Cp4.1LG15g04520 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g04520
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	classical arabinogalactan protein 9-like
Location	Cp4.1LG15: 5619044 .. 5621307 (-)
RNA-Seq Expression	Cp4.1LG15g04520
Synteny	Cp4.1LG15g04520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTAATCATGCATCATCACGTGGAAGGACCCATTCATAATTGATATTATATAAATACTTTTTTAATTAATTTTAAAAAGAAAAAGGACGGGACAATAATACATATCAATAGTGTTCCTGGATTGAATTGGGTCGAGTTGAGAAATTTTTTAGACTCAACTCAATTATTCGAATTATAATTTTTTTAAAATTTAAATTAGCTTTTATTAAATAATGAACTCAAATCTAGTCAAATTTAGTTGGATTGAACGGGTAGATTGATTCCCGCCATTTATTTATTTTTTTTTAATTAATTTCAATATATATCTAATTGTTGGGAGATAAGAAATAAATAAATAAACATAGGTATAGGTATATATAATTATATGAGTTGGATTGAGTTGAGATTTTACCCCTGTTTCATTCTTGATTTGACATGTCATTTTAGATTAATGTAATGGGTCCCGTTATGGGACACGTGGCAGTCGTAGATTCTATGTTGATACAATGTTGGATTGTCGGTTGGGCCCACCGACAGTGGGATACGTGAGATATGTTTGGTGGCGGGTGGCGGGTGGCGGTTGGCCACATGCGCCTCATCAAATTTGAAAATTCTTCATTGGTTATGCTTATTGGATGTGAAATTACCTAAAATGTCCTCCGTTTCCTAATTCTTCTATTTATTCTCTTCCTCTCTTTTGATTTCAGAAGCCAAGCCACAATTATGGATCCTCAAGCATTGTTTTGCTTCACTTTGATCTCCATTGCCTTCGCCGTTGCCGGAGCTCAGCCCCCCTCCAGTCCCCCCACCGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCCTCCCGCCACTCCTCCTCCAGTATCATCTCCCCCACCTGCCACTCCCCCTCCGGCTTCCCCACCTCCAGCCACTCCCCCTCCGGCTTCCCCACCTCCAGCCACTCCTCCTCCAGCTTCCCCACCTCCTGCCACTCCTCCTCCGGCATCCCCACCACCAGCCACTCCTCCTCCAGCTTCCCCACCGCCGGCCACTCCTCCTCCAGCTTCCCCACCACCGGCAACCCCACCACCAGCCACTCCACCTCCTACACCACTGGCATCACCACCAGCGGCGGTTCCGGCTCCTGCACCCAGTAAGAAGAAGTTGAAGGCGGCTCCGGGTCCGGCCCCAGTTTCGAGCCCGCCGATGCCGTCGGCGGAGGGTCCAGGACCCGCCGGCCCAGAATCTCCTACCCCATCTCAGAACGACAATGTAAGCTTCATTATATACTTCGATTCATCCTACATTAATCTTCTACTAAATTTTAAATGTTATTAAACTAATAATTCTACATTTTCAAATAATTTTTTTAGATTCATTAAAAAAATTAACTCATTTTTTACATTTTTTTTTAATTTTAAAATTATTATCCACAAAATCAAGAGTTCATAGATCTAGACGGTGTAAATTAAAATTTTACGGTCATATTTAATGGAAATTATATAATACACAAAATTAAAAGTTTAGAAATATATTAAACACCCTCTAAAGTTCGTAAACTTTTATGACACGAGCATGAACGAAAACTTCTAGATCTTCTTGCATTTCACGTTACGTTTTTCATTAATCATTATCATCGAACACATATTCACGAAAACGCTAACACGACACGTCGGGTTGATGGACAATATTATTATTATTATTATTGCAGAGTGGAGTGGAGAAAAGTTGGAGAAAGGAGACAATGGTGGGGAGCATGTTGATTGGAATGGGATATGTATTGATGATGGCTTAGATTTCTTCCTTTTTTTTTTATGCTGTCTATGTTGGGTTTTCATTAATCTTCATTTTGCCTGTTCCTTATTTCATTTCATTTTGATTATTATTATTATTATTATTATTATTATTAGCCCATTTCTTGTTTGGGACTTTTGATCTCCATATATATAATACCCATTTGCTTCGGTTACGTTCTCTTGACTCAGTTTAAAATTGTCGGGATGTTTTAAAATTATGATTCGAATCATTCAAAGCGTGTACCTGAAATGTTATGCTGAAAAATGTTTTAGATGTATCGGGTTTAGATAACTGAATATATGATAATAAGATAATGTTCCAAAAT

mRNA sequence

ATGGTATCATCTCCCCCACCTGCCACTCCCCCTCCGGCTTCCCCACCTCCAGCCACTCCCCCTCCGGCTTCCCCACCTCCAGCCACTCCTCCTCCAGCTTCCCCACCTCCTGCCACTCCTCCTCCGGCATCCCCACCACCAGCCACTCCTCCTCCAGCTTCCCCACCGCCGGCCACTCCTCCTCCAGCTTCCCCACCACCGGCAACCCCACCACCAGCCACTCCACCTCCTACACCACTGGCATCACCACCAGCGGCGGTTCCGGCTCCTGCACCCAGTAAGAAGAAGTTGAAGGCGGCTCCGGGTCCGGCCCCAGTTTCGAGCCCGCCGATGCCGTCGGCGGAGGGTCCAGGACCCGCCGGCCCAGAATCTCCTACCCCATCTCAGAACGACAATAGTGGAGTGGAGAAAAGTTGGAGAAAGGAGACAATGGTGGGGAGCATGTTGATTGGAATGGGATATGTATTGATGATGGCTTAGATTTCTTCCTTTTTTTTTTATGCTGTCTATGTTGGGTTTTCATTAATCTTCATTTTGCCTGTTCCTTATTTCATTTCATTTTGATTATTATTATTATTATTATTATTATTATTAGCCCATTTCTTGTTTGGGACTTTTGATCTCCATATATATAATACCCATTTGCTTCGGTTACGTTCTCTTGACTCAGTTTAAAATTGTCGGGATGTTTTAAAATTATGATTCGAATCATTCAAAGCGTGTACCTGAAATGTTATGCTGAAAAATGTTTTAGATGTATCGGGTTTAGATAACTGAATATATGATAATAAGATAATGTTCCAAAAT

Coding sequence (CDS)

ATGGTATCATCTCCCCCACCTGCCACTCCCCCTCCGGCTTCCCCACCTCCAGCCACTCCCCCTCCGGCTTCCCCACCTCCAGCCACTCCTCCTCCAGCTTCCCCACCTCCTGCCACTCCTCCTCCGGCATCCCCACCACCAGCCACTCCTCCTCCAGCTTCCCCACCGCCGGCCACTCCTCCTCCAGCTTCCCCACCACCGGCAACCCCACCACCAGCCACTCCACCTCCTACACCACTGGCATCACCACCAGCGGCGGTTCCGGCTCCTGCACCCAGTAAGAAGAAGTTGAAGGCGGCTCCGGGTCCGGCCCCAGTTTCGAGCCCGCCGATGCCGTCGGCGGAGGGTCCAGGACCCGCCGGCCCAGAATCTCCTACCCCATCTCAGAACGACAATAGTGGAGTGGAGAAAAGTTGGAGAAAGGAGACAATGGTGGGGAGCATGTTGATTGGAATGGGATATGTATTGATGATGGCTTAG

Protein sequence

MVSSPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPTPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA

Homology

[Close]

BLAST of Cp4.1LG15g04520 vs. ExPASy Swiss-Prot
Match: Q9C5S0 (Classical arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=AGP9 PE=1 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 1.0e-07
Identity = 96/167 (57.49%), Postives = 112/167 (67.07%), Query Frame = 0


Query: 5   PPPATPPPASPPP--ATPPP--ASPPPAT--PPPASPPP--ATPPPASPPPATPPPASPP 64
           P P TPPPA+ PP  + PPP   SPPP T  PPPA+PPP  ++PPPASPPPATPPP + P
Sbjct: 34  PTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPPATPPPVASP 93

Query: 65  PATPPPASPPPATPPP-ATPPPTPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAE 124
           P  PP ASPPPATPPP ATPPP PLASPPA VPAPAP+ K    +P P+P SSPP+PS++
Sbjct: 94  P--PPVASPPPATPPPVATPPPAPLASPPAQVPAPAPTTK--PDSPSPSPSSSPPLPSSD 153

Query: 125 GPGPAGPE-SPTPSQ---NDNSGVEKSWRKETMVGSMLIGMGYVLMM 159
            PGP+    SP PS    ND +G  K      MV S++ G   V  M
Sbjct: 154 APGPSTDSISPAPSPTDVNDQNGASK------MVSSLVFGSVLVWFM 190

[Close]

BLAST of Cp4.1LG15g04520 vs. NCBI nr
Match: XP_023553858.1 (classical arabinogalactan protein 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 229 bits (585), Expect = 9.38e-74
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 2   VSSPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPP 61
           VSSPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPP
Sbjct: 49  VSSPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPP 108

Query: 62  PASPPPATPPPATPPPTPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAG 121
           PASPPPATPPPATPPPTPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAG
Sbjct: 109 PASPPPATPPPATPPPTPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAG 168

Query: 122 PESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA 159
           PESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA
Sbjct: 169 PESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA 206

[Close]

BLAST of Cp4.1LG15g04520 vs. NCBI nr
Match: KAG6571935.1 (hypothetical protein SDJN03_28663, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 217 bits (553), Expect = 9.50e-69
Identity = 154/162 (95.06%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 3   SSPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPP 62
           ++PPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPP
Sbjct: 55  ATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPP 114

Query: 63  ASPPPATPPPATPPPT-----PLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGP 122
           ASPPPATPPPATPPP      PLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGP
Sbjct: 115 ASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGP 174

Query: 123 GPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA 159
           GPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA
Sbjct: 175 GPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA 216

[Close]

BLAST of Cp4.1LG15g04520 vs. NCBI nr
Match: KAG7011623.1 (hypothetical protein SDJN02_26529, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 217 bits (553), Expect = 1.12e-68
Identity = 154/162 (95.06%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 3   SSPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPP 62
           ++PPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPP
Sbjct: 60  ATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPP 119

Query: 63  ASPPPATPPPATPPPT-----PLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGP 122
           ASPPPATPPPATPPP      PLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGP
Sbjct: 120 ASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGP 179

Query: 123 GPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA 159
           GPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA
Sbjct: 180 GPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA 221

[Close]

BLAST of Cp4.1LG15g04520 vs. NCBI nr
Match: XP_022952421.1 (classical arabinogalactan protein 9-like [Cucurbita moschata])

HSP 1 Score: 213 bits (543), Expect = 2.51e-67
Identity = 147/154 (95.45%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 6   PPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASP 65
           PPATPPPASPPPATPPPASPPPATPPPASPPPA+PPPA+PPPA+PPPA+PPPA+PPPA+P
Sbjct: 56  PPATPPPASPPPATPPPASPPPATPPPASPPPASPPPATPPPASPPPATPPPASPPPATP 115

Query: 66  PPATPPPATPPPTPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESP 125
           PPATPPPATPPP PLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESP
Sbjct: 116 PPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESP 175

Query: 126 TPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA 159
           TPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA
Sbjct: 176 TPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA 209

[Close]

BLAST of Cp4.1LG15g04520 vs. NCBI nr
Match: XP_022972415.1 (classical arabinogalactan protein 9-like [Cucurbita maxima])

HSP 1 Score: 192 bits (487), Expect = 1.24e-58
Identity = 133/142 (93.66%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 18  ATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPP 77
           ATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPA     TPPPATPPP
Sbjct: 87  ATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPA-----TPPPATPPP 146

Query: 78  TPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEK 137
            PLASPPAAVPAPAPSKKKLKAAPG APVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEK
Sbjct: 147 APLASPPAAVPAPAPSKKKLKAAPGSAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEK 206

Query: 138 SWRKETMVGSMLIGMGYVLMMA 159
           SWRKET++GSMLIGMGYVLMMA
Sbjct: 207 SWRKETVLGSMLIGMGYVLMMA 223

[Close]

BLAST of Cp4.1LG15g04520 vs. ExPASy TrEMBL
Match: A0A6J1GK65 (classical arabinogalactan protein 9-like OS=Cucurbita moschata OX=3662 GN=LOC111455113 PE=4 SV=1)

HSP 1 Score: 213 bits (543), Expect = 1.21e-67
Identity = 147/154 (95.45%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 6   PPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASP 65
           PPATPPPASPPPATPPPASPPPATPPPASPPPA+PPPA+PPPA+PPPA+PPPA+PPPA+P
Sbjct: 56  PPATPPPASPPPATPPPASPPPATPPPASPPPASPPPATPPPASPPPATPPPASPPPATP 115

Query: 66  PPATPPPATPPPTPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESP 125
           PPATPPPATPPP PLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESP
Sbjct: 116 PPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESP 175

Query: 126 TPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA 159
           TPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA
Sbjct: 176 TPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA 209

[Close]

BLAST of Cp4.1LG15g04520 vs. ExPASy TrEMBL
Match: A0A6J1I8J9 (classical arabinogalactan protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111470982 PE=4 SV=1)

HSP 1 Score: 192 bits (487), Expect = 6.00e-59
Identity = 133/142 (93.66%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 18  ATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPP 77
           ATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPA     TPPPATPPP
Sbjct: 87  ATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPA-----TPPPATPPP 146

Query: 78  TPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEK 137
            PLASPPAAVPAPAPSKKKLKAAPG APVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEK
Sbjct: 147 APLASPPAAVPAPAPSKKKLKAAPGSAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEK 206

Query: 138 SWRKETMVGSMLIGMGYVLMMA 159
           SWRKET++GSMLIGMGYVLMMA
Sbjct: 207 SWRKETVLGSMLIGMGYVLMMA 223

[Close]

BLAST of Cp4.1LG15g04520 vs. ExPASy TrEMBL
Match: A0A5A7SJX5 (Classical arabinogalactan protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001070 PE=4 SV=1)

HSP 1 Score: 175 bits (443), Expect = 1.72e-52
Identity = 135/160 (84.38%), Postives = 145/160 (90.62%), Query Frame = 0


Query: 2   VSSPPPA-TPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATP 61
           VSSPPPA TPPPA    ATPPPASPPPA+PPPASPPPATPPPASPPPA+PPPASPPPA+P
Sbjct: 51  VSSPPPAATPPPA----ATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASP 110

Query: 62  PPASPPPATPPPATPPPTPLASPPAAVPAPAPSKKKLKAA-PGPAPVSSPPMPSAEGPGP 121
           PPASPPPA+PPPA PPP PLASPP AVPAPAPSKKK+KAA PGPAPVSSPP PS E PGP
Sbjct: 111 PPASPPPASPPPAIPPPAPLASPPTAVPAPAPSKKKVKAAAPGPAPVSSPPAPSVEAPGP 170

Query: 122 AGPE-SPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMM 158
           AGP+ SPTPSQNDNSGVEK WRKE+MVGS++IGMGYV +M
Sbjct: 171 AGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFLM 206

[Close]

BLAST of Cp4.1LG15g04520 vs. ExPASy TrEMBL
Match: A0A1S3BZW9 (classical arabinogalactan protein 9 OS=Cucumis melo OX=3656 GN=LOC103495292 PE=4 SV=1)

HSP 1 Score: 175 bits (443), Expect = 1.72e-52
Identity = 135/160 (84.38%), Postives = 145/160 (90.62%), Query Frame = 0


Query: 2   VSSPPPA-TPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATP 61
           VSSPPPA TPPPA    ATPPPASPPPA+PPPASPPPATPPPASPPPA+PPPASPPPA+P
Sbjct: 51  VSSPPPAATPPPA----ATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASP 110

Query: 62  PPASPPPATPPPATPPPTPLASPPAAVPAPAPSKKKLKAA-PGPAPVSSPPMPSAEGPGP 121
           PPASPPPA+PPPA PPP PLASPP AVPAPAPSKKK+KAA PGPAPVSSPP PS E PGP
Sbjct: 111 PPASPPPASPPPAIPPPAPLASPPTAVPAPAPSKKKVKAAAPGPAPVSSPPAPSVEAPGP 170

Query: 122 AGPE-SPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMM 158
           AGP+ SPTPSQNDNSGVEK WRKE+MVGS++IGMGYV +M
Sbjct: 171 AGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFLM 206

[Close]

BLAST of Cp4.1LG15g04520 vs. ExPASy TrEMBL
Match: A0A0A0K6D8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071560 PE=4 SV=1)

HSP 1 Score: 165 bits (417), Expect = 1.01e-48
Identity = 128/160 (80.00%), Postives = 140/160 (87.50%), Query Frame = 0


Query: 2   VSSPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPP 61
           VSSPPPA         ATPPPASPPPA+PPPASPPPATPPPASPPPA+PPPASPPPA+PP
Sbjct: 43  VSSPPPA---------ATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPP 102

Query: 62  PASPPPATPPP-ATPPPTPLASPPAAVPAPAPSKKKLKAA-PGPAPVSSPPMPSAEGPGP 121
           PA+PPPA+PPP ATPPP PLASPP AVPAPAPSKKK+KAA P P+PVSSPP PS E PGP
Sbjct: 103 PATPPPASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGP 162

Query: 122 AGPE-SPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMM 158
           AGP+ SPTPSQNDNSGVEK WRKE+MVGS++IGMGYV +M
Sbjct: 163 AGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFLM 193

[Close]

BLAST of Cp4.1LG15g04520 vs. TAIR 10
Match: AT2G14890.1 (arabinogalactan protein 9 )

HSP 1 Score: 58.2 bits (139), Expect = 7.2e-09
Identity = 96/167 (57.49%), Postives = 112/167 (67.07%), Query Frame = 0


Query: 5   PPPATPPPASPPP--ATPPP--ASPPPAT--PPPASPPP--ATPPPASPPPATPPPASPP 64
           P P TPPPA+ PP  + PPP   SPPP T  PPPA+PPP  ++PPPASPPPATPPP + P
Sbjct: 34  PTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPPATPPPVASP 93

Query: 65  PATPPPASPPPATPPP-ATPPPTPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAE 124
           P  PP ASPPPATPPP ATPPP PLASPPA VPAPAP+ K    +P P+P SSPP+PS++
Sbjct: 94  P--PPVASPPPATPPPVATPPPAPLASPPAQVPAPAPTTK--PDSPSPSPSSSPPLPSSD 153

Query: 125 GPGPAGPE-SPTPSQ---NDNSGVEKSWRKETMVGSMLIGMGYVLMM 159
            PGP+    SP PS    ND +G  K      MV S++ G   V  M
Sbjct: 154 APGPSTDSISPAPSPTDVNDQNGASK------MVSSLVFGSVLVWFM 190

[Close]

BLAST of Cp4.1LG15g04520 vs. TAIR 10
Match: AT2G14890.2 (arabinogalactan protein 9 )

HSP 1 Score: 55.8 bits (133), Expect = 3.6e-08
Identity = 87/137 (63.50%), Postives = 100/137 (72.99%), Query Frame = 0


Query: 5   PPPATPPPASPPP--ATPPP--ASPPPAT--PPPASPPP--ATPPPASPPPATPPPASPP 64
           P P TPPPA+ PP  + PPP   SPPP T  PPPA+PPP  ++PPPASPPPATPPP + P
Sbjct: 34  PTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPPATPPPVASP 93

Query: 65  PATPPPASPPPATPPP-ATPPPTPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAE 124
           P  PP ASPPPATPPP ATPPP PLASPPA VPAPAP+ K    +P P+P SSPP+PS++
Sbjct: 94  P--PPVASPPPATPPPVATPPPAPLASPPAQVPAPAPTTK--PDSPSPSPSSSPPLPSSD 153

Query: 125 GPGPAGPE-SPTPSQND 132
            PGP+    SP PS  D
Sbjct: 154 APGPSTDSISPAPSPTD 166

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g04520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C5S0	1.0e-07	57.49	Classical arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=AGP9 PE=1...	[more]

BLAST of Cp4.1LG15g04520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023553858.1	9.38e-74	100.00	classical arabinogalactan protein 9-like [Cucurbita pepo subsp. pepo]	[more]
KAG6571935.1	9.50e-69	95.06	hypothetical protein SDJN03_28663, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7011623.1	1.12e-68	95.06	hypothetical protein SDJN02_26529, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022952421.1	2.51e-67	95.45	classical arabinogalactan protein 9-like [Cucurbita moschata]	[more]
XP_022972415.1	1.24e-58	93.66	classical arabinogalactan protein 9-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG15g04520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GK65	1.21e-67	95.45	classical arabinogalactan protein 9-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1I8J9	6.00e-59	93.66	classical arabinogalactan protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A5A7SJX5	1.72e-52	84.38	Classical arabinogalactan protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3BZW9	1.72e-52	84.38	classical arabinogalactan protein 9 OS=Cucumis melo OX=3656 GN=LOC103495292 PE=4...	[more]
A0A0A0K6D8	1.01e-48	80.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071560 PE=4 SV=1	[more]

BLAST of Cp4.1LG15g04520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14890.1	7.2e-09	57.49	arabinogalactan protein 9	[more]
AT2G14890.2	3.6e-08	63.50	arabinogalactan protein 9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 14..31 score: 45.56 coord: 36..61 score: 45.38 coord: 1..13 score: 23.53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..146
None	No IPR available	PANTHER	PTHR37209:SF1	CLASSICAL ARABINOGALACTAN PROTEIN 9	coord: 35..158 coord: 2..43
IPR044981	Lysine-rich arabinogalactan protein AGP9/17/18	PANTHER	PTHR37209	LYSINE-RICH ARABINOGALACTAN PROTEIN 17-RELATED	coord: 2..43
IPR044981	Lysine-rich arabinogalactan protein AGP9/17/18	PANTHER	PTHR37209	LYSINE-RICH ARABINOGALACTAN PROTEIN 17-RELATED	coord: 35..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g04520.1	Cp4.1LG15g04520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane