Cp4.1LG16g01520 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG16g01520
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionmicrotubule-associated protein RP/EB family member 1C-like
LocationCp4.1LG16: 3521391 .. 3523806 (+)
RNA-Seq ExpressionCp4.1LG16g01520
SyntenyCp4.1LG16g01520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAGCCGACAAAGATCCCGCCGTTCTTTTCATTTTGAATTTTCCCTCTTACCTTTCTCAGCTAATAGCCGTTGTAAGCTTAATCGTATTAAACCCCCAACGCTTTTCACTTTCTTCTTCCTTCAAAACGAGGAACAATATCAATTATCACCAATCTCACCGCGCGAATCACACTTCGGAACCGGAATTCAAGGACAAAAATTGGCTTCAAGCATTCGAACCATGGATTCGGCTTACTTTGTTGGCAGATCTGAGATTCTTTCGTGGATCAATTCCACTCTCCACCTCAATCTCTCCAAAGTTGAAGAGGTTTCAATTCTATTCTCTCTCCAAATTTCTCTTCATTTTTGTTTGCTTTTTCCATCGCGATTTCATAATATTCCTGCGATTTACTGTTCTTACGAAGAATCGTTATGTTGTAGTACAGTCTTGCTCTGGTGCGATCCAGTGCCAGTTGATGGATGCGGTTCATCCAGGGATGGTGCCGATGCATAAGGTCAATTTTGATGCCAAAAGCGAGTACGAAATGATCCAGAATTATAAGCTTCTTCAAGATGTATTTAGCAAGCTCAAGATCACCAAGGTTTGATTTCCCCCAATTCTGATGGCTTTGATTCAGTTTTGATTTTGACCTAGGTCTAATGTTCTGAAACTGCGTTTTTCTTGTTCTTTATGTTCTTTGATTTCAGCATATCGAGGTTAGCAAGCTTGTGAAAGGTAGGCCACTTGATAACTTGGAATTCATGCAGTGGATGAAGTGGTACTGTGATTCCATCAACGGAGGTGTTCTACACAAGTAATTCCATCTACTTTCTTTTCCTTTCACGTTCACAAAATTATGATTCACTTGAAATTGAAGTTCTTAAGATTTTGGTTAAATCACAATTCCAAATTCCATTCGATCAACGGAGGAGTTCTACAAAATTGTTCTGTTTCTTCTCCAGTTACAACGCTTTAGAAAGGAGAGAAGCCTGCAAGGGCGGGAAAGAAGCTAGCAAGAAATTTGCAGCCTCTCAATCTTCAGCCAAGAACTCAACCACTGGATCAAGATCACATACCTCTCATAACTCAAGAAGACATGAAGCAACTTCTACTGTCAACTCTTCAAATCAATCAGGAAAAACTTCAAGGCCTTCCTCTAGCTGTGGATCACCAGTATATGATGAACAGGTAGTTCTTGTGTTACAATATGGATGTGAATTCTTTCTGTTTAGGATATCTGAACACTGTAATGATGAGAATTCCAATACGCAGATCACAGAGCTGAAACTTTCAATTGACAGCCTTGAGAAGGAAAGAGACTTTTACTTTTCAAAATTGAGGGATATTGAGATTCTGTGCCAGAGTCATGAGATACAGGACTCTAAGGTAGAAGTAGTACCCTGAGATTTACTGTCCATTTGAGCTCAATTTGAGCTGATAAACTCTGTTCTTCAGGTTGTGGGTGCAATAAAGAAGATTCTGTATGCTGGAGAAGATGATGCAGCAGTAGTGGCAGATGCTCAAGCAATGGTGTCCATGGCTACCCAGAAGGAAGCTGATACAAGAACAGAAGGGATTACAGATAATAGAGCAATTTTGGAAACTCAGAAGAGAAAAGTAATTCAAAATCATGATATTGATGCTGTGGGGATTACAACATTGTCACCCAGGCTAAGAATTTCTGGTGTTTCTGATGTTCATTGCAGTGGGTCACACCTCACGAGTTACTGATTATGGATGGAACTCTGAAACTTTCTTATATCATTTACAGTACATTTTTCTTTTGGGAGATGAAATCTGAAACTCTCTGTTTAAATGGTTTGAAGTGCTGTAGAATGTATACTTAGACACAGACGGACAATTAAAGAATGTTTTCATGGGGCTTTGGTATATAAGAGTTTTATGGCATTGGTTTTTGAATGAGTTGTATCTTCGTTTTATGGCAAAACTTGGTCACTTTATAGACTGTTCTGTTCATATAGAAATGGTGTGTTTGAACGATGAATCTGGTGTAACTTGTTTGAACATTTGTTTTTTTTGCAGTTTCAAACTGTCAAATTGATCTGCAACCATCATCGATTGACTTGGTAATCAGTATGAGTAAATATACATACATGAATCCCACGCACATGAAACCGCGGTAGCTGCAAAGCAAGAAGCCAGGCGCGTGGGAGAGCGTACAAACACGTGTGAGCGCGTGCAATCACGTGTCAAGCTCGAGTTCGTTTTATTCGACTCATTTTGACTTGTTCATATTGACCCATACTAACCTTCAAGGTTATTAAATATAGGCCAAATTACTATAGTAGGATCAAATTACCATAGGAAAGGAATTATCTTGTGTGAATGACGTGATTTAATTTGTGATATTTATGAAAGCATTTCATAGCATGCTACAAGATCGAAATGGAAATATTGTATAACTCTAGGTTAT

mRNA sequence

TGAAGCCGACAAAGATCCCGCCGTTCTTTTCATTTTGAATTTTCCCTCTTACCTTTCTCAGCTAATAGCCGTTGTAAGCTTAATCGTATTAAACCCCCAACGCTTTTCACTTTCTTCTTCCTTCAAAACGAGGAACAATATCAATTATCACCAATCTCACCGCGCGAATCACACTTCGGAACCGGAATTCAAGGACAAAAATTGGCTTCAAGCATTCGAACCATGGATTCGGCTTACTTTGTTGGCAGATCTGAGATTCTTTCGTGGATCAATTCCACTCTCCACCTCAATCTCTCCAAAGTTGAAGAGAATCGTTATGTTGTAGTACAGTCTTGCTCTGGTGCGATCCAGTGCCAGTTGATGGATGCGGTTCATCCAGGGATGGTGCCGATGCATAAGGTCAATTTTGATGCCAAAAGCGAGTACGAAATGATCCAGAATTATAAGCTTCTTCAAGATGTATTTAGCAAGCTCAAGATCACCAAGCATATCGAGGTTAGCAAGCTTGTGAAAGGTAGGCCACTTGATAACTTGGAATTCATGCAGTGGATGAAGTGGTACTGTGATTCCATCAACGGAGGTGTTCTACACAATTACAACGCTTTAGAAAGGAGAGAAGCCTGCAAGGGCGGGAAAGAAGCTAGCAAGAAATTTGCAGCCTCTCAATCTTCAGCCAAGAACTCAACCACTGGATCAAGATCACATACCTCTCATAACTCAAGAAGACATGAAGCAACTTCTACTGTCAACTCTTCAAATCAATCAGGAAAAACTTCAAGGCCTTCCTCTAGCTGTGGATCACCAGTATATGATGAACAGATCACAGAGCTGAAACTTTCAATTGACAGCCTTGAGAAGGAAAGAGACTTTTACTTTTCAAAATTGAGGGATATTGAGATTCTGTGCCAGAGTCATGAGATACAGGACTCTAAGGTTGTGGGTGCAATAAAGAAGATTCTGTATGCTGGAGAAGATGATGCAGCAGTAGTGGCAGATGCTCAAGCAATGGTGTCCATGGCTACCCAGAAGGAAGCTGATACAAGAACAGAAGGGATTACAGATAATAGAGCAATTTTGGAAACTCAGAAGAGAAAAGTAATTCAAAATCATGATATTGATGCTGTGGGGATTACAACATTGTCACCCAGGCTAAGAATTTCTGGTGTTTCTGATGTTCATTGCAGTGGGTCACACCTCACGAGTTACTGATTATGGATGGAACTCTGAAACTTTCTTATATCATTTACAGTACATTTTTCTTTTGGGAGATGAAATCTGAAACTCTCTGTTTAAATGGTTTGAAGTGCTGTAGAATGTATACTTAGACACAGACGGACAATTAAAGAATGTTTTCATGGGGCTTTGGTATATAAGAGTTTTATGGCATTGGTTTTTGAATGAGTTGTATCTTCGTTTTATGGCAAAACTTGGTCACTTTATAGACTGTTCTGTTCATATAGAAATGGTGTGTTTGAACGATGAATCTGGTGTAACTTGTTTGAACATTTGTTTTTTTTGCAGTTTCAAACTGTCAAATTGATCTGCAACCATCATCGATTGACTTGGTAATCAGTATGAGTAAATATACATACATGAATCCCACGCACATGAAACCGCGGTAGCTGCAAAGCAAGAAGCCAGGCGCGTGGGAGAGCGTACAAACACGTGTGAGCGCGTGCAATCACGTGTCAAGCTCGAGTTCGTTTTATTCGACTCATTTTGACTTGTTCATATTGACCCATACTAACCTTCAAGGTTATTAAATATAGGCCAAATTACTATAGTAGGATCAAATTACCATAGGAAAGGAATTATCTTGTGTGAATGACGTGATTTAATTTGTGATATTTATGAAAGCATTTCATAGCATGCTACAAGATCGAAATGGAAATATTGTATAACTCTAGGTTAT

Coding sequence (CDS)

ATGGATTCGGCTTACTTTGTTGGCAGATCTGAGATTCTTTCGTGGATCAATTCCACTCTCCACCTCAATCTCTCCAAAGTTGAAGAGAATCGTTATGTTGTAGTACAGTCTTGCTCTGGTGCGATCCAGTGCCAGTTGATGGATGCGGTTCATCCAGGGATGGTGCCGATGCATAAGGTCAATTTTGATGCCAAAAGCGAGTACGAAATGATCCAGAATTATAAGCTTCTTCAAGATGTATTTAGCAAGCTCAAGATCACCAAGCATATCGAGGTTAGCAAGCTTGTGAAAGGTAGGCCACTTGATAACTTGGAATTCATGCAGTGGATGAAGTGGTACTGTGATTCCATCAACGGAGGTGTTCTACACAATTACAACGCTTTAGAAAGGAGAGAAGCCTGCAAGGGCGGGAAAGAAGCTAGCAAGAAATTTGCAGCCTCTCAATCTTCAGCCAAGAACTCAACCACTGGATCAAGATCACATACCTCTCATAACTCAAGAAGACATGAAGCAACTTCTACTGTCAACTCTTCAAATCAATCAGGAAAAACTTCAAGGCCTTCCTCTAGCTGTGGATCACCAGTATATGATGAACAGATCACAGAGCTGAAACTTTCAATTGACAGCCTTGAGAAGGAAAGAGACTTTTACTTTTCAAAATTGAGGGATATTGAGATTCTGTGCCAGAGTCATGAGATACAGGACTCTAAGGTTGTGGGTGCAATAAAGAAGATTCTGTATGCTGGAGAAGATGATGCAGCAGTAGTGGCAGATGCTCAAGCAATGGTGTCCATGGCTACCCAGAAGGAAGCTGATACAAGAACAGAAGGGATTACAGATAATAGAGCAATTTTGGAAACTCAGAAGAGAAAAGTAATTCAAAATCATGATATTGATGCTGTGGGGATTACAACATTGTCACCCAGGCTAAGAATTTCTGGTGTTTCTGATGTTCATTGCAGTGGGTCACACCTCACGAGTTACTGA

Protein sequence

MDSAYFVGRSEILSWINSTLHLNLSKVEENRYVVVQSCSGAIQCQLMDAVHPGMVPMHKVNFDAKSEYEMIQNYKLLQDVFSKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGGVLHNYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSSNQSGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVVGAIKKILYAGEDDAAVVADAQAMVSMATQKEADTRTEGITDNRAILETQKRKVIQNHDIDAVGITTLSPRLRISGVSDVHCSGSHLTSY
Homology
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BLAST of Cp4.1LG16g01520 vs. ExPASy Swiss-Prot
Match: Q9FGQ6 (Microtubule-associated protein RP/EB family member 1C OS=Arabidopsis thaliana OX=3702 GN=EB1C PE=1 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 4.7e-100
Identity = 207/333 (62.16%), Postives = 251/333 (75.38%), Query Frame = 0 

Query: 1   MDSAYFVGRSEILSWINSTLHLNLSKVEENRYVVVQSCSGAIQCQLMDAVHPGMVPMHKV 60
           MDSAYFVGRSEIL+WINSTL LNLSKVEE       +CSGA+ CQLMD+VHPG VPMHKV
Sbjct: 8   MDSAYFVGRSEILAWINSTLQLNLSKVEE-------ACSGAVHCQLMDSVHPGTVPMHKV 67

Query: 61  NFDAKSEYEMIQNYKLLQDVFSKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 120
           NFDAKSEYEMIQNYK+LQDVF+KLKITKHIEVSKLVKGRPLDNLEFMQWMK YCDS+NGG
Sbjct: 68  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDSVNGG 127

Query: 121 VLHNYNALERREACKGGKEASKKFAASQSSAKNSTTGS--RSHTSHNSRRHEATSTVNSS 180
             HNY+ALERREA KGGKEA+K+ AA+Q S K+S++ +  R  +S+ +R+HE  S    +
Sbjct: 128 -QHNYHALERREASKGGKEATKRAAATQQSGKSSSSSAPPRPSSSNGTRKHEPQSNNTGT 187

Query: 181 NQSG-----KTSRPSSSCGSPV--YDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSH 240
           + S       +S+PS+    PV  YDE+ITELKL IDSLEKERDFYFSKLRD+EILCQ+ 
Sbjct: 188 HHSSTGNHHHSSKPSAKQSKPVPAYDEKITELKLYIDSLEKERDFYFSKLRDVEILCQNP 247

Query: 241 EIQDSKVVGAIKKILYAGEDDAAVVADAQAMVSMATQKEADTRTEGITDNR-AILETQKR 300
           + +   +VG+IK+ILYA + +    A+ Q +  +A         EG  + R ++ E+QKR
Sbjct: 248 DTEHLPLVGSIKRILYAADGEDVGAAETQTLSPIA---------EGSEERRNSVTESQKR 307

Query: 301 KVIQNHDIDAVGITTLSPRLRISGVSDVHCSGS 324
           K+I N D+D   ITTLSPR R+S  SDV CSGS
Sbjct: 308 KLIVNLDVDVAAITTLSPRQRLSDASDVKCSGS 323

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BLAST of Cp4.1LG16g01520 vs. ExPASy Swiss-Prot
Match: Q7XJ60 (Microtubule-associated protein RP/EB family member 1A OS=Arabidopsis thaliana OX=3702 GN=EB1A PE=1 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 4.0e-67
Identity = 150/290 (51.72%), Postives = 200/290 (68.97%), Query Frame = 0 

Query: 1   MDSAYFVGRSEILSWINSTLHLNLSKVEENRYVVVQSCSGAIQCQLMDAVHPGMVPMHKV 60
           MDSAYFVGR+EIL+WIN  LHLNLS+VEE       + SGA+QCQ++D   PG+VPMHKV
Sbjct: 8   MDSAYFVGRNEILTWINDRLHLNLSRVEE-------AASGAVQCQMLDMTFPGVVPMHKV 67

Query: 61  NFDAKSEYEMIQNYKLLQDVFSKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 120
           NFDAK+EY+MIQNYK+LQDVF+KLKITK +E+++LVKGRPLDNLEF+QW+K +CDSINGG
Sbjct: 68  NFDAKNEYDMIQNYKVLQDVFNKLKITKPLEINRLVKGRPLDNLEFLQWLKRFCDSINGG 127

Query: 121 VLH-NYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSSN 180
           +++ NYN +ERR   + GKE          S K S    +S  ++N+     +S+V  S 
Sbjct: 128 IMNENYNPVERRS--RNGKE---------RSVKGSNKIPKSLQTNNNHPPPNSSSVGLSK 187

Query: 181 QSGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVV 240
            SG  S  ++        +++ +LK+S D LEKERDFYFSKLRD+EILCQ+ E+ D  +V
Sbjct: 188 ASGPKSAKAAEV--QALSKELVDLKISTDLLEKERDFYFSKLRDVEILCQTPELDDLPIV 247

Query: 241 GAIKKILYAGEDDAAVVADAQAMVSMATQKEADTRTEGITDNRAILETQK 290
            A+KKILYA + + + + DAQ  ++ +   E D   EG   N   LE +K
Sbjct: 248 VAVKKILYATDANESALEDAQEYLNQSLGVE-DDEAEG---NGEQLEEEK 273

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BLAST of Cp4.1LG16g01520 vs. ExPASy Swiss-Prot
Match: Q9FJJ5 (Microtubule-associated protein RP/EB family member 1B OS=Arabidopsis thaliana OX=3702 GN=EB1B PE=1 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.5e-66
Identity = 143/267 (53.56%), Postives = 193/267 (72.28%), Query Frame = 0 

Query: 1   MDSAYFVGRSEILSWINSTLHLNLSKVEENRYVVVQSCSGAIQCQLMDAVHPGMVPMHKV 60
           MDSAYFVGR+EILSWIN  LHLNLS++EE       + SGA+QCQ++D   PG+VPMHKV
Sbjct: 8   MDSAYFVGRNEILSWINDRLHLNLSRIEE-------AASGAVQCQMLDMTFPGVVPMHKV 67

Query: 61  NFDAKSEYEMIQNYKLLQDVFSKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 120
           NF+AK+EYEMIQNYK++Q+VF+KLKITK +EV++LVKGRPLDNLEF+QW+K +CDSINGG
Sbjct: 68  NFEAKNEYEMIQNYKVMQEVFTKLKITKPLEVNRLVKGRPLDNLEFLQWLKRFCDSINGG 127

Query: 121 VLH-NYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSSN 180
           +++ NYN +ERR   +GG+E S K   S   +K+  T +  H    +    A      S+
Sbjct: 128 IMNENYNPVERRS--RGGREKSVK--GSSKISKSLQTNNMHHPPVATSNKPAGPKQAKSH 187

Query: 181 QSGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVV 240
             G  S  +SS       +++ +LK+S+D LEKERDFYFSKLRDIEILCQ+ E+ D  +V
Sbjct: 188 GIGGGS--NSSAEVQALSKEVEDLKVSVDLLEKERDFYFSKLRDIEILCQTPELDDLPIV 247

Query: 241 GAIKKILYAGEDDAAVVADAQAMVSMA 267
            A+KKILYA + + +V+ +AQ  ++ +
Sbjct: 248 VAVKKILYATDANESVLEEAQECLNQS 261

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BLAST of Cp4.1LG16g01520 vs. ExPASy Swiss-Prot
Match: Q9UPY8 (Microtubule-associated protein RP/EB family member 3 OS=Homo sapiens OX=9606 GN=MAPRE3 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.8e-36
Identity = 101/262 (38.55%), Postives = 143/262 (54.58%), Query Frame = 0 

Query: 7   VGRSEILSWINSTLHLNLSKVEENRYVVVQSCSGAIQCQLMDAVHPGMVPMHKVNFDAKS 66
           + R ++L+W+N +LHLN +K+E       Q CSGA  CQ MD + PG V + KV F AK 
Sbjct: 15  LSRHDMLAWVNDSLHLNYTKIE-------QLCSGAAYCQFMDMLFPGCVHLRKVKFQAKL 74

Query: 67  EYEMIQNYKLLQDVFSKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGGVLHNYN 126
           E+E I N+K+LQ  F K+ + K I V KLVKG+  DN EF+QW K + D+   G   +YN
Sbjct: 75  EHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYDG--KDYN 134

Query: 127 ALERREACKGGK---------EASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNS 186
            L  R+                 SKK   +    + S TG ++  +     + A   +  
Sbjct: 135 PLLARQGQDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPPCILR 194

Query: 187 SN-QSGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDS 246
            N  S +     +       ++Q+ +LKL++D LEKERDFYFSKLRDIE++CQ HE ++S
Sbjct: 195 KNPPSARNGGHETDAQILELNQQLVDLKLTVDGLEKERDFYFSKLRDIELICQEHESENS 254

Query: 247 KVVGAIKKILYAGEDDAAVVAD 259
            V+  I  ILYA E+  A   D
Sbjct: 255 PVISGIIGILYATEEGFAPPED 267

[Close]
BLAST of Cp4.1LG16g01520 vs. ExPASy Swiss-Prot
Match: Q6PER3 (Microtubule-associated protein RP/EB family member 3 OS=Mus musculus OX=10090 GN=Mapre3 PE=1 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.7e-36
Identity = 101/262 (38.55%), Postives = 143/262 (54.58%), Query Frame = 0 

Query: 7   VGRSEILSWINSTLHLNLSKVEENRYVVVQSCSGAIQCQLMDAVHPGMVPMHKVNFDAKS 66
           + R ++L+W+N +LHLN +K+E       Q CSGA  CQ MD + PG V + KV F AK 
Sbjct: 15  LSRHDMLAWVNDSLHLNYTKIE-------QLCSGAAYCQFMDMLFPGCVHLRKVKFQAKL 74

Query: 67  EYEMIQNYKLLQDVFSKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGGVLHNYN 126
           E+E I N+K+LQ  F K+ + K I V KLVKG+  DN EF+QW K + D+   G   +YN
Sbjct: 75  EHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYDG--KDYN 134

Query: 127 ALERREACKGGK---------EASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNS 186
            L  R+                 SKK   +    + S TG ++  +     + A   +  
Sbjct: 135 PLLARQGQDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPPCILR 194

Query: 187 SN-QSGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDS 246
            N  S +     +       ++Q+ +LKL++D LEKERDFYFSKLRDIE++CQ HE ++S
Sbjct: 195 KNPPSARNGGHEADAQILELNQQLLDLKLTVDGLEKERDFYFSKLRDIELICQEHESENS 254

Query: 247 KVVGAIKKILYAGEDDAAVVAD 259
            V+  I  ILYA E+  A   D
Sbjct: 255 PVISGIIGILYATEEGFAPPED 267

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BLAST of Cp4.1LG16g01520 vs. NCBI nr
Match: XP_023513246.1 (microtubule-associated protein RP/EB family member 1C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 616 bits (1588), Expect = 1.14e-220
Identity = 321/328 (97.87%), Postives = 321/328 (97.87%), Query Frame = 0 

Query: 1   MDSAYFVGRSEILSWINSTLHLNLSKVEENRYVVVQSCSGAIQCQLMDAVHPGMVPMHKV 60
           MDSAYFVGRSEILSWINSTLHLNLSKVEE       SCSGAIQCQLMDAVHPGMVPMHKV
Sbjct: 72  MDSAYFVGRSEILSWINSTLHLNLSKVEE-------SCSGAIQCQLMDAVHPGMVPMHKV 131

Query: 61  NFDAKSEYEMIQNYKLLQDVFSKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 120
           NFDAKSEYEMIQNYKLLQDVFSKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG
Sbjct: 132 NFDAKSEYEMIQNYKLLQDVFSKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 191

Query: 121 VLHNYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSSNQ 180
           VLHNYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSSNQ
Sbjct: 192 VLHNYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSSNQ 251

Query: 181 SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVVG 240
           SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVVG
Sbjct: 252 SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVVG 311

Query: 241 AIKKILYAGEDDAAVVADAQAMVSMATQKEADTRTEGITDNRAILETQKRKVIQNHDIDA 300
           AIKKILYAGEDDAAVVADAQAMVSMATQKEADTRTEGITDNRAILETQKRKVIQNHDIDA
Sbjct: 312 AIKKILYAGEDDAAVVADAQAMVSMATQKEADTRTEGITDNRAILETQKRKVIQNHDIDA 371

Query: 301 VGITTLSPRLRISGVSDVHCSGSHLTSY 328
           VGITTLSPRLRISGVSDVHCSGSHLTSY
Sbjct: 372 VGITTLSPRLRISGVSDVHCSGSHLTSY 392

[Close]
BLAST of Cp4.1LG16g01520 vs. NCBI nr
Match: KAG6571233.1 (Microtubule-associated protein RP/EB family member 1C, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 606 bits (1562), Expect = 7.57e-218
Identity = 315/328 (96.04%), Postives = 319/328 (97.26%), Query Frame = 0 

Query: 1   MDSAYFVGRSEILSWINSTLHLNLSKVEENRYVVVQSCSGAIQCQLMDAVHPGMVPMHKV 60
           MDSAYFVGRSEILSWINSTLHLNL+KVEE       SCSGAIQCQLMDAVHPGMVPMHKV
Sbjct: 1   MDSAYFVGRSEILSWINSTLHLNLTKVEE-------SCSGAIQCQLMDAVHPGMVPMHKV 60

Query: 61  NFDAKSEYEMIQNYKLLQDVFSKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 120
           NFDAKSEYEMIQNYK+LQDVFSKLKITKHIEV+KLVKGRPLDNLEFMQWMKWYCDSINGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFSKLKITKHIEVTKLVKGRPLDNLEFMQWMKWYCDSINGG 120

Query: 121 VLHNYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSSNQ 180
           VLHNYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSSNQ
Sbjct: 121 VLHNYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSSNQ 180

Query: 181 SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVVG 240
           SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVV 
Sbjct: 181 SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVVS 240

Query: 241 AIKKILYAGEDDAAVVADAQAMVSMATQKEADTRTEGITDNRAILETQKRKVIQNHDIDA 300
           AIKKILYAGEDDAAVVADAQAMVSMATQKEA+TRTEGITDNRA LETQKRKVIQNHDIDA
Sbjct: 241 AIKKILYAGEDDAAVVADAQAMVSMATQKEAETRTEGITDNRANLETQKRKVIQNHDIDA 300

Query: 301 VGITTLSPRLRISGVSDVHCSGSHLTSY 328
           VGITTLSPRLRISGVSDVHCSGSHLTSY
Sbjct: 301 VGITTLSPRLRISGVSDVHCSGSHLTSY 321

[Close]
BLAST of Cp4.1LG16g01520 vs. NCBI nr
Match: XP_022944028.1 (microtubule-associated protein RP/EB family member 1C-like [Cucurbita moschata])

HSP 1 Score: 603 bits (1556), Expect = 2.65e-215
Identity = 314/328 (95.73%), Postives = 319/328 (97.26%), Query Frame = 0 

Query: 1   MDSAYFVGRSEILSWINSTLHLNLSKVEENRYVVVQSCSGAIQCQLMDAVHPGMVPMHKV 60
           MDSAYFVGRSEILSWINSTLHLNLSKVEE       SCSGAIQCQLMDAVHPGMVPMHKV
Sbjct: 103 MDSAYFVGRSEILSWINSTLHLNLSKVEE-------SCSGAIQCQLMDAVHPGMVPMHKV 162

Query: 61  NFDAKSEYEMIQNYKLLQDVFSKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 120
           NFDAKSEYEMIQNYK+LQDVFSKLKITKHIEV+KLVKGRPLDNLEF+QWMKWYCDSINGG
Sbjct: 163 NFDAKSEYEMIQNYKVLQDVFSKLKITKHIEVTKLVKGRPLDNLEFIQWMKWYCDSINGG 222

Query: 121 VLHNYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSSNQ 180
           VLHNYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTV+SSNQ
Sbjct: 223 VLHNYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVSSSNQ 282

Query: 181 SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVVG 240
           SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVV 
Sbjct: 283 SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVVS 342

Query: 241 AIKKILYAGEDDAAVVADAQAMVSMATQKEADTRTEGITDNRAILETQKRKVIQNHDIDA 300
           AIKKILYAGEDDAAVVADAQAMVSMATQKEA+TRTEGITDNRA LETQKRKVIQNHDIDA
Sbjct: 343 AIKKILYAGEDDAAVVADAQAMVSMATQKEAETRTEGITDNRANLETQKRKVIQNHDIDA 402

Query: 301 VGITTLSPRLRISGVSDVHCSGSHLTSY 328
           VGITTLSPRLRISGVSDVHCSGSHLTSY
Sbjct: 403 VGITTLSPRLRISGVSDVHCSGSHLTSY 423

[Close]
BLAST of Cp4.1LG16g01520 vs. NCBI nr
Match: XP_022985807.1 (microtubule-associated protein RP/EB family member 1C-like, partial [Cucurbita maxima])

HSP 1 Score: 585 bits (1508), Expect = 4.85e-209
Identity = 307/328 (93.60%), Postives = 312/328 (95.12%), Query Frame = 0 

Query: 1   MDSAYFVGRSEILSWINSTLHLNLSKVEENRYVVVQSCSGAIQCQLMDAVHPGMVPMHKV 60
           MDSAYFVGRSEILSWINSTLHLNLSKVEE       SCSGAIQCQLMDAVHPGMVPMHKV
Sbjct: 37  MDSAYFVGRSEILSWINSTLHLNLSKVEE-------SCSGAIQCQLMDAVHPGMVPMHKV 96

Query: 61  NFDAKSEYEMIQNYKLLQDVFSKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 120
           NFDAKSEYEMIQNYK+LQDV +KLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG
Sbjct: 97  NFDAKSEYEMIQNYKVLQDVLNKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 156

Query: 121 VLHNYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSSNQ 180
           VLHNYNALERR+ACKGGKEASKK AASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSS+Q
Sbjct: 157 VLHNYNALERRDACKGGKEASKKSAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSSSQ 216

Query: 181 SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVVG 240
           SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVV 
Sbjct: 217 SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVVS 276

Query: 241 AIKKILYAGEDDAAVVADAQAMVSMATQKEADTRTEGITDNRAILETQKRKVIQNHDIDA 300
           AIKKILYAGEDDA+VVADAQAMVSMATQKEA TRTEGI D R  LETQKRKVIQN DIDA
Sbjct: 277 AIKKILYAGEDDASVVADAQAMVSMATQKEAVTRTEGIADKRENLETQKRKVIQNLDIDA 336

Query: 301 VGITTLSPRLRISGVSDVHCSGSHLTSY 328
           VGITTLSPRLRISGVSDVHCSGSHLTSY
Sbjct: 337 VGITTLSPRLRISGVSDVHCSGSHLTSY 357

[Close]
BLAST of Cp4.1LG16g01520 vs. NCBI nr
Match: XP_038902172.1 (microtubule-associated protein RP/EB family member 1C-like [Benincasa hispida])

HSP 1 Score: 533 bits (1373), Expect = 5.48e-189
Identity = 281/328 (85.67%), Postives = 299/328 (91.16%), Query Frame = 0 

Query: 1   MDSAYFVGRSEILSWINSTLHLNLSKVEENRYVVVQSCSGAIQCQLMDAVHPGMVPMHKV 60
           MDSAYFVGRSEILSWINSTLHLNLSKVEE       SCSGA+QCQLMDAVHPGMVPMHKV
Sbjct: 8   MDSAYFVGRSEILSWINSTLHLNLSKVEE-------SCSGAVQCQLMDAVHPGMVPMHKV 67

Query: 61  NFDAKSEYEMIQNYKLLQDVFSKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 120
           NFDAKSEYEMIQNYK+LQDVF+KLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG
Sbjct: 68  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 127

Query: 121 VLHNYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSSNQ 180
           VLHNYNALERREACKGGKEASKKFAASQSS+KNS   SRS TS N+RR+E T+ VNS+NQ
Sbjct: 128 VLHNYNALERREACKGGKEASKKFAASQSSSKNSVATSRSQTSQNARRNEVTANVNSANQ 187

Query: 181 SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVVG 240
           SGKTSRPSSS G+ VYDEQITELKLSIDSLEKERDFYF+KLRDIEILCQSHEIQDS VV 
Sbjct: 188 SGKTSRPSSSSGAAVYDEQITELKLSIDSLEKERDFYFAKLRDIEILCQSHEIQDSNVVR 247

Query: 241 AIKKILYAGEDDAAVVADAQAMVSMATQKEADTRTEGITDNRAILETQKRKVIQNHDIDA 300
           AIKKILYAGEDDA+VV +AQAMVSMATQKE +TR++GI+ N   LETQKRK IQN D+DA
Sbjct: 248 AIKKILYAGEDDASVVVEAQAMVSMATQKEGETRSQGISAN---LETQKRKNIQNLDVDA 307

Query: 301 VGITTLSPRLRISGVSDVHCSGSHLTSY 328
           VGITTLSPR RISGVSDVHCSGS L +Y
Sbjct: 308 VGITTLSPRQRISGVSDVHCSGSPLLTY 325

[Close]
BLAST of Cp4.1LG16g01520 vs. ExPASy TrEMBL
Match: A0A6J1FXL6 (microtubule-associated protein RP/EB family member 1C-like OS=Cucurbita moschata OX=3662 GN=LOC111448579 PE=3 SV=1)

HSP 1 Score: 603 bits (1556), Expect = 1.29e-215
Identity = 314/328 (95.73%), Postives = 319/328 (97.26%), Query Frame = 0 

Query: 1   MDSAYFVGRSEILSWINSTLHLNLSKVEENRYVVVQSCSGAIQCQLMDAVHPGMVPMHKV 60
           MDSAYFVGRSEILSWINSTLHLNLSKVEE       SCSGAIQCQLMDAVHPGMVPMHKV
Sbjct: 103 MDSAYFVGRSEILSWINSTLHLNLSKVEE-------SCSGAIQCQLMDAVHPGMVPMHKV 162

Query: 61  NFDAKSEYEMIQNYKLLQDVFSKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 120
           NFDAKSEYEMIQNYK+LQDVFSKLKITKHIEV+KLVKGRPLDNLEF+QWMKWYCDSINGG
Sbjct: 163 NFDAKSEYEMIQNYKVLQDVFSKLKITKHIEVTKLVKGRPLDNLEFIQWMKWYCDSINGG 222

Query: 121 VLHNYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSSNQ 180
           VLHNYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTV+SSNQ
Sbjct: 223 VLHNYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVSSSNQ 282

Query: 181 SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVVG 240
           SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVV 
Sbjct: 283 SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVVS 342

Query: 241 AIKKILYAGEDDAAVVADAQAMVSMATQKEADTRTEGITDNRAILETQKRKVIQNHDIDA 300
           AIKKILYAGEDDAAVVADAQAMVSMATQKEA+TRTEGITDNRA LETQKRKVIQNHDIDA
Sbjct: 343 AIKKILYAGEDDAAVVADAQAMVSMATQKEAETRTEGITDNRANLETQKRKVIQNHDIDA 402

Query: 301 VGITTLSPRLRISGVSDVHCSGSHLTSY 328
           VGITTLSPRLRISGVSDVHCSGSHLTSY
Sbjct: 403 VGITTLSPRLRISGVSDVHCSGSHLTSY 423

[Close]
BLAST of Cp4.1LG16g01520 vs. ExPASy TrEMBL
Match: A0A6J1J5X3 (microtubule-associated protein RP/EB family member 1C-like OS=Cucurbita maxima OX=3661 GN=LOC111483746 PE=3 SV=1)

HSP 1 Score: 585 bits (1508), Expect = 2.35e-209
Identity = 307/328 (93.60%), Postives = 312/328 (95.12%), Query Frame = 0 

Query: 1   MDSAYFVGRSEILSWINSTLHLNLSKVEENRYVVVQSCSGAIQCQLMDAVHPGMVPMHKV 60
           MDSAYFVGRSEILSWINSTLHLNLSKVEE       SCSGAIQCQLMDAVHPGMVPMHKV
Sbjct: 37  MDSAYFVGRSEILSWINSTLHLNLSKVEE-------SCSGAIQCQLMDAVHPGMVPMHKV 96

Query: 61  NFDAKSEYEMIQNYKLLQDVFSKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 120
           NFDAKSEYEMIQNYK+LQDV +KLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG
Sbjct: 97  NFDAKSEYEMIQNYKVLQDVLNKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 156

Query: 121 VLHNYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSSNQ 180
           VLHNYNALERR+ACKGGKEASKK AASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSS+Q
Sbjct: 157 VLHNYNALERRDACKGGKEASKKSAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSSSQ 216

Query: 181 SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVVG 240
           SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVV 
Sbjct: 217 SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVVS 276

Query: 241 AIKKILYAGEDDAAVVADAQAMVSMATQKEADTRTEGITDNRAILETQKRKVIQNHDIDA 300
           AIKKILYAGEDDA+VVADAQAMVSMATQKEA TRTEGI D R  LETQKRKVIQN DIDA
Sbjct: 277 AIKKILYAGEDDASVVADAQAMVSMATQKEAVTRTEGIADKRENLETQKRKVIQNLDIDA 336

Query: 301 VGITTLSPRLRISGVSDVHCSGSHLTSY 328
           VGITTLSPRLRISGVSDVHCSGSHLTSY
Sbjct: 337 VGITTLSPRLRISGVSDVHCSGSHLTSY 357

[Close]
BLAST of Cp4.1LG16g01520 vs. ExPASy TrEMBL
Match: A0A5D3BNY9 (Microtubule-associated protein RP/EB family member 1C isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00200 PE=3 SV=1)

HSP 1 Score: 520 bits (1340), Expect = 2.81e-184
Identity = 276/328 (84.15%), Postives = 294/328 (89.63%), Query Frame = 0 

Query: 1   MDSAYFVGRSEILSWINSTLHLNLSKVEENRYVVVQSCSGAIQCQLMDAVHPGMVPMHKV 60
           MDSAYFVGRSEILSWINSTLHLNLSKVEE       SCSGA+QCQLMDAVHPGMV MHKV
Sbjct: 8   MDSAYFVGRSEILSWINSTLHLNLSKVEE-------SCSGAVQCQLMDAVHPGMVSMHKV 67

Query: 61  NFDAKSEYEMIQNYKLLQDVFSKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 120
           NFDAKSEYEMIQNYK+LQDVF+KLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG
Sbjct: 68  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 127

Query: 121 VLHNYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSSNQ 180
           VLHNYNA ERREACKGGKEASKKFAASQSSAKNS   SRS TS N+RR+EAT+++NS+NQ
Sbjct: 128 VLHNYNASERREACKGGKEASKKFAASQSSAKNSVATSRSQTSQNARRNEATASINSANQ 187

Query: 181 SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVVG 240
           S K SRPSSS G+ VYDEQITELKLSIDSLEKERDFYF+KLRDIEILCQSHEIQDS VV 
Sbjct: 188 SAKASRPSSSNGAAVYDEQITELKLSIDSLEKERDFYFAKLRDIEILCQSHEIQDSNVVR 247

Query: 241 AIKKILYAGEDDAAVVADAQAMVSMATQKEADTRTEGITDNRAILETQKRKVIQNHDIDA 300
           AIKKILYAGEDDA+VV +AQAMVSMA QKE  T TEGI+ N   +ETQKRK IQN D+DA
Sbjct: 248 AIKKILYAGEDDASVVVEAQAMVSMAAQKEGKTTTEGISAN---METQKRKNIQNLDVDA 307

Query: 301 VGITTLSPRLRISGVSDVHCSGSHLTSY 328
           VGI+TLSPR RISGVSDVHCSGS L +Y
Sbjct: 308 VGISTLSPRQRISGVSDVHCSGSPLMTY 325

[Close]
BLAST of Cp4.1LG16g01520 vs. ExPASy TrEMBL
Match: A0A1S3CJF8 (microtubule-associated protein RP/EB family member 1C isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501121 PE=3 SV=1)

HSP 1 Score: 520 bits (1340), Expect = 2.81e-184
Identity = 276/328 (84.15%), Postives = 294/328 (89.63%), Query Frame = 0 

Query: 1   MDSAYFVGRSEILSWINSTLHLNLSKVEENRYVVVQSCSGAIQCQLMDAVHPGMVPMHKV 60
           MDSAYFVGRSEILSWINSTLHLNLSKVEE       SCSGA+QCQLMDAVHPGMV MHKV
Sbjct: 8   MDSAYFVGRSEILSWINSTLHLNLSKVEE-------SCSGAVQCQLMDAVHPGMVSMHKV 67

Query: 61  NFDAKSEYEMIQNYKLLQDVFSKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 120
           NFDAKSEYEMIQNYK+LQDVF+KLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG
Sbjct: 68  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 127

Query: 121 VLHNYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSSNQ 180
           VLHNYNA ERREACKGGKEASKKFAASQSSAKNS   SRS TS N+RR+EAT+++NS+NQ
Sbjct: 128 VLHNYNASERREACKGGKEASKKFAASQSSAKNSVATSRSQTSQNARRNEATASINSANQ 187

Query: 181 SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVVG 240
           S K SRPSSS G+ VYDEQITELKLSIDSLEKERDFYF+KLRDIEILCQSHEIQDS VV 
Sbjct: 188 SAKASRPSSSNGAAVYDEQITELKLSIDSLEKERDFYFAKLRDIEILCQSHEIQDSNVVR 247

Query: 241 AIKKILYAGEDDAAVVADAQAMVSMATQKEADTRTEGITDNRAILETQKRKVIQNHDIDA 300
           AIKKILYAGEDDA+VV +AQAMVSMA QKE  T TEGI+ N   +ETQKRK IQN D+DA
Sbjct: 248 AIKKILYAGEDDASVVVEAQAMVSMAAQKEGKTTTEGISAN---METQKRKNIQNLDVDA 307

Query: 301 VGITTLSPRLRISGVSDVHCSGSHLTSY 328
           VGI+TLSPR RISGVSDVHCSGS L +Y
Sbjct: 308 VGISTLSPRQRISGVSDVHCSGSPLMTY 325

[Close]
BLAST of Cp4.1LG16g01520 vs. ExPASy TrEMBL
Match: A0A6J1D5R4 (microtubule-associated protein RP/EB family member 1C-like OS=Momordica charantia OX=3673 GN=LOC111017878 PE=3 SV=1)

HSP 1 Score: 510 bits (1314), Expect = 3.18e-180
Identity = 270/331 (81.57%), Postives = 290/331 (87.61%), Query Frame = 0 

Query: 1   MDSAYFVGRSEILSWINSTLHLNLSKVEENRYVVVQSCSGAIQCQLMDAVHPGMVPMHKV 60
           MDSAYFVGRSEILSWINSTLHLNLSKVEE       SCSGA+QCQLMDAVHPGMVPMHKV
Sbjct: 8   MDSAYFVGRSEILSWINSTLHLNLSKVEE-------SCSGAVQCQLMDAVHPGMVPMHKV 67

Query: 61  NFDAKSEYEMIQNYKLLQDVFSKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 120
           NFDAKSEYEMIQNYK+LQDVF+KLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSI+GG
Sbjct: 68  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSIHGG 127

Query: 121 VLHNYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSSNQ 180
           VLHNYNALERRE CKGG+EASKKFAASQ SAK S   SRS TSHN+RR+E  +TVNS+NQ
Sbjct: 128 VLHNYNALERREFCKGGREASKKFAASQPSAKGSMAASRSQTSHNARRNEVPATVNSANQ 187

Query: 181 SGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVVG 240
           SGKTSRPSSSCG+ VYDE+ITELKLSIDSLEKERDFYF+KLRDIEILCQS EIQDS VV 
Sbjct: 188 SGKTSRPSSSCGAAVYDEKITELKLSIDSLEKERDFYFAKLRDIEILCQSREIQDSNVVS 247

Query: 241 AIKKILYAGEDDAAVVADAQAMVSMATQKEADTRTEG---ITDNRAILETQKRKVIQNHD 300
           AIK+ILYAGEDDA+VVA+AQ MV + TQ EA   TE    I+D R+  ETQKRK I N D
Sbjct: 248 AIKRILYAGEDDASVVAEAQEMVVITTQNEAKETTETAEEISDERSSFETQKRKNILNLD 307

Query: 301 IDAVGITTLSPRLRISGVSDVHCSGSHLTSY 328
           +DAVGIT LSPR RISGVSDVHCSGS L +Y
Sbjct: 308 VDAVGITALSPRQRISGVSDVHCSGSPLMTY 331

[Close]
BLAST of Cp4.1LG16g01520 vs. TAIR 10
Match: AT5G67270.1 (end binding protein 1C )

HSP 1 Score: 365.9 bits (938), Expect = 3.3e-101
Identity = 207/333 (62.16%), Postives = 251/333 (75.38%), Query Frame = 0 

Query: 1   MDSAYFVGRSEILSWINSTLHLNLSKVEENRYVVVQSCSGAIQCQLMDAVHPGMVPMHKV 60
           MDSAYFVGRSEIL+WINSTL LNLSKVEE       +CSGA+ CQLMD+VHPG VPMHKV
Sbjct: 8   MDSAYFVGRSEILAWINSTLQLNLSKVEE-------ACSGAVHCQLMDSVHPGTVPMHKV 67

Query: 61  NFDAKSEYEMIQNYKLLQDVFSKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 120
           NFDAKSEYEMIQNYK+LQDVF+KLKITKHIEVSKLVKGRPLDNLEFMQWMK YCDS+NGG
Sbjct: 68  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDSVNGG 127

Query: 121 VLHNYNALERREACKGGKEASKKFAASQSSAKNSTTGS--RSHTSHNSRRHEATSTVNSS 180
             HNY+ALERREA KGGKEA+K+ AA+Q S K+S++ +  R  +S+ +R+HE  S    +
Sbjct: 128 -QHNYHALERREASKGGKEATKRAAATQQSGKSSSSSAPPRPSSSNGTRKHEPQSNNTGT 187

Query: 181 NQSG-----KTSRPSSSCGSPV--YDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSH 240
           + S       +S+PS+    PV  YDE+ITELKL IDSLEKERDFYFSKLRD+EILCQ+ 
Sbjct: 188 HHSSTGNHHHSSKPSAKQSKPVPAYDEKITELKLYIDSLEKERDFYFSKLRDVEILCQNP 247

Query: 241 EIQDSKVVGAIKKILYAGEDDAAVVADAQAMVSMATQKEADTRTEGITDNR-AILETQKR 300
           + +   +VG+IK+ILYA + +    A+ Q +  +A         EG  + R ++ E+QKR
Sbjct: 248 DTEHLPLVGSIKRILYAADGEDVGAAETQTLSPIA---------EGSEERRNSVTESQKR 307

Query: 301 KVIQNHDIDAVGITTLSPRLRISGVSDVHCSGS 324
           K+I N D+D   ITTLSPR R+S  SDV CSGS
Sbjct: 308 KLIVNLDVDVAAITTLSPRQRLSDASDVKCSGS 323

[Close]
BLAST of Cp4.1LG16g01520 vs. TAIR 10
Match: AT3G47690.1 (microtubule end binding protein EB1A )

HSP 1 Score: 256.5 bits (654), Expect = 2.8e-68
Identity = 150/290 (51.72%), Postives = 200/290 (68.97%), Query Frame = 0 

Query: 1   MDSAYFVGRSEILSWINSTLHLNLSKVEENRYVVVQSCSGAIQCQLMDAVHPGMVPMHKV 60
           MDSAYFVGR+EIL+WIN  LHLNLS+VEE       + SGA+QCQ++D   PG+VPMHKV
Sbjct: 8   MDSAYFVGRNEILTWINDRLHLNLSRVEE-------AASGAVQCQMLDMTFPGVVPMHKV 67

Query: 61  NFDAKSEYEMIQNYKLLQDVFSKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 120
           NFDAK+EY+MIQNYK+LQDVF+KLKITK +E+++LVKGRPLDNLEF+QW+K +CDSINGG
Sbjct: 68  NFDAKNEYDMIQNYKVLQDVFNKLKITKPLEINRLVKGRPLDNLEFLQWLKRFCDSINGG 127

Query: 121 VLH-NYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSSN 180
           +++ NYN +ERR   + GKE          S K S    +S  ++N+     +S+V  S 
Sbjct: 128 IMNENYNPVERRS--RNGKE---------RSVKGSNKIPKSLQTNNNHPPPNSSSVGLSK 187

Query: 181 QSGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVV 240
            SG  S  ++        +++ +LK+S D LEKERDFYFSKLRD+EILCQ+ E+ D  +V
Sbjct: 188 ASGPKSAKAAEV--QALSKELVDLKISTDLLEKERDFYFSKLRDVEILCQTPELDDLPIV 247

Query: 241 GAIKKILYAGEDDAAVVADAQAMVSMATQKEADTRTEGITDNRAILETQK 290
            A+KKILYA + + + + DAQ  ++ +   E D   EG   N   LE +K
Sbjct: 248 VAVKKILYATDANESALEDAQEYLNQSLGVE-DDEAEG---NGEQLEEEK 273

[Close]
BLAST of Cp4.1LG16g01520 vs. TAIR 10
Match: AT5G62500.1 (end binding protein 1B )

HSP 1 Score: 254.6 bits (649), Expect = 1.1e-67
Identity = 143/267 (53.56%), Postives = 193/267 (72.28%), Query Frame = 0 

Query: 1   MDSAYFVGRSEILSWINSTLHLNLSKVEENRYVVVQSCSGAIQCQLMDAVHPGMVPMHKV 60
           MDSAYFVGR+EILSWIN  LHLNLS++EE       + SGA+QCQ++D   PG+VPMHKV
Sbjct: 8   MDSAYFVGRNEILSWINDRLHLNLSRIEE-------AASGAVQCQMLDMTFPGVVPMHKV 67

Query: 61  NFDAKSEYEMIQNYKLLQDVFSKLKITKHIEVSKLVKGRPLDNLEFMQWMKWYCDSINGG 120
           NF+AK+EYEMIQNYK++Q+VF+KLKITK +EV++LVKGRPLDNLEF+QW+K +CDSINGG
Sbjct: 68  NFEAKNEYEMIQNYKVMQEVFTKLKITKPLEVNRLVKGRPLDNLEFLQWLKRFCDSINGG 127

Query: 121 VLH-NYNALERREACKGGKEASKKFAASQSSAKNSTTGSRSHTSHNSRRHEATSTVNSSN 180
           +++ NYN +ERR   +GG+E S K   S   +K+  T +  H    +    A      S+
Sbjct: 128 IMNENYNPVERRS--RGGREKSVK--GSSKISKSLQTNNMHHPPVATSNKPAGPKQAKSH 187

Query: 181 QSGKTSRPSSSCGSPVYDEQITELKLSIDSLEKERDFYFSKLRDIEILCQSHEIQDSKVV 240
             G  S  +SS       +++ +LK+S+D LEKERDFYFSKLRDIEILCQ+ E+ D  +V
Sbjct: 188 GIGGGS--NSSAEVQALSKEVEDLKVSVDLLEKERDFYFSKLRDIEILCQTPELDDLPIV 247

Query: 241 GAIKKILYAGEDDAAVVADAQAMVSMA 267
            A+KKILYA + + +V+ +AQ  ++ +
Sbjct: 248 VAVKKILYATDANESVLEEAQECLNQS 261

The following BLAST results are available for this feature:
BLAST of Cp4.1LG16g01520 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FGQ64.7e-10062.16Microtubule-associated protein RP/EB family member 1C OS=Arabidopsis thaliana OX... [more]
Q7XJ604.0e-6751.72Microtubule-associated protein RP/EB family member 1A OS=Arabidopsis thaliana OX... [more]
Q9FJJ51.5e-6653.56Microtubule-associated protein RP/EB family member 1B OS=Arabidopsis thaliana OX... [more]
Q9UPY82.8e-3638.55Microtubule-associated protein RP/EB family member 3 OS=Homo sapiens OX=9606 GN=... [more]
Q6PER33.7e-3638.55Microtubule-associated protein RP/EB family member 3 OS=Mus musculus OX=10090 GN... [more]
BLAST of Cp4.1LG16g01520 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023513246.11.14e-22097.87microtubule-associated protein RP/EB family member 1C-like [Cucurbita pepo subsp... [more]
KAG6571233.17.57e-21896.04Microtubule-associated protein RP/EB family member 1C, partial [Cucurbita argyro... [more]
XP_022944028.12.65e-21595.73microtubule-associated protein RP/EB family member 1C-like [Cucurbita moschata][more]
XP_022985807.14.85e-20993.60microtubule-associated protein RP/EB family member 1C-like, partial [Cucurbita m... [more]
XP_038902172.15.48e-18985.67microtubule-associated protein RP/EB family member 1C-like [Benincasa hispida][more]
BLAST of Cp4.1LG16g01520 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FXL61.29e-21595.73microtubule-associated protein RP/EB family member 1C-like OS=Cucurbita moschata... [more]
A0A6J1J5X32.35e-20993.60microtubule-associated protein RP/EB family member 1C-like OS=Cucurbita maxima O... [more]
A0A5D3BNY92.81e-18484.15Microtubule-associated protein RP/EB family member 1C isoform X2 OS=Cucumis melo... [more]
A0A1S3CJF82.81e-18484.15microtubule-associated protein RP/EB family member 1C isoform X2 OS=Cucumis melo... [more]
A0A6J1D5R43.18e-18081.57microtubule-associated protein RP/EB family member 1C-like OS=Momordica charanti... [more]
BLAST of Cp4.1LG16g01520 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G67270.13.3e-10162.16end binding protein 1C [more]
AT3G47690.12.8e-6851.72microtubule end binding protein EB1A [more]
AT5G62500.11.1e-6753.56end binding protein 1B [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004953EB1, C-terminalPFAMPF03271EB1coord: 210..248
e-value: 2.8E-19
score: 69.1
IPR004953EB1, C-terminalPROSITEPS51230EB1_Ccoord: 185..255
score: 15.466528
IPR001715Calponin homology domainPFAMPF00307CHcoord: 9..107
e-value: 6.2E-11
score: 42.4
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 6..115
score: 19.026836
IPR036872CH domain superfamilyGENE3D1.10.418.10coord: 1..133
e-value: 6.1E-49
score: 167.4
IPR036872CH domain superfamilySUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 1..131
NoneNo IPR availableGENE3D1.20.5.1430coord: 195..272
e-value: 1.8E-23
score: 84.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..161
NoneNo IPR availablePANTHERPTHR10623:SF29MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1Bcoord: 1..272
IPR027328Microtubule-associated protein RP/EBPANTHERPTHR10623MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBERcoord: 1..272
IPR036133EB1, C-terminal domain superfamilySUPERFAMILY140612EB1 dimerisation domain-likecoord: 196..253

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG16g01520.1Cp4.1LG16g01520.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051301 cell division
biological_process GO:1904825 protein localization to microtubule plus-end
biological_process GO:0031110 regulation of microtubule polymerization or depolymerization
biological_process GO:0051225 spindle assembly
biological_process GO:0009652 thigmotropism
cellular_component GO:0005881 cytoplasmic microtubule
cellular_component GO:0005815 microtubule organizing center
cellular_component GO:0035371 microtubule plus-end
cellular_component GO:0051233 spindle midzone
molecular_function GO:0051010 microtubule plus-end binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0005515 protein binding