Cp4.1LG16g05050 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g05050
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Serine/arginine repetitive matrix protein 1-like
Location	Cp4.1LG16: 6047682 .. 6048305 (-)
RNA-Seq Expression	Cp4.1LG16g05050
Synteny	Cp4.1LG16g05050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAACGCCTCACCGTTTCCCACCGTCCAACGCCTCTCCCGAAACCCTAACCCATTTCTCCGAAGAAGATGAGCTCAATCTCCTGAATTGCTACCTCCAAATCGCCAGATCCGCAAACCCCACCAGCAATTCGCAGCCCACTCTCGACTCTCCGGCCTTGGACCGCATCGAGACCGCTCTCCGCCCAAAATTCACCTACTCCCACATCGCCGATAAGCTCCACAGGCTCAAACTCCAGTACCACAAACTCGCAAGGACTAAGTCCTTAATCAAAACTCCCCACCACCGTCGAATTCTCGAGATCGGCCGAAGCATCTGGGGAAAACCCCCCACGTCCAGAACAAAACCACAGGCGATTTTAAGGGCAATTCCACGGAGAATCAAACAAAGGTCAGTCTCAAGCACAAAGGGGGTTGATCTGAACGACTTTCCCGTTCTTTTGGGTGAATTTTCTCGGCGGTTTCCGGGAAATGGGGTGTGGAGAGAAGGGCTGAGGGGAATGGAGGAGAAGAGTTTGAGGGATATGAATGAAAAATGGGTTTTGTTGCATATTGAAGAGGCAGAGCTTAAGGCAAGAAGGGCTGCGTTATTACAGAAGCAACTTAGACTTACAGACTTCTGA

mRNA sequence

ATGTCAACGCCTCACCGTTTCCCACCGTCCAACGCCTCTCCCGAAACCCTAACCCATTTCTCCGAAGAAGATGAGCTCAATCTCCTGAATTGCTACCTCCAAATCGCCAGATCCGCAAACCCCACCAGCAATTCGCAGCCCACTCTCGACTCTCCGGCCTTGGACCGCATCGAGACCGCTCTCCGCCCAAAATTCACCTACTCCCACATCGCCGATAAGCTCCACAGGCTCAAACTCCAGTACCACAAACTCGCAAGGACTAAGTCCTTAATCAAAACTCCCCACCACCGTCGAATTCTCGAGATCGGCCGAAGCATCTGGGGAAAACCCCCCACGTCCAGAACAAAACCACAGGCGATTTTAAGGGCAATTCCACGGAGAATCAAACAAAGGTCAGTCTCAAGCACAAAGGGGGTTGATCTGAACGACTTTCCCGTTCTTTTGGGTGAATTTTCTCGGCGGTTTCCGGGAAATGGGGTGTGGAGAGAAGGGCTGAGGGGAATGGAGGAGAAGAGTTTGAGGGATATGAATGAAAAATGGGTTTTGTTGCATATTGAAGAGGCAGAGCTTAAGGCAAGAAGGGCTGCGTTATTACAGAAGCAACTTAGACTTACAGACTTCTGA

Coding sequence (CDS)

ATGTCAACGCCTCACCGTTTCCCACCGTCCAACGCCTCTCCCGAAACCCTAACCCATTTCTCCGAAGAAGATGAGCTCAATCTCCTGAATTGCTACCTCCAAATCGCCAGATCCGCAAACCCCACCAGCAATTCGCAGCCCACTCTCGACTCTCCGGCCTTGGACCGCATCGAGACCGCTCTCCGCCCAAAATTCACCTACTCCCACATCGCCGATAAGCTCCACAGGCTCAAACTCCAGTACCACAAACTCGCAAGGACTAAGTCCTTAATCAAAACTCCCCACCACCGTCGAATTCTCGAGATCGGCCGAAGCATCTGGGGAAAACCCCCCACGTCCAGAACAAAACCACAGGCGATTTTAAGGGCAATTCCACGGAGAATCAAACAAAGGTCAGTCTCAAGCACAAAGGGGGTTGATCTGAACGACTTTCCCGTTCTTTTGGGTGAATTTTCTCGGCGGTTTCCGGGAAATGGGGTGTGGAGAGAAGGGCTGAGGGGAATGGAGGAGAAGAGTTTGAGGGATATGAATGAAAAATGGGTTTTGTTGCATATTGAAGAGGCAGAGCTTAAGGCAAGAAGGGCTGCGTTATTACAGAAGCAACTTAGACTTACAGACTTCTGA

Protein sequence

MSTPHRFPPSNASPETLTHFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRILEIGRSIWGKPPTSRTKPQAILRAIPRRIKQRSVSSTKGVDLNDFPVLLGEFSRRFPGNGVWREGLRGMEEKSLRDMNEKWVLLHIEEAELKARRAALLQKQLRLTDF

Homology

[Close]

BLAST of Cp4.1LG16g05050 vs. NCBI nr
Match: KAG6570827.1 (hypothetical protein SDJN03_29742, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 401 bits (1030), Expect = 1.09e-140
Identity = 202/207 (97.58%), Postives = 203/207 (98.07%), Query Frame = 0


Query: 1   MSTPHRFPPSNASPETLTHFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETA 60
           MSTPHRFPPSNASPETLTHFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETA
Sbjct: 1   MSTPHRFPPSNASPETLTHFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETA 60

Query: 61  LRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRILEIGRSIWGKPPTSRTKPQAI 120
           LRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRILEIGRSIWGKPPTSRTKPQAI
Sbjct: 61  LRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRILEIGRSIWGKPPTSRTKPQAI 120

Query: 121 LRAIPRRIKQRSVSSTKGVDLNDFPVLLGEFSRRFPGNGVWREGLRGMEEKSLRDMNEKW 180
           LRAIPRRIKQRS SS KGVDLNDFPVLL EFSRRFPGNGVW+EGLRGMEEKSLRDMNEKW
Sbjct: 121 LRAIPRRIKQRSGSSKKGVDLNDFPVLLSEFSRRFPGNGVWKEGLRGMEEKSLRDMNEKW 180

Query: 181 VLLHIEEAELKARRAALLQKQLRLTDF 207
           VLLHIEEAELKARRAALLQKQLRL DF
Sbjct: 181 VLLHIEEAELKARRAALLQKQLRLADF 207

[Close]

BLAST of Cp4.1LG16g05050 vs. NCBI nr
Match: KGN46890.1 (hypothetical protein Csa_020607 [Cucumis sativus])

HSP 1 Score: 280 bits (717), Expect = 1.08e-92
Identity = 151/222 (68.02%), Postives = 177/222 (79.73%), Query Frame = 0


Query: 1   MSTPHRFPPSNASPETLT---------HFSEEDELNLLNCYLQIARSANPTSNSQPTLDS 60
           MST HR PPS+ASPETLT         HF++EDE+NLLN YLQI+RS NPT NS PTLDS
Sbjct: 1   MSTLHRSPPSSASPETLTQSNNQIDQLHFNDEDEINLLNSYLQISRSENPTKNSLPTLDS 60

Query: 61  PALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRILEIGRSIWGKPP 120
            A DR++TA+ PKF++S IADKLHRLKL YHK ARTKS IKTPH R+IL++GRSIWGK P
Sbjct: 61  QAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRSIWGKSP 120

Query: 121 TSRT-KPQAIL--RAIPRRIKQRSVSSTKGV----DLNDFPVLLGEFSRRFPGNGVWREG 180
           T  T KPQ I   R + RRIKQRS++  +GV    DL +FPVL+ EFSR+FPGNGVWR+G
Sbjct: 121 TPVTRKPQVISPSRLLSRRIKQRSITRKEGVGVDVDLKNFPVLVAEFSRQFPGNGVWRDG 180

Query: 181 LRGMEEKSLRDMNEKWVLLHIEEAELKARRAALLQKQLRLTD 206
           LR M EK+L+DMNEKWVLLHIE AELKARRAALL++QLR T+
Sbjct: 181 LRRMNEKNLKDMNEKWVLLHIEGAELKARRAALLKEQLRTTE 222

[Close]

BLAST of Cp4.1LG16g05050 vs. NCBI nr
Match: KAG6606028.1 (hypothetical protein SDJN03_03345, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 277 bits (709), Expect = 1.23e-91
Identity = 151/221 (68.33%), Postives = 170/221 (76.92%), Query Frame = 0


Query: 1   MSTPHRFPPS-------NASPETLT---------HFSEEDELNLLNCYLQIARSANPTSN 60
           MSTP R PPS       +A+PE LT         HF++EDEL+LLNCYL++A S     N
Sbjct: 1   MSTPRRSPPSTGNRASSDAAPEPLTQSQKNQLQVHFTDEDELDLLNCYLEVAGS----KN 60

Query: 61  SQPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRILEIGR 120
           SQPTLDSPALDRI TAL  KF +SHIADKLHRLK+QYHK ARTKS IKTPHH RILEIGR
Sbjct: 61  SQPTLDSPALDRIATALGHKFRHSHIADKLHRLKIQYHKFARTKSFIKTPHHLRILEIGR 120

Query: 121 SIWGKPPTSRTKPQAILRAIPRRIKQRSVSSTKGVDLNDFPVLLGEFSRRFPGNGVWREG 180
           SIWGKP   RTKPQ I R    RI+ RSV+  KGVDL +FPVL+ EFSR+FPGNGVWREG
Sbjct: 121 SIWGKPHIPRTKPQVISR----RIRGRSVAKKKGVDLKNFPVLVSEFSRQFPGNGVWREG 180

Query: 181 LRGMEEKSLRDMNEKWVLLHIEEAELKARRAALLQKQLRLT 205
           L+GMEE SL+ MNEKWVLLHIEEAELKARR AL+Q+Q+  T
Sbjct: 181 LKGMEEWSLKGMNEKWVLLHIEEAELKARRVALIQRQIGTT 213

[Close]

BLAST of Cp4.1LG16g05050 vs. NCBI nr
Match: KAA0037301.1 (serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa] >TYK24183.1 serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 277 bits (708), Expect = 2.61e-91
Identity = 151/225 (67.11%), Postives = 175/225 (77.78%), Query Frame = 0


Query: 1   MSTPHRFPPSNASPETLT---------------HFSEEDELNLLNCYLQIARSANPTSNS 60
           MSTPHR  PSNASPETLT               HF++EDE+NLL  YLQI+RS NPT NS
Sbjct: 1   MSTPHRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNS 60

Query: 61  QPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRILEIGRS 120
            PTLDSPA DR++TA+ PKF++S IADKLHRLKL YHK ARTKS IKTPH R+IL++GRS
Sbjct: 61  LPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRS 120

Query: 121 IWGKPPTSRT-KPQAIL--RAIPRRIKQRSVSSTKGV----DLNDFPVLLGEFSRRFPGN 180
           IWGK PT  T KPQ I   R + RRIKQRS +  +GV    DL +FPVL+ EFS++FPGN
Sbjct: 121 IWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGN 180

Query: 181 GVWREGLRGMEEKSLRDMNEKWVLLHIEEAELKARRAALLQKQLR 203
           GVWREGLR MEEK+L+DMNEKWVLLHIE AELKARRAALL++QL+
Sbjct: 181 GVWREGLRRMEEKNLKDMNEKWVLLHIEGAELKARRAALLKQQLK 225

[Close]

BLAST of Cp4.1LG16g05050 vs. NCBI nr
Match: KAF8039515.1 (hypothetical protein BT93_B1894 [Corymbia citriodora subsp. variegata])

HSP 1 Score: 147 bits (371), Expect = 6.03e-40
Identity = 92/220 (41.82%), Postives = 125/220 (56.82%), Query Frame = 0


Query: 5   HRFPPSNA--SPETLTHFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETALR 64
           H  PP+    SP     FSE DE+ LL     +A+  NP+ +  P  D+P LDRIE +L 
Sbjct: 29  HHRPPAGEQQSPRPDKLFSEADEIRLLK---SLAKLINPSLS--PAADTPTLDRIEKSLG 88

Query: 65  PKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRILEIGRSIWGKPPTSRT----KPQ 124
           P FT   IA+K+ RL+ +YH+ ARTK+LIKTPH R++ E+ R +WGK P+SR     K +
Sbjct: 89  PNFTRGQIANKIRRLRQKYHRQARTKALIKTPHDRKVFELARDMWGKRPSSRKERKRKEE 148

Query: 125 AILRAIPRRIKQRSVSSTKG--------------VDLNDFPVLLGEFSRRFPGNGVWREG 184
              +A     +++      G               DL +FP L+ E  R FPGNGVWREG
Sbjct: 149 ESKQANLEEEREKDEGEILGGEEESGGGVVAVAVTDLGNFPALVEECDRCFPGNGVWREG 208

Query: 185 LRGMEEKSLRDMNEKWVLLHIEEAELKARRAALLQKQLRL 204
           L+ +EE  LR MNE+ V L +EEA L A++A L Q   R+
Sbjct: 209 LKRLEEGRLRKMNERVVWLRLEEATLMAKKAELTQDLTRM 243

[Close]

BLAST of Cp4.1LG16g05050 vs. ExPASy TrEMBL
Match: A0A0A0KAX7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G148320 PE=3 SV=1)

HSP 1 Score: 280 bits (717), Expect = 5.23e-93
Identity = 151/222 (68.02%), Postives = 177/222 (79.73%), Query Frame = 0


Query: 1   MSTPHRFPPSNASPETLT---------HFSEEDELNLLNCYLQIARSANPTSNSQPTLDS 60
           MST HR PPS+ASPETLT         HF++EDE+NLLN YLQI+RS NPT NS PTLDS
Sbjct: 1   MSTLHRSPPSSASPETLTQSNNQIDQLHFNDEDEINLLNSYLQISRSENPTKNSLPTLDS 60

Query: 61  PALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRILEIGRSIWGKPP 120
            A DR++TA+ PKF++S IADKLHRLKL YHK ARTKS IKTPH R+IL++GRSIWGK P
Sbjct: 61  QAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRSIWGKSP 120

Query: 121 TSRT-KPQAIL--RAIPRRIKQRSVSSTKGV----DLNDFPVLLGEFSRRFPGNGVWREG 180
           T  T KPQ I   R + RRIKQRS++  +GV    DL +FPVL+ EFSR+FPGNGVWR+G
Sbjct: 121 TPVTRKPQVISPSRLLSRRIKQRSITRKEGVGVDVDLKNFPVLVAEFSRQFPGNGVWRDG 180

Query: 181 LRGMEEKSLRDMNEKWVLLHIEEAELKARRAALLQKQLRLTD 206
           LR M EK+L+DMNEKWVLLHIE AELKARRAALL++QLR T+
Sbjct: 181 LRRMNEKNLKDMNEKWVLLHIEGAELKARRAALLKEQLRTTE 222

[Close]

BLAST of Cp4.1LG16g05050 vs. ExPASy TrEMBL
Match: A0A5A7T6T1 (Serine/arginine repetitive matrix protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1754G00170 PE=3 SV=1)

HSP 1 Score: 277 bits (708), Expect = 1.26e-91
Identity = 151/225 (67.11%), Postives = 175/225 (77.78%), Query Frame = 0


Query: 1   MSTPHRFPPSNASPETLT---------------HFSEEDELNLLNCYLQIARSANPTSNS 60
           MSTPHR  PSNASPETLT               HF++EDE+NLL  YLQI+RS NPT NS
Sbjct: 1   MSTPHRSLPSNASPETLTLTLTLTQPNNQTDQLHFTDEDEINLLKSYLQISRSENPTKNS 60

Query: 61  QPTLDSPALDRIETALRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRILEIGRS 120
            PTLDSPA DR++TA+ PKF++S IADKLHRLKL YHK ARTKS IKTPH R+IL++GRS
Sbjct: 61  LPTLDSPAFDRLQTAVGPKFSHSVIADKLHRLKLLYHKFARTKSFIKTPHQRQILDLGRS 120

Query: 121 IWGKPPTSRT-KPQAIL--RAIPRRIKQRSVSSTKGV----DLNDFPVLLGEFSRRFPGN 180
           IWGK PT  T KPQ I   R + RRIKQRS +  +GV    DL +FPVL+ EFS++FPGN
Sbjct: 121 IWGKSPTPITRKPQVISPSRILSRRIKQRSSTRKEGVGVDIDLKNFPVLVAEFSQQFPGN 180

Query: 181 GVWREGLRGMEEKSLRDMNEKWVLLHIEEAELKARRAALLQKQLR 203
           GVWREGLR MEEK+L+DMNEKWVLLHIE AELKARRAALL++QL+
Sbjct: 181 GVWREGLRRMEEKNLKDMNEKWVLLHIEGAELKARRAALLKQQLK 225

[Close]

BLAST of Cp4.1LG16g05050 vs. ExPASy TrEMBL
Match: A0A6P5ZW34 (probable transcription factor At1g61730 OS=Durio zibethinus OX=66656 GN=LOC111304355 PE=3 SV=1)

HSP 1 Score: 143 bits (360), Expect = 2.78e-39
Identity = 83/204 (40.69%), Postives = 127/204 (62.25%), Query Frame = 0


Query: 1   MSTPHRFPPSNASPETLTHFSEEDELNLLNCYLQIARSANPTSNSQPTLDSPALDRIETA 60
           MSTP   P +  +  +   FSE DE  +L C ++  +S +P      T+ +P ++RI   
Sbjct: 1   MSTPT--PSTTPNGRSSRVFSESDETQILRCLIRATKSVSPPIT---TVGTPTINRIVKR 60

Query: 61  LRPKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRILEIGRSIWGKPPTSRTKPQAI 120
           L  +F+ S I DK+ RL+++YHK ARTKSL++T H RRI ++ + IWGK  T        
Sbjct: 61  LNYQFSPSQINDKVRRLRMKYHKHARTKSLVRTHHDRRIFKLSKRIWGKKIT-------- 120

Query: 121 LRAIPRRIKQRSVSST-KGV-DLNDFPVLLGEFSRRFPGNGVWREGLRGMEEKSLRDMNE 180
               P++ K+R  S    GV DL+ FP L+ EFSR  P N VW+E ++G+EE+ L+ M++
Sbjct: 121 ----PKKAKERMESGKGDGVWDLDKFPYLVAEFSRVLPDNEVWKERMKGLEEEKLKKMDQ 180

Query: 181 KWVLLHIEEAELKARRAALLQKQL 202
           +WVL+ +EEA+L A++A L+QKQ+
Sbjct: 181 EWVLIKVEEAKLVAKKAELMQKQI 187

[Close]

BLAST of Cp4.1LG16g05050 vs. ExPASy TrEMBL
Match: A0A2H5MZL8 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_281630 PE=3 SV=1)

HSP 1 Score: 142 bits (357), Expect = 2.26e-38
Identity = 77/212 (36.32%), Postives = 132/212 (62.26%), Query Frame = 0


Query: 8   PPSNASPETLTHFSEEDELNLLNCYLQIAR-----SANPTSNSQPTLDSPALDRIETALR 67
           P S+ + +    F++ DE+ LL  + ++A      S++ T NS  TLDS + +RI ++L 
Sbjct: 15  PVSSPTSQNGRVFTDSDEIRLLKIFKKLAEQNRSSSSSSTPNSTITLDSSSFNRINSSLG 74

Query: 68  PKFTYSHIADKLHRLKLQYHKLARTKSLIKTPHHRRILEIGRSIWGKPPTSRTKPQAILR 127
            KFT++ I DK+ RL+++YHK AR+KSL+KTPH + + +I + IWGK  T+R K    ++
Sbjct: 75  SKFTHAQITDKIRRLRVKYHKQARSKSLVKTPHDQALFKIAQLIWGKKKTNRKKEAKKVQ 134

Query: 128 ----------AIPRRIKQRSVSSTKGVDLNDFPVLLGEFSRRFPGNGVWREGLRGMEEKS 187
                        ++ +Q      +G +L+++PVL GE S+  P N VWRE L+ +    
Sbjct: 135 NSASADDEDEGEEQKNEQNEEREREGAELDEYPVLAGELSKYLPMNLVWREALKSLGNDK 194

Query: 188 LRDMNEKWVLLHIEEAELKARRAALLQKQLRL 204
           L++MN+KW+L+ IEEA++ +++A L+++Q +L
Sbjct: 195 LKEMNDKWMLIGIEEAKIVSKKADLVKEQTQL 226

[Close]

BLAST of Cp4.1LG16g05050 vs. ExPASy TrEMBL
Match: V4RSW9 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029167mg PE=3 SV=1)

HSP 1 Score: 142 bits (357), Expect = 2.65e-38
Identity = 76/200 (38.00%), Postives = 127/200 (63.50%), Query Frame = 0


Query: 20  FSEEDELNLLNCYLQIAR-----SANPTSNSQPTLDSPALDRIETALRPKFTYSHIADKL 79
           F++ DE+ LL  + ++A      S++ T NS  TLDS + +RI ++L  KFT++ I DK+
Sbjct: 27  FTDSDEIRLLKIFKKLAEQNRSSSSSSTPNSTITLDSSSFNRINSSLGSKFTHAQITDKI 86

Query: 80  HRLKLQYHKLARTKSLIKTPHHRRILEIGRSIWGKPPTSRTKPQAILR----------AI 139
            RL+++YHK AR+KSLIKTPH + + +I + IWGK  T+R K    ++            
Sbjct: 87  RRLRVKYHKQARSKSLIKTPHDQALFKIAQLIWGKKKTNRKKEAKKVQNSASADDEDEGE 146

Query: 140 PRRIKQRSVSSTKGVDLNDFPVLLGEFSRRFPGNGVWREGLRGMEEKSLRDMNEKWVLLH 199
            ++ +Q      +G +L+++PVL GE S+  P N VWRE L+ +    L++MN+KW+L+ 
Sbjct: 147 EQKNEQNEEREREGAELDEYPVLAGELSKYLPMNLVWREALKSLGNDKLKEMNDKWMLIG 206

Query: 200 IEEAELKARRAALLQKQLRL 204
           IEEA++ +++A L+++Q +L
Sbjct: 207 IEEAKIVSKKADLVKEQTQL 226

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g05050 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG16g05050 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570827.1	1.09e-140	97.58	hypothetical protein SDJN03_29742, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KGN46890.1	1.08e-92	68.02	hypothetical protein Csa_020607 [Cucumis sativus]	[more]
KAG6606028.1	1.23e-91	68.33	hypothetical protein SDJN03_03345, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0037301.1	2.61e-91	67.11	serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa] >TYK...	[more]
KAF8039515.1	6.03e-40	41.82	hypothetical protein BT93_B1894 [Corymbia citriodora subsp. variegata]	[more]

BLAST of Cp4.1LG16g05050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAX7	5.23e-93	68.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G148320 PE=3 SV=1	[more]
A0A5A7T6T1	1.26e-91	67.11	Serine/arginine repetitive matrix protein 1-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A6P5ZW34	2.78e-39	40.69	probable transcription factor At1g61730 OS=Durio zibethinus OX=66656 GN=LOC11130...	[more]
A0A2H5MZL8	2.26e-38	36.32	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_281630 PE=3 SV=1	[more]
V4RSW9	2.65e-38	38.00	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029167mg PE=3 ...	[more]

BLAST of Cp4.1LG16g05050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007592	GLABROUS1 enhancer-binding protein family	PFAM	PF04504	DUF573	coord: 20..108 e-value: 1.3E-9 score: 38.6
IPR007592	GLABROUS1 enhancer-binding protein family	PANTHER	PTHR31662	BNAANNG10740D PROTEIN-RELATED	coord: 10..203
None	No IPR available	PANTHER	PTHR31662:SF39	SUBFAMILY NOT NAMED	coord: 10..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g05050.1	Cp4.1LG16g05050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus