Cp4.1LG13g11400 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAACTCTCAGCTCAAGCTCTTTGGTTTCAACATCTCAGAAGACCACAAATCAGTTTCCAACTTTACAGAGCCGCCGCCGGCGGAGTTGCCGGAATCTCGATATCCCCATGCCCCGAAGTTCGAGTGCCAATATTGTTGCAGAGGATTTTCCAATTCGCAAGCTTTGGGTGGCCATCAAAACGCCCACAGAGAAGAAAGAAGGCTTTTGAAGAGGGCTCAAATAAAATCTTGTCATCTTAATTACTTCACGCCTCTGCACGTACAGAACTGGCTCTCGTCGTCCTTTGTGCCGCAGCCACCGAGTACTCCACTGCAGGCGGCGGGGCTTCACGCTATGTCACGGCCGCTGCTGTCGCAAGATGTTTGGCGGCAGGCTGGAGTTATTACTGGGGCGGTCGGAGGTGTAGGAGATGAAGCTGTTCCCGGTAGGGGTTTGGGCCTGGATTTACAACTTAGTCTTGGGCCTAGTAAGCCTTGA ATGGCGAACTCTCAGCTCAAGCTCTTTGGTTTCAACATCTCAGAAGACCACAAATCAGTTTCCAACTTTACAGAGCCGCCGCCGGCGGAGTTGCCGGAATCTCGATATCCCCATGCCCCGAAGTTCGAGTGCCAATATTGTTGCAGAGGATTTTCCAATTCGCAAGCTTTGGGTGGCCATCAAAACGCCCACAGAGAAGAAAGAAGGCTTTTGAAGAGGGCTCAAATAAAATCTTGTCATCTTAATTACTTCACGCCTCTGCACGTACAGAACTGGCTCTCGTCGTCCTTTGTGCCGCAGCCACCGAGTACTCCACTGCAGGCGGCGGGGCTTCACGCTATGTCACGGCCGCTGCTGTCGCAAGATGTTTGGCGGCAGGCTGGAGTTATTACTGGGGCGGTCGGAGGTGTAGGAGATGAAGCTGTTCCCGGTAGGGGTTTGGGCCTGGATTTACAACTTAGTCTTGGGCCTAGTAAGCCTTGA ATGGCGAACTCTCAGCTCAAGCTCTTTGGTTTCAACATCTCAGAAGACCACAAATCAGTTTCCAACTTTACAGAGCCGCCGCCGGCGGAGTTGCCGGAATCTCGATATCCCCATGCCCCGAAGTTCGAGTGCCAATATTGTTGCAGAGGATTTTCCAATTCGCAAGCTTTGGGTGGCCATCAAAACGCCCACAGAGAAGAAAGAAGGCTTTTGAAGAGGGCTCAAATAAAATCTTGTCATCTTAATTACTTCACGCCTCTGCACGTACAGAACTGGCTCTCGTCGTCCTTTGTGCCGCAGCCACCGAGTACTCCACTGCAGGCGGCGGGGCTTCACGCTATGTCACGGCCGCTGCTGTCGCAAGATGTTTGGCGGCAGGCTGGAGTTATTACTGGGGCGGTCGGAGGTGTAGGAGATGAAGCTGTTCCCGGTAGGGGTTTGGGCCTGGATTTACAACTTAGTCTTGGGCCTAGTAAGCCTTGA MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQPPSTPLQAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP Homology
BLAST of Cp4.1LG13g11400 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 4.6e-16 Identity = 54/126 (42.86%), Postives = 67/126 (53.17%), Query Frame = 0
BLAST of Cp4.1LG13g11400 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 5.8e-11 Identity = 39/85 (45.88%), Postives = 49/85 (57.65%), Query Frame = 0
BLAST of Cp4.1LG13g11400 vs. ExPASy Swiss-Prot
Match: Q39264 (Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 7.8e-08 Identity = 36/102 (35.29%), Postives = 57/102 (55.88%), Query Frame = 0
BLAST of Cp4.1LG13g11400 vs. ExPASy Swiss-Prot
Match: Q9FG05 (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07 Identity = 31/82 (37.80%), Postives = 45/82 (54.88%), Query Frame = 0
BLAST of Cp4.1LG13g11400 vs. ExPASy Swiss-Prot
Match: P93751 (Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 3.0e-07 Identity = 30/70 (42.86%), Postives = 39/70 (55.71%), Query Frame = 0
BLAST of Cp4.1LG13g11400 vs. NCBI nr
Match: XP_023550962.1 (zinc finger protein 6-like [Cucurbita pepo subsp. pepo] >KAG7015922.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 328 bits (841), Expect = 2.02e-113 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of Cp4.1LG13g11400 vs. NCBI nr
Match: KAG6578343.1 (Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 327 bits (837), Expect = 8.23e-113 Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of Cp4.1LG13g11400 vs. NCBI nr
Match: XP_022993371.1 (zinc finger protein 6-like [Cucurbita maxima]) HSP 1 Score: 319 bits (818), Expect = 6.50e-110 Identity = 156/160 (97.50%), Postives = 157/160 (98.12%), Query Frame = 0
BLAST of Cp4.1LG13g11400 vs. NCBI nr
Match: XP_022939247.1 (zinc finger protein 6-like [Cucurbita moschata]) HSP 1 Score: 318 bits (816), Expect = 1.31e-109 Identity = 155/160 (96.88%), Postives = 156/160 (97.50%), Query Frame = 0
BLAST of Cp4.1LG13g11400 vs. NCBI nr
Match: XP_038886238.1 (zinc finger protein 6-like [Benincasa hispida]) HSP 1 Score: 223 bits (568), Expect = 1.01e-71 Identity = 119/166 (71.69%), Postives = 132/166 (79.52%), Query Frame = 0
BLAST of Cp4.1LG13g11400 vs. ExPASy TrEMBL
Match: A0A6J1JW51 (zinc finger protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC111489415 PE=4 SV=1) HSP 1 Score: 319 bits (818), Expect = 3.15e-110 Identity = 156/160 (97.50%), Postives = 157/160 (98.12%), Query Frame = 0
BLAST of Cp4.1LG13g11400 vs. ExPASy TrEMBL
Match: A0A6J1FG99 (zinc finger protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC111445220 PE=4 SV=1) HSP 1 Score: 318 bits (816), Expect = 6.36e-110 Identity = 155/160 (96.88%), Postives = 156/160 (97.50%), Query Frame = 0
BLAST of Cp4.1LG13g11400 vs. ExPASy TrEMBL
Match: A0A0A0LQ31 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G404810 PE=4 SV=1) HSP 1 Score: 112 bits (281), Expect = 1.62e-28 Identity = 57/85 (67.06%), Postives = 66/85 (77.65%), Query Frame = 0
BLAST of Cp4.1LG13g11400 vs. ExPASy TrEMBL
Match: A0A067KMC9 (C2H2-type domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_13000 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 6.55e-23 Identity = 54/100 (54.00%), Postives = 69/100 (69.00%), Query Frame = 0
BLAST of Cp4.1LG13g11400 vs. ExPASy TrEMBL
Match: A0A6P5XKC3 (zinc finger protein 6-like OS=Durio zibethinus OX=66656 GN=LOC111283919 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 7.92e-23 Identity = 82/201 (40.80%), Postives = 104/201 (51.74%), Query Frame = 0
BLAST of Cp4.1LG13g11400 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 ) HSP 1 Score: 85.9 bits (211), Expect = 3.2e-17 Identity = 54/126 (42.86%), Postives = 67/126 (53.17%), Query Frame = 0
BLAST of Cp4.1LG13g11400 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 68.9 bits (167), Expect = 4.1e-12 Identity = 39/85 (45.88%), Postives = 49/85 (57.65%), Query Frame = 0
BLAST of Cp4.1LG13g11400 vs. TAIR 10
Match: AT1G10480.1 (zinc finger protein 5 ) HSP 1 Score: 58.5 bits (140), Expect = 5.5e-09 Identity = 36/102 (35.29%), Postives = 57/102 (55.88%), Query Frame = 0
BLAST of Cp4.1LG13g11400 vs. TAIR 10
Match: AT5G06650.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 57.8 bits (138), Expect = 9.5e-09 Identity = 31/82 (37.80%), Postives = 45/82 (54.88%), Query Frame = 0
BLAST of Cp4.1LG13g11400 vs. TAIR 10
Match: AT3G23140.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 57.4 bits (137), Expect = 1.2e-08 Identity = 42/116 (36.21%), Postives = 56/116 (48.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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