Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTGGTTAGAACCAAAGAGAAGGGGTCCAGAGTGGAAACAGGGGGGATGGACAGGCCAAACCCTAGGCGGCTCTGTTTCCTCTCCACCACCTCAATTGCTCACCATTTTTGGCATTGTCATTGTCTTGCTTTGGTTTTCTCAGTCCACCACAGGCTACGACACTCAAATGCACAGGTCAGCTGCCAATTTCCAGCTGCTTCTTTTCTTGTTGCCCATCTTGGTGATTTTCTTCATGTCTTCATATTCCATGTGTGGGCTGATCAACCTTCGATCTTGGCGATCGGCAACCGGGTCGCCTCGACGAGGTGCCTCACCATTGACCATTGCCATTTTAGTTTCTCTCATTCTAGTTTTGCTTTATTTCCGCCCCTCGTTCCATTGA
mRNA sequence
ATGGAGTGGTTAGAACCAAAGAGAAGGGGTCCAGAGTGGAAACAGGGGGGATGGACAGGCCAAACCCTAGGCGGCTCTGTTTCCTCTCCACCACCTCAATTGCTCACCATTTTTGGCATTGTCATTGTCTTGCTTTGGTTTTCTCAGTCCACCACAGGCTACGACACTCAAATGCACAGGTCAGCTGCCAATTTCCAGCTGCTTCTTTTCTTGTTGCCCATCTTGGTGATTTTCTTCATGTCTTCATATTCCATGTGTGGGCTGATCAACCTTCGATCTTGGCGATCGGCAACCGGGTCGCCTCGACGAGGTGCCTCACCATTGACCATTGCCATTTTAGTTTCTCTCATTCTAGTTTTGCTTTATTTCCGCCCCTCGTTCCATTGA
Coding sequence (CDS)
ATGGAGTGGTTAGAACCAAAGAGAAGGGGTCCAGAGTGGAAACAGGGGGGATGGACAGGCCAAACCCTAGGCGGCTCTGTTTCCTCTCCACCACCTCAATTGCTCACCATTTTTGGCATTGTCATTGTCTTGCTTTGGTTTTCTCAGTCCACCACAGGCTACGACACTCAAATGCACAGGTCAGCTGCCAATTTCCAGCTGCTTCTTTTCTTGTTGCCCATCTTGGTGATTTTCTTCATGTCTTCATATTCCATGTGTGGGCTGATCAACCTTCGATCTTGGCGATCGGCAACCGGGTCGCCTCGACGAGGTGCCTCACCATTGACCATTGCCATTTTAGTTTCTCTCATTCTAGTTTTGCTTTATTTCCGCCCCTCGTTCCATTGA
Protein sequence
MEWLEPKRRGPEWKQGGWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSAANFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSPRRGASPLTIAILVSLILVLLYFRPSFH
Homology
BLAST of Cp4.1LG16g03140 vs. NCBI nr
Match:
KAG7010871.1 (hypothetical protein SDJN02_27669, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 244 bits (622), Expect = 4.46e-81
Identity = 124/128 (96.88%), Postives = 125/128 (97.66%), Query Frame = 0
Query: 1 MEWLEPKRRGPEWKQGGWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHR 60
MEWLEPKRRGPEWKQ WTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHR
Sbjct: 1 MEWLEPKRRGPEWKQ-EWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHR 60
Query: 61 SAANFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSPRRGASPLTIAILVSLILVL 120
SA+NFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSPRRGASPLTI ILVSLILVL
Sbjct: 61 SASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSPRRGASPLTITILVSLILVL 120
Query: 121 LYFRPSFH 128
LYFRPSFH
Sbjct: 121 LYFRPSFH 127
BLAST of Cp4.1LG16g03140 vs. NCBI nr
Match:
KGN61894.1 (hypothetical protein Csa_005908 [Cucumis sativus])
HSP 1 Score: 142 bits (357), Expect = 9.94e-41
Identity = 86/129 (66.67%), Postives = 95/129 (73.64%), Query Frame = 0
Query: 1 MEWLEPKRRGPEWKQG-GWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMH 60
M+ PKRRGPEWK+G TGQTL SVS PP QLL IFGIVIVLLWFSQ G++ Q++
Sbjct: 1 MDCFYPKRRGPEWKRGLTGTGQTLS-SVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLN 60
Query: 61 RSAANFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSPRRGASPLTIAILVSLILV 120
RS FQL LFLLPI VIFFM SYS LIN RS TG +RGASP TIAILV LILV
Sbjct: 61 RS---FQLFLFLLPIFVIFFMYSYSSSRLINFGFRRSPTGLAQRGASPWTIAILVLLILV 120
Query: 121 LLYFRPSFH 128
LLY++ SFH
Sbjct: 121 LLYYQSSFH 125
BLAST of Cp4.1LG16g03140 vs. NCBI nr
Match:
KAF3434655.1 (hypothetical protein FNV43_RR21740 [Rhamnella rubrinervis])
HSP 1 Score: 130 bits (327), Expect = 4.88e-36
Identity = 76/128 (59.38%), Postives = 89/128 (69.53%), Query Frame = 0
Query: 1 MEWLEPKRRGPEWKQGGWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHR 60
MEW PKRRGPEWKQ GWTGQTL S+S+PP LLTIFGIVIVLLWFSQ T GY Q+ +
Sbjct: 1 MEWFYPKRRGPEWKQ-GWTGQTLT-SISAPPLHLLTIFGIVIVLLWFSQYT-GYKAQLQQ 60
Query: 61 SAANFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSPRRGASPLTIAILVSLILVL 120
+ NFQL L +LPIL+IFFM+ YS G R R G SP +AIL+ L+LVL
Sbjct: 61 TTVNFQLFLMVLPILLIFFMALYSSSGGWFNFQLRRPEAFHRAGGSPWGVAILLVLLLVL 120
Query: 121 LYFRPSFH 128
L ++ SFH
Sbjct: 121 LSYQSSFH 125
BLAST of Cp4.1LG16g03140 vs. NCBI nr
Match:
XP_022763101.1 (uncharacterized protein LOC111308773 [Durio zibethinus])
HSP 1 Score: 129 bits (325), Expect = 9.24e-36
Identity = 75/131 (57.25%), Postives = 92/131 (70.23%), Query Frame = 0
Query: 1 MEWLEPKRRGPEWKQGGWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHR 60
MEW+ P+RRGP+WKQ GWTGQTL SVS+PP LLTIFGIV+VLLW SQ T GY ++H
Sbjct: 1 MEWVYPRRRGPQWKQ-GWTGQTLS-SVSAPPIPLLTIFGIVVVLLWLSQYT-GYKARLHH 60
Query: 61 SAANFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSP---RRGASPLTIAILVSLI 120
+A NFQL + +LPIL+IFFM S+S G L W+ R G SP IAILV ++
Sbjct: 61 TAINFQLFIIILPILLIFFMISFSSSG--RLAFWQQRLEHETVHRSGGSPWGIAILVGVL 120
Query: 121 LVLLYFRPSFH 128
LVLL ++ SFH
Sbjct: 121 LVLLCYQSSFH 126
BLAST of Cp4.1LG16g03140 vs. NCBI nr
Match:
GAV91497.1 (hypothetical protein CFOL_v3_34892 [Cephalotus follicularis])
HSP 1 Score: 128 bits (322), Expect = 2.97e-35
Identity = 74/129 (57.36%), Postives = 95/129 (73.64%), Query Frame = 0
Query: 1 MEWLEPKRRGPEWKQGGWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHR 60
MEW KRRGPEWKQ GWTGQT+ S+S+PP LLT+FGIVIVLL SQ T Y++Q+H
Sbjct: 1 MEWFYTKRRGPEWKQ-GWTGQTVA-SISTPPAALLTVFGIVIVLLLLSQYTQ-YNSQLHH 60
Query: 61 SAANFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSPRR-GASPLTIAILVSLILV 120
+A NF+L +FLLPIL+IFFM+++S G N + R G+ +R G SP +AILV L+LV
Sbjct: 61 TATNFKLSIFLLPILLIFFMAAFSSSGRYNFQLPRIGHGAMQRAGGSPWGLAILVLLVLV 120
Query: 121 LLYFRPSFH 128
LL ++ SFH
Sbjct: 121 LLSYQSSFH 126
BLAST of Cp4.1LG16g03140 vs. ExPASy TrEMBL
Match:
A0A0A0LLH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G263890 PE=4 SV=1)
HSP 1 Score: 142 bits (357), Expect = 4.81e-41
Identity = 86/129 (66.67%), Postives = 95/129 (73.64%), Query Frame = 0
Query: 1 MEWLEPKRRGPEWKQG-GWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMH 60
M+ PKRRGPEWK+G TGQTL SVS PP QLL IFGIVIVLLWFSQ G++ Q++
Sbjct: 1 MDCFYPKRRGPEWKRGLTGTGQTLS-SVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLN 60
Query: 61 RSAANFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSPRRGASPLTIAILVSLILV 120
RS FQL LFLLPI VIFFM SYS LIN RS TG +RGASP TIAILV LILV
Sbjct: 61 RS---FQLFLFLLPIFVIFFMYSYSSSRLINFGFRRSPTGLAQRGASPWTIAILVLLILV 120
Query: 121 LLYFRPSFH 128
LLY++ SFH
Sbjct: 121 LLYYQSSFH 125
BLAST of Cp4.1LG16g03140 vs. ExPASy TrEMBL
Match:
A0A6P6AE81 (uncharacterized protein LOC111308773 OS=Durio zibethinus OX=66656 GN=LOC111308773 PE=4 SV=1)
HSP 1 Score: 129 bits (325), Expect = 4.47e-36
Identity = 75/131 (57.25%), Postives = 92/131 (70.23%), Query Frame = 0
Query: 1 MEWLEPKRRGPEWKQGGWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHR 60
MEW+ P+RRGP+WKQ GWTGQTL SVS+PP LLTIFGIV+VLLW SQ T GY ++H
Sbjct: 1 MEWVYPRRRGPQWKQ-GWTGQTLS-SVSAPPIPLLTIFGIVVVLLWLSQYT-GYKARLHH 60
Query: 61 SAANFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSP---RRGASPLTIAILVSLI 120
+A NFQL + +LPIL+IFFM S+S G L W+ R G SP IAILV ++
Sbjct: 61 TAINFQLFIIILPILLIFFMISFSSSG--RLAFWQQRLEHETVHRSGGSPWGIAILVGVL 120
Query: 121 LVLLYFRPSFH 128
LVLL ++ SFH
Sbjct: 121 LVLLCYQSSFH 126
BLAST of Cp4.1LG16g03140 vs. ExPASy TrEMBL
Match:
A0A1Q3DG80 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_34892 PE=4 SV=1)
HSP 1 Score: 128 bits (322), Expect = 1.44e-35
Identity = 74/129 (57.36%), Postives = 95/129 (73.64%), Query Frame = 0
Query: 1 MEWLEPKRRGPEWKQGGWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHR 60
MEW KRRGPEWKQ GWTGQT+ S+S+PP LLT+FGIVIVLL SQ T Y++Q+H
Sbjct: 1 MEWFYTKRRGPEWKQ-GWTGQTVA-SISTPPAALLTVFGIVIVLLLLSQYTQ-YNSQLHH 60
Query: 61 SAANFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSPRR-GASPLTIAILVSLILV 120
+A NF+L +FLLPIL+IFFM+++S G N + R G+ +R G SP +AILV L+LV
Sbjct: 61 TATNFKLSIFLLPILLIFFMAAFSSSGRYNFQLPRIGHGAMQRAGGSPWGLAILVLLVLV 120
Query: 121 LLYFRPSFH 128
LL ++ SFH
Sbjct: 121 LLSYQSSFH 126
BLAST of Cp4.1LG16g03140 vs. ExPASy TrEMBL
Match:
A0A6M2F915 (Uncharacterized protein OS=Populus davidiana OX=266767 PE=4 SV=1)
HSP 1 Score: 128 bits (322), Expect = 1.48e-35
Identity = 76/130 (58.46%), Postives = 90/130 (69.23%), Query Frame = 0
Query: 1 MEWLEPKRRGPEWKQGGWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHR 60
MEW PKRRGPEWKQ GWTGQT+G SVSSPP LL IFGIVI LLW S T GY Q+H
Sbjct: 1 MEWFYPKRRGPEWKQ-GWTGQTMG-SVSSPPLPLLAIFGIVISLLWLSHYT-GYKAQLHH 60
Query: 61 SAANFQLLLFLLPILVIFFMSSYSMCGLI--NLRSWRSATGSPRRGASPLTIAILVSLIL 120
SA N Q+ L LLPIL+I FM+SYS L+ LRS + + P G+ P IAI V ++L
Sbjct: 61 SAINLQIFLVLLPILLILFMASYSTNWLLYYRLRSSQHDSDPPSSGSFPWGIAIFVVVLL 120
Query: 121 VLLYFRPSFH 128
+LL +R +FH
Sbjct: 121 MLLSYRSTFH 127
BLAST of Cp4.1LG16g03140 vs. ExPASy TrEMBL
Match:
A0A2P5C233 (Transmembrane protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_190300 PE=4 SV=1)
HSP 1 Score: 127 bits (319), Expect = 4.23e-35
Identity = 71/130 (54.62%), Postives = 92/130 (70.77%), Query Frame = 0
Query: 1 MEWLEPKRRGPEWKQGGWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHR 60
M W PKRRGP+WKQ GWT QT+ SVS+P LL IF IV+VLLW SQ T G+ Q+ +
Sbjct: 1 MGWFYPKRRGPQWKQ-GWTSQTVA-SVSAPSFHLLAIFSIVMVLLWLSQYT-GHKAQLQQ 60
Query: 61 SAANFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSPRR--GASPLTIAILVSLIL 120
+A NFQL +FLLP+L+I FM+SYS CGL N R R +P + G+SP +A+ V+L+L
Sbjct: 61 TAVNFQLFVFLLPVLLIVFMASYSSCGLFNFRFRRPRPDTPMQPAGSSPWGVAVFVALLL 120
Query: 121 VLLYFRPSFH 128
VLL ++ SFH
Sbjct: 121 VLLSYQSSFH 127
BLAST of Cp4.1LG16g03140 vs. TAIR 10
Match:
AT5G42146.1 (unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 59.7 bits (143), Expect = 2.0e-09
Identity = 43/133 (32.33%), Postives = 71/133 (53.38%), Query Frame = 0
Query: 1 MEWLEPKRRGPEWKQGGWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHR 60
M W +RRG WK+ GW +TL S S+PP LL + I+ +LL+ S S Y ++ +
Sbjct: 1 MGWFIKERRGGSWKR-GWLEETLLTS-SAPPLTLLALLAIISLLLFLS-SYPRYKYEVEK 60
Query: 61 SAANFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSPRR-----GASPLTIAILVS 120
+AAN +L + LPIL +F + S S + +S S + + G P + +++
Sbjct: 61 TAANLKLFMLFLPILFVFVLVSLSFVHRLLFKSSYSVRANQAKSLFGEGNFPWGVLLMLI 120
Query: 121 LILVLLYFRPSFH 129
L+L+L+ + FH
Sbjct: 121 LLLLLVSKQSYFH 130
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG7010871.1 | 4.46e-81 | 96.88 | hypothetical protein SDJN02_27669, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KGN61894.1 | 9.94e-41 | 66.67 | hypothetical protein Csa_005908 [Cucumis sativus] | [more] |
KAF3434655.1 | 4.88e-36 | 59.38 | hypothetical protein FNV43_RR21740 [Rhamnella rubrinervis] | [more] |
XP_022763101.1 | 9.24e-36 | 57.25 | uncharacterized protein LOC111308773 [Durio zibethinus] | [more] |
GAV91497.1 | 2.97e-35 | 57.36 | hypothetical protein CFOL_v3_34892 [Cephalotus follicularis] | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LLH8 | 4.81e-41 | 66.67 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G263890 PE=4 SV=1 | [more] |
A0A6P6AE81 | 4.47e-36 | 57.25 | uncharacterized protein LOC111308773 OS=Durio zibethinus OX=66656 GN=LOC11130877... | [more] |
A0A1Q3DG80 | 1.44e-35 | 57.36 | Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_34892 PE=4... | [more] |
A0A6M2F915 | 1.48e-35 | 58.46 | Uncharacterized protein OS=Populus davidiana OX=266767 PE=4 SV=1 | [more] |
A0A2P5C233 | 4.23e-35 | 54.62 | Transmembrane protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_190300 PE=4... | [more] |
Match Name | E-value | Identity | Description | |
AT5G42146.1 | 2.0e-09 | 32.33 | unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bac... | [more] |