Homology
BLAST of Cp4.1LG15g07100 vs. ExPASy Swiss-Prot
Match:
Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)
HSP 1 Score: 103.6 bits (257), Expect = 2.3e-21
Identity = 57/154 (37.01%), Postives = 90/154 (58.44%), Query Frame = 0
Query: 16 PCNLHFPLQSCETEREAKQFHALSLKTGSLNHPSISPRLLALYANPRIN--NLEYAQSLF 75
P +L + +C T R+ Q HA+ +K+G + + +L A ++ +L+YA +F
Sbjct: 23 PSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIF 82
Query: 76 DWIRKPTLVSWNMLIKCYIENQRSND--AIALFCKLLC-EFM-PDSFTLPCVLKGCARLS 135
+ + + SWN +I+ + E+ AI LF +++ EF+ P+ FT P VLK CA+
Sbjct: 83 NQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTG 142
Query: 136 ALQEGKQIHGLIVKIGIGVDKFVLSSLVNMYSKC 164
+QEGKQIHGL +K G G D+FV+S+LV MY C
Sbjct: 143 KIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMC 176
BLAST of Cp4.1LG15g07100 vs. ExPASy Swiss-Prot
Match:
Q9C6T2 (Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H11 PE=2 SV=1)
HSP 1 Score: 95.1 bits (235), Expect = 8.0e-19
Identity = 54/151 (35.76%), Postives = 83/151 (54.97%), Query Frame = 0
Query: 23 LQSCETEREAKQFHALSLKTGSLNHPSIS-PRLLALYANPR-INNLEYAQSLFDWIRKPT 82
L+ C E KQ HA +K S S +LA A+ N++ YA S+F I P
Sbjct: 37 LKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPC 96
Query: 83 LVSWNMLIKCYIENQRSNDAIALFCKLLCE-FMPDSFTLPCVLKGCARLSALQEGKQIHG 142
+N +I+ Y+ +A+ + +++ PD+FT PC+LK C RL +++EGKQIHG
Sbjct: 97 TFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHG 156
Query: 143 LIVKIGIGVDKFVLSSLVNMYSKCVHSSLEA 171
+ K+G+ D FV +SL+NMY +C L +
Sbjct: 157 QVFKLGLEADVFVQNSLINMYGRCGEMELSS 187
BLAST of Cp4.1LG15g07100 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 94.7 bits (234), Expect = 1.1e-18
Identity = 48/143 (33.57%), Postives = 80/143 (55.94%), Query Frame = 0
Query: 23 LQSCETEREAKQFHALSLKTGSLNHPSISPRLLALYANPRINNLEYAQSLFDWIRKPTLV 82
++ C + R+ KQ H ++TG+ + P + +L A+ A +LEYA+ +FD I KP
Sbjct: 37 IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96
Query: 83 SWNMLIKCYIENQRSNDAIALFCKLLCEFM--PDSFTLPCVLKGCARLSALQEGKQIHGL 142
+WN LI+ Y +I F ++ E P+ +T P ++K A +S+L G+ +HG+
Sbjct: 97 AWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGM 156
Query: 143 IVKIGIGVDKFVLSSLVNMYSKC 164
VK +G D FV +SL++ Y C
Sbjct: 157 AVKSAVGSDVFVANSLIHCYFSC 179
BLAST of Cp4.1LG15g07100 vs. ExPASy Swiss-Prot
Match:
Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)
HSP 1 Score: 92.4 bits (228), Expect = 5.2e-18
Identity = 48/129 (37.21%), Postives = 76/129 (58.91%), Query Frame = 0
Query: 36 HALSLKTGSLNHPSISPRLLALYANPRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQ 95
H LK+ L+H S+S L +Y+ ++N +E A+ LFD + +L SWN +I Y +N
Sbjct: 342 HGYCLKSNFLSHASVSTALTTVYS--KLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 401
Query: 96 RSNDAIALFCKL-LCEFMPDSFTLPCVLKGCARLSALQEGKQIHGLIVKIGIGVDKFVLS 155
+ DAI+LF ++ EF P+ T+ C+L CA+L AL GK +H L+ +V +
Sbjct: 402 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVST 461
Query: 156 SLVNMYSKC 164
+L+ MY+KC
Sbjct: 462 ALIGMYAKC 468
BLAST of Cp4.1LG15g07100 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 3.4e-17
Identity = 47/140 (33.57%), Postives = 82/140 (58.57%), Query Frame = 0
Query: 23 LQSCETEREAKQFHALSLKTGSLN-HPSISPRLLALYANPRINNLEYAQSLFDWIRKPTL 82
L +C+T + + HA +K G N + ++S + +P L YA S+F I++P L
Sbjct: 40 LHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNL 99
Query: 83 VSWNMLIKCYIENQRSNDAIALF-CKLLCEFMPDSFTLPCVLKGCARLSALQEGKQIHGL 142
+ WN + + + + A+ L+ C + +P+S+T P VLK CA+ A +EG+QIHG
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 159
Query: 143 IVKIGIGVDKFVLSSLVNMY 161
++K+G +D +V +SL++MY
Sbjct: 160 VLKLGCDLDLYVHTSLISMY 179
BLAST of Cp4.1LG15g07100 vs. NCBI nr
Match:
XP_023554422.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 334 bits (857), Expect = 1.37e-108
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
Query: 1 MMASLALSHSLQPFLPCNLHFPLQSCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
MMASLALSHSLQPFLPCNLHFPLQSCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN
Sbjct: 1 MMASLALSHSLQPFLPCNLHFPLQSCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
Query: 61 PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC
Sbjct: 61 PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
Query: 121 VLKGCARLSALQEGKQIHGLIVKIGIGVDKFVLSSLVNMYSKC 163
VLKGCARLSALQEGKQIHGLIVKIGIGVDKFVLSSLVNMYSKC
Sbjct: 121 VLKGCARLSALQEGKQIHGLIVKIGIGVDKFVLSSLVNMYSKC 163
BLAST of Cp4.1LG15g07100 vs. NCBI nr
Match:
KAG7011869.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 328 bits (840), Expect = 4.80e-106
Identity = 158/163 (96.93%), Postives = 161/163 (98.77%), Query Frame = 0
Query: 1 MMASLALSHSLQPFLPCNLHFPLQSCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
MMASL LSHSLQPFLPCNLHFPLQ+CETEREAKQFHALSLKTGSLNHPSISPRLLALYAN
Sbjct: 1 MMASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
Query: 61 PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
PRINNLEY QSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC
Sbjct: 61 PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
Query: 121 VLKGCARLSALQEGKQIHGLIVKIGIGVDKFVLSSLVNMYSKC 163
VLKGCARLSALQEGKQIHGLI+KIGIG+DKFVLSSLVNMYSKC
Sbjct: 121 VLKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKC 163
BLAST of Cp4.1LG15g07100 vs. NCBI nr
Match:
XP_022953072.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita moschata] >XP_022953073.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 322 bits (826), Expect = 5.95e-104
Identity = 157/163 (96.32%), Postives = 159/163 (97.55%), Query Frame = 0
Query: 1 MMASLALSHSLQPFLPCNLHFPLQSCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
MM SL LSHSLQPF P NLHFPLQ+CETEREAKQFHALSLKTGSLNHPSISPRLLALYAN
Sbjct: 1 MMPSLTLSHSLQPFFPGNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
Query: 61 PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC
Sbjct: 61 PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
Query: 121 VLKGCARLSALQEGKQIHGLIVKIGIGVDKFVLSSLVNMYSKC 163
VLKGCARLSALQEGKQIHGLI+KIGIGVDKFVLSSLVNMYSKC
Sbjct: 121 VLKGCARLSALQEGKQIHGLILKIGIGVDKFVLSSLVNMYSKC 163
BLAST of Cp4.1LG15g07100 vs. NCBI nr
Match:
KAG6572234.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 321 bits (822), Expect = 2.36e-103
Identity = 156/163 (95.71%), Postives = 158/163 (96.93%), Query Frame = 0
Query: 1 MMASLALSHSLQPFLPCNLHFPLQSCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
MM SL LSHSLQPF P NLHFPLQ+CETEREAKQFHALSLKTGSLNHPSISPRLLALYAN
Sbjct: 1 MMPSLTLSHSLQPFFPGNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
Query: 61 PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
PRINNLEY QSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC
Sbjct: 61 PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
Query: 121 VLKGCARLSALQEGKQIHGLIVKIGIGVDKFVLSSLVNMYSKC 163
VLKGCARLSALQEGKQIHGLI+KIGIGVDKFVLSSLVNMYSKC
Sbjct: 121 VLKGCARLSALQEGKQIHGLILKIGIGVDKFVLSSLVNMYSKC 163
BLAST of Cp4.1LG15g07100 vs. NCBI nr
Match:
XP_022969015.1 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 317 bits (813), Expect = 5.22e-102
Identity = 155/163 (95.09%), Postives = 158/163 (96.93%), Query Frame = 0
Query: 1 MMASLALSHSLQPFLPCNLHFPLQSCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
MM SL LSHSL PFLPCNLHFPLQ+CETEREAKQFHALS+KTGSLN PSIS RLLALYAN
Sbjct: 1 MMPSLTLSHSLLPFLPCNLHFPLQNCETEREAKQFHALSVKTGSLNDPSISLRLLALYAN 60
Query: 61 PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC
Sbjct: 61 PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
Query: 121 VLKGCARLSALQEGKQIHGLIVKIGIGVDKFVLSSLVNMYSKC 163
VLKGCARLSALQEGKQIHGLI+KIGIGVDKFVLSSLVNMYSKC
Sbjct: 121 VLKGCARLSALQEGKQIHGLILKIGIGVDKFVLSSLVNMYSKC 163
BLAST of Cp4.1LG15g07100 vs. ExPASy TrEMBL
Match:
A0A6J1GM70 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111455587 PE=3 SV=1)
HSP 1 Score: 322 bits (826), Expect = 2.88e-104
Identity = 157/163 (96.32%), Postives = 159/163 (97.55%), Query Frame = 0
Query: 1 MMASLALSHSLQPFLPCNLHFPLQSCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
MM SL LSHSLQPF P NLHFPLQ+CETEREAKQFHALSLKTGSLNHPSISPRLLALYAN
Sbjct: 1 MMPSLTLSHSLQPFFPGNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
Query: 61 PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC
Sbjct: 61 PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
Query: 121 VLKGCARLSALQEGKQIHGLIVKIGIGVDKFVLSSLVNMYSKC 163
VLKGCARLSALQEGKQIHGLI+KIGIGVDKFVLSSLVNMYSKC
Sbjct: 121 VLKGCARLSALQEGKQIHGLILKIGIGVDKFVLSSLVNMYSKC 163
BLAST of Cp4.1LG15g07100 vs. ExPASy TrEMBL
Match:
A0A6J1HYS6 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111468139 PE=3 SV=1)
HSP 1 Score: 317 bits (813), Expect = 2.53e-102
Identity = 155/163 (95.09%), Postives = 158/163 (96.93%), Query Frame = 0
Query: 1 MMASLALSHSLQPFLPCNLHFPLQSCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
MM SL LSHSL PFLPCNLHFPLQ+CETEREAKQFHALS+KTGSLN PSIS RLLALYAN
Sbjct: 1 MMPSLTLSHSLLPFLPCNLHFPLQNCETEREAKQFHALSVKTGSLNDPSISLRLLALYAN 60
Query: 61 PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC
Sbjct: 61 PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
Query: 121 VLKGCARLSALQEGKQIHGLIVKIGIGVDKFVLSSLVNMYSKC 163
VLKGCARLSALQEGKQIHGLI+KIGIGVDKFVLSSLVNMYSKC
Sbjct: 121 VLKGCARLSALQEGKQIHGLILKIGIGVDKFVLSSLVNMYSKC 163
BLAST of Cp4.1LG15g07100 vs. ExPASy TrEMBL
Match:
A0A5D3D6Y7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold295G00490 PE=3 SV=1)
HSP 1 Score: 292 bits (748), Expect = 1.21e-92
Identity = 139/162 (85.80%), Postives = 150/162 (92.59%), Query Frame = 0
Query: 2 MASLALSHSLQPFLPCNLHFPLQSCETEREAKQFHALSLKTGSLNHPSISPRLLALYANP 61
M SL LSHSLQPFLP NLHFPLQ+C TEREA Q HALS+KT SLNHPS+S LLALYA+P
Sbjct: 1 MLSLTLSHSLQPFLPPNLHFPLQNCRTEREANQLHALSIKTASLNHPSVSSPLLALYAHP 60
Query: 62 RINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPCV 121
INNL+YAQSLFDWI+KPTLVSWN+LIKCYIENQRSNDAIALFCKLLC+FMPDSFTLPCV
Sbjct: 61 TINNLQYAQSLFDWIQKPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFMPDSFTLPCV 120
Query: 122 LKGCARLSALQEGKQIHGLIVKIGIGVDKFVLSSLVNMYSKC 163
LKGCARL ALQEGKQIHGL++KIG GVDKFVLSSLV+MYSKC
Sbjct: 121 LKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKC 162
BLAST of Cp4.1LG15g07100 vs. ExPASy TrEMBL
Match:
A0A5A7V0C2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001180 PE=3 SV=1)
HSP 1 Score: 292 bits (748), Expect = 1.21e-92
Identity = 139/162 (85.80%), Postives = 150/162 (92.59%), Query Frame = 0
Query: 2 MASLALSHSLQPFLPCNLHFPLQSCETEREAKQFHALSLKTGSLNHPSISPRLLALYANP 61
M SL LSHSLQPFLP NLHFPLQ+C TEREA Q HALS+KT SLNHPS+S LLALYA+P
Sbjct: 1 MLSLTLSHSLQPFLPPNLHFPLQNCRTEREANQLHALSIKTASLNHPSVSSPLLALYAHP 60
Query: 62 RINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPCV 121
INNL+YAQSLFDWI+KPTLVSWN+LIKCYIENQRSNDAIALFCKLLC+FMPDSFTLPCV
Sbjct: 61 TINNLQYAQSLFDWIQKPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFMPDSFTLPCV 120
Query: 122 LKGCARLSALQEGKQIHGLIVKIGIGVDKFVLSSLVNMYSKC 163
LKGCARL ALQEGKQIHGL++KIG GVDKFVLSSLV+MYSKC
Sbjct: 121 LKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKC 162
BLAST of Cp4.1LG15g07100 vs. ExPASy TrEMBL
Match:
A0A1S3CG66 (pentatricopeptide repeat-containing protein At5g48910-like OS=Cucumis melo OX=3656 GN=LOC103500522 PE=3 SV=1)
HSP 1 Score: 292 bits (748), Expect = 1.21e-92
Identity = 139/162 (85.80%), Postives = 150/162 (92.59%), Query Frame = 0
Query: 2 MASLALSHSLQPFLPCNLHFPLQSCETEREAKQFHALSLKTGSLNHPSISPRLLALYANP 61
M SL LSHSLQPFLP NLHFPLQ+C TEREA Q HALS+KT SLNHPS+S LLALYA+P
Sbjct: 1 MLSLTLSHSLQPFLPPNLHFPLQNCRTEREANQLHALSIKTASLNHPSVSSPLLALYAHP 60
Query: 62 RINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPCV 121
INNL+YAQSLFDWI+KPTLVSWN+LIKCYIENQRSNDAIALFCKLLC+FMPDSFTLPCV
Sbjct: 61 TINNLQYAQSLFDWIQKPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFMPDSFTLPCV 120
Query: 122 LKGCARLSALQEGKQIHGLIVKIGIGVDKFVLSSLVNMYSKC 163
LKGCARL ALQEGKQIHGL++KIG GVDKFVLSSLV+MYSKC
Sbjct: 121 LKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKC 162
BLAST of Cp4.1LG15g07100 vs. TAIR 10
Match:
AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 103.6 bits (257), Expect = 1.6e-22
Identity = 57/154 (37.01%), Postives = 90/154 (58.44%), Query Frame = 0
Query: 16 PCNLHFPLQSCETEREAKQFHALSLKTGSLNHPSISPRLLALYANPRIN--NLEYAQSLF 75
P +L + +C T R+ Q HA+ +K+G + + +L A ++ +L+YA +F
Sbjct: 23 PSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIF 82
Query: 76 DWIRKPTLVSWNMLIKCYIENQRSND--AIALFCKLLC-EFM-PDSFTLPCVLKGCARLS 135
+ + + SWN +I+ + E+ AI LF +++ EF+ P+ FT P VLK CA+
Sbjct: 83 NQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTG 142
Query: 136 ALQEGKQIHGLIVKIGIGVDKFVLSSLVNMYSKC 164
+QEGKQIHGL +K G G D+FV+S+LV MY C
Sbjct: 143 KIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMC 176
BLAST of Cp4.1LG15g07100 vs. TAIR 10
Match:
AT1G31920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 95.1 bits (235), Expect = 5.7e-20
Identity = 54/151 (35.76%), Postives = 83/151 (54.97%), Query Frame = 0
Query: 23 LQSCETEREAKQFHALSLKTGSLNHPSIS-PRLLALYANPR-INNLEYAQSLFDWIRKPT 82
L+ C E KQ HA +K S S +LA A+ N++ YA S+F I P
Sbjct: 37 LKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPC 96
Query: 83 LVSWNMLIKCYIENQRSNDAIALFCKLLCE-FMPDSFTLPCVLKGCARLSALQEGKQIHG 142
+N +I+ Y+ +A+ + +++ PD+FT PC+LK C RL +++EGKQIHG
Sbjct: 97 TFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHG 156
Query: 143 LIVKIGIGVDKFVLSSLVNMYSKCVHSSLEA 171
+ K+G+ D FV +SL+NMY +C L +
Sbjct: 157 QVFKLGLEADVFVQNSLINMYGRCGEMELSS 187
BLAST of Cp4.1LG15g07100 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 94.7 bits (234), Expect = 7.5e-20
Identity = 48/143 (33.57%), Postives = 80/143 (55.94%), Query Frame = 0
Query: 23 LQSCETEREAKQFHALSLKTGSLNHPSISPRLLALYANPRINNLEYAQSLFDWIRKPTLV 82
++ C + R+ KQ H ++TG+ + P + +L A+ A +LEYA+ +FD I KP
Sbjct: 37 IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96
Query: 83 SWNMLIKCYIENQRSNDAIALFCKLLCEFM--PDSFTLPCVLKGCARLSALQEGKQIHGL 142
+WN LI+ Y +I F ++ E P+ +T P ++K A +S+L G+ +HG+
Sbjct: 97 AWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGM 156
Query: 143 IVKIGIGVDKFVLSSLVNMYSKC 164
VK +G D FV +SL++ Y C
Sbjct: 157 AVKSAVGSDVFVANSLIHCYFSC 179
BLAST of Cp4.1LG15g07100 vs. TAIR 10
Match:
AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 92.4 bits (228), Expect = 3.7e-19
Identity = 48/129 (37.21%), Postives = 76/129 (58.91%), Query Frame = 0
Query: 36 HALSLKTGSLNHPSISPRLLALYANPRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQ 95
H LK+ L+H S+S L +Y+ ++N +E A+ LFD + +L SWN +I Y +N
Sbjct: 342 HGYCLKSNFLSHASVSTALTTVYS--KLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 401
Query: 96 RSNDAIALFCKL-LCEFMPDSFTLPCVLKGCARLSALQEGKQIHGLIVKIGIGVDKFVLS 155
+ DAI+LF ++ EF P+ T+ C+L CA+L AL GK +H L+ +V +
Sbjct: 402 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVST 461
Query: 156 SLVNMYSKC 164
+L+ MY+KC
Sbjct: 462 ALIGMYAKC 468
BLAST of Cp4.1LG15g07100 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 89.7 bits (221), Expect = 2.4e-18
Identity = 47/140 (33.57%), Postives = 82/140 (58.57%), Query Frame = 0
Query: 23 LQSCETEREAKQFHALSLKTGSLN-HPSISPRLLALYANPRINNLEYAQSLFDWIRKPTL 82
L +C+T + + HA +K G N + ++S + +P L YA S+F I++P L
Sbjct: 40 LHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNL 99
Query: 83 VSWNMLIKCYIENQRSNDAIALF-CKLLCEFMPDSFTLPCVLKGCARLSALQEGKQIHGL 142
+ WN + + + + A+ L+ C + +P+S+T P VLK CA+ A +EG+QIHG
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 159
Query: 143 IVKIGIGVDKFVLSSLVNMY 161
++K+G +D +V +SL++MY
Sbjct: 160 VLKLGCDLDLYVHTSLISMY 179
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9FI80 | 2.3e-21 | 37.01 | Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... | [more] |
Q9C6T2 | 8.0e-19 | 35.76 | Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX... | [more] |
O82380 | 1.1e-18 | 33.57 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9SUH6 | 5.2e-18 | 37.21 | Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX... | [more] |
Q9LN01 | 3.4e-17 | 33.57 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
XP_023554422.1 | 1.37e-108 | 100.00 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucur... | [more] |
KAG7011869.1 | 4.80e-106 | 96.93 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022953072.1 | 5.95e-104 | 96.32 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucur... | [more] |
KAG6572234.1 | 2.36e-103 | 95.71 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022969015.1 | 5.22e-102 | 95.09 | pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucur... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GM70 | 2.88e-104 | 96.32 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cuc... | [more] |
A0A6J1HYS6 | 2.53e-102 | 95.09 | pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like OS=Cuc... | [more] |
A0A5D3D6Y7 | 1.21e-92 | 85.80 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A5A7V0C2 | 1.21e-92 | 85.80 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3CG66 | 1.21e-92 | 85.80 | pentatricopeptide repeat-containing protein At5g48910-like OS=Cucumis melo OX=36... | [more] |
Match Name | E-value | Identity | Description | |
AT5G48910.1 | 1.6e-22 | 37.01 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G31920.1 | 5.7e-20 | 35.76 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G29760.1 | 7.5e-20 | 33.57 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G30700.1 | 3.7e-19 | 37.21 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G08070.1 | 2.4e-18 | 33.57 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |