Cp4.1LG15g00130 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g00130
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	beta-carotene isomerase D27, chloroplastic-like isoform X2
Location	Cp4.1LG15: 96225 .. 99860 (+)
RNA-Seq Expression	Cp4.1LG15g00130
Synteny	Cp4.1LG15g00130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTAAGAGTTGGTGAGGTAAGGAGAGTGATTTTGGGAAGTGGGACAAACGTGAGGAGAAGCAACAAAACGAAGAAGATGAGAAGAAAAAGCATTGCCTGTGTAGCAGTGCTTACAAGAGCAGCAGAGAGTGGAGCAACAGAAGAAACAAGAAAACCAAACACTGTTTATGCAGACAACTGGTTTGAGAAAATAGCCATCCACCATGTATCTCAGGCAGTACAAGCAACCTCAGGTGATCTCTTTTCTTTTCTGTTTTGAAGATTTGGACAATAGAATTACTTATGATGTATATTCAGGTTGGAGAAGCAAGAAGAGTGGATATGAAAGCTTGGTGGAAGTGGCAACAATGGCGTCAAGAAACTACAATCAGATCAAACAAAGAGAGGTTATCATTCAGGCGCTTGGAAGAGCATTTCCAGCTCCAATCCTCTCTTTGGTAAATTTCATTCATTCAATATCATTTACTATTCTTTTGACTTTCAATGTATTTATGATATAAATGCATATCATGCATATATGTAAAATACTATCACCAAACATATCGTTGAAGATTTTACCAATACCAATTTCAATTCTACCATCATTTTACTCTCACCACTCCCTCAAATATTATTGCTAAAAGTAATTTCAAAAGTCATATCTTTATTTTTCTAGGCGGCTCTAAGTTATTTATTTACCTATGATATTAGGTGATAAAAGCAATAAATGTTTCCACATCAATAGAAGTTCATTATTAAATAACATTTGTAAGGTAAGTGGTGCATGATCATTTGATGAATTTCATTTAGGCCAAATTTCAATACTTTGTCTTCCTTATTTGGTCTCCCTTCTTCTTCCCATTTGTTTGTTTAAGTATTGACATAGTTAAGTTTTTTACCATAACCTATAAGCTAAAACTTTTAAGTTGATTGTGGTATCAGAGCATGAGGTTATGTGTCCTGTGTTTGCACCCTATAATATAATCTTCTGATTTTCTGCTTTCCAACTTAAATTCGTAGGATTCAACACATTTTGGGGGATATAGCTAGGTTTCATTGCCTAGGTTAGAACCTACCTAGAACTATACCCTTTTCTAATTTTTCTTTCCATTAATCATGGGGTATAATAGTTATTTGATTGGCATGTCATTATATGGAAATAGTATCAGCAAATGATCACATTTTATATTATATTTCTAATTATCAGCAATTATTCGATTAAAGAAGTATTAAAACTGTACTTTTACTATTCTTGATCCATTTCCAATTTCGCCTTTTACTATTAAAACCCCACCCCTCTCAATCGTATGTCCCTAACAAATATAGTGGTGAACAAAGTGCAGATAAGAACATTGCTACCTCAATCCAAATTCGCAAGGGAATATTTTGCTGCATTCACCACTGTCTTCTTTGCTTGGTTAGTTGGACCCTGCGAGGTAAGATGTTGTAAATAAATTTAGCCAAGGACATAATTGGGAATTAACATCAATCCATGGACATAATTGGGAATTAACGGCTGCTTGTATACATGTACATTTGGTTAAAGCATATATTATCGACCAAAAAGTCAAAAGTTCGAATTCCTACTCCAAAGAGAGATGGTTCTGTCATAGGGCTTAGGATCGGTGTCAAAAAAAAATTCAGAATATAGAGTATTTAAACATTCAACAAACAAGGTCAGAATAGAGATAGATTCCAGCTAATGGTGGACACAAGAACTTCAACTTTAGCACTAAATTCAATATAATAATATGATTTTCAATGGCCAAGTTGATAAACCTGCAGTGTTTGAGGCACTAGTCCCTTCTAGACTTGTCCTGTCCCTACAAATGAAAGAAAGGTTTTGTGACGTAAGATAGATAAAACTATTTTTTAAGAAACTATCTTCTCTTCATGCTTACTCTCTTTGGCCTTTCACTTTCTAGGCATTCCTTAAGAACTCAGATTAAACACAATTGATATGTCTAGTTTGTTGGGGAGGGAGTGATTGAAAAAGATTTTTAAGCAAAACAACTAAACAATGCAGGAGCCATTCCCTACGCACACACAAATGGAAGAAGCAAGTCTCCTTCTCAATTACTAATTCGCAACACTGACAATAGTAACATATGATTCTTACAGGTGAAGGAATCAGACTTCAAAGGAAAAAGAGAAAAAAATGTGGTTCAAATCCACAAGTGCAGGTAATTCTTTCTCGCAACAGAGTTCTATAATTAAGGCAATATTCTCTAACCGTTCATGGGGTCCCATCTCACCTGCTTGAGACAATTTCCACGCCCACAGAACCTTCTGTCTGTAATTATTATGCTTATTCTAAACTCTCAGTACTTAATCACAGTAAGTCATGTCCATCATTCACATCATTGAAAATTTGAAATTATCGTTGTCAAAATAACACTCGGCAAATATATATTGTGCCTAAACATATCCCATTTATTTGCAGGTTCCTAGAGCAAACTAACTGTGCTGGAATGTGCATTAATCTATGCAAGTTTCCATGTCAGGATTTCATCAAGGATTCTTTAGGAATGCCAGTCAGCATGGTCCCCAGTAAGTCTCCTCTCACTAAGCTATAAAACCACCGAACAATTGCGGCAACCATATACGGTTTTCCCAAAAGAAAAACAAAATTTCAAATTCACATAGACTGCAGCACAAGGCAATTCTAGACACTAGTTCAAGCTGTCTAACTCTAACTGAAGGCCATATTTCTTTTTTCTCGTATCCATAGTGTTCAGGTTTGTTTGCACACACCACTACTATTCTTACAAGATAATTGTCTGACTCTATTTAGTTTGGTTGCCAAAAAAAAAAAAAAAATCATAGGATATTAAACACAATTAAGCAGGTGAGTACAATGGCTAGAGCTCGTTCTCTCTAAGTTTTTTCCTATTTTCATGGGCTCTTTTTTATCATTAAACTAAATCATGGTGGTTAACTCAAAAGGCCATTATAAAAACTTCATATCCACATATAGAACATTAGAATTAAATTATTTCAAGACCTCTATATGGTTTAGATGAGAGGACACTAAATAAAGTAAATCTGCTATAGCGCAATGACTGGTAGATCCATGAGTAAAAGTGAAATTACTATTAAAGCAACATTACCAGCACCAAATGGTGGAAAGGATCATGGTTGTCAATGTGAATGGAGGGTCCCATGCACGAACCATTTTGGGTACAAAAGAACTGCAGATAGGCCCATCCAAGCTAAGTGGGATTTCTAACCTGCAGCTTAATTTTGCAATATGGTTATAATCCAAGAGTTAGAAGCTGAATTCCCATCGTTAATTAATCATCAAGCTGGATTTCCCACTGAGCCAGGTATCGCTCTTGGTCATGATATACATCAATCATCACAGGTGTAAAAAATGCAACCAAGCAAAGGCATTTTTCTTAGGCGTTAATTATGCACCATGATGTAACTAATAGCTGGGAACCACTAGTATTAATGTCAAAGACCAAGAAACACGTCAATAAGCAAGGGGAATCTGGGAGCAAATGGGGGCGGCAAGAAGTATTTAAAAATATGATTAAAATAAGTGTCTTTCTTTGCAGATTTTGATGACATGAGCTGTGAGATGATATTTGGAAAGGATCCACCGGCTGCAGTCGATGATCCAGCGCTTAAGCAACCATGTTACAAACTA

mRNA sequence

ATGGAAGTAAGGAGAGTGATTTTGGGAAGTGGGACAAACGTGAGGAGAAGCAACAAAACGAAGAAGATGAGAAGAAAAAGCATTGCCTGTGTAGCAGTGCTTACAAGAGCAGCAGAGAGTGGAGCAACAGAAGAAACAAGAAAACCAAACACTGTTTATGCAGACAACTGGTTTGAGAAAATAGCCATCCACCATGTATCTCAGGCAGTACAAGCAACCTCAGGTTGGAGAAGCAAGAAGAGTGGATATGAAAGCTTGGTGGAAGTGGCAACAATGGCGTCAAGAAACTACAATCAGATCAAACAAAGAGAGGTTATCATTCAGGCGCTTGGAAGAGCATTTCCAGCTCCAATCCTCTCTTTGATAAGAACATTGCTACCTCAATCCAAATTCGCAAGGGAATATTTTGCTGCATTCACCACTGTCTTCTTTGCTTGGTTAGTTGGACCCTGCGAGGTGAAGGAATCAGACTTCAAAGGAAAAAGAGAAAAAAATGTGGTTCAAATCCACAAGTGCAGGTTCCTAGAGCAAACTAACTGTGCTGGAATGTGCATTAATCTATGCAAGTTTCCATGTCAGGATTTCATCAAGGATTCTTTAGGAATGCCAGTCAGCATGGTCCCCAATTTTGATGACATGAGCTGTGAGATGATATTTGGAAAGGATCCACCGGCTGCAGTCGATGATCCAGCGCTTAAGCAACCATGTTACAAACTA

Coding sequence (CDS)

ATGGAAGTAAGGAGAGTGATTTTGGGAAGTGGGACAAACGTGAGGAGAAGCAACAAAACGAAGAAGATGAGAAGAAAAAGCATTGCCTGTGTAGCAGTGCTTACAAGAGCAGCAGAGAGTGGAGCAACAGAAGAAACAAGAAAACCAAACACTGTTTATGCAGACAACTGGTTTGAGAAAATAGCCATCCACCATGTATCTCAGGCAGTACAAGCAACCTCAGGTTGGAGAAGCAAGAAGAGTGGATATGAAAGCTTGGTGGAAGTGGCAACAATGGCGTCAAGAAACTACAATCAGATCAAACAAAGAGAGGTTATCATTCAGGCGCTTGGAAGAGCATTTCCAGCTCCAATCCTCTCTTTGATAAGAACATTGCTACCTCAATCCAAATTCGCAAGGGAATATTTTGCTGCATTCACCACTGTCTTCTTTGCTTGGTTAGTTGGACCCTGCGAGGTGAAGGAATCAGACTTCAAAGGAAAAAGAGAAAAAAATGTGGTTCAAATCCACAAGTGCAGGTTCCTAGAGCAAACTAACTGTGCTGGAATGTGCATTAATCTATGCAAGTTTCCATGTCAGGATTTCATCAAGGATTCTTTAGGAATGCCAGTCAGCATGGTCCCCAATTTTGATGACATGAGCTGTGAGATGATATTTGGAAAGGATCCACCGGCTGCAGTCGATGATCCAGCGCTTAAGCAACCATGTTACAAACTA

Protein sequence

MEVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYADNWFEKIAIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL

Homology

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BLAST of Cp4.1LG15g00130 vs. ExPASy Swiss-Prot
Match: R4HZ96 (Beta-carotene isomerase D27, chloroplastic OS=Medicago truncatula OX=3880 GN=D27 PE=1 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.3e-78
Identity = 138/221 (62.44%), Postives = 175/221 (79.19%), Query Frame = 0


Query: 19  KTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYADNWFEKIAIHHVSQAVQATSGWRS 78
           K  +++ K    V VL R  +   +EET +   VY DNWF+K+AI+H+S++VQA +G  +
Sbjct: 20  KKLRLKPKHTFVVGVLARPTDD-ISEETLRKTNVYKDNWFDKLAINHLSKSVQAATGISN 79

Query: 79  KKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSLIRTLLPQSKFAREYFAA 138
            KSG++SLVE AT+AS+ +N  +Q+ +I+ AL RAFP PILS+IR ++P SK AREYFA 
Sbjct: 80  NKSGFDSLVEAATVASQKFNTTQQQGIILDALDRAFPKPILSVIRRVMPPSKLAREYFAV 139

Query: 139 FTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKD 198
           FTT+FFAWL+GP EV+ES+  G+REKN+V I KCRFLE+TNC GMCINLCK P Q FIKD
Sbjct: 140 FTTIFFAWLLGPSEVRESEINGRREKNIVHIKKCRFLEETNCVGMCINLCKMPSQLFIKD 199

Query: 199 SLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL 240
           S GMPV+MVPNFDDMSCEMIFG++PPA+ DDPALKQPCYKL
Sbjct: 200 SFGMPVNMVPNFDDMSCEMIFGQEPPASTDDPALKQPCYKL 239

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BLAST of Cp4.1LG15g00130 vs. ExPASy Swiss-Prot
Match: C7AU21 (Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=D27 PE=1 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 5.0e-67
Identity = 126/234 (53.85%), Postives = 164/234 (70.09%), Query Frame = 0


Query: 23  MRRKSIACVAVLTRAAESGATEETRK------------------PNTVYADNWFEKIAIH 82
           MRR      AV+ R  E+ A+   +K                  P TVY D+WF+K+AI 
Sbjct: 32  MRRCCSTVRAVMARPQEAPASAPAKKTETAAMMSTVQTETAAAPPATVYRDSWFDKLAIG 91

Query: 83  HVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSLIRT 142
           ++S+ +Q  SG +++K GYESL++ A   SR ++  KQ E++ QAL RA P+ IL++I+ 
Sbjct: 92  YLSRNLQEASGLKNEKDGYESLIDAALAISRIFSLDKQSEIVTQALERALPSYILTMIKV 151

Query: 143 LLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCAGMC 202
           ++P S+F+REYFAAFTT+FF WLVGPCEV ES+ +G++EKNVV I KCRFLE TNC GMC
Sbjct: 152 MMPPSRFSREYFAAFTTIFFPWLVGPCEVMESEVEGRKEKNVVYIPKCRFLESTNCVGMC 211

Query: 203 INLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYK 239
            NLCK PCQ FI+DSLGM V M PNF+DMSCEMIFG+ PP   DDPALKQPC++
Sbjct: 212 TNLCKIPCQKFIQDSLGMKVYMSPNFEDMSCEMIFGQQPPE--DDPALKQPCFR 263

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BLAST of Cp4.1LG15g00130 vs. ExPASy Swiss-Prot
Match: Q7XA78 (Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=D27 PE=1 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.5e-55
Identity = 103/207 (49.76%), Postives = 146/207 (70.53%), Query Frame = 0


Query: 34  LTRAAESGATEETRKPNTVYADNWFEKIAIHHVSQAVQATSG--WRSKKSGYESLVEVAT 93
           L  A E+   E +   N    D++F KIAI+++S+ +Q  +G    SK + Y+ LV+ AT
Sbjct: 46  LKAAKETARIETSNTKNASIEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTAT 105

Query: 94  MASRNYNQIKQREVIIQALGRAFPAPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPC 153
             SRN++  +Q E ++ +L RA P  I SLI+   P SK +RE FA FTT+ FAWLVGP 
Sbjct: 106 RVSRNFDTKQQHEFVLSSLDRALPTVISSLIKMAFPPSKVSRELFALFTTISFAWLVGPS 165

Query: 154 EVKESDFKGKREKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFD 213
           EV+E++  G++EK+VV I KCRFLEQ+NC GMC ++CK P Q FIK+SLGMP+ M P+F+
Sbjct: 166 EVRETEVNGRKEKSVVYIEKCRFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPDFN 225

Query: 214 DMSCEMIFGKDPPAAVDDPALKQPCYK 239
           D+SC+M+FG++PP   DDPA+KQPC++
Sbjct: 226 DLSCKMMFGREPPEIEDDPAMKQPCFE 252

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BLAST of Cp4.1LG15g00130 vs. NCBI nr
Match: XP_023511676.1 (beta-carotene isomerase D27, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 479 bits (1234), Expect = 1.94e-170
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 2   EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYADNWFEKI 61
           EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYADNWFEKI
Sbjct: 7   EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYADNWFEKI 66

Query: 62  AIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL 121
           AIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL
Sbjct: 67  AIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL 126

Query: 122 IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA 181
           IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA
Sbjct: 127 IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA 186

Query: 182 GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL 239
           GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL
Sbjct: 187 GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL 244

[Close]

BLAST of Cp4.1LG15g00130 vs. NCBI nr
Match: XP_023511673.1 (beta-carotene isomerase D27, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023511675.1 beta-carotene isomerase D27, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 479 bits (1234), Expect = 3.48e-170
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 2   EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYADNWFEKI 61
           EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYADNWFEKI
Sbjct: 7   EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYADNWFEKI 66

Query: 62  AIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL 121
           AIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL
Sbjct: 67  AIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL 126

Query: 122 IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA 181
           IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA
Sbjct: 127 IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA 186

Query: 182 GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL 239
           GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL
Sbjct: 187 GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL 244

[Close]

BLAST of Cp4.1LG15g00130 vs. NCBI nr
Match: XP_022963901.1 (beta-carotene isomerase D27, chloroplastic-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 476 bits (1225), Expect = 4.58e-169
Identity = 236/238 (99.16%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 2   EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYADNWFEKI 61
           EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVY DNWFEKI
Sbjct: 7   EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYTDNWFEKI 66

Query: 62  AIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL 121
           AIHHVSQAVQATSGWRS KSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL
Sbjct: 67  AIHHVSQAVQATSGWRSNKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL 126

Query: 122 IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA 181
           IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA
Sbjct: 127 IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA 186

Query: 182 GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL 239
           GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL
Sbjct: 187 GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL 244

[Close]

BLAST of Cp4.1LG15g00130 vs. NCBI nr
Match: XP_022963900.1 (beta-carotene isomerase D27, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 476 bits (1225), Expect = 9.83e-169
Identity = 236/238 (99.16%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 2   EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYADNWFEKI 61
           EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVY DNWFEKI
Sbjct: 7   EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYTDNWFEKI 66

Query: 62  AIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL 121
           AIHHVSQAVQATSGWRS KSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL
Sbjct: 67  AIHHVSQAVQATSGWRSNKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL 126

Query: 122 IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA 181
           IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA
Sbjct: 127 IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA 186

Query: 182 GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL 239
           GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL
Sbjct: 187 GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL 244

[Close]

BLAST of Cp4.1LG15g00130 vs. NCBI nr
Match: XP_022967515.1 (beta-carotene isomerase D27, chloroplastic-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 474 bits (1221), Expect = 1.86e-168
Identity = 235/238 (98.74%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 2   EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYADNWFEKI 61
           E RRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVY DNWFEKI
Sbjct: 7   EERRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYTDNWFEKI 66

Query: 62  AIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL 121
           AIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL
Sbjct: 67  AIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL 126

Query: 122 IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA 181
           IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGK+EKNVVQIHKCRFLEQTNCA
Sbjct: 127 IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKKEKNVVQIHKCRFLEQTNCA 186

Query: 182 GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL 239
           GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL
Sbjct: 187 GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL 244

[Close]

BLAST of Cp4.1LG15g00130 vs. ExPASy TrEMBL
Match: A0A6J1HHC5 (beta-carotene isomerase D27, chloroplastic-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111464069 PE=4 SV=1)

HSP 1 Score: 476 bits (1225), Expect = 2.22e-169
Identity = 236/238 (99.16%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 2   EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYADNWFEKI 61
           EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVY DNWFEKI
Sbjct: 7   EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYTDNWFEKI 66

Query: 62  AIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL 121
           AIHHVSQAVQATSGWRS KSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL
Sbjct: 67  AIHHVSQAVQATSGWRSNKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL 126

Query: 122 IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA 181
           IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA
Sbjct: 127 IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA 186

Query: 182 GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL 239
           GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL
Sbjct: 187 GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL 244

[Close]

BLAST of Cp4.1LG15g00130 vs. ExPASy TrEMBL
Match: A0A6J1HJA1 (beta-carotene isomerase D27, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464069 PE=4 SV=1)

HSP 1 Score: 476 bits (1225), Expect = 4.76e-169
Identity = 236/238 (99.16%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 2   EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYADNWFEKI 61
           EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVY DNWFEKI
Sbjct: 7   EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYTDNWFEKI 66

Query: 62  AIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL 121
           AIHHVSQAVQATSGWRS KSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL
Sbjct: 67  AIHHVSQAVQATSGWRSNKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL 126

Query: 122 IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA 181
           IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA
Sbjct: 127 IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA 186

Query: 182 GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL 239
           GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL
Sbjct: 187 GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL 244

[Close]

BLAST of Cp4.1LG15g00130 vs. ExPASy TrEMBL
Match: A0A6J1HUP9 (beta-carotene isomerase D27, chloroplastic-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111466998 PE=4 SV=1)

HSP 1 Score: 474 bits (1221), Expect = 9.02e-169
Identity = 235/238 (98.74%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 2   EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYADNWFEKI 61
           E RRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVY DNWFEKI
Sbjct: 7   EERRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYTDNWFEKI 66

Query: 62  AIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL 121
           AIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL
Sbjct: 67  AIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL 126

Query: 122 IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA 181
           IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGK+EKNVVQIHKCRFLEQTNCA
Sbjct: 127 IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKKEKNVVQIHKCRFLEQTNCA 186

Query: 182 GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL 239
           GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL
Sbjct: 187 GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL 244

[Close]

BLAST of Cp4.1LG15g00130 vs. ExPASy TrEMBL
Match: A0A6J1HLI8 (beta-carotene isomerase D27, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464069 PE=4 SV=1)

HSP 1 Score: 476 bits (1225), Expect = 9.14e-169
Identity = 236/238 (99.16%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 2   EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYADNWFEKI 61
           EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVY DNWFEKI
Sbjct: 7   EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYTDNWFEKI 66

Query: 62  AIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL 121
           AIHHVSQAVQATSGWRS KSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL
Sbjct: 67  AIHHVSQAVQATSGWRSNKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL 126

Query: 122 IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA 181
           IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA
Sbjct: 127 IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA 186

Query: 182 GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL 239
           GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL
Sbjct: 187 GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL 244

[Close]

BLAST of Cp4.1LG15g00130 vs. ExPASy TrEMBL
Match: A0A6J1HWX8 (beta-carotene isomerase D27, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466998 PE=4 SV=1)

HSP 1 Score: 474 bits (1221), Expect = 1.94e-168
Identity = 235/238 (98.74%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 2   EVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYADNWFEKI 61
           E RRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVY DNWFEKI
Sbjct: 7   EERRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYTDNWFEKI 66

Query: 62  AIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL 121
           AIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL
Sbjct: 67  AIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSL 126

Query: 122 IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCA 181
           IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGK+EKNVVQIHKCRFLEQTNCA
Sbjct: 127 IRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKKEKNVVQIHKCRFLEQTNCA 186

Query: 182 GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL 239
           GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL
Sbjct: 187 GMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPCYKL 244

[Close]

BLAST of Cp4.1LG15g00130 vs. TAIR 10
Match: AT1G03055.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 143 Blast hits to 143 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 217.6 bits (553), Expect = 1.1e-56
Identity = 103/207 (49.76%), Postives = 146/207 (70.53%), Query Frame = 0


Query: 34  LTRAAESGATEETRKPNTVYADNWFEKIAIHHVSQAVQATSG--WRSKKSGYESLVEVAT 93
           L  A E+   E +   N    D++F KIAI+++S+ +Q  +G    SK + Y+ LV+ AT
Sbjct: 46  LKAAKETARIETSNTKNASIEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTAT 105

Query: 94  MASRNYNQIKQREVIIQALGRAFPAPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPC 153
             SRN++  +Q E ++ +L RA P  I SLI+   P SK +RE FA FTT+ FAWLVGP 
Sbjct: 106 RVSRNFDTKQQHEFVLSSLDRALPTVISSLIKMAFPPSKVSRELFALFTTISFAWLVGPS 165

Query: 154 EVKESDFKGKREKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFD 213
           EV+E++  G++EK+VV I KCRFLEQ+NC GMC ++CK P Q FIK+SLGMP+ M P+F+
Sbjct: 166 EVRETEVNGRKEKSVVYIEKCRFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPDFN 225

Query: 214 DMSCEMIFGKDPPAAVDDPALKQPCYK 239
           D+SC+M+FG++PP   DDPA+KQPC++
Sbjct: 226 DLSCKMMFGREPPEIEDDPAMKQPCFE 252

[Close]

BLAST of Cp4.1LG15g00130 vs. TAIR 10
Match: AT1G64680.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-37
Identity = 78/214 (36.45%), Postives = 121/214 (56.54%), Query Frame = 0


Query: 36  RAAESGATEETRKP-----NTVYADNWFEKIAIHHVSQAVQATSGWRSKKS--------G 95
           R+   G  E + +P      T Y D   E++ +   ++ +      + K +         
Sbjct: 17  RSTRCGIAEPSGEPAPMGLKTRYEDGLVERVFMGLFARKMDKFGSKKKKDTKEKGFWEYD 76

Query: 96  YESLVEVATMASRNYNQIKQREVIIQALGRAFPAPILSLIRTLLPQSKFAREYFAAFTTV 155
           YES VEV+    +  ++++Q+E + + L    P       R L P +K+A E+ AA T  
Sbjct: 77  YESFVEVSKRVMQGRSRVQQQEAVREVLLSMLPPGAPEQFRKLFPPTKWAAEFNAALTVP 136

Query: 156 FFAWLVGPCEVKESDFKGKREKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGM 215
           FF WLVGP +V E +  G ++++ V+I KCR+LE + C GMC+N+CK P QDF  +  G+
Sbjct: 137 FFHWLVGPSQVIEVEVNGVKQRSGVRIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGL 196

Query: 216 PVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQPC 237
           P++M PN++DMSCEMI+G+ PPA  +D A KQPC
Sbjct: 197 PLTMNPNYEDMSCEMIYGQAPPAFEEDVATKQPC 230

[Close]

BLAST of Cp4.1LG15g00130 vs. TAIR 10
Match: AT1G03055.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 120.2 bits (300), Expect = 2.3e-27
Identity = 63/142 (44.37%), Postives = 91/142 (64.08%), Query Frame = 0


Query: 34  LTRAAESGATEETRKPNTVYADNWFEKIAIHHVSQAVQATSG--WRSKKSGYESLVEVAT 93
           L  A E+   E +   N    D++F KIAI+++S+ +Q  +G    SK + Y+ LV+ AT
Sbjct: 46  LKAAKETARIETSNTKNASIEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTAT 105

Query: 94  MASRNYNQIKQREVIIQALGRAFPAPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPC 153
             SRN++  +Q E ++ +L RA P  I SLI+   P SK +RE FA FTT+ FAWLVGP 
Sbjct: 106 RVSRNFDTKQQHEFVLSSLDRALPTVISSLIKMAFPPSKVSRELFALFTTISFAWLVGPS 165

Query: 154 EVKESDFKGKREKNVVQIHKCR 174
           EV+E++  G++EK+VV I KCR
Sbjct: 166 EVRETEVNGRKEKSVVYIEKCR 187

[Close]

BLAST of Cp4.1LG15g00130 vs. TAIR 10
Match: AT4G01995.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 106.7 bits (265), Expect = 2.7e-23
Identity = 77/243 (31.69%), Postives = 123/243 (50.62%), Query Frame = 0


Query: 5   RVILGSGTNVRRSN--KTKKMRRKSIACVAVLTRAAES--GATEETRKPNTVYADNWFEK 64
           +V+L   T +  SN   TK +  + + C    +   +S  GA +   KP  +  D++F +
Sbjct: 6   QVLLPPPTTIVFSNSFSTKLILTRRLRCRISNSSEVKSDEGAPKLEYKPGPL--DDFFMQ 65

Query: 65  IAIHHVSQAVQATSGWRSKKSGYESLVE-VATMASRNYNQIKQREVIIQALGRAFPAPIL 124
              + + + V    G  S+K GY  L+E V  +  +   + +  +  ++ L   FP  IL
Sbjct: 66  SFRNKLVEEV----GSDSEKPGYVGLIELVKLLLLKGRTRSETSDAAVRILKSLFPPLIL 125

Query: 125 SLIRTL---LPQSKFAREYFAAFTTVFFAWLVGPCEVKESDF-KGKREKNVVQIHKCRFL 184
            L + L   + Q K A    A  T +   WL+GP +V   D   G+   + V + KC++L
Sbjct: 126 ELYKLLIAPIAQGKLAALMVARVTVLTCQWLMGPSKVNIIDLPNGESWDSGVFVEKCQYL 185

Query: 185 EQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQP 239
           E++ C G+CIN CK P Q F KD +G+P+ M PNF D SC+  FG  PP   DD  + +P
Sbjct: 186 EESKCVGVCINTCKLPTQTFFKDYMGVPLVMEPNFKDYSCQFKFGVAPPE--DDGNVNEP 240

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g00130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
R4HZ96	1.3e-78	62.44	Beta-carotene isomerase D27, chloroplastic OS=Medicago truncatula OX=3880 GN=D27...	[more]
C7AU21	5.0e-67	53.85	Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica OX=39...	[more]
Q7XA78	1.5e-55	49.76	Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=D2...	[more]

BLAST of Cp4.1LG15g00130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023511676.1	1.94e-170	100.00	beta-carotene isomerase D27, chloroplastic-like isoform X2 [Cucurbita pepo subsp...	[more]
XP_023511673.1	3.48e-170	100.00	beta-carotene isomerase D27, chloroplastic-like isoform X1 [Cucurbita pepo subsp...	[more]
XP_022963901.1	4.58e-169	99.16	beta-carotene isomerase D27, chloroplastic-like isoform X3 [Cucurbita moschata]	[more]
XP_022963900.1	9.83e-169	99.16	beta-carotene isomerase D27, chloroplastic-like isoform X2 [Cucurbita moschata]	[more]
XP_022967515.1	1.86e-168	98.74	beta-carotene isomerase D27, chloroplastic-like isoform X3 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG15g00130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HHC5	2.22e-169	99.16	beta-carotene isomerase D27, chloroplastic-like isoform X3 OS=Cucurbita moschata...	[more]
A0A6J1HJA1	4.76e-169	99.16	beta-carotene isomerase D27, chloroplastic-like isoform X2 OS=Cucurbita moschata...	[more]
A0A6J1HUP9	9.02e-169	98.74	beta-carotene isomerase D27, chloroplastic-like isoform X3 OS=Cucurbita maxima O...	[more]
A0A6J1HLI8	9.14e-169	99.16	beta-carotene isomerase D27, chloroplastic-like isoform X1 OS=Cucurbita moschata...	[more]
A0A6J1HWX8	1.94e-168	98.74	beta-carotene isomerase D27, chloroplastic-like isoform X2 OS=Cucurbita maxima O...	[more]

BLAST of Cp4.1LG15g00130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03055.1	1.1e-56	49.76	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G64680.1	1.4e-37	36.45	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G03055.2	2.3e-27	44.37	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G01995.1	2.7e-23	31.69	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025114	Beta-carotene isomerase D27-like, C-terminal	PFAM	PF13225	DUF4033	coord: 146..225 e-value: 3.3E-33 score: 113.5
None	No IPR available	PANTHER	PTHR33591:SF1	BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC	coord: 12..238
IPR038938	Beta-carotene isomerase D27-like	PANTHER	PTHR33591	BETA-CAROTENE ISOMERASE D27	coord: 12..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g00130.1	Cp4.1LG15g00130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010223	secondary shoot formation
biological_process	GO:1901601	strigolactone biosynthetic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0016859	cis-trans isomerase activity
molecular_function	GO:0005506	iron ion binding