Cp4.1LG13g11400 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g11400
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	zinc finger protein 6-like
Location	Cp4.1LG13: 9086094 .. 9086576 (+)
RNA-Seq Expression	Cp4.1LG13g11400
Synteny	Cp4.1LG13g11400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAACTCTCAGCTCAAGCTCTTTGGTTTCAACATCTCAGAAGACCACAAATCAGTTTCCAACTTTACAGAGCCGCCGCCGGCGGAGTTGCCGGAATCTCGATATCCCCATGCCCCGAAGTTCGAGTGCCAATATTGTTGCAGAGGATTTTCCAATTCGCAAGCTTTGGGTGGCCATCAAAACGCCCACAGAGAAGAAAGAAGGCTTTTGAAGAGGGCTCAAATAAAATCTTGTCATCTTAATTACTTCACGCCTCTGCACGTACAGAACTGGCTCTCGTCGTCCTTTGTGCCGCAGCCACCGAGTACTCCACTGCAGGCGGCGGGGCTTCACGCTATGTCACGGCCGCTGCTGTCGCAAGATGTTTGGCGGCAGGCTGGAGTTATTACTGGGGCGGTCGGAGGTGTAGGAGATGAAGCTGTTCCCGGTAGGGGTTTGGGCCTGGATTTACAACTTAGTCTTGGGCCTAGTAAGCCTTGA

mRNA sequence

ATGGCGAACTCTCAGCTCAAGCTCTTTGGTTTCAACATCTCAGAAGACCACAAATCAGTTTCCAACTTTACAGAGCCGCCGCCGGCGGAGTTGCCGGAATCTCGATATCCCCATGCCCCGAAGTTCGAGTGCCAATATTGTTGCAGAGGATTTTCCAATTCGCAAGCTTTGGGTGGCCATCAAAACGCCCACAGAGAAGAAAGAAGGCTTTTGAAGAGGGCTCAAATAAAATCTTGTCATCTTAATTACTTCACGCCTCTGCACGTACAGAACTGGCTCTCGTCGTCCTTTGTGCCGCAGCCACCGAGTACTCCACTGCAGGCGGCGGGGCTTCACGCTATGTCACGGCCGCTGCTGTCGCAAGATGTTTGGCGGCAGGCTGGAGTTATTACTGGGGCGGTCGGAGGTGTAGGAGATGAAGCTGTTCCCGGTAGGGGTTTGGGCCTGGATTTACAACTTAGTCTTGGGCCTAGTAAGCCTTGA

Coding sequence (CDS)

ATGGCGAACTCTCAGCTCAAGCTCTTTGGTTTCAACATCTCAGAAGACCACAAATCAGTTTCCAACTTTACAGAGCCGCCGCCGGCGGAGTTGCCGGAATCTCGATATCCCCATGCCCCGAAGTTCGAGTGCCAATATTGTTGCAGAGGATTTTCCAATTCGCAAGCTTTGGGTGGCCATCAAAACGCCCACAGAGAAGAAAGAAGGCTTTTGAAGAGGGCTCAAATAAAATCTTGTCATCTTAATTACTTCACGCCTCTGCACGTACAGAACTGGCTCTCGTCGTCCTTTGTGCCGCAGCCACCGAGTACTCCACTGCAGGCGGCGGGGCTTCACGCTATGTCACGGCCGCTGCTGTCGCAAGATGTTTGGCGGCAGGCTGGAGTTATTACTGGGGCGGTCGGAGGTGTAGGAGATGAAGCTGTTCCCGGTAGGGGTTTGGGCCTGGATTTACAACTTAGTCTTGGGCCTAGTAAGCCTTGA

Protein sequence

MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQPPSTPLQAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP

Homology

[Close]

BLAST of Cp4.1LG13g11400 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.6e-16
Identity = 54/126 (42.86%), Postives = 67/126 (53.17%), Query Frame = 0


Query: 4   SQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNA 63
           S LKLFG N+ E     +  +EP P     S    + K+ECQYCCR F+NSQALGGHQNA
Sbjct: 6   SSLKLFGINLLETTSVQNQSSEPRPGSGSGS---ESRKYECQYCCREFANSQALGGHQNA 65

Query: 64  HREERRLLKRAQIKSC-----HLNYFTPLHVQNWLSSSFVPQPPSTPLQAAGLHAMSRPL 123
           H++ER+LLKRAQ+ +      H N+       N L S+F P P          H M  P 
Sbjct: 66  HKKERQLLKRAQMLATRGLPRHHNFHPH---TNPLLSAFAPLPHLLSQPHPPPHMMLSPS 125

Query: 124 LSQDVW 125
            S   W
Sbjct: 126 SSSSKW 125

[Close]

BLAST of Cp4.1LG13g11400 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.8e-11
Identity = 39/85 (45.88%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 41  KFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCH-------------------- 100
           K+ECQYCCR F NSQALGGHQNAH++ER+ LKRAQ+++                      
Sbjct: 72  KYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSASQFLRNPI 131

Query: 101 LNYFTPLHVQNWLSSSFVPQPPSTP 106
           ++ F P    + LSSS VPQP   P
Sbjct: 132 VSAFAP--PPHLLSSSAVPQPMGGP 154

[Close]

BLAST of Cp4.1LG13g11400 vs. ExPASy Swiss-Prot
Match: Q39264 (Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.8e-08
Identity = 36/102 (35.29%), Postives = 57/102 (55.88%), Query Frame = 0


Query: 2   ANSQLKLFGFNISEDHKSVSNFT-EPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH 61
           ++  +KLFGF +    ++    T E   +    +      + ECQYC + F+NSQALGGH
Sbjct: 19  SDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQALGGH 78

Query: 62  QNAHREERRLLKRAQIKS--CHLNYFTPLHVQNWLSSSFVPQ 101
           QNAH++ER   KR Q+++    + Y+   H Q  +++SF  Q
Sbjct: 79  QNAHKKERLKKKRLQLQARRASIGYYLTNH-QQPITTSFQRQ 119

[Close]

BLAST of Cp4.1LG13g11400 vs. ExPASy Swiss-Prot
Match: Q9FG05 (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07
Identity = 31/82 (37.80%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 6  LKLFGFNISEDH---KSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQN 65
          ++LFGF     H   +S  N+ E   +   +++     +F+C YC R F  SQALGGHQN
Sbjct: 19 IRLFGFEFGASHEESESKDNYNENNESIKDDNK---EKRFKCHYCFRNFPTSQALGGHQN 78

Query: 66 AHREERRLLKRAQIKSCHLNYF 85
          AH+ ER+  KR  + S    +F
Sbjct: 79 AHKRERQQTKRFNLHSNAAAFF 97

[Close]

BLAST of Cp4.1LG13g11400 vs. ExPASy Swiss-Prot
Match: P93751 (Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.0e-07
Identity = 30/70 (42.86%), Postives = 39/70 (55.71%), Query Frame = 0


Query: 41  KFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSC--HLNYFTPLHVQNWLSSSFV 100
           +FEC YC R F  SQALGGHQNAH+ ER+  KR  + S   H     P H+  +L++   
Sbjct: 94  RFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSMTSYLHHHQPHDPHHIYGFLNNHHH 153

Query: 101 PQPPSTPLQA 109
              PS   +A
Sbjct: 154 RHYPSWTTEA 163

[Close]

BLAST of Cp4.1LG13g11400 vs. NCBI nr
Match: XP_023550962.1 (zinc finger protein 6-like [Cucurbita pepo subsp. pepo] >KAG7015922.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 328 bits (841), Expect = 2.02e-113
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH 60
           MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH
Sbjct: 1   MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH 60

Query: 61  QNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQPPSTPLQAAGLHAMSRPLLS 120
           QNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQPPSTPLQAAGLHAMSRPLLS
Sbjct: 61  QNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQPPSTPLQAAGLHAMSRPLLS 120

Query: 121 QDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP 160
           QDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP
Sbjct: 121 QDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP 160

[Close]

BLAST of Cp4.1LG13g11400 vs. NCBI nr
Match: KAG6578343.1 (Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 327 bits (837), Expect = 8.23e-113
Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH 60
           MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH
Sbjct: 1   MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH 60

Query: 61  QNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQPPSTPLQAAGLHAMSRPLLS 120
           QNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVP+PPSTPLQAAGLHAMSRPLLS
Sbjct: 61  QNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPKPPSTPLQAAGLHAMSRPLLS 120

Query: 121 QDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP 160
           QDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP
Sbjct: 121 QDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP 160

[Close]

BLAST of Cp4.1LG13g11400 vs. NCBI nr
Match: XP_022993371.1 (zinc finger protein 6-like [Cucurbita maxima])

HSP 1 Score: 319 bits (818), Expect = 6.50e-110
Identity = 156/160 (97.50%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 1   MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH 60
           MANSQLKLFGFNISE H SVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH
Sbjct: 1   MANSQLKLFGFNISEHHNSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH 60

Query: 61  QNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQPPSTPLQAAGLHAMSRPLLS 120
           QNAHREERRLLKRAQIKSCHLNYFTPLHV+NWLSSSFVPQPPSTPLQAAGLHAMSRP LS
Sbjct: 61  QNAHREERRLLKRAQIKSCHLNYFTPLHVRNWLSSSFVPQPPSTPLQAAGLHAMSRPPLS 120

Query: 121 QDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP 160
           QDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP
Sbjct: 121 QDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP 160

[Close]

BLAST of Cp4.1LG13g11400 vs. NCBI nr
Match: XP_022939247.1 (zinc finger protein 6-like [Cucurbita moschata])

HSP 1 Score: 318 bits (816), Expect = 1.31e-109
Identity = 155/160 (96.88%), Postives = 156/160 (97.50%), Query Frame = 0


Query: 1   MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH 60
           MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH
Sbjct: 1   MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH 60

Query: 61  QNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQPPSTPLQAAGLHAMSRPLLS 120
           QNAHREERRLLKRAQIKSCHLNYFTPLH+ NWLSSSF PQPPS P QAAGLHAMSRPLLS
Sbjct: 61  QNAHREERRLLKRAQIKSCHLNYFTPLHLHNWLSSSFAPQPPSIPPQAAGLHAMSRPLLS 120

Query: 121 QDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP 160
           QDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP
Sbjct: 121 QDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP 160

[Close]

BLAST of Cp4.1LG13g11400 vs. NCBI nr
Match: XP_038886238.1 (zinc finger protein 6-like [Benincasa hispida])

HSP 1 Score: 223 bits (568), Expect = 1.01e-71
Identity = 119/166 (71.69%), Postives = 132/166 (79.52%), Query Frame = 0


Query: 1   MANSQLKLFGFNISEDHKSVSNFTEPPPA-ELPESRYPHAPKFECQYCCRGFSNSQALGG 60
           M  S+LKLFGFNIS++ K+VSN T+PPPA E PES  PHAPKFECQYCCR FSNSQALGG
Sbjct: 1   MPKSRLKLFGFNISKEKKTVSNVTKPPPAMEWPESENPHAPKFECQYCCREFSNSQALGG 60

Query: 61  HQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQP-PST----PLQAAGLHAM 120
           HQNAHREER+LLK AQ+KSCH NY T LHVQNWLSSSF P P P+     P  A  ++AM
Sbjct: 61  HQNAHREERQLLKSAQMKSCHRNYITALHVQNWLSSSFPPPPLPAVVGGPPSTAEMIYAM 120

Query: 121 SRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP 160
           SRPLLSQ+V RQAG +TG +G VGDE V G  LGLDLQLSLGP KP
Sbjct: 121 SRPLLSQEVRRQAGDLTGVIGVVGDEDVSGWSLGLDLQLSLGPGKP 166

[Close]

BLAST of Cp4.1LG13g11400 vs. ExPASy TrEMBL
Match: A0A6J1JW51 (zinc finger protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC111489415 PE=4 SV=1)

HSP 1 Score: 319 bits (818), Expect = 3.15e-110
Identity = 156/160 (97.50%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 1   MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH 60
           MANSQLKLFGFNISE H SVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH
Sbjct: 1   MANSQLKLFGFNISEHHNSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH 60

Query: 61  QNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQPPSTPLQAAGLHAMSRPLLS 120
           QNAHREERRLLKRAQIKSCHLNYFTPLHV+NWLSSSFVPQPPSTPLQAAGLHAMSRP LS
Sbjct: 61  QNAHREERRLLKRAQIKSCHLNYFTPLHVRNWLSSSFVPQPPSTPLQAAGLHAMSRPPLS 120

Query: 121 QDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP 160
           QDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP
Sbjct: 121 QDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP 160

[Close]

BLAST of Cp4.1LG13g11400 vs. ExPASy TrEMBL
Match: A0A6J1FG99 (zinc finger protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC111445220 PE=4 SV=1)

HSP 1 Score: 318 bits (816), Expect = 6.36e-110
Identity = 155/160 (96.88%), Postives = 156/160 (97.50%), Query Frame = 0


Query: 1   MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH 60
           MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH
Sbjct: 1   MANSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH 60

Query: 61  QNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQPPSTPLQAAGLHAMSRPLLS 120
           QNAHREERRLLKRAQIKSCHLNYFTPLH+ NWLSSSF PQPPS P QAAGLHAMSRPLLS
Sbjct: 61  QNAHREERRLLKRAQIKSCHLNYFTPLHLHNWLSSSFAPQPPSIPPQAAGLHAMSRPLLS 120

Query: 121 QDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP 160
           QDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP
Sbjct: 121 QDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSKP 160

[Close]

BLAST of Cp4.1LG13g11400 vs. ExPASy TrEMBL
Match: A0A0A0LQ31 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G404810 PE=4 SV=1)

HSP 1 Score: 112 bits (281), Expect = 1.62e-28
Identity = 57/85 (67.06%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 1   MANSQLKLFGFNISEDHKSVSNFTEPP-PAELPESRYPHAPKFECQYCCRGFSNSQALGG 60
           ++NS LKLFGF+IS+++K VSNF EPP   E PES     PKFEC+YCCR FSNSQALGG
Sbjct: 34  VSNSHLKLFGFSISKENKRVSNFKEPPLTVESPESENSFPPKFECRYCCRQFSNSQALGG 93

Query: 61  HQNAHREERRLLKRAQIKSCHLNYF 84
           HQNAH+EER+LLK  QIK    NYF
Sbjct: 94  HQNAHKEERQLLKTPQIKYFRRNYF 118

[Close]

BLAST of Cp4.1LG13g11400 vs. ExPASy TrEMBL
Match: A0A067KMC9 (C2H2-type domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_13000 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.55e-23
Identity = 54/100 (54.00%), Postives = 69/100 (69.00%), Query Frame = 0


Query: 3   NSQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQN 62
           NS LKLFGFNI E++   +N +   P+  PES      K+ECQYCCR F+NSQALGGHQN
Sbjct: 17  NSTLKLFGFNILENNTDNNNISSKSPSGSPESDT-ETRKYECQYCCREFANSQALGGHQN 76

Query: 63  AHREERRLLKRAQIKSCHLNYFTPLHVQNWLSSSFVPQPP 102
           AH++ER+LLKRAQI++     F   +V N + S+F P PP
Sbjct: 77  AHKKERQLLKRAQIQAS--RNFAASYVPNSMFSNFSPLPP 113

[Close]

BLAST of Cp4.1LG13g11400 vs. ExPASy TrEMBL
Match: A0A6P5XKC3 (zinc finger protein 6-like OS=Durio zibethinus OX=66656 GN=LOC111283919 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 7.92e-23
Identity = 82/201 (40.80%), Postives = 104/201 (51.74%), Query Frame = 0


Query: 6   LKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNAHR 65
           LKLFGFNI E   + +N +   P+ LPE     A KFECQYCCR FSNSQALGGHQNAH+
Sbjct: 11  LKLFGFNIVE---TTANDSSKSPSGLPELET-DARKFECQYCCREFSNSQALGGHQNAHK 70

Query: 66  EERRLLKRAQIKSCHLNYFTPLHVQNWLSSSF-------VPQ--PPSTPLQAAG----LH 125
           +ER+LLKRAQ+++     F+  H+QN + S+F       VP+  P + PLQ       LH
Sbjct: 71  KERQLLKRAQMQAS--RSFSSPHLQNSMMSAFGLPPHLLVPKAVPEAAPLQYHSPFYMLH 130

Query: 126 --AMSRPL-----------------------------LSQDVWRQAGVITGAVGGVGDEA 160
             A + PL                             +S DV   A V+       GD+ 
Sbjct: 131 GGAAAAPLNMLHGGTYLYGPAAGLGRRLYTGEEGAAAMSGDVRDHARVLPAVRRFTGDDG 190

[Close]

BLAST of Cp4.1LG13g11400 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 )

HSP 1 Score: 85.9 bits (211), Expect = 3.2e-17
Identity = 54/126 (42.86%), Postives = 67/126 (53.17%), Query Frame = 0


Query: 4   SQLKLFGFNISEDHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQNA 63
           S LKLFG N+ E     +  +EP P     S    + K+ECQYCCR F+NSQALGGHQNA
Sbjct: 6   SSLKLFGINLLETTSVQNQSSEPRPGSGSGS---ESRKYECQYCCREFANSQALGGHQNA 65

Query: 64  HREERRLLKRAQIKSC-----HLNYFTPLHVQNWLSSSFVPQPPSTPLQAAGLHAMSRPL 123
           H++ER+LLKRAQ+ +      H N+       N L S+F P P          H M  P 
Sbjct: 66  HKKERQLLKRAQMLATRGLPRHHNFHPH---TNPLLSAFAPLPHLLSQPHPPPHMMLSPS 125

Query: 124 LSQDVW 125
            S   W
Sbjct: 126 SSSSKW 125

[Close]

BLAST of Cp4.1LG13g11400 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 4.1e-12
Identity = 39/85 (45.88%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 41  KFECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCH-------------------- 100
           K+ECQYCCR F NSQALGGHQNAH++ER+ LKRAQ+++                      
Sbjct: 72  KYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSASQFLRNPI 131

Query: 101 LNYFTPLHVQNWLSSSFVPQPPSTP 106
           ++ F P    + LSSS VPQP   P
Sbjct: 132 VSAFAP--PPHLLSSSAVPQPMGGP 154

[Close]

BLAST of Cp4.1LG13g11400 vs. TAIR 10
Match: AT1G10480.1 (zinc finger protein 5 )

HSP 1 Score: 58.5 bits (140), Expect = 5.5e-09
Identity = 36/102 (35.29%), Postives = 57/102 (55.88%), Query Frame = 0


Query: 2   ANSQLKLFGFNISEDHKSVSNFT-EPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGH 61
           ++  +KLFGF +    ++    T E   +    +      + ECQYC + F+NSQALGGH
Sbjct: 19  SDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQALGGH 78

Query: 62  QNAHREERRLLKRAQIKS--CHLNYFTPLHVQNWLSSSFVPQ 101
           QNAH++ER   KR Q+++    + Y+   H Q  +++SF  Q
Sbjct: 79  QNAHKKERLKKKRLQLQARRASIGYYLTNH-QQPITTSFQRQ 119

[Close]

BLAST of Cp4.1LG13g11400 vs. TAIR 10
Match: AT5G06650.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 9.5e-09
Identity = 31/82 (37.80%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 6  LKLFGFNISEDH---KSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGGHQN 65
          ++LFGF     H   +S  N+ E   +   +++     +F+C YC R F  SQALGGHQN
Sbjct: 19 IRLFGFEFGASHEESESKDNYNENNESIKDDNK---EKRFKCHYCFRNFPTSQALGGHQN 78

Query: 66 AHREERRLLKRAQIKSCHLNYF 85
          AH+ ER+  KR  + S    +F
Sbjct: 79 AHKRERQQTKRFNLHSNAAAFF 97

[Close]

BLAST of Cp4.1LG13g11400 vs. TAIR 10
Match: AT3G23140.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-08
Identity = 42/116 (36.21%), Postives = 56/116 (48.28%), Query Frame = 0


Query: 42  FECQYCCRGFSNSQALGGHQNAHREERRLLKRAQIKSCHLNYFTPLHVQNWLSS-SFVPQ 101
           ++C  C RGF+N QALGGH N HR ER     +   S    +  PL  Q+  SS +F   
Sbjct: 21  YDCDICKRGFTNPQALGGHNNIHRRERERYPSSSSSSHSFPFSLPLPSQSPSSSTNFTNP 80

Query: 102 PPSTPLQAAGLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLG 157
           PP  P   + LH  S+P ++     Q    + +  G G  A   +G   DL LSLG
Sbjct: 81  PPYFPTIESYLHQGSQPPINPSHNTQYFGSSSSSRGGGRFA---QGASHDLNLSLG 133

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g11400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39265	4.6e-16	42.86	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1	[more]
Q9C9H1	5.8e-11	45.88	Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1	[more]
Q39264	7.8e-08	35.29	Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1	[more]
Q9FG05	1.3e-07	37.80	Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1	[more]
P93751	3.0e-07	42.86	Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1	[more]

BLAST of Cp4.1LG13g11400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023550962.1	2.02e-113	100.00	zinc finger protein 6-like [Cucurbita pepo subsp. pepo] >KAG7015922.1 Zinc finge...	[more]
KAG6578343.1	8.23e-113	99.38	Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022993371.1	6.50e-110	97.50	zinc finger protein 6-like [Cucurbita maxima]	[more]
XP_022939247.1	1.31e-109	96.88	zinc finger protein 6-like [Cucurbita moschata]	[more]
XP_038886238.1	1.01e-71	71.69	zinc finger protein 6-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG13g11400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JW51	3.15e-110	97.50	zinc finger protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC111489415 PE=4 SV=1	[more]
A0A6J1FG99	6.36e-110	96.88	zinc finger protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC111445220 PE=4 SV...	[more]
A0A0A0LQ31	1.62e-28	67.06	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G404810 P...	[more]
A0A067KMC9	6.55e-23	54.00	C2H2-type domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_13000 P...	[more]
A0A6P5XKC3	7.92e-23	40.80	zinc finger protein 6-like OS=Durio zibethinus OX=66656 GN=LOC111283919 PE=4 SV=...	[more]

BLAST of Cp4.1LG13g11400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67030.1	3.2e-17	42.86	zinc finger protein 6	[more]
AT1G68360.1	4.1e-12	45.88	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G10480.1	5.5e-09	35.29	zinc finger protein 5	[more]
AT5G06650.1	9.5e-09	37.80	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G23140.1	1.2e-08	36.21	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 31..84 e-value: 3.2E-5 score: 25.7
None	No IPR available	PANTHER	PTHR46353:SF9	ZINC FINGER PROTEIN GIS3	coord: 3..105
IPR044299	Zinc finger protein GIS3/ZFP5/ZFP6	PANTHER	PTHR46353	ZINC FINGER PROTEIN 5	coord: 3..105
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 44..64
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 42..69 score: 11.426865
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 41..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g11400.1	Cp4.1LG13g11400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0010090	trichome morphogenesis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding