.1LG17g02190 vs. ExPASy TrEMBL
Match: A0A1S4E2Y3 (DEAD-box ATP-dependent RNA helicase 13 OS=Cucumis melo OX=3656 GN=LOC103499499 PE=3 SV=1)

HSP 1 Score: 1147 bits (2967), Expect = 0.0
Identity = 611/677 (90.25%), Postives = 645/677 (95.27%), Query Frame = 0


Query: 175 MDGGDDLEMEKKLQKKKKGTKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIY 234
           MD GD LE E K QKK+K  K+HG DKEI+DEVEKDAVDETEYYAWNELRLHPLLMKSIY
Sbjct: 1   MDDGDHLETESKQQKKEKEMKNHGTDKEIRDEVEKDAVDETEYYAWNELRLHPLLMKSIY 60

Query: 235 KLGFKEPTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEE 294
           KLGFKEPTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQR LDEREKSGK SEE
Sbjct: 61  KLGFKEPTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRFLDEREKSGKMSEE 120

Query: 295 EGADAGRYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLL 354
           +G DA +YAP+SLLRALIITPTRELA+QVTDHLKAVAVG +IRVVPIVGGMSTEKQERLL
Sbjct: 121 KGLDAKKYAPKSLLRALIITPTRELALQVTDHLKAVAVGIDIRVVPIVGGMSTEKQERLL 180

Query: 355 RMRPEIVVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPV 414
           RMRPE+VVGTPGRLWELMSGGE+HLVEL+ LSFFVLDEADRMIENGHFRELQSIIDMLPV
Sbjct: 181 RMRPEVVVGTPGRLWELMSGGEKHLVELEALSFFVLDEADRMIENGHFRELQSIIDMLPV 240

Query: 415 ANCSTENSQNAENSSTSPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGL 474
            N S EN QN ENS T+PSSQRKKRQTLVFSATLSLSSDFRKKLKRGSS+P+QSG MDGL
Sbjct: 241 TNGSAENLQNTENSLTTPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSKPNQSG-MDGL 300

Query: 475 NSIEALSERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTI 534
           NSIEALSERAGIRPNVA+INLTNTSVLANNLEESFIECREEDKDAYLYYILSVYG+GRTI
Sbjct: 301 NSIEALSERAGIRPNVAVINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGQGRTI 360

Query: 535 VFCTSIAALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGL 594
           VFCTSIAALRHI+ALL IVG+NVLTLHAQRQQRARLKAIDRFRG +NGILIATDVAARGL
Sbjct: 361 VFCTSIAALRHIAALLSIVGVNVLTLHAQRQQRARLKAIDRFRGSQNGILIATDVAARGL 420

Query: 595 DIPGVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESF 654
           DIPGVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFA+LCKSFSKESF
Sbjct: 421 DIPGVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFASLCKSFSKESF 480

Query: 655 QRFPVDNSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDNDDSEDER 714
           QRFPVDNSYMPEVLKRLSLARQIDKI+RK+SQEKA KTWFERNAELVELVVDNDDSE+ER
Sbjct: 481 QRFPVDNSYMPEVLKRLSLARQIDKIVRKESQEKASKTWFERNAELVELVVDNDDSEEER 540

Query: 715 ANNHKQKKFGSMQLKKLQEELGKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNG 774
           ANN+KQKK G +QLKKLQ+EL KLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEE+ KQN 
Sbjct: 541 ANNYKQKKVGCIQLKKLQQELDKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEELAKQNA 600

Query: 775 TVQNTGDNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKK 834
           +VQ  GDNKRRKLAA GQDLTEPLQALRTGGQQVHM+AKEMA+KR+K+EN+RRKKKEEKK
Sbjct: 601 SVQTMGDNKRRKLAAFGQDLTEPLQALRTGGQQVHMNAKEMAEKRRKMENVRRKKKEEKK 660

Query: 835 RLRDQRRNKRKQMKGKI 851
           RLRDQRRNKRKQMKG+I
Sbjct: 661 RLRDQRRNKRKQMKGRI 676

[Close]

BLAST of Cp4.1LG17g02190 vs. TAIR 10
Match: AT3G16840.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 806.6 bits (2082), Expect = 1.9e-233
Identity = 478/862 (55.45%), Postives = 614/862 (71.23%), Query Frame = 0


Query: 1   MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIP--RDDA----LSAFIGSNDL 60
           M     +S   +KR  +  + +++ + +R+DSL W SSIP   DD      + F GS  L
Sbjct: 1   MVTGDKESSLMKKRNKRSHKRKREEDFERIDSLPWSSSIPIGEDDEGESFSTLFSGSGQL 60

Query: 61  EGGFLSLEEIDEAEYGLTIP--KPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGS 120
           +GGFLSLEEIDEA+Y LT+P  + E  ++K +      + +   + ++G   A  DGEG 
Sbjct: 61  DGGFLSLEEIDEADYHLTLPTIESEITERKQSPEDDDDTNETVDEMIEG-EEAEEDGEGR 120

Query: 121 MNKEEGDNMNMETNKKGK----KEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSDRIE 180
            ++++ D+      K+ K    KEKKK+KKKKK K  NEA  +++  A +  G D+    
Sbjct: 121 DDEDDEDDEETRKKKEKKAKRNKEKKKEKKKKKQKKINEAAKNQDASAVSCDGDDT---- 180

Query: 181 TEVGDEMDGGDDLEMEKKLQKKKKGTKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPL 240
                                             ++++VE++ +   E+ AW+ +RLHPL
Sbjct: 181 ----------------------------------VEEQVEEEEI-PPEFSAWSSMRLHPL 240

Query: 241 LMKSIYKLGFKEPTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKS 300
           LMKSIY+L FKEPT IQKAC   AAYQGKDV+GAAETGSGKTLAFGLPILQRLLDEREK 
Sbjct: 241 LMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKV 300

Query: 301 GKKSEEEGADAGRYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTE 360
           GK    +G +A +YA    LRALIITPTRELA+QVT+HL+  A   +++VVPIVGGM +E
Sbjct: 301 GKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSE 360

Query: 361 KQERLLRMRPEIVVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSI 420
           KQER L+ +PEIVV TPGRLWELMS GE+HLVEL +LSFFVLDEADRM+E GHFRELQSI
Sbjct: 361 KQERRLKEKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSI 420

Query: 421 IDMLPVANCSTE-NSQNAENSSTSPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQ 480
           +D+LPV +   E  +Q  +++ T  +  +KKRQT VFSAT++LSSDFRKKLKRGSS+  Q
Sbjct: 421 LDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQ 480

Query: 481 SGGMDGLNSIEALSERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSV 540
           S   + +NSIE LSERAG+R NVAII+LT TS+LA  +EESFI+C E++KDAYLYYILSV
Sbjct: 481 SSSGE-VNSIEVLSERAGMRDNVAIIDLTTTSILAPKIEESFIKCEEKEKDAYLYYILSV 540

Query: 541 YGKGRTIVFCTSIAALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIAT 600
           +G+GRTIVFCTS+  LRHIS LL I+G++V TL ++ +QRARLK+IDRFR  ENGILIAT
Sbjct: 541 HGQGRTIVFCTSVTDLRHISGLLKILGLDVCTLFSEMKQRARLKSIDRFRASENGILIAT 600

Query: 601 DVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCK 660
           D+ ARG+DI  VRT++HY+LPHSAEVYVHR GRTARA ADGCSIAL+  NETSKF TLCK
Sbjct: 601 DLVARGIDIKNVRTIIHYKLPHSAEVYVHRCGRTARAFADGCSIALIEPNETSKFYTLCK 660

Query: 661 SFSKESFQRFPVDNSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERNAELVELVVDN 720
           SFS ES + FP+DNSYMP V KRL LARQI +I RK S+E A +TW +++AE +EL +D+
Sbjct: 661 SFSMESVKIFPLDNSYMPAVRKRLYLARQIYEIERKGSRENADRTWLKKHAESMELELDD 720

Query: 721 DDSEDERANNHKQKKFGSMQLKKLQEELGKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFE 780
           ++SE+ER +N +Q+K  S +L KL+EEL  LLSHP+QPK FS RY AG GVS L+Q+QF 
Sbjct: 721 EESEEERVDNVRQRKATSARLNKLKEELSTLLSHPMQPKKFSGRYFAGVGVSTLMQNQFV 780

Query: 781 EMVKQ-NGTVQNTGDNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLR 840
           E+ KQ    +Q  GD KRRKL  I Q+  EPLQALR GG ++     + A+KR+ + +L+
Sbjct: 781 ELKKQKQAQMQIGGDIKRRKLVVINQNCIEPLQALRAGGNEMLKMKGQSAEKRRDIASLK 821

Query: 841 RKKKEEKKRLRDQRRNKRKQMK 849
           +K+KEEK   RDQRRN++KQ K
Sbjct: 841 KKRKEEKIGRRDQRRNQKKQRK 821

[Close]

BLAST of Cp4.1LG17g02190 vs. TAIR 10
Match: AT5G60990.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 215.7 bits (548), Expect = 1.4e-55
Identity = 154/505 (30.50%), Postives = 259/505 (51.29%), Query Frame = 0


Query: 222 ELRLHPLLMKSIYKLGFKEPTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRL 281
           EL +   L+K+  +LG+K P+ IQ   +P  A +GKDV+G A+TGSGKT AF +PILQ L
Sbjct: 13  ELGVREELVKACERLGWKNPSKIQAEALP-FALEGKDVIGLAQTGSGKTGAFAIPILQAL 72

Query: 282 L----DEREKSGKKSEEEGADAGRYAPRSLLRALIITPTRELAIQVTDHLKAVAVGTNIR 341
           L    D   K G++            P     A +++PTRELAIQ+ +  +A+    ++R
Sbjct: 73  LEYVYDSEPKKGRR------------PDPAFFACVLSPTRELAIQIAEQFEALGADISLR 132

Query: 342 VVPIVGGMSTEKQERLLRMRPEIVVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMI 401
              +VGG+   +Q   L  RP ++V TPGRLW+ MS  +     L++L + VLDEADR++
Sbjct: 133 CAVLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMS--DTKGFSLKSLKYLVLDEADRLL 192

Query: 402 ENGHFRELQSIIDMLPVANCSTENSQNAENSSTSPSSQRKKRQTLVFSATLSLSSDFRKK 461
                + L  I++ +P+                       +R+T +FSAT++      KK
Sbjct: 193 NEDFEKSLNQILEEIPL-----------------------ERKTFLFSATMT------KK 252

Query: 462 LKRGSSRPSQSGGMDGLNSIEALSERAGIRPNVAIINLTNTSVLANNLEESFIECREEDK 521
           +++                     +RA +R  V I   +  S + + L++ +     + K
Sbjct: 253 VRK--------------------LQRACLRNPVKIEAASKYSTV-DTLKQQYRFVAAKYK 312

Query: 522 DAYLYYILSVYGKGRTIVFCTSIAALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFR 581
           D YL YILS   +  +++F  +    R ++ +L  +G   + +  Q  Q  RL A+++F+
Sbjct: 313 DCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFK 372

Query: 582 GRENGILIATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSAN 641
             E  IL+ TDVA+RGLDIP V  V++Y +P +++ Y+HR GRTARA   G  I+LV+  
Sbjct: 373 AGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQY 432

Query: 642 ETSKFATLCKSFSKESFQRFPVDNSYMPEVLKRLSLARQIDKILRKDSQEKAKKTWFERN 701
           E   +  + K   K+    +P +   +  +L+R++ A+++  +  K+S  + ++   E +
Sbjct: 433 ELEWYIQIEKLIGKK-LPEYPAEEDEVLSLLERVAEAKKLSAMNMKESGGRKRRG--EDD 449

Query: 702 AELVELVVDNDDSEDERANNHKQKK 723
            E    +  N D  ++    +K KK
Sbjct: 493 EESERFLGGNKDRGNKERGGNKDKK 449

[Close]

BLAST of Cp4.1LG17g02190 vs. TAIR 10
Match: AT1G16280.1 (RNA helicase 36 )

HSP 1 Score: 188.3 bits (477), Expect = 2.5e-47
Identity = 146/491 (29.74%), Postives = 236/491 (48.07%), Query Frame = 0


Query: 213 DETEYYAWNELRLHPLLMKSIYKLGFKEPTAIQKACIPAAAYQGKDVVGAAETGSGKTLA 272
           D T    +  L L    +++  +LG ++PT +Q  C+P     G+DV+G A+TGSGKT A
Sbjct: 53  DTTSATNFEGLGLAEWAVETCKELGMRKPTPVQTHCVP-KILAGRDVLGLAQTGSGKTAA 112

Query: 273 FGLPILQRLLDEREKSGKKSEEEGADAGRYAPRSLLRALIITPTRELAIQVTDHLKAVAV 332
           F LPIL RL ++                   P  +  AL++TPTRELA Q+ +  KA+  
Sbjct: 113 FALPILHRLAED-------------------PYGVF-ALVVTPTRELAFQLAEQFKALGS 172

Query: 333 GTNIRVVPIVGGMSTEKQERLLRMRPEIVVGTPGRLWELMSGGERHLVELQTLSFFVLDE 392
             N+R   IVGGM    Q   L  RP IV+ TPGR+  L+              F VLDE
Sbjct: 173 CLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDE 232

Query: 393 ADRMIENGHFRELQSIIDMLPVANCSTENSQNAENSSTSPSSQRKKRQTLVFSATLSLSS 452
           ADR+++ G   EL++I   LP                       K RQTL+FSAT  ++S
Sbjct: 233 ADRVLDVGFQDELRTIFQCLP-----------------------KSRQTLLFSAT--MTS 292

Query: 453 DFRKKLKRGSSRPSQSGGMDGLNSIEALSERAGIRPNVAIINLTNTSVLANNLEESFIEC 512
           + +  L+  S++       +GL +++ L+++                         FI  
Sbjct: 293 NLQALLEHSSNKAYFYEAYEGLKTVDTLTQQ-------------------------FIFE 352

Query: 513 REEDKDAYLYYILSVY---GKGRTIVFCTSIAALRHISALLCIVGINVLTLHAQRQQRAR 572
            ++ K+ YL +ILS     G    ++F ++    + +S +L  + +  + +H+   Q  R
Sbjct: 353 DKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMR 412

Query: 573 LKAIDRFRGRENGILIATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASADGC 632
           L A+ +F+  +  IL+ATDVA+RGLDIP V  V++Y +P     YVHR GRTARA   G 
Sbjct: 413 LSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGL 472

Query: 633 SIALVSANETSKFATLCKSFSK--ESFQRFPVDNSY---MPEVLKRLSLARQIDKILR-- 692
           ++++++  +      + +   K  E + +  + +S         KR+++ + +D      
Sbjct: 473 AVSIITETDVKLIHKIEEEVGKKMEPYNKKVITDSLEVTKVSKAKRVAMMKMLDNGFEDK 472

[Close]

BLAST of Cp4.1LG17g02190 vs. TAIR 10
Match: AT2G33730.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 170.6 bits (431), Expect = 5.3e-42
Identity = 156/549 (28.42%), Postives = 254/549 (46.27%), Query Frame = 0


Query: 130 KKEKKKKKKKKKNKVNNEAPTSEEDVAENIGGSDSDRIETEVGDEMDGGDDLEMEKKLQK 189
           ++E+KK+  K + ++ +E    ++ + E    + + R+  E  D  D   D+ +++    
Sbjct: 224 RREQKKQAAKHEKEMRDEI-RKKDGIVEKPEEAAAQRVREEAADTYD-SFDMRVDRHWSD 283

Query: 190 KK---KGTKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKEPTAIQK 249
           K+      +D  I +E  +   K +       +W E +L   L+K++ + G+K+P+ IQ 
Sbjct: 284 KRLEEMTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQM 343

Query: 250 ACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGADAGRYAPRS 309
           A IP    Q +DV+G AETGSGKT AF LP+L   +       +++E EG          
Sbjct: 344 AAIPLGLQQ-RDVIGIAETGSGKTAAFVLPML-AYISRLPPMSEENETEGP--------- 403

Query: 310 LLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEIVVGTPG 369
              A+++ PTRELA Q+ +     A     RV  IVGG S E+Q   +    EIV+ TPG
Sbjct: 404 --YAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPG 463

Query: 370 RLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPVANCSTENSQNAE 429
           RL + +   ER    L   ++ VLDEADRMI+ G   ++  ++D +P +N   EN +   
Sbjct: 464 RLIDCL---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEE-- 523

Query: 430 NSSTSPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEALSERAGI 489
                   ++  R T +FSAT+                            +E L+ +   
Sbjct: 524 ----ELDEKKIYRTTYMFSATMP-------------------------PGVERLARK--Y 583

Query: 490 RPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSIAALRHI 549
             N  ++ +       + + +  I  +E +K   L  +L   G+   IVF  +      I
Sbjct: 584 LRNPVVVTIGTAGKTTDLISQHVIMMKESEKFFRLQKLLDELGEKTAIVFVNTKKNCDSI 643

Query: 550 SALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVRTVVHYQ 609
           +  L   G  V TLH  + Q  R  +++ FR +   +L+ATDV  RG+DIP V  V++Y 
Sbjct: 644 AKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYD 703

Query: 610 LPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVDNSYMPE 669
           +P   E+Y HR GRT RA   G + + ++ ++T  F  L         Q     NS +P 
Sbjct: 704 MPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDL--------KQMLVQSNSAVPP 713

Query: 670 VLKRLSLAR 676
            L R   +R
Sbjct: 764 ELARHEASR 713

[Close]

BLAST of Cp4.1LG17g02190 vs. TAIR 10
Match: AT4G16630.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 166.8 bits (421), Expect = 7.7e-41
Identity = 214/795 (26.92%), Postives = 352/795 (44.28%), Query Frame = 0


Query: 92  KKGEQDNVDGCGGASGDGEGSMNKEEGDNMNMETNKKGKKEKKKKK----KKKKNKVNNE 151
           K+GE +  +    A  D +G    EE D+   E ++K K++   +         + V  E
Sbjct: 30  KEGEAEEHE----AGEDEDGEEEYEEEDDDEEEEDEKRKRDADAQSPWDFASYSSSVGEE 89

Query: 152 -APTSEEDVAENIGGSDSDR-----IETEVGDEMDGGDDLEMEKKLQKKKKGTKDHGIDK 211
            A      + E I  +   R     I  E  +E +  D  + E   Q++     D   + 
Sbjct: 90  HARRHTTSIDEKISKAIQHRPVPISINEEEEEEEEEEDASDAETDKQEEYLSEDDEAAEY 149

Query: 212 EIKDEVEK---DAVDETEYYA--WNELRLHPLLMKSIYKLGFKEPTAIQKACIPAAAYQG 271
           + +D   K     VD   ++A  + EL L   L+++   LG+K+PT IQ ACIP  A  G
Sbjct: 150 KPEDATPKPFFSTVDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIP-LALTG 209

Query: 272 KDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGADAGRYAPRSLL--RALIIT 331
           +D+  +A TGSGKT AF LP L+RLL                   + P+ +   R LI+T
Sbjct: 210 RDLCASAITGSGKTAAFALPTLERLL-------------------FRPKRVFATRVLILT 269

Query: 332 PTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEIVVGTPGRLWELMSG 391
           PTRELA+Q+   ++ +A  T+I+   IVGG+S  +QE +LR  P+IVV TPGR+ + +  
Sbjct: 270 PTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRN 329

Query: 392 GERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPVANCSTENSQNAENSSTSPSS 451
                V+L  L+  +LDEADR+++ G   E+  ++ + P                     
Sbjct: 330 SMS--VDLDDLAVLILDEADRLLQTGFATEITELVRLCP--------------------- 389

Query: 452 QRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQSGGMDGLNSIEALSERAGIRPNVAIIN 511
             K+RQT++FSAT  ++ + ++ +K   ++P +      L++  +     G+   V  I 
Sbjct: 390 --KRRQTMLFSAT--MTEEVKELVKLSLNKPLR------LSADPSARRPPGLTEEVVRIR 449

Query: 512 LTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSIAALRHISALLCIVG 571
            T                RE +++A L  + +   K + I+F  +  A   +  L  + G
Sbjct: 450 RT----------------REANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKILFGLAG 509

Query: 572 INVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVRTVVHYQLPHSAEVY 631
           +    LH    Q  RL +++ FR +E   LIATDVAARGLDI GV+TV++Y  P   + Y
Sbjct: 510 LKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSY 569

Query: 632 VHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVDNSY---------MP 691
           VHR GRTARA  +G ++  V+ ++ S    + K    +   R   + S          M 
Sbjct: 570 VHRVGRTARAGREGYAVTFVTDSDRSLLKVIAKKVGSKLKSRVIPEQSIVKWSQIIDEME 629

Query: 692 EVLKRLSLARQIDKILRKDSQE----------------KAKKTWFERNAELVELVVDNDD 751
           +    +  A + ++ LRK   E                + K+TWF    E   +     D
Sbjct: 630 DQYSAVISAERDERALRKAEMEFAKAENMLEHRDEIYARPKRTWFMTEKEKKLVAQAEKD 689

Query: 752 SEDERANNHKQKKFGSMQLKKLQEELGKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEM 811
           S    A         +  L K++E+  +     L  K    R L  A      +   E+ 
Sbjct: 690 SAGNPAGGELVSADRAEDL-KMKEKRKREREKNLPRK--KRRKLEAA------REMLEDN 742

Query: 812 VKQNGTVQNTGDNKRRKLAAIGQDLTEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKK 844
             +       GD KR +     +   E  +   T     +M AK +  K++ +++ + ++
Sbjct: 750 EGEEEEEDEEGDEKRGRSRGKDKKKQETDKKGLTLKDLGYMRAKAVKAKQRAIDSGKMER 742

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g02190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93Y39	2.7e-232	55.45	DEAD-box ATP-dependent RNA helicase 13 OS=Arabidopsis thaliana OX=3702 GN=RH13 P...	[more]
A2XVF7	9.6e-214	53.66	DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]
A3AVH5	9.6e-214	53.66	DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q54TD7	4.5e-102	33.02	ATP-dependent RNA helicase ddx24 OS=Dictyostelium discoideum OX=44689 GN=ddx24 P...	[more]
P0CQ91	3.9e-82	35.93	ATP-dependent RNA helicase MAK5 OS=Cryptococcus neoformans var. neoformans serot...	[more]

BLAST of Cp4.1LG17g02190 vs. NCBI nr


Match Name	Identity	Description
XP_023514560.1	100.00	DEAD-box ATP-dependent RNA helicase 13 [Cucurbita pepo subsp. pepo] >XP_02351456...	[more]
KAG6593806.1	98.82	DEAD-box ATP-dependent RNA helicase 13, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022964342.1	98.82	DEAD-box ATP-dependent RNA helicase 13 [Cucurbita moschata] >XP_022964343.1 DEAD...	[more]
KAG7026140.1	98.71	DEAD-box ATP-dependent RNA helicase 13, partial [Cucurbita argyrosperma subsp. a...	[more]
XP_023000463.1	98.00	DEAD-box ATP-dependent RNA helicase 13 [Cucurbita maxima] >XP_023000464.1 DEAD-b...	[more]

BLAST of Cp4.1LG17g02190 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1HMW3	98.82	DEAD-box ATP-dependent RNA helicase 13 OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1KIE8	98.00	DEAD-box ATP-dependent RNA helicase 13 OS=Cucurbita maxima OX=3661 GN=LOC1114947...	[more]
A0A6J1C9R6	84.41	DEAD-box ATP-dependent RNA helicase 13 isoform X1 OS=Momordica charantia OX=3673...	[more]
A0A6J1CB51	84.39	DEAD-box ATP-dependent RNA helicase 13 isoform X2 OS=Momordica charantia OX=3673...	[more]
A0A1S4E2Y3	90.25	DEAD-box ATP-dependent RNA helicase 13 OS=Cucumis melo OX=3656 GN=LOC103499499 P...	[more]

BLAST of Cp4.1LG17g02190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16840.1	1.9e-233	55.45	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G60990.1	1.4e-55	30.50	DEA(D/H)-box RNA helicase family protein	[more]
AT1G16280.1	2.5e-47	29.74	RNA helicase 36	[more]
AT2G33730.1	5.3e-42	28.42	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT4G16630.1	7.7e-41	26.92	DEA(D/H)-box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 127..147
None	No IPR available	COILS	Coil	Coil	coord: 812..846
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 803..851
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 419..439
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 822..851
None	No IPR available	PANTHER	PTHR24031:SF91	ATP-DEPENDENT RNA HELICASE DDX24	coord: 99..773
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 99..773
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 505..634 e-value: 9.38892E-49 score: 166.529
None	No IPR available	CDD	cd17946	DEADc_DDX24	coord: 229..493 e-value: 3.79594E-113 score: 343.067
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 544..625 e-value: 8.6E-26 score: 101.7
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 516..624 e-value: 7.2E-27 score: 93.9
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 504..672 score: 19.078476
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 237..480 e-value: 1.9E-45 score: 167.0
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 250..466 score: 24.863216
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 242..449 e-value: 2.1E-43 score: 148.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 179..466 e-value: 1.7E-76 score: 258.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 494..738 e-value: 9.2E-44 score: 151.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 309..640
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 131..409
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 389..397
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 218..246 score: 10.856824

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g02190.1	Cp4.1LG17g02190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003724	RNA helicase activity