Cp4.1LG16g07150 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGCCGAAGTAAGCTCGCTCGTGCGAGTTCTTACAAGCTACAACAAAGCGGCGGCCGGAAACGATTCCGGCACCGAGAAATTAACGACTTTGATCACCCGAGACTTACTCAGCGGCGGCGAGTCTCAAGAATTGGACCTCGACCTCCATGTTCCTTCCGGCTGGGAAAAAAGGCTGGACTTGAAGGTACGATTTTTCTCCTTGAATTTTAAATTTTTANGGGTGTTTTGGTCATTTCACGAAGTAAATCTTTTACTCCTCAAATTAATCGATTTCACACGTGGCATGCCCAAGTCAATGCACGTCTCTTATAATATCCCACATTCCAATTAAATTTAAATACCTTATTTTCAAACTATAAATTAGGTTTTAATTTTTAAATTTAATATGTTTAGATTTTTTGTCAAAGTTTTTAAAACGTGTCTGGCAGGGAGAAGTGTCCATACCCTTATAAAGAACACGATTCATTTTCTTCTCCAATCGATAGGAGATCTCACAACTTAGCCAGTCATCGAGCGATGTGCCAACGAGCACGTTGGGCCTCGATGGGGAACAAAGTATTCTGTATACGGGTGTAGAAATCTCTCACGTGTTGAAGAGAAGCCCAAAAAGAAAAACTCAAATAGTACCATATGTGTTAATGGTGGGTTCTGTTGGATGATGAAAGTCCCACATCGGCTAATTTAGGGAATAATCATAGGTTTATAAACAAATAACACTCTCTCTATTGGAGTGAGATCTTTTGGGGAAGCCCAAAGTAAAGCCACGAGAGCTTGTGCTCAAAGTAGACAATATGGATACTATTGCGGAAAGTCATGCCCTAAACTTAGTCGTGTCAATAGATTGGTAAATCCTCAAATGTCTGACTCCTCGAACGCAATAGATTGGTAAATCCTCGAAGGCAATAGATTGGTAAATCCTCGAAGGCAATAGATTGGTAAATCCTCGAAGGCAATAGATTGGTAA ATGGCCGCCGAAGTAAGCTCGCTCGTGCGAGTTCTTACAAGCTACAACAAAGCGGCGGCCGGAAACGATTCCGGCACCGAGAAATTAACGACTTTGATCACCCGAGACTTACTCAGCGGCGGCGAGTCTCAAGAATTGGACCTCGACCTCCATGTTCCTTCCGGCTGGGAAAAAAGGCTGGACTTGAAGGCAATAGATTGGTAA ATGGCCGCCGAAGTAAGCTCGCTCGTGCGAGTTCTTACAAGCTACAACAAAGCGGCGGCCGGAAACGATTCCGGCACCGAGAAATTAACGACTTTGATCACCCGAGACTTACTCAGCGGCGGCGAGTCTCAAGAATTGGACCTCGACCTCCATGTTCCTTCCGGCTGGGAAAAAAGGCTGGACTTGAAGGCAATAGATTGGTAA MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRLDLKAIDW Homology
BLAST of Cp4.1LG16g07150 vs. NCBI nr
Match: XP_022986073.1 (uncharacterized protein LOC111483930 [Cucurbita maxima]) HSP 1 Score: 124 bits (310), Expect = 3.21e-33 Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g07150 vs. NCBI nr
Match: XP_023512147.1 (uncharacterized protein LOC111776954 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 124 bits (310), Expect = 3.21e-33 Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g07150 vs. NCBI nr
Match: XP_022943495.1 (uncharacterized protein LOC111448249 [Cucurbita moschata] >KAG6570588.1 hypothetical protein SDJN03_29503, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010440.1 hypothetical protein SDJN02_27233 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 124 bits (310), Expect = 3.29e-33 Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g07150 vs. NCBI nr
Match: XP_038901828.1 (uncharacterized protein LOC120088523 [Benincasa hispida]) HSP 1 Score: 97.8 bits (242), Expect = 5.14e-23 Identity = 55/73 (75.34%), Postives = 57/73 (78.08%), Query Frame = 0
BLAST of Cp4.1LG16g07150 vs. NCBI nr
Match: XP_008456306.1 (PREDICTED: uncharacterized protein LOC103496294 [Cucumis melo] >KAA0054671.1 putative YUP8H12R.23 protein [Cucumis melo var. makuwa] >TYK08600.1 putative YUP8H12R.23 protein [Cucumis melo var. makuwa]) HSP 1 Score: 94.4 bits (233), Expect = 1.14e-21 Identity = 53/73 (72.60%), Postives = 58/73 (79.45%), Query Frame = 0
BLAST of Cp4.1LG16g07150 vs. ExPASy TrEMBL
Match: A0A6J1JFF5 (uncharacterized protein LOC111483930 OS=Cucurbita maxima OX=3661 GN=LOC111483930 PE=4 SV=1) HSP 1 Score: 124 bits (310), Expect = 1.56e-33 Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g07150 vs. ExPASy TrEMBL
Match: A0A6J1FXV9 (uncharacterized protein LOC111448249 OS=Cucurbita moschata OX=3662 GN=LOC111448249 PE=4 SV=1) HSP 1 Score: 124 bits (310), Expect = 1.60e-33 Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g07150 vs. ExPASy TrEMBL
Match: A0A5D3CB81 (Putative YUP8H12R.23 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00220 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 5.51e-22 Identity = 53/73 (72.60%), Postives = 58/73 (79.45%), Query Frame = 0
BLAST of Cp4.1LG16g07150 vs. ExPASy TrEMBL
Match: A0A1S3C2I3 (uncharacterized protein LOC103496294 OS=Cucumis melo OX=3656 GN=LOC103496294 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 5.51e-22 Identity = 53/73 (72.60%), Postives = 58/73 (79.45%), Query Frame = 0
BLAST of Cp4.1LG16g07150 vs. ExPASy TrEMBL
Match: A0A0A0KAN5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G137580 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 2.16e-21 Identity = 52/73 (71.23%), Postives = 58/73 (79.45%), Query Frame = 0
BLAST of Cp4.1LG16g07150 vs. TAIR 10
Match: AT1G79160.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16500.1); Has 104 Blast hits to 102 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.9 bits (154), Expect = 5.5e-11 Identity = 37/72 (51.39%), Postives = 49/72 (68.06%), Query Frame = 0
BLAST of Cp4.1LG16g07150 vs. TAIR 10
Match: AT1G16500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits to 134 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 61.2 bits (147), Expect = 3.6e-10 Identity = 36/77 (46.75%), Postives = 49/77 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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