Cp4.1LG14g09130 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG14g09130
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	50S ribosomal protein L19
Location	Cp4.1LG14: 7730584 .. 7736458 (-)
RNA-Seq Expression	Cp4.1LG14g09130
Synteny	Cp4.1LG14g09130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAACTGAAATTGACAACGGATAAGAGATCGTCTCCATCTTCTCCAAAGAGAGAAGAAAAATGCAATCACTGCCATAATTTTCTTCAATTCCTTCATCAATGGCCACCAAGATTCTTCCTCAGGTACGGTACTTCCTCCTCTCGTCTTTTTTGTAATCTTTCAGTATTCCCTTTCTAATCTTCTATCGCATTAATCTCATATCTCTTGTTTCAAGGCCGTGATTTCTATTCCAAGAATCCCCAATCAATGTACGCCGAGAAGATTAGGGTTTTGTTCCGCAATTTCTTGTACTCGGCTTTCGTTTTCTACTCTTTCCTCGAGTTCAATCGGCTGCCATTTTCACCATACTGTTTCGGCGCCGATGAAACGGGCGTTTGTTGTGAGAGCTGAGGCGGATTCCGAAGCAGAGTCGGCGAGCGATGAGAAAAATGTGGAAAGAAGCGTTGGAGAAGCTCCTCAAGCTGTAGTAGAAGCAGTAGCGGTGTCTGATGGCCAGCCTGAGGCGGAGAAGCCGCCGAGAAAGCCTCGAGTTAAGCTTGGAGATGTATTGGGGGTAATTATTCTATCCATTCTTCTCATTAATGAACACAAACTTTGTTGTAGTTCTGAATGCTAGAATGTTAGGAATCATAGGAATCATGACGCACTACAATCGTATGATATTGTCTACTTTGAACATAAGCACTCGTGGTATTGGTTTAAACTTCCCCAAAGGCCGCGTAACTAAGGAATTGTATTAGTCAATGTGGGACTCCCTCCCTTCGGATAGAGTACCCTATAGAGCCTCCCTTTAGGCCTATGGAGCCTTTGAAGAGTCCATGAATAAAGTACACCCTTTGTTCGATACTTGTGTCACTTTTGACTACACCTTTGAGGTTCACAACTTATTTGTTCGACATTTGAGGATTCTATTGACATGACTAAGTTAAGGGCATGACTTTGATACCATTTTAGGATTCACGGCCCTCCATAATGGTATGATATTGTCCATTTTGAGCATAAGCTCTCATGACTTTGCTTTCAACTTTCTCAAAAGGCCTCGTACCTAAATTAGCCAATGCAGAACTCCCTCCAACCATCTTCAATTTAGGAACACAATTTTTCTTGCAACCATAAGTGTACTTCTGTACTGGTTCTTTTGAATTATATTCAATTCTTCCGAACGTTTGAATTGTTAAATCAACTGCTGAAGAATTGAAGTGTGATCCTGCGGTTCATAGAAACTCATTACAGTTTTGTGTTGTAGAAGATTTCAGCTATAGTTGGTGAAATTTCACAATATAGGAATTGTCTCATCTACTAGTTAGAGGGTATCATAATTTGAATTTGATTTTAGTTTTGTTGATCTTTAAACTTCTGGGTAGATACTTAATAAGCGAGCAATTGAAGCGTCGGAGAAGGCGAGGCCGATTCCAGACATTAGAACTGGTGACATTGTGGAAATTAAACTGGTAAATTTTGTTCTTAATCTTTGTAGTCTAAACCCTTATGTAAGTGTATGGTTTTTTATACTGTTTTTGATAAAAATGTTACTACTACTACTACTACTACAGGAAGTTCCAGAAAATAGGCGTAGGCTTTCTGTTTATAGAGGAATTGTCATGTCAAAACAAAATGCTGGCATCCACACTACGATTAGAATTCGCAGAATTATTGCTGGTGTGGGCGTGGAGATTGTTTTTCCGCTGTAAGTATTGAGTTCATCTTGATTTCTTTCTGGAATCTAATATATGCTGTCTGTAGAATATGATTTGTGCCCCATTTCAATCCCATTTGCTGATAAACTCATTAAGCACACGGAAGATGTAACACCCTAAACCCACCGCTAGCAGATATTGTTTACTTTGGTCTGTTACGTATCACCGTCAGTCTTACGGTTTTAAAACGCGTCTCTTAGGGAGAGGTTTCCACACCCTTATAAGGAATGCTTTTTCCCCTCTCCAACCGATGTAAGATCTCACAATCTACTCCCTTGGGGGCCCAAAGTTCTTGTTGACACACTGCTCGGTGTCTGGCTCTGATACCATTTGTAACATCCCAAGCCCATCGCTAGCAGATATTGTCCGCTTTGGTCTGTTACGTATCGCCGTCCGCCTCACGGTTTTAAAACGTGTCTCTTAGGGAGAGGTTTCCACACCCTTATAAGAAATGTTTTGTTCTCCTTTCCAACCGACGTGGGATCTCATAATCCATCTCCTTGGGGGACCAACGTCCTTACTGACACACCATCCGGTGTCTGGCTCTGATACCATTTGTAACAGCCCAGGTTCACCACTAGCATATATTGTCTGTTTTGGCCCGTTACGTATAAATGTCAGCCTCACAGTTTTAAAACGCGTCTTTTAGTGAGAGGTTTCTACACCCTTATAAGGAATGTTTTGTTTCCTTCTCTGACCGATGTGGGATCTCACATCAAATTTACCTTCTTTCACTTTCTCGTCCCAATTTTTTAAACAGAGGTGTGAAGAAACTATCTGGATTTGGATGACCTTAGAACACTTGAACCTTATTACAGCTTTTGGTTCCAGAATCTGTTGTTTATTTGAACATAAAATTGATTGTTCTCCAGAACAATCTCACATGCTGATTCAGTTATAAAGCTATACCATCTGGGGTTTGGATGAGTCAAGGAAACTCGCAACTGGTTACATATTTTGGTCTTAAATTCCTCTTTTCAGCATAGTAAAGCATGTTGATGATGGTTTGGAGGGAGTCTCACGTTGGCTAGTTAAGAGGATGATCATAGGTTTGTATGTAGGGAATACCTCTCCATTAGTATGAGGCCTTTTGGGGAAACAAAAACAAAGCCATTAGAGCTTATGTTCAAAGTGGACAATATCATACCATTGTGGAGGTTCGTGATTCCTAACATGGTATCAAAGCCATGTCCTTAACTTAGCCATGTCAATAGAATCTTCAAGTGTTGAACAAAGAAGTTGTGAGCCTCGAAGGTGTAGTTAAAAGTGACTCAAGTGTTGAACAAAGAGTGTACTTTGTTCAAGGGCTCCATAGAAGAGATTGAGCCTCAATTAAGGAGAGGCTATTCGAGGGCTCCATAGGCCTCAGGGGAAGTTCTATGGTGTACTTTATTCGAGGGGAGGATTGTTGAGGATTGTTCGGAGGGAGTCCCACACTGGCCAATCAAGGGGATGATCATAAGTTTATAAGTAAGGAATACATCTCTATTTGTACGAGGCATTTTGAGAAAACCAAAAGCAAAGCCATGAGGGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGGTTCGTGATTCCTAAGAAAACCCCGCCAAACCAACCAAAAATAAGAAGGAAGAAGTACCAAATCCATCAAAATTAGATGAAACCAAAACATGGGCCAATGCTTTGACAGGCTCCTCTTGGCTTGCTGACAAGCAGGTTGTTATCAAAACTTGATGAAATAATAAATATCCGATGCGCTATACTCTAAGCAACGACATACTCGTGCCTGAAGTTCTTGTCGATCGTTAGATACCGGATTGATTTCTTATTTCCTACGCAGTTACTTCTGTGGGATTTGACCTCATGATAACATTCTTCTGCAGGTACTCACCAAACATCAAAGAGCTAAAAGTGGTGAGCCACAGGAAGGTGAGGAGGGCAAGATTGTATTACTTGAGAGACAAACTTCCAAGACTCTCTACTTTCAAGTGAAACACCCCAATGGATTGACCATCAACGTTATGTTTCTTGTTATCATTCAATATTTGCACATTATTCTTCTGTATAGCGTCATTAATTATATATATGAGCAGCAGGGGTTTCATGAAAGGTAATGTCCTGGATTTGCTTCTTTACCATTACTGATCCCATTACTTGGCTTCTTCTCAGTTGTTTTTCCTCATCTTTTAACTTTAAGTTCATGAAGTTGGGCATCTCGAGATCTTTCGGCTGTGAACAAATTAGCCATGGTTCTGTCCCTAATCTTTGAAGACTGGAAGGTTTGGTCTTTCCATCCTTCAATCAGGCGTCTTTACTTCTAACTTTTCCTTTTATAGTTTGGTTTTTACGTCCTTTGTATCCTTCATTCGAGTAGCAACTTCACATGGCACCTAAGAAACTGAGTAGTTGTCCGAAAGATTAGTTGATGAGTCATCTGGTAATCGCAGGGATTTTGGAACTATGGCAAGTCAGAGCCTTTACTTCCTTCAGGTTCAAGGAGAATCGGGGCGATTGACACGATCAAAGGTCAGTTTCGATTTATCTATGTCTTTAGTGGTTGTTTGTATCTTTGTCTTTAGTATAGATACACACACATACACATTATTTTGAATAAAGATCTTATTTTCTATGGTTAGTGTTGACTTTGATGGAGTTGTTTTAAGTTACAATATGCAAAATTCATTTTTACATTTTCATCCTCTGTCATTTTTATTCCTTAAAATCAAGTTATCTCTGTTTTTTATCCCTTAAAATCAAGTTTTGTTACATGTTTTCATTATTTCTACCGTAATTATTACATTTCAATATTATTTCGTTGTTTGGGTCACATAATTCAAACACTGTTTATGTTAGTACAACTTCACATTTTTTTTTTTTTGGGAGAATTGACTTGACGGTCTCTTCTTAAGACAACCTTTCCTTGAATTTCTACTAAATAATACCATGTGAGGTGGCAAAACTCGTTACCGTGAAAGTTTGAGTTCTGAGTTTTTGGGGAGAGGGGTTGTGAGAGGTTACTGGAGAGAAGTTAATTTTATTTATTTTATTTGGGCAACGGACTAGAATAAGTTCTTTGAGAAGTTTGTCTCTAACTTCTTCATTAGTAGACGAGGAGATTTCTTTGGTAGAGCGGGTTTCTATCTATTTTGTGAAATAATTGATTGGGAATAGTGTTTTTTTTAGTTCAACCATATATGAGATAGGAATTCGATAATATTTTTTTAAAAAAAATACTCCGTTCCTGTTTTAGGTAGTAAATCTAAGTTCAATCGTCCAAATCCTTGGCTTATAGGAAGTAGGACAGAGTTCTAGCTCGTTACTATGAATGGAGCTAGATGATAAAAAATGACACATTATCTTACCTCCGAAGTTTTACCAAACGCACTTAGGGACCAAATTATATAATTAGCAAAAAGAAAAAAGAAAAGTTTTTGTGTATTTTGAAAAAGCCTTTCATGAAAAAGAAAAGGCATTAAAAAAAAGAGGACCCTTTTGAAGAGGGAAACCAGCAAAGCTTGCTCCTTTCAATAACTACATTAATCATTATAGTACATAGTTTAGAACTTAGAATAATTCATTATATATTAAAGTAAATTATTGTATGAACTTTATTATTTACCTTTTATTTTTTTTAAGATAAGGTGTCGAACTTTAATTTAGTCACATGCATGCGTCAAACAATCTTTAATTTAAAGAATATATAGTTTATGAAAGTTACAATCATATGATGAATTTTGTGCAAAGTGTTTGTTGATTAGGGTTACTTGGTTTTCTGATTCACCGAGCTAAATAAGTTGAATGAATATTCGATGTGGGACCCCCACCAAATCCATCCCTGACCCAGATCTACCGCTAGTAGATATTGTCGGGAAACTCCCTGTTCTCCTCCCCAACCAATGTGAGAGGTCAATTGGATGTGGGACCCCCACCAAATCCACCCCCTTTGGGGCCATCGAGAAGGCTGGAACATCGTCCGGTGCTAGCAGATATTGTCCTCTTTGGGCTTTCCTTTTCGGGCTTCCCCTCAAGGCTTTAAAACTCGTCTGCTAAGGGAAGGTTTCCACTCCCTTGTAAAAGGGTGTTTTGTTCTACTTCCCAACCAATGTGGGACATCACAAAGTTGATACTACATATCTTTTCTTTTTTATATTTTTTTTATACATTACACGTTGATCTCTATGAATTAG

mRNA sequence

CGAACTGAAATTGACAACGGATAAGAGATCGTCTCCATCTTCTCCAAAGAGAGAAGAAAAATGCAATCACTGCCATAATTTTCTTCAATTCCTTCATCAATGGCCACCAAGATTCTTCCTCAGGCCGTGATTTCTATTCCAAGAATCCCCAATCAATGTACGCCGAGAAGATTAGGGTTTTGTTCCGCAATTTCTTGTACTCGGCTTTCGTTTTCTACTCTTTCCTCGAGTTCAATCGGCTGCCATTTTCACCATACTGTTTCGGCGCCGATGAAACGGGCGTTTGTTGTGAGAGCTGAGGCGGATTCCGAAGCAGAGTCGGCGAGCGATGAGAAAAATGTGGAAAGAAGCGTTGGAGAAGCTCCTCAAGCTGTAGTAGAAGCAGTAGCGGTGTCTGATGGCCAGCCTGAGGCGGAGAAGCCGCCGAGAAAGCCTCGAGTTAAGCTTGGAGATGTATTGGGGATACTTAATAAGCGAGCAATTGAAGCGTCGGAGAAGGCGAGGCCGATTCCAGACATTAGAACTGGTGACATTGTGGAAATTAAACTGGAAGTTCCAGAAAATAGGCGTAGGCTTTCTGTTTATAGAGGAATTGTCATGTCAAAACAAAATGCTGGCATCCACACTACGATTAGAATTCGCAGAATTATTGCTGGTGTGGGCGTGGAGATTGTTTTTCCGCTGTACTCACCAAACATCAAAGAGCTAAAAGTGGTGAGCCACAGGAAGGTGAGGAGGGCAAGATTGTATTACTTGAGAGACAAACTTCCAAGACTCTCTACTTTCAAGTGAAACACCCCAATGGATTGACCATCAACGTTATGTTTCTTGTTATCATTCAATATTTGCACATTATTCTTCTGTATAGCGTCATTAATTATATATATGAGCAGCAGGGGTTTCATGAAAGTTCATGAAGTTGGGCATCTCGAGATCTTTCGGCTGTGAACAAATTAGCCATGGTTCTGTCCCTAATCTTTGAAGACTGGAAGGGATTTTGGAACTATGGCAAGTCAGAGCCTTTACTTCCTTCAGGTTCAAGGAGAATCGGGGCGATTGACACGATCAAAGGTCAGTTTCGATTTATCTATGTCTTTAGTGGTTGTTTGTATCTTTGTCTTTAGTATAGATACACACACATACACATTATTTTGAATAAAGATCTTATTTTCTATGGTTAGTGTTGACTTTGATGGAGTTGTTTTAAGTTACAATATGCAAAATTCATTTTTACATTTTCATCCTCTGTCATTTTTATTCCTTAAAATCAAGTTATCTCTGTTTTTTATCCCTTAAAATCAAGTTTTGTTACATGTTTTCATTATTTCTACCGTAATTATTACATTTCAATATTATTTCGTTGTTTGGGTCACATAATTCAAACACTGTTTATGTTAGTACAACTTCACATTTTTTTTTTTTTGGGAGAATTGACTTGACGGTCTCTTCTTAAGACAACCTTTCCTTGAATTTCTACTAAATAATACCATGTGAGGTGGCAAAACTCGTTACCGTGAAAGTTTGAGTTCTGAGTTTTTGGGGAGAGGGGTTGTGAGAGGTTACTGGAGAGAAGTTAATTTTATTTATTTTATTTGGGCAACGGACTAGAATAAGTTCTTTGAGAAGTTTGTCTCTAACTTCTTCATTAGTAGACGAGGAGATTTCTTTGGTAGAGCGGGTTTCTATCTATTTTGTGAAATAATTGATTGGGAATAGTGTTTTTTTTAGTTCAACCATATATGAGATAGGAATTCGATAATATTTTTTTAAAAAAAATACTCCGTTCCTGTTTTAGGTAGTAAATCTAAGTTCAATCGTCCAAATCCTTGGCTTATAGGAAGTAGGACAGAGTTCTAGCTCGTTACTATGAATGGAGCTAGATGATAAAAAATGACACATTATCTTACCTCCGAAGTTTTACCAAACGCACTTAGGGACCAAATTATATAATTAGCAAAAAGAAAAAAGAAAAGTTTTTGTGTATTTTGAAAAAGCCTTTCATGAAAAAGAAAAGGCATTAAAAAAAAGAGGACCCTTTTGAAGAGGGAAACCAGCAAAGCTTGCTCCTTTCAATAACTACATTAATCATTATAGTACATAGTTTAGAACTTAGAATAATTCATTATATATTAAAGTAAATTATTGTATGAACTTTATTATTTACCTTTTATTTTTTTTAAGATAAGGTGTCGAACTTTAATTTAGTCACATGCATGCGTCAAACAATCTTTAATTTAAAGAATATATAGTTTATGAAAGTTACAATCATATGATGAATTTTGTGCAAAGTGTTTGTTGATTAGGGTTACTTGGTTTTCTGATTCACCGAGCTAAATAAGTTGAATGAATATTCGATGTGGGACCCCCACCAAATCCATCCCTGACCCAGATCTACCGCTAGTAGATATTGTCGGGAAACTCCCTGTTCTCCTCCCCAACCAATGTGAGAGGTCAATTGGATGTGGGACCCCCACCAAATCCACCCCCTTTGGGGCCATCGAGAAGGCTGGAACATCGTCCGGTGCTAGCAGATATTGTCCTCTTTGGGCTTTCCTTTTCGGGCTTCCCCTCAAGGCTTTAAAACTCGTCTGCTAAGGGAAGGTTTCCACTCCCTTGTAAAAGGGTGTTTTGTTCTACTTCCCAACCAATGTGGGACATCACAAAGTTGATACTACATATCTTTTCTTTTTTATATTTTTTTTATACATTACACGTTGATCTCTATGAATTAG

Coding sequence (CDS)

ATGGCCACCAAGATTCTTCCTCAGGCCGTGATTTCTATTCCAAGAATCCCCAATCAATGTACGCCGAGAAGATTAGGGTTTTGTTCCGCAATTTCTTGTACTCGGCTTTCGTTTTCTACTCTTTCCTCGAGTTCAATCGGCTGCCATTTTCACCATACTGTTTCGGCGCCGATGAAACGGGCGTTTGTTGTGAGAGCTGAGGCGGATTCCGAAGCAGAGTCGGCGAGCGATGAGAAAAATGTGGAAAGAAGCGTTGGAGAAGCTCCTCAAGCTGTAGTAGAAGCAGTAGCGGTGTCTGATGGCCAGCCTGAGGCGGAGAAGCCGCCGAGAAAGCCTCGAGTTAAGCTTGGAGATGTATTGGGGATACTTAATAAGCGAGCAATTGAAGCGTCGGAGAAGGCGAGGCCGATTCCAGACATTAGAACTGGTGACATTGTGGAAATTAAACTGGAAGTTCCAGAAAATAGGCGTAGGCTTTCTGTTTATAGAGGAATTGTCATGTCAAAACAAAATGCTGGCATCCACACTACGATTAGAATTCGCAGAATTATTGCTGGTGTGGGCGTGGAGATTGTTTTTCCGCTGTACTCACCAAACATCAAAGAGCTAAAAGTGGTGAGCCACAGGAAGGTGAGGAGGGCAAGATTGTATTACTTGAGAGACAAACTTCCAAGACTCTCTACTTTCAAGTGA

Protein sequence

MATKILPQAVISIPRIPNQCTPRRLGFCSAISCTRLSFSTLSSSSIGCHFHHTVSAPMKRAFVVRAEADSEAESASDEKNVERSVGEAPQAVVEAVAVSDGQPEAEKPPRKPRVKLGDVLGILNKRAIEASEKARPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK

Homology

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BLAST of Cp4.1LG14g09130 vs. ExPASy Swiss-Prot
Match: Q8W463 (50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g17560 PE=2 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.2e-65
Identity = 143/231 (61.90%), Postives = 174/231 (75.32%), Query Frame = 0


Query: 6   LPQAVISIPRIPNQCTPRRLGFCSAISC-----TRLSFSTLSSSSIGCHFHHTVSAPMKR 65
           LPQA+  IPR P Q + + LGF S +SC     +R+S S LS +  G  F  ++   ++ 
Sbjct: 8   LPQALHMIPRNPTQ-SSKNLGFSSFLSCAPSMDSRISVSRLSLNHPGSKFGFSLDTRVRN 67

Query: 66  AFVVRA-EADSEAESASDEKNVERSVGEAPQAVVEAVAVSDGQPEAEKPPRKPRVKLGDV 125
            F+VRA E ++EAES      +  + G   + VVEA           KP RKPR+KLGDV
Sbjct: 68  EFIVRAEEGNTEAESEEFVAEIADTEGNV-EEVVEA-----------KPTRKPRIKLGDV 127

Query: 126 LGILNKRAIEASEKARPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIR 185
           +GILN++AIE +EK RP+P+IRTGDIVEIKLEVPEN+RRLS+Y+GIVMS+QNAGIHTTIR
Sbjct: 128 MGILNQKAIEVAEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIR 187

Query: 186 IRRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 231
           IRRIIAG+GVEIVFP+YSPNIKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 188 IRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 225

[Close]

BLAST of Cp4.1LG14g09130 vs. ExPASy Swiss-Prot
Match: P82413 (50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL19 PE=1 SV=2)

HSP 1 Score: 240.4 bits (612), Expect = 2.1e-62
Identity = 142/243 (58.44%), Postives = 177/243 (72.84%), Query Frame = 0


Query: 1   MATKILPQAVISIPRIPN-QCTP--RRLGF---------CSAISCTRLSFSTLSSSSIGC 60
           MA+K+LPQA++ IP   + QC P  ++LGF          S+   + L  S  SS+    
Sbjct: 1   MASKVLPQALLVIPSNHSLQCPPLKKQLGFPIDSNRRFSLSSNCRSNLMVSRASSNLFSS 60

Query: 61  HFHHTVSAPMKRAFVVRAEADSEAESASDEKNVERSVGEAPQAVVEAVAVSDGQPEA-EK 120
           +F    S P + +FVVR    SEAE +SD      +  E+   V E     + + EA E+
Sbjct: 61  NFSSIFSFPARNSFVVR----SEAEDSSD------APAESVAVVAEEELPVESEAEAEER 120

Query: 121 PPRKPRVKLGDVLGILNKRAIEASEKARPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVM 180
           PPR+ RVKLGD++GILNK+A+ A+E+ RP+P IRTGDIV+I+LEVPEN+RRLSVY+GIV+
Sbjct: 121 PPRQQRVKLGDIMGILNKKAVHAAEELRPVPGIRTGDIVQIRLEVPENKRRLSVYKGIVI 180

Query: 181 SKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLS 231
           S+QNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIKE+KVVSHRKVR+ARLYYLRDKLPRLS
Sbjct: 181 SRQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIKEIKVVSHRKVRKARLYYLRDKLPRLS 233

[Close]

BLAST of Cp4.1LG14g09130 vs. ExPASy Swiss-Prot
Match: Q8RXX5 (50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g47190 PE=2 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.5e-60
Identity = 132/234 (56.41%), Postives = 169/234 (72.22%), Query Frame = 0


Query: 2   ATKILPQAVISIPRIPNQCTPRRLGFCSAIS-----CTRLSFSTLSSSSIGCHFHHTVSA 61
           ++ +LPQA+  IPR P+  + + LG  S +       +RLS S +  +    +F   + +
Sbjct: 4   SSHLLPQALHMIPRTPS-FSSKNLGVSSILPRASSVNSRLSVSRVFLNHSSSNFGFAIDS 63

Query: 62  PMKRAFVVRAEADSEAESASDEKNVERSVGEAPQAVVEAVAVSDGQPEAEKPPRKPRVKL 121
             ++ F+ +AE  +E E+   E  VE +V    +   EA   +    E  KPP K RVKL
Sbjct: 64  KKRKEFIAKAEESTEGET---EAVVENAVETEAEGEGEATVAA----EEAKPPWKTRVKL 123

Query: 122 GDVLGILNKRAIEASEKARPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHT 181
           GD++G+LNK+AIE +E  RP+P +RTGDIVEIKLEVPEN+RRLS+Y+GIVMS+QNAGIHT
Sbjct: 124 GDIMGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHT 183

Query: 182 TIRIRRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 231
           TIRIRRIIAG+GVEIVFP+YSPNIKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 184 TIRIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 229

[Close]

BLAST of Cp4.1LG14g09130 vs. ExPASy Swiss-Prot
Match: B8HT34 (50S ribosomal protein L19 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=rplS PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.2e-19
Identity = 47/106 (44.34%), Postives = 74/106 (69.81%), Query Frame = 0


Query: 126 RAIEASEKARPIPDIRTGDIVEIKLEVPE-NRRRLSVYRGIVMSKQNAGIHTTIRIRRII 185
           R++EA +    +P+I  GD V++ + + E N+ R   Y GIV++K+N+GI+ TI +RRI 
Sbjct: 8   RSLEAEQLKSNLPEIHVGDTVKVGVIIQEGNKERTQPYEGIVIAKRNSGINATITVRRIF 67

Query: 186 AGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 231
            GVGVE VF L+SP ++ +K++   KVRRA+LYYLRD++ + +  K
Sbjct: 68  QGVGVERVFLLHSPRVESIKIIKRGKVRRAKLYYLRDRVGKATRVK 113

[Close]

BLAST of Cp4.1LG14g09130 vs. ExPASy Swiss-Prot
Match: B2JA71 (50S ribosomal protein L19 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=rplS PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.3e-19
Identity = 47/106 (44.34%), Postives = 73/106 (68.87%), Query Frame = 0


Query: 126 RAIEASEKARPIPDIRTGDIVEIKLEVPENRR-RLSVYRGIVMSKQNAGIHTTIRIRRII 185
           R+IEA +    +PDI  GD V++ +++ E  + R+  Y G+V++K+N GI+ TI +R++ 
Sbjct: 8   RSIEAEQLKSNLPDIYVGDTVKVGVKIKEGEKYRVQPYEGVVIAKRNGGINETITVRKVF 67

Query: 186 AGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 231
            GVGVE VF L+SP I  +KV+   KVRRA+LYYLRD++ + +  K
Sbjct: 68  QGVGVERVFLLHSPRIDSIKVLRRGKVRRAKLYYLRDRVGKATRIK 113

[Close]

BLAST of Cp4.1LG14g09130 vs. NCBI nr
Match: XP_023551811.1 (50S ribosomal protein L19-1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 438 bits (1126), Expect = 1.47e-154
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MATKILPQAVISIPRIPNQCTPRRLGFCSAISCTRLSFSTLSSSSIGCHFHHTVSAPMKR 60
           MATKILPQAVISIPRIPNQCTPRRLGFCSAISCTRLSFSTLSSSSIGCHFHHTVSAPMKR
Sbjct: 1   MATKILPQAVISIPRIPNQCTPRRLGFCSAISCTRLSFSTLSSSSIGCHFHHTVSAPMKR 60

Query: 61  AFVVRAEADSEAESASDEKNVERSVGEAPQAVVEAVAVSDGQPEAEKPPRKPRVKLGDVL 120
           AFVVRAEADSEAESASDEKNVERSVGEAPQAVVEAVAVSDGQPEAEKPPRKPRVKLGDVL
Sbjct: 61  AFVVRAEADSEAESASDEKNVERSVGEAPQAVVEAVAVSDGQPEAEKPPRKPRVKLGDVL 120

Query: 121 GILNKRAIEASEKARPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRI 180
           GILNKRAIEASEKARPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRI
Sbjct: 121 GILNKRAIEASEKARPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRI 180

Query: 181 RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 230
           RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 230

[Close]

BLAST of Cp4.1LG14g09130 vs. NCBI nr
Match: XP_022965172.1 (50S ribosomal protein L19-1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 416 bits (1069), Expect = 7.20e-146
Identity = 215/230 (93.48%), Postives = 224/230 (97.39%), Query Frame = 0


Query: 1   MATKILPQAVISIPRIPNQCTPRRLGFCSAISCTRLSFSTLSSSSIGCHFHHTVSAPMKR 60
           MATKILPQAVIS+PR PNQC PRRLGFCSAIS TRLSFSTLSSSSIGCHFHHTVSAPMKR
Sbjct: 1   MATKILPQAVISVPRTPNQCAPRRLGFCSAISATRLSFSTLSSSSIGCHFHHTVSAPMKR 60

Query: 61  AFVVRAEADSEAESASDEKNVERSVGEAPQAVVEAVAVSDGQPEAEKPPRKPRVKLGDVL 120
           AFVVRAEADSEAESASDE+NV+++VGEAPQ VVEAVA SDGQPEAEKPPRKPRVKLGDVL
Sbjct: 61  AFVVRAEADSEAESASDEENVDKTVGEAPQGVVEAVAESDGQPEAEKPPRKPRVKLGDVL 120

Query: 121 GILNKRAIEASEKARPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRI 180
           GILNKRA+EASEKARPIPDIRTGDIVE+KLEVPENRRRLSVYRGIVMSKQNAGIHTTIRI
Sbjct: 121 GILNKRAVEASEKARPIPDIRTGDIVEVKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRI 180

Query: 181 RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 230
           R+IIAGVGVEIVFPLYSPNIK +KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 RKIIAGVGVEIVFPLYSPNIKGIKVVSHRKVRRARLYYLRDKLPRLSTFK 230

[Close]

BLAST of Cp4.1LG14g09130 vs. NCBI nr
Match: XP_022938903.1 (50S ribosomal protein L19-1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 361 bits (927), Expect = 2.18e-124
Identity = 191/230 (83.04%), Postives = 202/230 (87.83%), Query Frame = 0


Query: 1   MATKILPQAVISIPRIPNQCTPRRLGFCSAISCTRLSFSTLSSSSIGCHFHHTVSAPMKR 60
           MA+KILPQAV SIPR PNQC PR+LGFCSAI   RLSFSTLSSSSIGCHFHH V+ P+KR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60

Query: 61  AFVVRAEADSEAESASDEKNVERSVGEAPQAVVEAVAVSDGQPEAEKPPRKPRVKLGDVL 120
            FVVRAEA+SEAE+A           EAP+A VE V  SD QPE  KPPRKPRVKLGDV+
Sbjct: 61  TFVVRAEANSEAEAAE----------EAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVM 120

Query: 121 GILNKRAIEASEKARPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRI 180
           GILNKRA+EASEK RPIPD+RTGDIVEIKLEVPENRRRLSVYRGIV+SKQNAGIHTTIRI
Sbjct: 121 GILNKRAVEASEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRI 180

Query: 181 RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 230
           RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220

[Close]

BLAST of Cp4.1LG14g09130 vs. NCBI nr
Match: XP_023541012.1 (50S ribosomal protein L19-1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360 bits (924), Expect = 6.26e-124
Identity = 191/230 (83.04%), Postives = 201/230 (87.39%), Query Frame = 0


Query: 1   MATKILPQAVISIPRIPNQCTPRRLGFCSAISCTRLSFSTLSSSSIGCHFHHTVSAPMKR 60
           MA+KILPQAV SIPR PNQC PR+LGFCSAI   RLSFSTLSSSSIGCHFHH V+ P+KR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60

Query: 61  AFVVRAEADSEAESASDEKNVERSVGEAPQAVVEAVAVSDGQPEAEKPPRKPRVKLGDVL 120
            FVVRAEA+SEAE+A           EAP+  VE V  SD QPE  KPPRKPRVKLGDV+
Sbjct: 61  TFVVRAEANSEAEAAE----------EAPEVEVEGVVESDAQPEEVKPPRKPRVKLGDVM 120

Query: 121 GILNKRAIEASEKARPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRI 180
           GILNKRA+EASEK RPIPDIRTGDIVEIKLEVPENRRRLSVYRGIV+SKQNAGIHTTIRI
Sbjct: 121 GILNKRAVEASEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRI 180

Query: 181 RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 230
           RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220

[Close]

BLAST of Cp4.1LG14g09130 vs. NCBI nr
Match: KAG7030158.1 (50S ribosomal protein L19, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 360 bits (923), Expect = 8.88e-124
Identity = 190/230 (82.61%), Postives = 201/230 (87.39%), Query Frame = 0


Query: 1   MATKILPQAVISIPRIPNQCTPRRLGFCSAISCTRLSFSTLSSSSIGCHFHHTVSAPMKR 60
           MA+KILPQAV SIPR PNQC PR+LGFCSAI   RLSFSTLSSSSIGCHFHH V+ P+KR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAVPVKR 60

Query: 61  AFVVRAEADSEAESASDEKNVERSVGEAPQAVVEAVAVSDGQPEAEKPPRKPRVKLGDVL 120
            FVVRAEA+SE E+A           EAP+A VE V  SD QPE  KPPRKPRVKLGDV+
Sbjct: 61  TFVVRAEANSETEAAE----------EAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVM 120

Query: 121 GILNKRAIEASEKARPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRI 180
           GILNKRA+EASEK RPIPD+RTGDIVEIKLEVPENRRRLSVYRGIV+SKQNAGIHTTIRI
Sbjct: 121 GILNKRAVEASEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRI 180

Query: 181 RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 230
           RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220

[Close]

BLAST of Cp4.1LG14g09130 vs. ExPASy TrEMBL
Match: A0A6J1HJM2 (50S ribosomal protein L19-1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111465106 PE=3 SV=1)

HSP 1 Score: 416 bits (1069), Expect = 3.48e-146
Identity = 215/230 (93.48%), Postives = 224/230 (97.39%), Query Frame = 0


Query: 1   MATKILPQAVISIPRIPNQCTPRRLGFCSAISCTRLSFSTLSSSSIGCHFHHTVSAPMKR 60
           MATKILPQAVIS+PR PNQC PRRLGFCSAIS TRLSFSTLSSSSIGCHFHHTVSAPMKR
Sbjct: 1   MATKILPQAVISVPRTPNQCAPRRLGFCSAISATRLSFSTLSSSSIGCHFHHTVSAPMKR 60

Query: 61  AFVVRAEADSEAESASDEKNVERSVGEAPQAVVEAVAVSDGQPEAEKPPRKPRVKLGDVL 120
           AFVVRAEADSEAESASDE+NV+++VGEAPQ VVEAVA SDGQPEAEKPPRKPRVKLGDVL
Sbjct: 61  AFVVRAEADSEAESASDEENVDKTVGEAPQGVVEAVAESDGQPEAEKPPRKPRVKLGDVL 120

Query: 121 GILNKRAIEASEKARPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRI 180
           GILNKRA+EASEKARPIPDIRTGDIVE+KLEVPENRRRLSVYRGIVMSKQNAGIHTTIRI
Sbjct: 121 GILNKRAVEASEKARPIPDIRTGDIVEVKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRI 180

Query: 181 RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 230
           R+IIAGVGVEIVFPLYSPNIK +KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 RKIIAGVGVEIVFPLYSPNIKGIKVVSHRKVRRARLYYLRDKLPRLSTFK 230

[Close]

BLAST of Cp4.1LG14g09130 vs. ExPASy TrEMBL
Match: A0A6J1FK79 (50S ribosomal protein L19-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111444973 PE=3 SV=1)

HSP 1 Score: 361 bits (927), Expect = 1.06e-124
Identity = 191/230 (83.04%), Postives = 202/230 (87.83%), Query Frame = 0


Query: 1   MATKILPQAVISIPRIPNQCTPRRLGFCSAISCTRLSFSTLSSSSIGCHFHHTVSAPMKR 60
           MA+KILPQAV SIPR PNQC PR+LGFCSAI   RLSFSTLSSSSIGCHFHH V+ P+KR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60

Query: 61  AFVVRAEADSEAESASDEKNVERSVGEAPQAVVEAVAVSDGQPEAEKPPRKPRVKLGDVL 120
            FVVRAEA+SEAE+A           EAP+A VE V  SD QPE  KPPRKPRVKLGDV+
Sbjct: 61  TFVVRAEANSEAEAAE----------EAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVM 120

Query: 121 GILNKRAIEASEKARPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRI 180
           GILNKRA+EASEK RPIPD+RTGDIVEIKLEVPENRRRLSVYRGIV+SKQNAGIHTTIRI
Sbjct: 121 GILNKRAVEASEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRI 180

Query: 181 RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 230
           RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220

[Close]

BLAST of Cp4.1LG14g09130 vs. ExPASy TrEMBL
Match: A0A1S3BJX1 (50S ribosomal protein L19, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490850 PE=3 SV=1)

HSP 1 Score: 359 bits (922), Expect = 6.33e-124
Identity = 192/230 (83.48%), Postives = 206/230 (89.57%), Query Frame = 0


Query: 1   MATKILPQAVISIPRIPNQCTPRRLGFCSAISCTRLSFSTLSSSSIGCHFHHTVSAPMKR 60
           MA+KILPQAVISIPR PNQC PRRLGFCSA+S TR+SFSTLSSSSIG HF HTVSAP+KR
Sbjct: 1   MASKILPQAVISIPRNPNQCPPRRLGFCSAVSGTRVSFSTLSSSSIGSHFRHTVSAPLKR 60

Query: 61  AFVVRAEADSEAESASDEKNVERSVGEAPQAVVEAVAVSDGQPEAEKPPRKPRVKLGDVL 120
           AFVVRAEA+ EAESA++E         AP+A VEA   SD QPE EKP RKPRVKLGDV+
Sbjct: 61  AFVVRAEANPEAESAAEE---------APEAEVEAAVESDAQPEEEKPSRKPRVKLGDVM 120

Query: 121 GILNKRAIEASEKARPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRI 180
           GILNKRAIEASEK RPIPDIRTGDIVE+KLEV ENRRRLSVYRGIV+SKQNAGIHTTIRI
Sbjct: 121 GILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRI 180

Query: 181 RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 230
           RRIIAGVGVEIVFPLYSPNI+E+KVVSHRKVRRARLYYLRDKLP+LSTFK
Sbjct: 181 RRIIAGVGVEIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKLSTFK 221

[Close]

BLAST of Cp4.1LG14g09130 vs. ExPASy TrEMBL
Match: A0A0A0L237 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017220 PE=3 SV=1)

HSP 1 Score: 358 bits (919), Expect = 1.81e-123
Identity = 189/230 (82.17%), Postives = 207/230 (90.00%), Query Frame = 0


Query: 1   MATKILPQAVISIPRIPNQCTPRRLGFCSAISCTRLSFSTLSSSSIGCHFHHTVSAPMKR 60
           MA+KILPQAVISIPR PNQC PRRLGFCSA+S TR+SFSTLSSSSIG HFHHTV+AP++R
Sbjct: 1   MASKILPQAVISIPRNPNQCAPRRLGFCSAVSGTRVSFSTLSSSSIGSHFHHTVAAPLRR 60

Query: 61  AFVVRAEADSEAESASDEKNVERSVGEAPQAVVEAVAVSDGQPEAEKPPRKPRVKLGDVL 120
           AFVVRAEA+ EA+SA++E         AP+A VEA   SD QPE EKP RKPRVKLGDV+
Sbjct: 61  AFVVRAEANPEADSAAEE---------APEAEVEAAVESDAQPEEEKPSRKPRVKLGDVM 120

Query: 121 GILNKRAIEASEKARPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRI 180
           GILNKRAIEASEK RPIPDIRTGDIVE+KLEV ENRRRLSVYRGIV+SKQNAGIHTTIRI
Sbjct: 121 GILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRI 180

Query: 181 RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 230
           RRIIAGVGVEIVFPLYSPNI+E++VVSHRKVRRARLYYLRDKLP+LSTFK
Sbjct: 181 RRIIAGVGVEIVFPLYSPNIREIRVVSHRKVRRARLYYLRDKLPKLSTFK 221

[Close]

BLAST of Cp4.1LG14g09130 vs. ExPASy TrEMBL
Match: A0A6J1L2G3 (50S ribosomal protein L19-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111498498 PE=3 SV=1)

HSP 1 Score: 355 bits (911), Expect = 2.89e-122
Identity = 189/230 (82.17%), Postives = 200/230 (86.96%), Query Frame = 0


Query: 1   MATKILPQAVISIPRIPNQCTPRRLGFCSAISCTRLSFSTLSSSSIGCHFHHTVSAPMKR 60
           MA+KILPQAV SIPR PNQC PR+LGF SAI   RLSFSTLSSSSIGCHFHH V+ P+KR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFRSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60

Query: 61  AFVVRAEADSEAESASDEKNVERSVGEAPQAVVEAVAVSDGQPEAEKPPRKPRVKLGDVL 120
            FVVRAE +SEAE+A           EAP+A VE V  SD QPE  KPPRKPRVKLGDV+
Sbjct: 61  TFVVRAEVNSEAEAAE----------EAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVM 120

Query: 121 GILNKRAIEASEKARPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRI 180
           GILNKRA+EASEK RPIPD+RTGDIVEIKLEVPENRRRLSVYRGIV+SKQNAGIHTTIRI
Sbjct: 121 GILNKRAVEASEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRI 180

Query: 181 RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 230
           RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 RRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220

[Close]

BLAST of Cp4.1LG14g09130 vs. TAIR 10
Match: AT4G17560.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 251.1 bits (640), Expect = 8.4e-67
Identity = 143/231 (61.90%), Postives = 174/231 (75.32%), Query Frame = 0


Query: 6   LPQAVISIPRIPNQCTPRRLGFCSAISC-----TRLSFSTLSSSSIGCHFHHTVSAPMKR 65
           LPQA+  IPR P Q + + LGF S +SC     +R+S S LS +  G  F  ++   ++ 
Sbjct: 8   LPQALHMIPRNPTQ-SSKNLGFSSFLSCAPSMDSRISVSRLSLNHPGSKFGFSLDTRVRN 67

Query: 66  AFVVRA-EADSEAESASDEKNVERSVGEAPQAVVEAVAVSDGQPEAEKPPRKPRVKLGDV 125
            F+VRA E ++EAES      +  + G   + VVEA           KP RKPR+KLGDV
Sbjct: 68  EFIVRAEEGNTEAESEEFVAEIADTEGNV-EEVVEA-----------KPTRKPRIKLGDV 127

Query: 126 LGILNKRAIEASEKARPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIR 185
           +GILN++AIE +EK RP+P+IRTGDIVEIKLEVPEN+RRLS+Y+GIVMS+QNAGIHTTIR
Sbjct: 128 MGILNQKAIEVAEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIR 187

Query: 186 IRRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 231
           IRRIIAG+GVEIVFP+YSPNIKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 188 IRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 225

[Close]

BLAST of Cp4.1LG14g09130 vs. TAIR 10
Match: AT5G47190.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 234.2 bits (596), Expect = 1.1e-61
Identity = 132/234 (56.41%), Postives = 169/234 (72.22%), Query Frame = 0


Query: 2   ATKILPQAVISIPRIPNQCTPRRLGFCSAIS-----CTRLSFSTLSSSSIGCHFHHTVSA 61
           ++ +LPQA+  IPR P+  + + LG  S +       +RLS S +  +    +F   + +
Sbjct: 4   SSHLLPQALHMIPRTPS-FSSKNLGVSSILPRASSVNSRLSVSRVFLNHSSSNFGFAIDS 63

Query: 62  PMKRAFVVRAEADSEAESASDEKNVERSVGEAPQAVVEAVAVSDGQPEAEKPPRKPRVKL 121
             ++ F+ +AE  +E E+   E  VE +V    +   EA   +    E  KPP K RVKL
Sbjct: 64  KKRKEFIAKAEESTEGET---EAVVENAVETEAEGEGEATVAA----EEAKPPWKTRVKL 123

Query: 122 GDVLGILNKRAIEASEKARPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHT 181
           GD++G+LNK+AIE +E  RP+P +RTGDIVEIKLEVPEN+RRLS+Y+GIVMS+QNAGIHT
Sbjct: 124 GDIMGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHT 183

Query: 182 TIRIRRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 231
           TIRIRRIIAG+GVEIVFP+YSPNIKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 184 TIRIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 229

[Close]

BLAST of Cp4.1LG14g09130 vs. TAIR 10
Match: AT4G11630.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 133.7 bits (335), Expect = 1.9e-31
Identity = 66/132 (50.00%), Postives = 102/132 (77.27%), Query Frame = 0


Query: 101 GQPEAE-KPPRKPRVKLGD-----VLGILNKRAIEASEKARPIPDIRTGDIVEIKLEVPE 160
           G PE++   P++ + K  D     ++ I++K A+E     R IP+I+ G IV++K+EVPE
Sbjct: 91  GSPESDCVVPQRIKFKRLDKTAKHIMQIVDKEAVEEVRSLREIPEIKPGYIVQLKVEVPE 150

Query: 161 NRRRLSVYRGIVMSKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRA 220
           N+RR+S+ +G+V++++NAG+++T RIRR++AGVGVE +FPLYSPN++E+KVV  +KVRRA
Sbjct: 151 NKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPLYSPNLREIKVVDKKKVRRA 210

Query: 221 RLYYLRDKLPRL 227
           +LYYLRDK+  L
Sbjct: 211 KLYYLRDKVNAL 222

[Close]

BLAST of Cp4.1LG14g09130 vs. TAIR 10
Match: AT5G11750.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 133.7 bits (335), Expect = 1.9e-31
Identity = 66/132 (50.00%), Postives = 102/132 (77.27%), Query Frame = 0


Query: 101 GQPEAE-KPPRKPRVKLGD-----VLGILNKRAIEASEKARPIPDIRTGDIVEIKLEVPE 160
           G PE++   P++ + K  D     ++ I++K A+E     R IP+I+ G IV++K+EVPE
Sbjct: 95  GSPESDCVVPQRIKFKRLDKTAKHIMQIVDKEAVEEVRNLREIPEIKPGYIVQLKVEVPE 154

Query: 161 NRRRLSVYRGIVMSKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRA 220
           N+RR+S+ +G+V++++NAG+++T RIRR++AGVGVE +FPLYSPN++E+KVV  +KVRRA
Sbjct: 155 NKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPLYSPNLREIKVVDKKKVRRA 214

Query: 221 RLYYLRDKLPRL 227
           +LYYLRDK+  L
Sbjct: 215 KLYYLRDKVNAL 226

[Close]

BLAST of Cp4.1LG14g09130 vs. TAIR 10
Match: AT1G24240.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 129.0 bits (323), Expect = 4.8e-30
Identity = 64/132 (48.48%), Postives = 101/132 (76.52%), Query Frame = 0


Query: 101 GQPEAE-KPPRKPRVKLGD-----VLGILNKRAIEASEKARPIPDIRTGDIVEIKLEVPE 160
           G PE++   P++ + K  D     ++ I++K A+E     R IP+I+ G IV++K+EVPE
Sbjct: 88  GSPESDCVVPQRIKFKRLDKTAKHIMQIVDKEAVEEVRTLREIPEIKPGYIVQLKVEVPE 147

Query: 161 NRRRLSVYRGIVMSKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRA 220
           N+RR+S+ +G+V++++NAG+++T RIRR++AGVGVE +FPLYSPN++ +KVV  +KVRRA
Sbjct: 148 NKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPLYSPNLRVIKVVDKKKVRRA 207

Query: 221 RLYYLRDKLPRL 227
           +LYYLR+K+  L
Sbjct: 208 KLYYLREKVNAL 219

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g09130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W463	1.2e-65	61.90	50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
P82413	2.1e-62	58.44	50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL19 P...	[more]
Q8RXX5	1.5e-60	56.41	50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
B8HT34	2.2e-19	44.34	50S ribosomal protein L19 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=39...	[more]
B2JA71	8.3e-19	44.34	50S ribosomal protein L19 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) ...	[more]

BLAST of Cp4.1LG14g09130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551811.1	1.47e-154	100.00	50S ribosomal protein L19-1, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022965172.1	7.20e-146	93.48	50S ribosomal protein L19-1, chloroplastic-like [Cucurbita maxima]	[more]
XP_022938903.1	2.18e-124	83.04	50S ribosomal protein L19-1, chloroplastic [Cucurbita moschata]	[more]
XP_023541012.1	6.26e-124	83.04	50S ribosomal protein L19-1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
KAG7030158.1	8.88e-124	82.61	50S ribosomal protein L19, chloroplastic [Cucurbita argyrosperma subsp. argyrosp...	[more]

BLAST of Cp4.1LG14g09130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJM2	3.48e-146	93.48	50S ribosomal protein L19-1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FK79	1.06e-124	83.04	50S ribosomal protein L19-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A1S3BJX1	6.33e-124	83.48	50S ribosomal protein L19, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490850...	[more]
A0A0A0L237	1.81e-123	82.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017220 PE=3 SV=1	[more]
A0A6J1L2G3	2.89e-122	82.17	50S ribosomal protein L19-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Cp4.1LG14g09130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17560.1	8.4e-67	61.90	Ribosomal protein L19 family protein	[more]
AT5G47190.1	1.1e-61	56.41	Ribosomal protein L19 family protein	[more]
AT4G11630.1	1.9e-31	50.00	Ribosomal protein L19 family protein	[more]
AT5G11750.1	1.9e-31	50.00	Ribosomal protein L19 family protein	[more]
AT1G24240.1	4.8e-30	48.48	Ribosomal protein L19 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001857	Ribosomal protein L19	PRINTS	PR00061	RIBOSOMALL19	coord: 183..206 score: 43.06 coord: 124..153 score: 22.5
IPR001857	Ribosomal protein L19	TIGRFAM	TIGR01024	TIGR01024	coord: 128..222 e-value: 3.3E-28 score: 96.1
IPR001857	Ribosomal protein L19	PFAM	PF01245	Ribosomal_L19	coord: 127..224 e-value: 8.6E-31 score: 106.2
IPR001857	Ribosomal protein L19	PANTHER	PTHR15680	RIBOSOMAL PROTEIN L19	coord: 1..230
IPR038657	Ribosomal protein L19 superfamily	GENE3D	2.30.30.790		coord: 114..229 e-value: 2.3E-30 score: 107.0
None	No IPR available	PANTHER	PTHR15680:SF10	50S RIBOSOMAL PROTEIN L19-1, CHLOROPLASTIC-RELATED	coord: 1..230
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 127..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g09130.1	Cp4.1LG14g09130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome