Cp4.1LG17g01970 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGTTTTGGTGGCTGGTAAATGGGAGTAGCGGGAGGCTGTGGTTTATAAATTGGACTCATCGGAGGTTTGGGTGGTTTGTGAACTGGACGGACGGGAGGTTTTGGTGGTTTGTGAATTGGACCAACTCGAGGTTTCGGTGGTTTGTGAATTGGACTGACTGGAGGGTTGGGTGGTTTGTCAATTGGACCGACTGGAGGCTTGGGTGGCGGTTTGTCAATTGGACCGACTGGAGGCTTGGGAGGTTTGTCAATTGGACTGACTGGAGGCTTGGGTGGTTTGTCTATTGGACCGACGGGAGGCTTTGGTGGTTTGTGAATTGGACCAACTGGAGGCTTGGGAGGTTTGTGAATTGGACCGACTGGAGGCTTGGGAGGTTTGTCAATTGGACCGACTGGAGGCTTGGGAGGTTGGTCTATTGGACCGACGGGAGGCTTTGGTGGTTTGTCAATTGGACCAACGGGAGGCTTGGGAGGTTTGTCAATTGGACCAACTGGAGGTTTTGGTGGTTTGTCAACTGGACCGACTGGAGGCTTGGGTGGTTTGTGAATTGGACTGACTGGAGGCTTGGGAGGTTTGTCTATTGGACCGACTGGAGGCTTGGGTGGTTTGTGAATTGGACCGACGGGAGGCTTTGGTGGTTTATCAATTGGACCAACTGGAGACTTGGGAGGTTTGTCAATTGGACCGACTGGAGGCTTGGGAGGTTTGTCAATTGGACCGACCGGAGGCTTGGGTGGTTTGTGAATTAGACCGACGGGAGGCTTTGGTGGTTTATCAATTGGACCAACTGGAGGCTTGGGAGGTTTGTCAATTGGACCGACTGGAGGCTTGGGTGGTTTGTCTATTGGACCGACTGGAGGCTTTGGTGGTTTATCAATTGGACCAACTGGAGGCTTGGGAGGTTTGTCAATTGGACCGACGGGAGGCTTGGGTGGTTTATCAATTGGACCAACTGGAGACTTGGGAGGTTTGTCAATTGGACCGACTGGAGGCTTGGGAGGTTTGTCAATTGGACCGACCGGAGGCTTGGGTGGTTTGTGAATTGGACCGACGGGAGGCTTTGGTGGTTTATCAATTGGACCAACTGGAGGCTTGGGAGGTTTGTGAATTGGACCGACTGGAGGCTTGGGAGGTTTGTCAATTGAACCGACCGGAGGCTTGGGTGGTTTGTGAATTGGACCGACTGGAGGCTTTGGTGGTTTATCAATTGGACCAACTGGAGGCTTGGGAGGTTTGTCAATTGGACCGACCGGAGGCTTGGGTGGTTTGTGAATTGGATCGACCGGAGGCTTTGGTGATTTGTCAACTGGATCGACTGGAGGCTTAGGTGGTTTGTGTATTGGACCGACCGGAGGCTTTGGTGGTTTGTGGAGTGAAGGCTTTGGTGGTTTGTGAATTGTTACTACCGGAGGCTTAGGTGGTTTGTCAAATGGACCGGGAGGTTTGTATATGGGAACTAGGGGAAGCTTGGGGGGTTCGTAAATTGGAATTGATGGTGGGTTTGGAGGTTGAGTCTCACCGGCGTTATCTCCAACGGCCGGTTTGGTGAGAACCACCGCGAGCAGGCCAAGAAGGAGAGCTAACAGGTAGGAGGAAGTCATTTTTGTGGGTTTGTGATTACCAACTCGAAGGAAATGACACGTATTTAAAGACACAATTATGAGGTAAATTATTCAAAATG ATGGAGGCTTGGGTGGTTTGTCTATTGGACCGACGGGAGGCTTTGGTGGTTTGTGAATTGGACCAACTGGAGGCTTGGGAGGTTTGTGAATTGGACCGACTGGAGGCTTGGGAGGTTTGTCAATTGGACCGACTGGAGGCTTGGGAGGTTGGTCTATTGGACCGACGGGAGGCTTTGGTGGTTTGTCAATTGGACCAACGGGAGGCTTGGGAGGTTTGTCAATTGGACCAACTGGAGGTTTTGGTGGTTTGTCAACTGGACCGACTGGAGGCTTGGGTGGTTTGTGAATTGGACCGACTGGAGGCTTGGGAGGTTTGTCAATTGAACCGACCGGAGGCTTGGGTGGTTTGTGAATTGGACCGACTGGAGGCTTTGGTGGTTTATCAATTGGACCAACTGGAGGCTTGGGAGGTTTGTCAATTGGACCGACCGGAGGCTTGGGTGGTTTGTGAATTGGATCGACCGGAGGCTTTGGTGATTTGTCAACTGGATCGACTGGAGGCTTAGGTGGTTTGTGTATTGGACCGACCGGAGGCTTTGGTGGTTTGTGGAGTGAAGGCTTTGGTGGTTTGTGAATTGTTACTACCGGAGGCTTAGGTGGTTTGTCAAATGGACCGGGAGGTTTGTATATGGGAACTAGGGGAAGCTTGGGGGGTTCGTAAATTGGAATTGATGGTGGGTTTGGAGGTTGAGTCTCACCGGCGTTATCTCCAACGGCCGGTTTGGTGAGAACCACCGCGAGCAGGCCAAGAAGGAGAGCTAACAGGTAGGAGGAAGTCATTTTTGTGGGTTTGTGATTACCAACTCGAAGGAAATGACACGTATTTAAAGACACAATTATGAGGTAAATTATTCAAAATG ATGGAGGCTTGGGTGGTTTGTCTATTGGACCGACGGGAGGCTTTGGTGGTTTGTGAATTGGACCAACTGGAGGCTTGGGAGGTTTGTGAATTGGACCGACTGGAGGCTTGGGAGGTTTGTCAATTGGACCGACTGGAGGCTTGGGAGGTTGGTCTATTGGACCGACGGGAGGCTTTGGTGGTTTGTCAATTGGACCAACGGGAGGCTTGGGAGGTTTGTCAATTGGACCAACTGGAGGTTTTGGTGGTTTGTCAACTGGACCGACTGGAGGCTTGGGTGGTTTGTGAATTGGACCGACTGGAGGCTTGGGAGGTTTGTCAATTGAACCGACCGGAGGCTTGGGTGGTTTGTGAATTGGACCGACTGGAGGCTTTGGTGGTTTATCAATTGGACCAACTGGAGGCTTGGGAGGTTTGTCAATTGGACCGACCGGAGGCTTGGGTGGTTTGTGAATTGGATCGACCGGAGGCTTTGGTGATTTGTCAACTGGATCGACTGGAGGCTTAG MEAWVVCLLDRREALVVCELDQLEAWEVCELDRLEAWEVCQLDRLEAWEVGLLDRREALVVCQLDQREAWEVCQLDQLEVLVVCQLDRLEAWVVCELDRLEAWEVCQLNRPEAWVVCELDRLEALVVYQLDQLEAWEVCQLDRPEAWVVCELDRPEALVICQLDRLEA Homology
BLAST of Cp4.1LG17g01970 vs. NCBI nr
Match: GCC42939.1 (hypothetical protein [Chiloscyllium punctatum]) HSP 1 Score: 105 bits (261), Expect = 3.44e-24 Identity = 65/163 (39.88%), Postives = 76/163 (46.63%), Query Frame = 0
BLAST of Cp4.1LG17g01970 vs. NCBI nr
Match: PLW41581.1 (hypothetical protein PCANC_17446 [Puccinia coronata f. sp. avenae]) HSP 1 Score: 99.0 bits (245), Expect = 1.33e-22 Identity = 64/160 (40.00%), Postives = 82/160 (51.25%), Query Frame = 0
BLAST of Cp4.1LG17g01970 vs. NCBI nr
Match: PLW42071.1 (hypothetical protein PCASD_11963 [Puccinia coronata f. sp. avenae]) HSP 1 Score: 95.1 bits (235), Expect = 1.38e-20 Identity = 67/172 (38.95%), Postives = 86/172 (50.00%), Query Frame = 0
BLAST of Cp4.1LG17g01970 vs. NCBI nr
Match: KAE8612826.1 (hypothetical protein XENTR_v10013008 [Xenopus tropicalis]) HSP 1 Score: 92.0 bits (227), Expect = 4.49e-18 Identity = 61/167 (36.53%), Postives = 100/167 (59.88%), Query Frame = 0
BLAST of Cp4.1LG17g01970 vs. NCBI nr
Match: GCC45258.1 (hypothetical protein [Chiloscyllium punctatum]) HSP 1 Score: 86.7 bits (213), Expect = 8.62e-18 Identity = 56/138 (40.58%), Postives = 65/138 (47.10%), Query Frame = 0
BLAST of Cp4.1LG17g01970 vs. ExPASy TrEMBL
Match: A0A401TJW8 (Uncharacterized protein (Fragment) OS=Chiloscyllium punctatum OX=137246 GN=chiPu_0026894 PE=4 SV=1) HSP 1 Score: 105 bits (261), Expect = 1.66e-24 Identity = 65/163 (39.88%), Postives = 76/163 (46.63%), Query Frame = 0
BLAST of Cp4.1LG17g01970 vs. ExPASy TrEMBL
Match: A0A2N5UUY6 (Uncharacterized protein OS=Puccinia coronata f. sp. avenae OX=200324 GN=PCANC_17446 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 6.44e-23 Identity = 64/160 (40.00%), Postives = 82/160 (51.25%), Query Frame = 0
BLAST of Cp4.1LG17g01970 vs. ExPASy TrEMBL
Match: A0A2N5UWD4 (Uncharacterized protein OS=Puccinia coronata f. sp. avenae OX=200324 GN=PCASD_11963 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 6.69e-21 Identity = 67/172 (38.95%), Postives = 86/172 (50.00%), Query Frame = 0
BLAST of Cp4.1LG17g01970 vs. ExPASy TrEMBL
Match: A0A401TRL6 (Uncharacterized protein (Fragment) OS=Chiloscyllium punctatum OX=137246 GN=chiPu_0029226 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 4.18e-18 Identity = 56/138 (40.58%), Postives = 65/138 (47.10%), Query Frame = 0
BLAST of Cp4.1LG17g01970 vs. ExPASy TrEMBL
Match: A0A2N5SWT8 (Uncharacterized protein OS=Puccinia coronata f. sp. avenae OX=200324 GN=PCASD_18663 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 6.83e-18 Identity = 61/146 (41.78%), Postives = 74/146 (50.68%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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