Cp4.1LG13g07630 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g07630
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Unknown protein
Location	Cp4.1LG13: 8544181 .. 8544774 (+)
RNA-Seq Expression	Cp4.1LG13g07630
Synteny	Cp4.1LG13g07630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCTGGAAACTACCACCAAATCTCTCTCAAGGAGGCTAACTCCGCCGCCAACTCCTCTTTTAGAGTCTATTACGGCGGCGCCACCGGTGCCATTCCGTTCAGATGGGAGTCACGCCCAGGCACTCCTAAGCATACTTATTCAGACACCTCTATCCCTCCTCTTACTCCTCCACCTTCTTACTATTCCTCTTCGCATTCTACTTCTAAAGCCTCTCCCAAGCCGACACGTTTCACTTCAATTTTTAGGAAATCTCGAACCGCCTCGTCTTTCTCCTTCTCCTCGTCCTCCTCTTCCTCGTCATGGTCTTCCTCTCGCTCGTCGCCGTCTGCTTTTGTTAGACCTAAATTCTTCAAACATCGTCGTTGCTTCTCGAATTCTCCAAGCTTGCCATTCGAGTGTAGCTTCGACGACAACGAGGGCGACGAGGCGGTGGGGAGCCCCGATTCTCCTACGTCGACTTTGTGCTTTGGTGGTGGTTCTTCTTCACGTAGAGCTTCATTATTCCGAGGTTGTTACCAGTTAGTGAGTGTGAAGAAGGCCTTGTTGTCCATTGTCGGACATGGATCTGCAAGCCGAGGTACTCATTAA

mRNA sequence

ATGGAAGCTGGAAACTACCACCAAATCTCTCTCAAGGAGGCTAACTCCGCCGCCAACTCCTCTTTTAGAGTCTATTACGGCGGCGCCACCGGTGCCATTCCGTTCAGATGGGAGTCACGCCCAGGCACTCCTAAGCATACTTATTCAGACACCTCTATCCCTCCTCTTACTCCTCCACCTTCTTACTATTCCTCTTCGCATTCTACTTCTAAAGCCTCTCCCAAGCCGACACGTTTCACTTCAATTTTTAGGAAATCTCGAACCGCCTCGTCTTTCTCCTTCTCCTCGTCCTCCTCTTCCTCGTCATGGTCTTCCTCTCGCTCGTCGCCGTCTGCTTTTGTTAGACCTAAATTCTTCAAACATCGTCGTTGCTTCTCGAATTCTCCAAGCTTGCCATTCGAGTGTAGCTTCGACGACAACGAGGGCGACGAGGCGGTGGGGAGCCCCGATTCTCCTACGTCGACTTTGTGCTTTGGTGGTGGTTCTTCTTCACGTAGAGCTTCATTATTCCGAGGTTGTTACCAGTTAGTGAGTGTGAAGAAGGCCTTGTTGTCCATTGTCGGACATGGATCTGCAAGCCGAGGTACTCATTAA

Coding sequence (CDS)

ATGGAAGCTGGAAACTACCACCAAATCTCTCTCAAGGAGGCTAACTCCGCCGCCAACTCCTCTTTTAGAGTCTATTACGGCGGCGCCACCGGTGCCATTCCGTTCAGATGGGAGTCACGCCCAGGCACTCCTAAGCATACTTATTCAGACACCTCTATCCCTCCTCTTACTCCTCCACCTTCTTACTATTCCTCTTCGCATTCTACTTCTAAAGCCTCTCCCAAGCCGACACGTTTCACTTCAATTTTTAGGAAATCTCGAACCGCCTCGTCTTTCTCCTTCTCCTCGTCCTCCTCTTCCTCGTCATGGTCTTCCTCTCGCTCGTCGCCGTCTGCTTTTGTTAGACCTAAATTCTTCAAACATCGTCGTTGCTTCTCGAATTCTCCAAGCTTGCCATTCGAGTGTAGCTTCGACGACAACGAGGGCGACGAGGCGGTGGGGAGCCCCGATTCTCCTACGTCGACTTTGTGCTTTGGTGGTGGTTCTTCTTCACGTAGAGCTTCATTATTCCGAGGTTGTTACCAGTTAGTGAGTGTGAAGAAGGCCTTGTTGTCCATTGTCGGACATGGATCTGCAAGCCGAGGTACTCATTAA

Protein sequence

MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPPSYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSSSWSSSRSSPSAFVRPKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQLVSVKKALLSIVGHGSASRGTH

Homology

[Close]

BLAST of Cp4.1LG13g07630 vs. NCBI nr
Match: XP_023551135.1 (putative protein TPRXL [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380 bits (976), Expect = 8.73e-133
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60
           MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP
Sbjct: 1   MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60

Query: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSSSWSSSRSSPSAFVRPKFFK 120
           SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSSSWSSSRSSPSAFVRPKFFK
Sbjct: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSSSWSSSRSSPSAFVRPKFFK 120

Query: 121 HRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQLVSVK 180
           HRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQLVSVK
Sbjct: 121 HRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQLVSVK 180

Query: 181 KALLSIVGHGSASRGTH 197
           KALLSIVGHGSASRGTH
Sbjct: 181 KALLSIVGHGSASRGTH 197

[Close]

BLAST of Cp4.1LG13g07630 vs. NCBI nr
Match: KAG6578473.1 (hypothetical protein SDJN03_22921, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 371 bits (952), Expect = 4.76e-129
Identity = 195/202 (96.53%), Postives = 196/202 (97.03%), Query Frame = 0


Query: 1   MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60
           MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP
Sbjct: 1   MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60

Query: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSSS-----WSSSRSSPSAFVR 120
           SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSS+S     WSSSRSSPSAFVR
Sbjct: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSASSSFASWSSSRSSPSAFVR 120

Query: 121 PKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQ 180
           PKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQ
Sbjct: 121 PKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQ 180

Query: 181 LVSVKKALLSIVGHGSASRGTH 197
           LVSVK ALLSIVGHGSASRGTH
Sbjct: 181 LVSVKNALLSIVGHGSASRGTH 202

[Close]

BLAST of Cp4.1LG13g07630 vs. NCBI nr
Match: KAG7016038.1 (hypothetical protein SDJN02_21142, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 370 bits (951), Expect = 6.52e-129
Identity = 194/201 (96.52%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 1   MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60
           MEAGNYHQ+SLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP
Sbjct: 1   MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60

Query: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSSS----WSSSRSSPSAFVRP 120
           SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSSS    WSSSRSSPSAFVRP
Sbjct: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSSSSFASWSSSRSSPSAFVRP 120

Query: 121 KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQL 180
           KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCY+L
Sbjct: 121 KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYRL 180

Query: 181 VSVKKALLSIVGHGSASRGTH 197
           VSVK ALLSIVGHGSASRGTH
Sbjct: 181 VSVKNALLSIVGHGSASRGTH 201

[Close]

BLAST of Cp4.1LG13g07630 vs. NCBI nr
Match: XP_022993995.1 (uncharacterized serine-rich protein C215.13-like [Cucurbita maxima])

HSP 1 Score: 370 bits (950), Expect = 9.60e-129
Identity = 195/202 (96.53%), Postives = 195/202 (96.53%), Query Frame = 0


Query: 1   MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60
           MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP
Sbjct: 1   MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60

Query: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSSS-----WSSSRSSPSAFVR 120
           SYYSSSHSTSK SPKPTRFTSIFRKSRTASSFSFSSSSSSSS     WSSSRSSPSAFVR
Sbjct: 61  SYYSSSHSTSKPSPKPTRFTSIFRKSRTASSFSFSSSSSSSSSSFTSWSSSRSSPSAFVR 120

Query: 121 PKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQ 180
           PKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQ
Sbjct: 121 PKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQ 180

Query: 181 LVSVKKALLSIVGHGSASRGTH 197
           LVSVK ALLSIVGHGSASRGTH
Sbjct: 181 LVSVKNALLSIVGHGSASRGTH 202

[Close]

BLAST of Cp4.1LG13g07630 vs. NCBI nr
Match: XP_022939362.1 (uncharacterized serine-rich protein C215.13-like [Cucurbita moschata])

HSP 1 Score: 369 bits (947), Expect = 2.66e-128
Identity = 193/201 (96.02%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 1   MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60
           MEAGNYHQ+SLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP
Sbjct: 1   MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60

Query: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSSS----WSSSRSSPSAFVRP 120
           SYYSSSHSTSK SPKPTRFTSIFRKSRTASSFSFSSSSSSSS    WSSSRSSPSAFVRP
Sbjct: 61  SYYSSSHSTSKVSPKPTRFTSIFRKSRTASSFSFSSSSSSSSSFASWSSSRSSPSAFVRP 120

Query: 121 KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQL 180
           KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCY+L
Sbjct: 121 KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYRL 180

Query: 181 VSVKKALLSIVGHGSASRGTH 197
           VSVK ALLSIVGHGSASRGTH
Sbjct: 181 VSVKNALLSIVGHGSASRGTH 201

[Close]

BLAST of Cp4.1LG13g07630 vs. ExPASy TrEMBL
Match: A0A6J1K022 (uncharacterized serine-rich protein C215.13-like OS=Cucurbita maxima OX=3661 GN=LOC111489820 PE=4 SV=1)

HSP 1 Score: 370 bits (950), Expect = 4.65e-129
Identity = 195/202 (96.53%), Postives = 195/202 (96.53%), Query Frame = 0


Query: 1   MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60
           MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP
Sbjct: 1   MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60

Query: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSSS-----WSSSRSSPSAFVR 120
           SYYSSSHSTSK SPKPTRFTSIFRKSRTASSFSFSSSSSSSS     WSSSRSSPSAFVR
Sbjct: 61  SYYSSSHSTSKPSPKPTRFTSIFRKSRTASSFSFSSSSSSSSSSFTSWSSSRSSPSAFVR 120

Query: 121 PKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQ 180
           PKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQ
Sbjct: 121 PKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQ 180

Query: 181 LVSVKKALLSIVGHGSASRGTH 197
           LVSVK ALLSIVGHGSASRGTH
Sbjct: 181 LVSVKNALLSIVGHGSASRGTH 202

[Close]

BLAST of Cp4.1LG13g07630 vs. ExPASy TrEMBL
Match: A0A6J1FGK5 (uncharacterized serine-rich protein C215.13-like OS=Cucurbita moschata OX=3662 GN=LOC111445301 PE=4 SV=1)

HSP 1 Score: 369 bits (947), Expect = 1.29e-128
Identity = 193/201 (96.02%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 1   MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60
           MEAGNYHQ+SLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP
Sbjct: 1   MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60

Query: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSSS----WSSSRSSPSAFVRP 120
           SYYSSSHSTSK SPKPTRFTSIFRKSRTASSFSFSSSSSSSS    WSSSRSSPSAFVRP
Sbjct: 61  SYYSSSHSTSKVSPKPTRFTSIFRKSRTASSFSFSSSSSSSSSFASWSSSRSSPSAFVRP 120

Query: 121 KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQL 180
           KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCY+L
Sbjct: 121 KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYRL 180

Query: 181 VSVKKALLSIVGHGSASRGTH 197
           VSVK ALLSIVGHGSASRGTH
Sbjct: 181 VSVKNALLSIVGHGSASRGTH 201

[Close]

BLAST of Cp4.1LG13g07630 vs. ExPASy TrEMBL
Match: A0A5A7UC51 (Putative serine-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G005080 PE=4 SV=1)

HSP 1 Score: 262 bits (670), Expect = 5.87e-86
Identity = 161/231 (69.70%), Postives = 170/231 (73.59%), Query Frame = 0


Query: 1   MEAGNYHQISLK------------------EANSAANSSFRVYYGGATGAIPFRWESRPG 60
           M+  NY QIS K                  E NS  NSSFRVYYGGATGAIPFRWESRPG
Sbjct: 1   MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 61  TPKHTYSDTSIPPLTPPPSYYSSSHSTSKASPKPTRFTSIF-----RKSRTASSFSFSSS 120
           TPKHT+SDTSIPPLTPPPSY+SSSHSTSKAS KPT  +SIF     RKSRT  SFS SS 
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSG 120

Query: 121 SSSSS---------WSSSRSSPSAFVRPKFFKHRRCFSNSPSLPFECSFDDNEGDEAVG- 180
           SSSSS         +SSS SSPS FVRPKFFK RR FS+ PSLPFE SFDD +GDE V  
Sbjct: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYSFDDKDGDEVVAG 180

Query: 181 --SPDSPTSTLCFGGGSSSRRASLFRGCYQLVSVKKALLSIVGHGSASRGT 196
             +P+SPTS LCFGGGSSSR ASLF GCYQLVSVKKALLSIVGHGSASRGT
Sbjct: 181 STAPNSPTSILCFGGGSSSR-ASLFGGCYQLVSVKKALLSIVGHGSASRGT 230

[Close]

BLAST of Cp4.1LG13g07630 vs. ExPASy TrEMBL
Match: A0A1S4E178 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103496610 PE=4 SV=1)

HSP 1 Score: 262 bits (670), Expect = 5.87e-86
Identity = 161/231 (69.70%), Postives = 170/231 (73.59%), Query Frame = 0


Query: 1   MEAGNYHQISLK------------------EANSAANSSFRVYYGGATGAIPFRWESRPG 60
           M+  NY QIS K                  E NS  NSSFRVYYGGATGAIPFRWESRPG
Sbjct: 1   MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 61  TPKHTYSDTSIPPLTPPPSYYSSSHSTSKASPKPTRFTSIF-----RKSRTASSFSFSSS 120
           TPKHT+SDTSIPPLTPPPSY+SSSHSTSKAS KPT  +SIF     RKSRT  SFS SS 
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSSG 120

Query: 121 SSSSS---------WSSSRSSPSAFVRPKFFKHRRCFSNSPSLPFECSFDDNEGDEAVG- 180
           SSSSS         +SSS SSPS FVRPKFFK RR FS+ PSLPFE SFDD +GDE V  
Sbjct: 121 SSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRHFSDIPSLPFEYSFDDKDGDEVVAG 180

Query: 181 --SPDSPTSTLCFGGGSSSRRASLFRGCYQLVSVKKALLSIVGHGSASRGT 196
             +P+SPTS LCFGGGSSSR ASLF GCYQLVSVKKALLSIVGHGSASRGT
Sbjct: 181 STAPNSPTSILCFGGGSSSR-ASLFGGCYQLVSVKKALLSIVGHGSASRGT 230

[Close]

BLAST of Cp4.1LG13g07630 vs. ExPASy TrEMBL
Match: A0A0A0K7T8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014460 PE=4 SV=1)

HSP 1 Score: 262 bits (669), Expect = 8.06e-86
Identity = 154/201 (76.62%), Postives = 163/201 (81.09%), Query Frame = 0


Query: 12  KEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPPSYYSSSHSTSK 71
           KE NS  NSSFRVYYGGATGAIPFRWESRPGTPKHT+SDTSIPPLTPPPSY+SSSHSTSK
Sbjct: 30  KELNSTTNSSFRVYYGGATGAIPFRWESRPGTPKHTFSDTSIPPLTPPPSYFSSSHSTSK 89

Query: 72  ASPKPTRFTSIF-----RKSRTASSFSFSSSSSSSS---------WSSSRSSPSAFVRPK 131
           AS KPT  +SIF     RKSRT+ SFS SS SSSSS         +SSS SSPS FVRPK
Sbjct: 90  ASSKPTLLSSIFPRLTPRKSRTSPSFSSSSGSSSSSSSLASWSSSFSSSSSSPSPFVRPK 149

Query: 132 FFKHRRCFSNSPSLPFECSFDDNEGDEAVG--SPDSPTSTLCFGGGSSSRRASLFRGCYQ 191
           FFK RR FS+ PSLPFE SFDD +GDE V   +P+SPTS LCFGGGSSSR ASLF GCYQ
Sbjct: 150 FFKRRRRFSDIPSLPFEYSFDDKDGDEVVAGSAPNSPTSILCFGGGSSSR-ASLFGGCYQ 209

Query: 192 LVSVKKALLSIVGHGSASRGT 196
           LVSVK ALLSIVGHGSASRGT
Sbjct: 210 LVSVKNALLSIVGHGSASRGT 229

[Close]

BLAST of Cp4.1LG13g07630 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). )

HSP 1 Score: 99.0 bits (245), Expect = 4.6e-21
Identity = 89/195 (45.64%), Postives = 118/195 (60.51%), Query Frame = 0


Query: 8   QISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTS--IPPLTPPPSYYSS 67
           +I +KE++   +SS   YYGGA  ++PF WE+RPGTPKH     S  +PPLTPPPSYYSS
Sbjct: 16  KIIVKESSQVNSSSRIYYYGGA--SVPFLWETRPGTPKHALFSESLRLPPLTPPPSYYSS 75

Query: 68  SHST----SKA-SPKPTRFT-SIFRKSRTASSFSFSSSSSSSSWSSSRSSPSAFVRPKFF 127
           S S+    SKA + K TRF  ++  +  +  SFS+SS+SSSSS S S SSP + V     
Sbjct: 76  SSSSGNKLSKARTIKQTRFVKTLLSRHVSRPSFSWSSASSSSSSSYSSSSPPSKVE---H 135

Query: 128 KHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQLVSV 187
           + R+C+S S S   E   DD E  E V S  SPTSTLC+  G SS           + S+
Sbjct: 136 RPRKCYSCSRSYVKE---DDEE--EIVSS--SPTSTLCYKRGFSS----------SMGSM 188

Query: 188 KKALLSIVGHGSASR 195
           K+AL S++ HGS+ +
Sbjct: 196 KRALCSVLSHGSSRK 188

[Close]

BLAST of Cp4.1LG13g07630 vs. TAIR 10
Match: AT3G56260.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40475.1). )

HSP 1 Score: 69.3 bits (168), Expect = 3.9e-12
Identity = 69/163 (42.33%), Postives = 90/163 (55.21%), Query Frame = 0


Query: 25  YYGGATGAIPFRWESRPGTPK-HTYSDTSIP-PLTPPPSYYSSS-----HSTSKASPKPT 84
           YYGGA  +IPF WESRPGTPK H  SD+S+P PLTPPPSYYSS       + SK   K +
Sbjct: 18  YYGGA--SIPFIWESRPGTPKNHLCSDSSLPLPLTPPPSYYSSGILSTPRTQSKVRSKLS 77

Query: 85  RFT--SIFRKSRTASSFSFSSSSSSSSWSSSRSSPSAFVRPKFFKHRRCFSNSPSLPFEC 144
           +F   S+F   R ++  S  ++SSS SWSS+ SS S    P     +R   +  S     
Sbjct: 78  KFLSFSMFSDLRRSNHGSKKTASSSFSWSSTSSSSSFSSSPPHSLKKRMSHDKKSPLLYA 137

Query: 145 SFDDNEGDEAVGSPDSPTSTLCF--GG--GSSSRRASLFRGCY 175
           +++++E         SPTSTLC   GG  G SS   S+ R  +
Sbjct: 138 NYEEDE------LRSSPTSTLCCSNGGRLGCSSSMGSVTRALF 172

[Close]

BLAST of Cp4.1LG13g07630 vs. TAIR 10
Match: AT1G06930.1 (unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi - 125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 3.6e-10
Identity = 52/116 (44.83%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 25  YYGGATGAIPFRWESRPGTPK-----------HTYSDTSIP---PLTPPPSY-YSSSHST 84
           YYGG++ A+PF+WES+PGTP+           ++ SD + P   PLTPPPSY Y+S  ST
Sbjct: 24  YYGGSSAAVPFKWESQPGTPRRLSKRSSSSGFNSDSDFNFPVSAPLTPPPSYFYASPSST 83

Query: 85  SKASPKPTR--FTSIFRKSRTASSFSFSSSSSSSSWSSSRSSPSAFVRPKFFKHRR 124
              SPK T   F+S+  K+R+  S   SSSSSSSS     S PS+ +R     +RR
Sbjct: 84  KHVSPKKTNTLFSSLLSKNRSVPSSPASSSSSSSS-----SVPSSPLRTSDLSNRR 134

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BLAST of Cp4.1LG13g07630 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.7e-07
Identity = 51/131 (38.93%), Postives = 64/131 (48.85%), Query Frame = 0


Query: 16  SAANSSFRV-YYGGATGAIPFRWESRPGTPKHTYSD-TSIPPLTPPPSYYS-SSHSTSKA 75
           SAA  SFR+ YY GA GA+PF WES PGTPKH  S+  ++PPLTPPPS++S S     + 
Sbjct: 57  SAACPSFRIYYYDGAAGAVPFEWESHPGTPKHPSSELPTLPPLTPPPSHFSFSGDQIRRR 116

Query: 76  SPKPTRFTSIFRKSRTASSFSFSSSSSSSSWSSSRSSPSAFVRPKFFKHRRCFSNSPSLP 135
           S K T+       +R    F  S   +  +   S SSP                  PSL 
Sbjct: 117 SKKSTKKILALIPTRL---FWLSGDHNGKAKKLSASSP------------------PSLS 166

Query: 136 FECSFDDNEGD 144
                D+NE D
Sbjct: 177 ERVLIDENEYD 166

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g07630 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG13g07630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551135.1	8.73e-133	100.00	putative protein TPRXL [Cucurbita pepo subsp. pepo]	[more]
KAG6578473.1	4.76e-129	96.53	hypothetical protein SDJN03_22921, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7016038.1	6.52e-129	96.52	hypothetical protein SDJN02_21142, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022993995.1	9.60e-129	96.53	uncharacterized serine-rich protein C215.13-like [Cucurbita maxima]	[more]
XP_022939362.1	2.66e-128	96.02	uncharacterized serine-rich protein C215.13-like [Cucurbita moschata]	[more]

BLAST of Cp4.1LG13g07630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K022	4.65e-129	96.53	uncharacterized serine-rich protein C215.13-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1FGK5	1.29e-128	96.02	uncharacterized serine-rich protein C215.13-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A5A7UC51	5.87e-86	69.70	Putative serine-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A1S4E178	5.87e-86	69.70	Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103496610 PE=4 SV=1	[more]
A0A0A0K7T8	8.06e-86	76.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014460 PE=4 SV=1	[more]

BLAST of Cp4.1LG13g07630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40475.1	4.6e-21	45.64	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G56260.2	3.9e-12	42.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G06930.1	3.6e-10	44.83	unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; ...	[more]
AT5G01790.1	1.7e-07	38.93	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..78
None	No IPR available	PANTHER	PTHR33257	OS05G0165500 PROTEIN	coord: 11..175
None	No IPR available	PANTHER	PTHR33257:SF24	EXPRESSED PROTEIN	coord: 11..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g07630.1	Cp4.1LG13g07630.1	mRNA