Cp4.1LG16g07150 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG16g07150
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG16: 7287369 .. 7288337 (+)
RNA-Seq ExpressionCp4.1LG16g07150
SyntenyCp4.1LG16g07150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCCGAAGTAAGCTCGCTCGTGCGAGTTCTTACAAGCTACAACAAAGCGGCGGCCGGAAACGATTCCGGCACCGAGAAATTAACGACTTTGATCACCCGAGACTTACTCAGCGGCGGCGAGTCTCAAGAATTGGACCTCGACCTCCATGTTCCTTCCGGCTGGGAAAAAAGGCTGGACTTGAAGGTACGATTTTTCTCCTTGAATTTTAAATTTTTANGGGTGTTTTGGTCATTTCACGAAGTAAATCTTTTACTCCTCAAATTAATCGATTTCACACGTGGCATGCCCAAGTCAATGCACGTCTCTTATAATATCCCACATTCCAATTAAATTTAAATACCTTATTTTCAAACTATAAATTAGGTTTTAATTTTTAAATTTAATATGTTTAGATTTTTTGTCAAAGTTTTTAAAACGTGTCTGGCAGGGAGAAGTGTCCATACCCTTATAAAGAACACGATTCATTTTCTTCTCCAATCGATAGGAGATCTCACAACTTAGCCAGTCATCGAGCGATGTGCCAACGAGCACGTTGGGCCTCGATGGGGAACAAAGTATTCTGTATACGGGTGTAGAAATCTCTCACGTGTTGAAGAGAAGCCCAAAAAGAAAAACTCAAATAGTACCATATGTGTTAATGGTGGGTTCTGTTGGATGATGAAAGTCCCACATCGGCTAATTTAGGGAATAATCATAGGTTTATAAACAAATAACACTCTCTCTATTGGAGTGAGATCTTTTGGGGAAGCCCAAAGTAAAGCCACGAGAGCTTGTGCTCAAAGTAGACAATATGGATACTATTGCGGAAAGTCATGCCCTAAACTTAGTCGTGTCAATAGATTGGTAAATCCTCAAATGTCTGACTCCTCGAACGCAATAGATTGGTAAATCCTCGAAGGCAATAGATTGGTAAATCCTCGAAGGCAATAGATTGGTAAATCCTCGAAGGCAATAGATTGGTAA

mRNA sequence

ATGGCCGCCGAAGTAAGCTCGCTCGTGCGAGTTCTTACAAGCTACAACAAAGCGGCGGCCGGAAACGATTCCGGCACCGAGAAATTAACGACTTTGATCACCCGAGACTTACTCAGCGGCGGCGAGTCTCAAGAATTGGACCTCGACCTCCATGTTCCTTCCGGCTGGGAAAAAAGGCTGGACTTGAAGGCAATAGATTGGTAA

Coding sequence (CDS)

ATGGCCGCCGAAGTAAGCTCGCTCGTGCGAGTTCTTACAAGCTACAACAAAGCGGCGGCCGGAAACGATTCCGGCACCGAGAAATTAACGACTTTGATCACCCGAGACTTACTCAGCGGCGGCGAGTCTCAAGAATTGGACCTCGACCTCCATGTTCCTTCCGGCTGGGAAAAAAGGCTGGACTTGAAGGCAATAGATTGGTAA

Protein sequence

MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRLDLKAIDW
Homology
[Close]
BLAST of Cp4.1LG16g07150 vs. NCBI nr
Match: XP_022986073.1 (uncharacterized protein LOC111483930 [Cucurbita maxima])

HSP 1 Score: 124 bits (310), Expect = 3.21e-33
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL 60
          MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL
Sbjct: 1  MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL 60

Query: 61 DLKA 64
          DLK+
Sbjct: 61 DLKS 64

[Close]
BLAST of Cp4.1LG16g07150 vs. NCBI nr
Match: XP_023512147.1 (uncharacterized protein LOC111776954 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 124 bits (310), Expect = 3.21e-33
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL 60
          MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL
Sbjct: 1  MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL 60

Query: 61 DLKA 64
          DLK+
Sbjct: 61 DLKS 64

[Close]
BLAST of Cp4.1LG16g07150 vs. NCBI nr
Match: XP_022943495.1 (uncharacterized protein LOC111448249 [Cucurbita moschata] >KAG6570588.1 hypothetical protein SDJN03_29503, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010440.1 hypothetical protein SDJN02_27233 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 124 bits (310), Expect = 3.29e-33
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL 60
          MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL
Sbjct: 1  MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL 60

Query: 61 DLKA 64
          DLK+
Sbjct: 61 DLKS 64

[Close]
BLAST of Cp4.1LG16g07150 vs. NCBI nr
Match: XP_038901828.1 (uncharacterized protein LOC120088523 [Benincasa hispida])

HSP 1 Score: 97.8 bits (242), Expect = 5.14e-23
Identity = 55/73 (75.34%), Postives = 57/73 (78.08%), Query Frame = 0 

Query: 1  MAAEVSSLVRVLTSYNK----AAAGNDSGTEKLTTLITRDLLSGG-----ESQELDLDLH 60
          MAAEVSSLVRVLT YNK       GNDS  EKLT LITRDLLSGG     ESQELDLDLH
Sbjct: 1  MAAEVSSLVRVLTGYNKDDRHRTVGNDSAAEKLTPLITRDLLSGGYSKYTESQELDLDLH 60

Query: 61 VPSGWEKRLDLKA 64
          VPSGWE+RLDLK+
Sbjct: 61 VPSGWERRLDLKS 73

[Close]
BLAST of Cp4.1LG16g07150 vs. NCBI nr
Match: XP_008456306.1 (PREDICTED: uncharacterized protein LOC103496294 [Cucumis melo] >KAA0054671.1 putative YUP8H12R.23 protein [Cucumis melo var. makuwa] >TYK08600.1 putative YUP8H12R.23 protein [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 1.14e-21
Identity = 53/73 (72.60%), Postives = 58/73 (79.45%), Query Frame = 0 

Query: 1  MAAEVSSLVRVLTSYNKA----AAGNDSGTEKLTTLITRDLLSGG-----ESQELDLDLH 60
          MAAEVSSLVRVLT+YNK      AGN+S  EKL  LITRDLL+GG     ESQELDLDLH
Sbjct: 1  MAAEVSSLVRVLTTYNKEDRHLTAGNESTAEKLAPLITRDLLNGGYSKFTESQELDLDLH 60

Query: 61 VPSGWEKRLDLKA 64
          VPSGWE+RLDLK+
Sbjct: 61 VPSGWERRLDLKS 73

[Close]
BLAST of Cp4.1LG16g07150 vs. ExPASy TrEMBL
Match: A0A6J1JFF5 (uncharacterized protein LOC111483930 OS=Cucurbita maxima OX=3661 GN=LOC111483930 PE=4 SV=1)

HSP 1 Score: 124 bits (310), Expect = 1.56e-33
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL 60
          MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL
Sbjct: 1  MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL 60

Query: 61 DLKA 64
          DLK+
Sbjct: 61 DLKS 64

[Close]
BLAST of Cp4.1LG16g07150 vs. ExPASy TrEMBL
Match: A0A6J1FXV9 (uncharacterized protein LOC111448249 OS=Cucurbita moschata OX=3662 GN=LOC111448249 PE=4 SV=1)

HSP 1 Score: 124 bits (310), Expect = 1.60e-33
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL 60
          MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL
Sbjct: 1  MAAEVSSLVRVLTSYNKAAAGNDSGTEKLTTLITRDLLSGGESQELDLDLHVPSGWEKRL 60

Query: 61 DLKA 64
          DLK+
Sbjct: 61 DLKS 64

[Close]
BLAST of Cp4.1LG16g07150 vs. ExPASy TrEMBL
Match: A0A5D3CB81 (Putative YUP8H12R.23 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00220 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 5.51e-22
Identity = 53/73 (72.60%), Postives = 58/73 (79.45%), Query Frame = 0 

Query: 1  MAAEVSSLVRVLTSYNKA----AAGNDSGTEKLTTLITRDLLSGG-----ESQELDLDLH 60
          MAAEVSSLVRVLT+YNK      AGN+S  EKL  LITRDLL+GG     ESQELDLDLH
Sbjct: 1  MAAEVSSLVRVLTTYNKEDRHLTAGNESTAEKLAPLITRDLLNGGYSKFTESQELDLDLH 60

Query: 61 VPSGWEKRLDLKA 64
          VPSGWE+RLDLK+
Sbjct: 61 VPSGWERRLDLKS 73

[Close]
BLAST of Cp4.1LG16g07150 vs. ExPASy TrEMBL
Match: A0A1S3C2I3 (uncharacterized protein LOC103496294 OS=Cucumis melo OX=3656 GN=LOC103496294 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 5.51e-22
Identity = 53/73 (72.60%), Postives = 58/73 (79.45%), Query Frame = 0 

Query: 1  MAAEVSSLVRVLTSYNKA----AAGNDSGTEKLTTLITRDLLSGG-----ESQELDLDLH 60
          MAAEVSSLVRVLT+YNK      AGN+S  EKL  LITRDLL+GG     ESQELDLDLH
Sbjct: 1  MAAEVSSLVRVLTTYNKEDRHLTAGNESTAEKLAPLITRDLLNGGYSKFTESQELDLDLH 60

Query: 61 VPSGWEKRLDLKA 64
          VPSGWE+RLDLK+
Sbjct: 61 VPSGWERRLDLKS 73

[Close]
BLAST of Cp4.1LG16g07150 vs. ExPASy TrEMBL
Match: A0A0A0KAN5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G137580 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.16e-21
Identity = 52/73 (71.23%), Postives = 58/73 (79.45%), Query Frame = 0 

Query: 1  MAAEVSSLVRVLTSYNKA----AAGNDSGTEKLTTLITRDLLSGG-----ESQELDLDLH 60
          MAAEVSSLVRVLT+YNK       G++S  EKLT LITRDLL+GG     ESQELDLDLH
Sbjct: 1  MAAEVSSLVRVLTTYNKEDRHRTGGDESTAEKLTPLITRDLLNGGYSKFTESQELDLDLH 60

Query: 61 VPSGWEKRLDLKA 64
          VPSGWE+RLDLK+
Sbjct: 61 VPSGWERRLDLKS 73

[Close]
BLAST of Cp4.1LG16g07150 vs. TAIR 10
Match: AT1G79160.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16500.1); Has 104 Blast hits to 102 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 5.5e-11
Identity = 37/72 (51.39%), Postives = 49/72 (68.06%), Query Frame = 0 

Query: 1  MAAEVSSLVRVLTSY--NKAAAGNDSGTEKLTTLITRDLLSGG------ESQELDLDLHV 60
          MAA+VSSLVR+L+ Y  ++A   + +G +    L+TRDLL  G       S ELDLDL V
Sbjct: 5  MAADVSSLVRLLSGYKDDRAVVKDSAGAKSSAALMTRDLLGNGRGGGGDRSLELDLDLQV 64

Query: 61 PSGWEKRLDLKA 65
          P+G+EKRLDLK+
Sbjct: 65 PTGYEKRLDLKS 76

[Close]
BLAST of Cp4.1LG16g07150 vs. TAIR 10
Match: AT1G16500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits to 134 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 3.6e-10
Identity = 36/77 (46.75%), Postives = 49/77 (63.64%), Query Frame = 0 

Query: 1  MAAEVSSLVRVLTSY--NKAAAGNDSGTEKLTTLITRDLL---------SGGESQ--ELD 60
          MAA+VSSLVR+L+ +  ++    + +G      L+TRDLL          GG+ Q  ELD
Sbjct: 1  MAADVSSLVRILSRFKDDRTVVKDSTGPRSTVALMTRDLLGIGGCVGGGGGGDEQSLELD 60

Query: 61 LDLHVPSGWEKRLDLKA 65
          LD+ VP+GWEKRLDLK+
Sbjct: 61 LDVQVPNGWEKRLDLKS 77

The following BLAST results are available for this feature:
BLAST of Cp4.1LG16g07150 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG16g07150 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022986073.13.21e-3398.44uncharacterized protein LOC111483930 [Cucurbita maxima][more]
XP_023512147.13.21e-3398.44uncharacterized protein LOC111776954 [Cucurbita pepo subsp. pepo][more]
XP_022943495.13.29e-3398.44uncharacterized protein LOC111448249 [Cucurbita moschata] >KAG6570588.1 hypothet... [more]
XP_038901828.15.14e-2375.34uncharacterized protein LOC120088523 [Benincasa hispida][more]
XP_008456306.11.14e-2172.60PREDICTED: uncharacterized protein LOC103496294 [Cucumis melo] >KAA0054671.1 put... [more]
BLAST of Cp4.1LG16g07150 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JFF51.56e-3398.44uncharacterized protein LOC111483930 OS=Cucurbita maxima OX=3661 GN=LOC111483930... [more]
A0A6J1FXV91.60e-3398.44uncharacterized protein LOC111448249 OS=Cucurbita moschata OX=3662 GN=LOC1114482... [more]
A0A5D3CB815.51e-2272.60Putative YUP8H12R.23 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A1S3C2I35.51e-2272.60uncharacterized protein LOC103496294 OS=Cucumis melo OX=3656 GN=LOC103496294 PE=... [more]
A0A0A0KAN52.16e-2171.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G137580 PE=4 SV=1[more]
BLAST of Cp4.1LG16g07150 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G79160.15.5e-1151.39unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G16500.13.6e-1046.75unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33177PUTATIVE-RELATEDcoord: 1..63
NoneNo IPR availablePANTHERPTHR33177:SF24FILAMENTOUS HEMAGGLUTININ TRANSPORTERcoord: 1..63

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG16g07150.1Cp4.1LG16g07150.1mRNA