Cp4.1LG15g02740 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAGCGATAAATGAGATTGGAGCAGAATAATTTTAGGGCGAAAAAGGAATTTAGAGCAGACATCGAAAGGGGTTGGAGACTACAAGTTTGATTCCTTCAGCTTTGGCATCCCAATCGGAGCGACGACGAACACGGAAGCCAGGGAGAGGGAGGAGCGATACAATCCGCATCATTCCTTCTCCTTAATCCCCATCGCAATCATATTCTTCTCAATCTGGATTCCAACTTCATCAACTGCGATTTTTCTTAATATACATGTATGTATGAGTGTGTTTGTGTGTGCGCTTTCATGTCCGATCCTCTTTCTGCTTCTAATTAGGGTTCCGATTACTCTATGCTACTACTTACTGTCTCTATATTAGGGTTTTCGCTGCTTTACATGCCTGCCTCTTTGTGGATTTTTTTGTCCGTCTTCTTCCTGAATCAAGCGTCCGGTTTGACCTTTTTAGTCGTTGAAACTCCTCAAATCCAGTGTCTTTATGTTTATTTTATGGATTATGTTAATGTTGATTAATCTAATTTGTTAACAGAGTGAAGATTTGTACTTGTTGATACAAGATGCCACGGGATTTATCACGATCTCGATCTCCTTCGTATAGGCGGAGGCTTTCACCATCTCCATTAGGGCATAGGTATACCAGGAGAAGTCGAAGAGACAGGAGCCGTTCACCGTATTCATCGTACAGCAGGTGATCCCGTTTGTGTTTTTAGTTTTATTTACTTTCGATTAATCGAACGATTATTAAAAGACTAACGACACCATATCTTCCCACGCGGTTTGTATTTCACCTCCATCGGAGTTTCTGCATGAATCTTTCCCCTTTTGCTTTTCATTTCCCCCCTGTTTTTTCTTTCTAATATGAAAGCTGTTCAGTGTTGCTCTAGATTTACTTTTCTCTTAAATTTGTTCTGTGATGAGGTAATAAGACTTTGATTATACTAATTGAATGTTCGTTTATGATCTATTCTTATTATTATAATGTTGATAACAAACAGTATGGATACTTTTGTTGCTGTGTTTATTGGGTTTTTGTGTTTGTTTTATTGTTCAGTTACAAAAATGGATCGTTATATATAAATCGTCCACGTTAGGTTTGCTTGATGTTGTTTGAGTGAGTCTTGTCTTCCGGATCTTCACAACCTCTTTTTTATTGTTTATGTGCTGATGAATGATGATTGGTAGTCTTGTTTTGTACTTGTGCTTTACTATTTTGAATTTCACGTAAAGTTTCTGATTTCCGTGGCATAATCGTCAAGTACCTCCTGATGATATTTAATCATTTGTTGAGAATGGTGAGCGGGGGAGAAAATTTAAGAAGTCTTTGGGGGGAAACTCTAAAATGTGGTGAGAAGCAAACAGAATAGTCATGATCTCGGTAAGAGAATTGAGATAAGTCAGTTCTTCCTATTACATGGGAAGTGATCAGATATGCTGATCGGTGTCCTGTCATTGCTCGATTGTGACTTTGCTTCTTCATGTGATGTGATAAAAGATGGAGCCCACAAAGGTTTATTCTTAACAATGTATGAGGTAACTGTACGGTGCGAAGTGGTTGGCAGCTTGATACTTACCTCTGTATAATGAAGTCTTTATCTCTTGCTCAATAATTCCTATGCATCATACAGAAGAAAAAGCCGCTCCATTTCCCCCCCAAGGCGTTATAGAAATCGTTCACGAACACCTAGACGCCATAGAAGTCGTTCTCCAACTTCAAGGAGTTGCAAGAAGTCAAGGCGACGAAGTTCCTCATCATCTGTGCATCATAGATCTTCTAGTTCTAGCCTTGGATCCATTGAGCAAAAAAGTACCAGTGAAAAATTGAAAAAGGAAGAGGAAGAAAGGAAAAGGTATATTAACTAAACTCGCTCACTGATTTTTATTTTCTTTCTGCCTCTCAATTGTCCTTGGGTTTATTTGCAGAATCTTTTGATATACAACAATGGGAAATCTCATCAGTTGTTGAATTTTTTAGTTCGTTTTAGTTCTTTGTAGGCATTGACCCTTTGAATCCTTCAACTGAGATATTACTAGAACTGCAGTCAGGCTCTCTAGGTTTTTTTACCATGAAAGATTATGGCATAACTAAAGCTCACATTAGGACAACTAAGTGAATTTTTGTCCCAAGTATCAGTGGTACCCTTAATTTCACATTATAAAATTCTATTACTACTTTTCTATTAGGATTGGAAACTATTAAAAATGGCTACAGATTTGTATAATAATGTTACAATTCTGTGGGGTGATCGCCCATTTAGTTTTTCTCATTGCAAAATTGTCATTATTGCTATTGTTGATGAGGGGCATATATATGTGCTATGGGTGATGAAGAACCATATCTTTTAACTTATTATACATGGATGTTGCATTTTCATGGTCGTTTATAACGAAAACATTTGTTGCTTAATTGGTTTGGAACTATTAATTTGTTCTACGAGGAACCTTCCATTTAGTTCGAGTTAAAAGTATAAAATGACTCAAGTAAAACCTAGTTGTGGGATGCAGGCAGTGTTTTCATCACCAGAACCCGTTTATTTTTCTTTCAATTGTTTATACCAAATTGAACAGAGAAATCTACACTTTTTTGGAGTCTTGAGGAGTCCAATAGTTTGTTTGATGCTTCAAAATCTGCTCTTTTCATTTCTGCAATGTACTCCTGCTTTGTGGAACTCTTATCCCATCGCTGACTTTATCTCGCCCATCTAGTTCTTTCTTATAGTTTGCTTTGTACTGGATTAACTGGCTACTTTATATTCTTGTAAATTCTCTTCAGTGCAGACTTCTATGTTTCAGTAGTTCTCTCTACGACTGTTGCCTGCTCGCTAACGTGCAGTCCCTAACTAATTTAAATTTGAGCAAGTGATTTTAAGATGGGAAGAACTAATGTAATATGTGGCTTATTCAATTGCTAGAGCATAACAGTCTGCTGTTATCATTCAATGTGAATGCGTAATATGGAATATTTGTACAGTCCGACACTTGTTGACTAGTTTAAGTTTGATAGGCCTAGGAAAGGAACCTTGTTTTACATGAAATCCTGACTGTTAGTTTAAAGAGTCACAGTTTAGACTTTTTCCATGGCGCAACAATGGAAGACGCTTTTCACCTTTTCGATGTTTTGAAGCTATATGAATAGAAGTTTCTTTATATACATAAGAAAAAAAGAAAAAAATATAGTATACACCTCATTCAAAGAATGTTATAGTGTGAGGATTTGAGTTTTTCTAGTGATCAGTTTTAAACCTGCGACAGGTTACTTGACATTCTTCTCCACAGGATTTTCTGAAGGAAGATACTGCTATAGACTTGTTATATTTGATCATCAATTTGGTGCATCGTTAATATGCTGTTCACCAATTTCGTAACTCTTTTGTATGGATCAGGATTGAATTAGAGGTATGCCCTAAAAGGATAAGCATGTTTTAACGCTCTTACCGTCTTGGAGGTTAGTTTGTTAATTTAATCTATGCTTACAACATAAACCGGATGAGGAAAAAAACAATGGACCAAGGCATGATAAGTCACTTGTCATTTAATTGTTGATGAATTTTGGAGGATCCTTCAGGTGGTGGTGCATTTTACCCATCCGTGGTTAGCTGTTTTCTTAAATATTTATTTTTCTCTCAGGCGACAACAGGAGACAGAGGCCAAATTACTCAAAGAAGAAACAGAAAAGAGAGTGGAAGAAGCGATTCGCAAGGAAGTCGAAGAGGGCCTGAACTCCGGGGATGTTAAACAGGAAATAAACAGGAAGTTGGAGGAGGGACGGAGAAGGCTTGCCGAAGAAGTGACAGCTCAACTCGAGAAGGAAAAGGAAGCTGCCCTTGTTGAGGCCAGACGGAAAGAGGTACTAATATTGATTGATCTATTGCTTAATTTTTAAGACTGTGGGTTTGGTTTGGACAGATGTTTGAGAAATGTGCTATTGTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTNTCCGTTTCGTTTCGTTTACAGGAACAAGCTCGAAAAGAAAAAGAAGACCGAGAAAGGATGGTCGAGGAGAGCCGGAGGAGAGTAGAGGAGGCTCAGAGAAGGGAGGCTTTAGAGAGACAAAAGAGAGAGGAGGAAAGATACAGGGAATTGGAAGAGCTACAAAGGCAAAAAGAAGAGGCTATTAAGAGGAAAAAACAGGATGAAGAGGAACAGCGTCTTAAACAGATGAAAGTATTGGGTAAAAACAAATCACGGCCGAAGCTATCATTTGCCATTGGCTCCAAATAAAAACATGTCAAGAAGAAACGTAAGTAAATGCTTCAATTTGGGATGACATATTTTTTGCTTAATGCCAGTCCATTTTTCTTATGAAACTCAGTCTTCGTCTACATCATAAATGCTTCGCCAATTTCCCACGCCCTCACCCCATAAAAAACCCCTAAATCCAACAAGGAATGATAATAGAGTATGCTTGCAATGTCAGTGTTAGGAACGCATTGCATGTAGCCCTTTTGAGAGGAGAACAGACCATTTTTCTCTGCAATCTTTCAACCACAAAGTATGCACTATCTTTCAAACCCGTGTTCTCTTACGTGACTTTCTTATTTGGGTTACTAGATGTGTATTTACTACTCTACACATGATTCACACGCCTTTTGGGCCTCGTACTAGTCGGATTAGCGTCTCTGGTGTTGTTGTCGGGCACTTGAAAGGAATAGCGACCGTCATATTATCATATTAAACATGACGATCACGTTTGTACTCATCATTAGAGAAA TAAGCGATAAATGAGATTGGAGCAGAATAATTTTAGGGCGAAAAAGGAATTTAGAGCAGACATCGAAAGGGGTTGGAGACTACAAGTTTGATTCCTTCAGCTTTGGCATCCCAATCGGAGCGACGACGAACACGGAAGCCAGGGAGAGGGAGGAGCGATACAATCCGCATCATTCCTTCTCCTTAATCCCCATCGCAATCATATTCTTCTCAATCTGGATTCCAACTTCATCAACTGCGATTTTTCTTAATATACATAGTGAAGATTTGTACTTGTTGATACAAGATGCCACGGGATTTATCACGATCTCGATCTCCTTCGTATAGGCGGAGGCTTTCACCATCTCCATTAGGGCATAGGTATACCAGGAGAAGTCGAAGAGACAGGAGCCGTTCACCGTATTCATCGTACAGCAGAAGAAAAAGCCGCTCCATTTCCCCCCCAAGGCGTTATAGAAATCGTTCACGAACACCTAGACGCCATAGAAGTCGTTCTCCAACTTCAAGGAGTTGCAAGAAGTCAAGGCGACGAAGTTCCTCATCATCTGTGCATCATAGATCTTCTAGTTCTAGCCTTGGATCCATTGAGCAAAAAAGTACCAGTGAAAAATTGAAAAAGGAAGAGGAAGAAAGGAAAAGGCGACAACAGGAGACAGAGGCCAAATTACTCAAAGAAGAAACAGAAAAGAGAGTGGAAGAAGCGATTCGCAAGGAAGTCGAAGAGGGCCTGAACTCCGGGGATGTTAAACAGGAAATAAACAGGAAGTTGGAGGAGGGACGGAGAAGGCTTGCCGAAGAAGTGACAGCTCAACTCGAGAAGGAAAAGGAAGCTGCCCTTGTTGAGGCCAGACGGAAAGAGGAACAAGCTCGAAAAGAAAAAGAAGACCGAGAAAGGATGGTCGAGGAGAGCCGGAGGAGAGTAGAGGAGGCTCAGAGAAGGGAGGCTTTAGAGAGACAAAAGAGAGAGGAGGAAAGATACAGGGAATTGGAAGAGCTACAAAGGCAAAAAGAAGAGGCTATTAAGAGGAAAAAACAGGATGAAGAGGAACAGCGTCTTAAACAGATGAAAGTATTGGGTAAAAACAAATCACGGCCGAAGCTATCATTTGCCATTGGCTCCAAATAAAAACATGTCAAGAAGAAACGTAAGTAAATGCTTCAATTTGGGATGACATATTTTTTGCTTAATGCCAGTCCATTTTTCTTATGAAACTCAGTCTTCGTCTACATCATAAATGCTTCGCCAATTTCCCACGCCCTCACCCCATAAAAAACCCCTAAATCCAACAAGGAATGATAATAGAGTATGCTTGCAATGTCAGTGTTAGGAACGCATTGCATGTAGCCCTTTTGAGAGGAGAACAGACCATTTTTCTCTGCAATCTTTCAACCACAAAGTATGCACTATCTTTCAAACCCGTGTTCTCTTACGTGACTTTCTTATTTGGGTTACTAGATGTGTATTTACTACTCTACACATGATTCACACGCCTTTTGGGCCTCGTACTAGTCGGATTAGCGTCTCTGGTGTTGTTGTCGGGCACTTGAAAGGAATAGCGACCGTCATATTATCATATTAAACATGACGATCACGTTTGTACTCATCATTAGAGAAA ATGCCACGGGATTTATCACGATCTCGATCTCCTTCGTATAGGCGGAGGCTTTCACCATCTCCATTAGGGCATAGGTATACCAGGAGAAGTCGAAGAGACAGGAGCCGTTCACCGTATTCATCGTACAGCAGAAGAAAAAGCCGCTCCATTTCCCCCCCAAGGCGTTATAGAAATCGTTCACGAACACCTAGACGCCATAGAAGTCGTTCTCCAACTTCAAGGAGTTGCAAGAAGTCAAGGCGACGAAGTTCCTCATCATCTGTGCATCATAGATCTTCTAGTTCTAGCCTTGGATCCATTGAGCAAAAAAGTACCAGTGAAAAATTGAAAAAGGAAGAGGAAGAAAGGAAAAGGCGACAACAGGAGACAGAGGCCAAATTACTCAAAGAAGAAACAGAAAAGAGAGTGGAAGAAGCGATTCGCAAGGAAGTCGAAGAGGGCCTGAACTCCGGGGATGTTAAACAGGAAATAAACAGGAAGTTGGAGGAGGGACGGAGAAGGCTTGCCGAAGAAGTGACAGCTCAACTCGAGAAGGAAAAGGAAGCTGCCCTTGTTGAGGCCAGACGGAAAGAGGAACAAGCTCGAAAAGAAAAAGAAGACCGAGAAAGGATGGTCGAGGAGAGCCGGAGGAGAGTAGAGGAGGCTCAGAGAAGGGAGGCTTTAGAGAGACAAAAGAGAGAGGAGGAAAGATACAGGGAATTGGAAGAGCTACAAAGGCAAAAAGAAGAGGCTATTAAGAGGAAAAAACAGGATGAAGAGGAACAGCGTCTTAAACAGATGAAAGTATTGGGTAAAAACAAATCACGGCCGAAGCTATCATTTGCCATTGGCTCCAAATAA MPRDLSRSRSPSYRRRLSPSPLGHRYTRRSRRDRSRSPYSSYSRRKSRSISPPRRYRNRSRTPRRHRSRSPTSRSCKKSRRRSSSSSVHHRSSSSSLGSIEQKSTSEKLKKEEEERKRRQQETEAKLLKEETEKRVEEAIRKEVEEGLNSGDVKQEINRKLEEGRRRLAEEVTAQLEKEKEAALVEARRKEEQARKEKEDRERMVEESRRRVEEAQRREALERQKREEERYRELEELQRQKEEAIKRKKQDEEEQRLKQMKVLGKNKSRPKLSFAIGSK Homology
BLAST of Cp4.1LG15g02740 vs. ExPASy Swiss-Prot
Match: P0CB26 (Uncharacterized protein At1g10890 OS=Arabidopsis thaliana OX=3702 GN=At1g10890 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 1.1e-65 Identity = 189/285 (66.32%), Postives = 234/285 (82.11%), Query Frame = 0
BLAST of Cp4.1LG15g02740 vs. ExPASy Swiss-Prot
Match: Q3UL36 (Arginine and glutamate-rich protein 1 OS=Mus musculus OX=10090 GN=Arglu1 PE=1 SV=2) HSP 1 Score: 72.8 bits (177), Expect = 7.0e-12 Identity = 99/279 (35.48%), Postives = 167/279 (59.86%), Query Frame = 0
BLAST of Cp4.1LG15g02740 vs. ExPASy Swiss-Prot
Match: Q5BJT0 (Arginine and glutamate-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Arglu1 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 7.0e-12 Identity = 99/279 (35.48%), Postives = 167/279 (59.86%), Query Frame = 0
BLAST of Cp4.1LG15g02740 vs. ExPASy Swiss-Prot
Match: Q2TA42 (Arginine and glutamate-rich protein 1 OS=Bos taurus OX=9913 GN=ARGLU1 PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 9.1e-12 Identity = 99/281 (35.23%), Postives = 165/281 (58.72%), Query Frame = 0
BLAST of Cp4.1LG15g02740 vs. ExPASy Swiss-Prot
Match: Q9NWB6 (Arginine and glutamate-rich protein 1 OS=Homo sapiens OX=9606 GN=ARGLU1 PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 9.1e-12 Identity = 99/281 (35.23%), Postives = 165/281 (58.72%), Query Frame = 0
BLAST of Cp4.1LG15g02740 vs. NCBI nr
Match: XP_023553933.1 (uncharacterized protein At1g10890-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553934.1 uncharacterized protein At1g10890-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 441 bits (1133), Expect = 5.27e-154 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of Cp4.1LG15g02740 vs. NCBI nr
Match: XP_022963577.1 (uncharacterized protein At1g10890-like isoform X1 [Cucurbita moschata] >XP_022963578.1 uncharacterized protein At1g10890-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 427 bits (1099), Expect = 7.64e-149 Identity = 275/279 (98.57%), Postives = 277/279 (99.28%), Query Frame = 0
BLAST of Cp4.1LG15g02740 vs. NCBI nr
Match: XP_022967390.1 (uncharacterized protein At1g10890-like isoform X1 [Cucurbita maxima] >XP_022967391.1 uncharacterized protein At1g10890-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 427 bits (1099), Expect = 7.64e-149 Identity = 275/279 (98.57%), Postives = 277/279 (99.28%), Query Frame = 0
BLAST of Cp4.1LG15g02740 vs. NCBI nr
Match: XP_038888585.1 (uncharacterized protein At1g10890 isoform X1 [Benincasa hispida] >XP_038888586.1 uncharacterized protein At1g10890 isoform X1 [Benincasa hispida]) HSP 1 Score: 377 bits (969), Expect = 4.65e-129 Identity = 251/279 (89.96%), Postives = 263/279 (94.27%), Query Frame = 0
BLAST of Cp4.1LG15g02740 vs. NCBI nr
Match: XP_004140106.1 (uncharacterized protein At1g10890 isoform X2 [Cucumis sativus] >XP_011657529.1 uncharacterized protein At1g10890 isoform X2 [Cucumis sativus] >XP_011657531.1 uncharacterized protein At1g10890 isoform X2 [Cucumis sativus] >KGN47923.1 hypothetical protein Csa_003634 [Cucumis sativus]) HSP 1 Score: 374 bits (961), Expect = 7.39e-128 Identity = 250/279 (89.61%), Postives = 262/279 (93.91%), Query Frame = 0
BLAST of Cp4.1LG15g02740 vs. ExPASy TrEMBL
Match: A0A6J1HRW3 (uncharacterized protein At1g10890-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466935 PE=4 SV=1) HSP 1 Score: 427 bits (1099), Expect = 3.70e-149 Identity = 275/279 (98.57%), Postives = 277/279 (99.28%), Query Frame = 0
BLAST of Cp4.1LG15g02740 vs. ExPASy TrEMBL
Match: A0A6J1HI71 (uncharacterized protein At1g10890-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463875 PE=4 SV=1) HSP 1 Score: 427 bits (1099), Expect = 3.70e-149 Identity = 275/279 (98.57%), Postives = 277/279 (99.28%), Query Frame = 0
BLAST of Cp4.1LG15g02740 vs. ExPASy TrEMBL
Match: A0A0A0KEG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411270 PE=4 SV=1) HSP 1 Score: 374 bits (961), Expect = 3.58e-128 Identity = 250/279 (89.61%), Postives = 262/279 (93.91%), Query Frame = 0
BLAST of Cp4.1LG15g02740 vs. ExPASy TrEMBL
Match: A0A5A7UT49 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00230 PE=4 SV=1) HSP 1 Score: 369 bits (947), Expect = 4.65e-126 Identity = 250/279 (89.61%), Postives = 262/279 (93.91%), Query Frame = 0
BLAST of Cp4.1LG15g02740 vs. ExPASy TrEMBL
Match: A0A6J1DUF6 (uncharacterized protein At1g10890 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024448 PE=4 SV=1) HSP 1 Score: 364 bits (934), Expect = 4.57e-124 Identity = 242/279 (86.74%), Postives = 264/279 (94.62%), Query Frame = 0
BLAST of Cp4.1LG15g02740 vs. TAIR 10
Match: AT1G10890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: petal, flower, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13340.1); Has 11769 Blast hits to 8435 proteins in 698 species: Archae - 22; Bacteria - 971; Metazoa - 5937; Fungi - 1065; Plants - 592; Viruses - 101; Other Eukaryotes - 3081 (source: NCBI BLink). ) HSP 1 Score: 244.2 bits (622), Expect = 1.2e-64 Identity = 189/293 (64.51%), Postives = 234/293 (79.86%), Query Frame = 0
BLAST of Cp4.1LG15g02740 vs. TAIR 10
Match: AT5G13340.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 164.1 bits (414), Expect = 1.6e-40 Identity = 139/277 (50.18%), Postives = 182/277 (65.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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