Cp4.1LG13g07400 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG13g07400
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptioncell wall protein RBR3-like isoform X2
LocationCp4.1LG13: 8553432 .. 8556470 (-)
RNA-Seq ExpressionCp4.1LG13g07400
SyntenyCp4.1LG13g07400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATATATTTTAAAGGTAGAAATGAATTATTAGATTTTTTGAAATTCATACAAAGTTAATAGTGAGGCCCAGGCTTTGGACAAAATGGTTAAGCCCAAAACGTACGTTAAGGCCCATAATATTGGCCCATCGGATGACGAACATAAGATTCCTCTCAGGCCAGAAGGCAGAAGCGCTAAGTTCATTTCGCGCCCGACTACACTCACCCTCGCAATTCTTCTCGTCCAACTTTCAATTTCAATAGCATTTTCCCGCCACTGTCACTTCGATCTTCCTCCGCTCAAGTTCTTCAGCGCATCTTCTTCACCATGAAGATTATTGAACACTTCCTTCTCCCCCTGTGAAATGTGAAGGACTAGAGATGGAATCCCAGAAACAAAATCTCAGTGCTCGAAAACCCTTCTCGGATTGTACCAATACCATCATCTCCTCGCAATCGTCGGCTTCCAATTTCTCCGCTCCGATCAAACCGCGCAAGCGTGTAATTAAGTCTGCGGTTAAAGATGTTGTCAACATTCAGAAGAAATGCGAGCCAAGTTTTGCGTCTGAATCTACATCCCTTAATTTGCGAGTTTCGAACCCTAGTTCTGATTTTCTTCCTACAGAACCTAGCTCTGATTTTAATCCTGCAGAAACAAGCCCTACTTCTGATTCTCTTCCTCCAGAACCTAGTTCTCGCCGTCTTCCTACGGAAGCCTCCACTCCTTCGCGGCGTACTGATTTGTCGTCTAGTTCAGGTAATGGTTGTACTTTCTGGTATTCGTCGCTATCGTTGTTTGGTCCTTGATTCTTTTGGTCGGTTTAGTTTCAGCAACTGTTATTCCCTATTTCTCAAAATAGTTCAGTTTACTTGAAATACTACGTTGGAATTAAGGATTACAAGCTATTTTGGGATTGTTAGAAATATTAGGTAGAGGAGATTTGTTGTTTTACTGTTATGCTTCTTGTGTGCGGTGTTGAAATTTCTGCTTGTGAAAGAGTATTCTTCTGATACGTATGGTTATATGTACTAGGAAATTCAATATTTGGGATTTTTTATCTTCGATTTTATCTTCAATTTTTTATATTACGCTTTGACGTCAGGAACCGATCGCGTTCCGGAGTCCCAGTCCTTCTACAGTCGAAGGCGCCCTACGAATAAAAGGAAGAGCGTTGAGATAGCAGTTCCACCATTTATTTTCTCTACCGCATCGAAAATCCAAACTGGGTATGAAGCTCTTTGCACTTTTCCCCATATTTGAGACAAAATCTCCTCTCGCAATTAAATCTCTTATGTGCTTAGTGGATTCAACCAGAGGGATTTAATTGTGGGTTTACAATGCCTAATGATGGTGTTACGATGCTATTGGGAATCCGATGGTTGTTAAGTTTCATAGGAGAAAGTTGCCTTCTATCTGCAATAATTATCAACCTGGGCGGCCCCTGCCCTACTTTTTGGAAAAATTAAACGGTTCTCTGGTCCTGTTTTTGGAAATTTTTTAGTGTTCTAACAATTACTGGTCTGGGTTAATCTGGTATTACTCTTACTTTATCTACAATGAGGAAAAATTGCAGCCACCTAAAACCGTGTTTGTCAACTTTTTATTTTTTTGTTTTTTTATTTTTTGTGATAGATTTGTCGAGCCTCAATTGTTTGACTGCCTTAGATATGAAGCTTTATTTTTTGTTACTATTTTATAATTTGATTTGATGGAAAAGTAAACTTAAGATAGTGGGCACGAATGTTGACAGTACTACTACGACATTGTTTTTCTTCTAAACATATGGATTAATGATACAAGAAATATGTCTCCTAATATGAGATCCCACATTGGTTGGAGAGAGCAATGAACTATTTCTTATAAGTGTGTGGAAACCTCTCCCTAGTGGACGCGTTGTAAAACCTTGAGGGGAAACCCAAAAGGGTTCTCAAAGAGGATAATATCTACTTGCGGTGGGTTTAAGCCCTTACATACAAAGAGTTGTTACACCTAATTTCTCATTTACTCTTTATTACTCATTTGTTTGTGAATTGTTCCCTGCTTTTATGCAGGGGTGAAAGAAGAGATGGATACAGTAGCACATCCAAAGCAAGAACCGTTCCTTATAACAAGGTCCGTCTGAAAATAATAGTACTGCCCATTTTCTTTTATCTGTCAATCTAAAATTATGGTACACTTTTATCCTTATCTTTGCTCCTTGCTTGTTTAGGCTTTAATTTGATGCTTATTCTTTATGGTAGCAAAATAGGAGTTCTGACCTTTCTCTCAAAAATGTGATGTTATCTGTACTTATCTGTACCACAATTAATGAGCTCTGTTCCTGATTAATTGGTCCCATTGTATGAATGTTAGGTTAACCCTAGTCATGGCTTAGGCAATATTTCACCAACTTCTATTTATCTATATCCACGGGATATTTAACTAGCTAGATAGAGGCTGACTTTTTTTTTTTTTTTTTTTCTACTTCTTAAAGAATAGTAAATACTTGTTATGAAACAAGAGTCCCTTTCAGTAGCTTAACTGTTAAGATCACCGCATCTCCTTCTCTTTCACTTTGGCCAATATGAGTTTACCTATGGTATGGTAATTGACTAATTGTACAGAGAAAAGTTTCTCTTGTTTACCACTGGCCAATAACTGTTTGTTAGCAGTCGGCTACTGGAAGTTTGAAATCATTACCTCAACAAAATTATCTAATGATGAGTAGCTATTATTTTTTTTCAGAGGCAGTGTGCCATAATGTATGGGGAAGATGAGTCCAATGTTGAGCTTCCACGGGAATTTGTTGAACAGAAGAAGGCATATTTTTCAGAAGTAGATGCGTTTGAACTACCAGAGGAGGCTAAATCATCCGACTCGGAGTAGACGACGGTTTTTTATAGTTATAACCATTCAAGTTAGTAGTCTGTATTGTTTAAGTTCTTGTTCATTACTCATAGAAACGGTTTGCTCTGTTCTGTCATTCATTTAATATACAGTGTAATTTTGGAAGCATGAAACTAACGCCATAAAGTTTTATCAATAGTTTTGTCAAGTCTAAAAATTAATCAATAATAGC

mRNA sequence

ATATATATTTTAAAGGTAGAAATGAATTATTAGATTTTTTGAAATTCATACAAAGTTAATAGTGAGGCCCAGGCTTTGGACAAAATGGTTAAGCCCAAAACGTACGTTAAGGCCCATAATATTGGCCCATCGGATGACGAACATAAGATTCCTCTCAGGCCAGAAGGCAGAAGCGCTAAGTTCATTTCGCGCCCGACTACACTCACCCTCGCAATTCTTCTCGTCCAACTTTCAATTTCAATAGCATTTTCCCGCCACTGTCACTTCGATCTTCCTCCGCTCAAGTTCTTCAGCGCATCTTCTTCACCATGAAGATTATTGAACACTTCCTTCTCCCCCTGTGAAATGTGAAGGACTAGAGATGGAATCCCAGAAACAAAATCTCAGTGCTCGAAAACCCTTCTCGGATTGTACCAATACCATCATCTCCTCGCAATCGTCGGCTTCCAATTTCTCCGCTCCGATCAAACCGCGCAAGCGTGTAATTAAGTCTGCGGTTAAAGATGTTGTCAACATTCAGAAGAAATGCGAGCCAAGTTTTGCGTCTGAATCTACATCCCTTAATTTGCGAGTTTCGAACCCTAGTTCTGATTTTCTTCCTACAGAACCTAGCTCTGATTTTAATCCTGCAGAAACAAGCCCTACTTCTGATTCTCTTCCTCCAGAACCTAGTTCTCGCCGTCTTCCTACGGAAGCCTCCACTCCTTCGCGGCGTACTGATTTGTCGTCTAGTTCAGGAACCGATCGCGTTCCGGAGTCCCAGTCCTTCTACAGTCGAAGGCGCCCTACGAATAAAAGGAAGAGCGTTGAGATAGCAGTTCCACCATTTATTTTCTCTACCGCATCGAAAATCCAAACTGGGGGTGAAAGAAGAGATGGATACAGTAGCACATCCAAAGCAAGAACCGTTCCTTATAACAAGAGGCAGTGTGCCATAATGTATGGGGAAGATGAGTCCAATGTTGAGCTTCCACGGGAATTTGTTGAACAGAAGAAGGCATATTTTTCAGAAGTAGATGCGTTTGAACTACCAGAGGAGGCTAAATCATCCGACTCGGAGTAGACGACGGTTTTTTATAGTTATAACCATTCAAGTTAGTAGTCTGTATTGTTTAAGTTCTTGTTCATTACTCATAGAAACGGTTTGCTCTGTTCTGTCATTCATTTAATATACAGTGTAATTTTGGAAGCATGAAACTAACGCCATAAAGTTTTATCAATAGTTTTGTCAAGTCTAAAAATTAATCAATAATAGC

Coding sequence (CDS)

ATGGAATCCCAGAAACAAAATCTCAGTGCTCGAAAACCCTTCTCGGATTGTACCAATACCATCATCTCCTCGCAATCGTCGGCTTCCAATTTCTCCGCTCCGATCAAACCGCGCAAGCGTGTAATTAAGTCTGCGGTTAAAGATGTTGTCAACATTCAGAAGAAATGCGAGCCAAGTTTTGCGTCTGAATCTACATCCCTTAATTTGCGAGTTTCGAACCCTAGTTCTGATTTTCTTCCTACAGAACCTAGCTCTGATTTTAATCCTGCAGAAACAAGCCCTACTTCTGATTCTCTTCCTCCAGAACCTAGTTCTCGCCGTCTTCCTACGGAAGCCTCCACTCCTTCGCGGCGTACTGATTTGTCGTCTAGTTCAGGAACCGATCGCGTTCCGGAGTCCCAGTCCTTCTACAGTCGAAGGCGCCCTACGAATAAAAGGAAGAGCGTTGAGATAGCAGTTCCACCATTTATTTTCTCTACCGCATCGAAAATCCAAACTGGGGGTGAAAGAAGAGATGGATACAGTAGCACATCCAAAGCAAGAACCGTTCCTTATAACAAGAGGCAGTGTGCCATAATGTATGGGGAAGATGAGTCCAATGTTGAGCTTCCACGGGAATTTGTTGAACAGAAGAAGGCATATTTTTCAGAAGTAGATGCGTTTGAACTACCAGAGGAGGCTAAATCATCCGACTCGGAGTAG

Protein sequence

MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSFASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTDLSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKARTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEEAKSSDSE
Homology
BLAST of Cp4.1LG13g07400 vs. NCBI nr
Match: XP_023551283.1 (uncharacterized protein LOC111809149 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 437 bits (1123), Expect = 5.32e-154
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0

Query: 1   MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
           MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF
Sbjct: 1   MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60

Query: 61  ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120
           ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD
Sbjct: 61  ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120

Query: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
           LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA
Sbjct: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180

Query: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEEAKSSDSE 233
           RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEEAKSSDSE
Sbjct: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEEAKSSDSE 233

BLAST of Cp4.1LG13g07400 vs. NCBI nr
Match: KAG6578470.1 (hypothetical protein SDJN03_22918, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 419 bits (1077), Expect = 5.66e-147
Identity = 227/234 (97.01%), Postives = 229/234 (97.86%), Query Frame = 0

Query: 1   MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
           MESQ QNLSARKPFSDCTNTI+SSQSS SNFSAPIKPRKRVIKSAVKDVVNIQKK EPSF
Sbjct: 1   MESQIQNLSARKPFSDCTNTIVSSQSSPSNFSAPIKPRKRVIKSAVKDVVNIQKKREPSF 60

Query: 61  ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120
           ASESTSLNLRVSNPSSDFLPTEPSSDFNPAET+PTSDSLPPEPSSRRLPTEASTPSRRTD
Sbjct: 61  ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETNPTSDSLPPEPSSRRLPTEASTPSRRTD 120

Query: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
           LSSSSGTDRVPE QSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA
Sbjct: 121 LSSSSGTDRVPEPQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180

Query: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEE-AKSSDSE 233
           RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEE AKSSDSE
Sbjct: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEEEAKSSDSE 234

BLAST of Cp4.1LG13g07400 vs. NCBI nr
Match: XP_022939234.1 (uncharacterized protein LOC111445210 [Cucurbita moschata])

HSP 1 Score: 407 bits (1046), Expect = 3.00e-142
Identity = 221/234 (94.44%), Postives = 224/234 (95.73%), Query Frame = 0

Query: 1   MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
           MESQ QNLSARKPFSDCTNTI+SSQ S SNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF
Sbjct: 1   MESQIQNLSARKPFSDCTNTIVSSQLSPSNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60

Query: 61  ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120
           ASESTS NLRVSNPSS FLPTEPSSDFNPAET+PTSDSL PEPSSRRLPTEASTP RRTD
Sbjct: 61  ASESTSFNLRVSNPSSGFLPTEPSSDFNPAETNPTSDSLLPEPSSRRLPTEASTPLRRTD 120

Query: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
           LSSSSGTDRVPE QSFYSRRRP+NKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA
Sbjct: 121 LSSSSGTDRVPEPQSFYSRRRPSNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180

Query: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEE-AKSSDSE 233
           RTVPYNKRQCAI YGEDESNVELPREFVEQKKAYFSEVDAFELPEE AKSSDSE
Sbjct: 181 RTVPYNKRQCAITYGEDESNVELPREFVEQKKAYFSEVDAFELPEEEAKSSDSE 234

BLAST of Cp4.1LG13g07400 vs. NCBI nr
Match: XP_022993386.1 (uncharacterized protein LOC111489423 [Cucurbita maxima])

HSP 1 Score: 397 bits (1021), Expect = 1.93e-138
Identity = 217/234 (92.74%), Postives = 222/234 (94.87%), Query Frame = 0

Query: 1   MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
           MESQKQNLSARKPFSDCTNTI+SSQSSASNFSAPIKP KRVIKSAV+D VNIQKK EPSF
Sbjct: 1   MESQKQNLSARKPFSDCTNTIVSSQSSASNFSAPIKPCKRVIKSAVEDDVNIQKKGEPSF 60

Query: 61  ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120
            SESTSLNLRVSNPSSD LPTEP SDFNP ET+PTSDSLPPEPSSRRLPTEASTPSRRTD
Sbjct: 61  PSESTSLNLRVSNPSSDSLPTEPISDFNPVETNPTSDSLPPEPSSRRLPTEASTPSRRTD 120

Query: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
           LSS SGTDRVPE QSFYSRR PTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA
Sbjct: 121 LSSRSGTDRVPEPQSFYSRRCPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180

Query: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEE-AKSSDSE 233
           RTVPY+KRQCAI+YGEDESNVELPREFVE KKAYFSEVDAFELPEE AKSSDSE
Sbjct: 181 RTVPYSKRQCAIIYGEDESNVELPREFVEHKKAYFSEVDAFELPEEEAKSSDSE 234

BLAST of Cp4.1LG13g07400 vs. NCBI nr
Match: KAG7016036.1 (Peroxidase 52 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 364 bits (934), Expect = 1.28e-122
Identity = 206/234 (88.03%), Postives = 208/234 (88.89%), Query Frame = 0

Query: 1   MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
           MESQ QNLSARKPFSDCTNTI+SSQSS SNFSAPIKPRKRVIKSAVKDVVNIQKK EPSF
Sbjct: 1   MESQIQNLSARKPFSDCTNTIVSSQSSPSNFSAPIKPRKRVIKSAVKDVVNIQKKREPSF 60

Query: 61  ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120
           ASESTSLNLRVSNPSSDFLPTEPSSDFNPAET+PTSDSLPPEPSSRRLPTEASTPSRRTD
Sbjct: 61  ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETNPTSDSLPPEPSSRRLPTEASTPSRRTD 120

Query: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
           LSSSSGTDRVPE QSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTG             
Sbjct: 121 LSSSSGTDRVPEPQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTG------------- 180

Query: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEE-AKSSDSE 233
                   QCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEE AKSSDSE
Sbjct: 181 --------QCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEEEAKSSDSE 213

BLAST of Cp4.1LG13g07400 vs. ExPASy TrEMBL
Match: A0A6J1FGK1 (uncharacterized protein LOC111445210 OS=Cucurbita moschata OX=3662 GN=LOC111445210 PE=4 SV=1)

HSP 1 Score: 407 bits (1046), Expect = 1.45e-142
Identity = 221/234 (94.44%), Postives = 224/234 (95.73%), Query Frame = 0

Query: 1   MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
           MESQ QNLSARKPFSDCTNTI+SSQ S SNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF
Sbjct: 1   MESQIQNLSARKPFSDCTNTIVSSQLSPSNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60

Query: 61  ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120
           ASESTS NLRVSNPSS FLPTEPSSDFNPAET+PTSDSL PEPSSRRLPTEASTP RRTD
Sbjct: 61  ASESTSFNLRVSNPSSGFLPTEPSSDFNPAETNPTSDSLLPEPSSRRLPTEASTPLRRTD 120

Query: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
           LSSSSGTDRVPE QSFYSRRRP+NKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA
Sbjct: 121 LSSSSGTDRVPEPQSFYSRRRPSNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180

Query: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEE-AKSSDSE 233
           RTVPYNKRQCAI YGEDESNVELPREFVEQKKAYFSEVDAFELPEE AKSSDSE
Sbjct: 181 RTVPYNKRQCAITYGEDESNVELPREFVEQKKAYFSEVDAFELPEEEAKSSDSE 234

BLAST of Cp4.1LG13g07400 vs. ExPASy TrEMBL
Match: A0A6J1JW66 (uncharacterized protein LOC111489423 OS=Cucurbita maxima OX=3661 GN=LOC111489423 PE=4 SV=1)

HSP 1 Score: 397 bits (1021), Expect = 9.37e-139
Identity = 217/234 (92.74%), Postives = 222/234 (94.87%), Query Frame = 0

Query: 1   MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
           MESQKQNLSARKPFSDCTNTI+SSQSSASNFSAPIKP KRVIKSAV+D VNIQKK EPSF
Sbjct: 1   MESQKQNLSARKPFSDCTNTIVSSQSSASNFSAPIKPCKRVIKSAVEDDVNIQKKGEPSF 60

Query: 61  ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120
            SESTSLNLRVSNPSSD LPTEP SDFNP ET+PTSDSLPPEPSSRRLPTEASTPSRRTD
Sbjct: 61  PSESTSLNLRVSNPSSDSLPTEPISDFNPVETNPTSDSLPPEPSSRRLPTEASTPSRRTD 120

Query: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
           LSS SGTDRVPE QSFYSRR PTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA
Sbjct: 121 LSSRSGTDRVPEPQSFYSRRCPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180

Query: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEE-AKSSDSE 233
           RTVPY+KRQCAI+YGEDESNVELPREFVE KKAYFSEVDAFELPEE AKSSDSE
Sbjct: 181 RTVPYSKRQCAIIYGEDESNVELPREFVEHKKAYFSEVDAFELPEEEAKSSDSE 234

BLAST of Cp4.1LG13g07400 vs. ExPASy TrEMBL
Match: A0A6J1JRU8 (uncharacterized protein LOC111487776 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487776 PE=4 SV=1)

HSP 1 Score: 307 bits (787), Expect = 3.97e-103
Identity = 171/234 (73.08%), Postives = 192/234 (82.05%), Query Frame = 0

Query: 1   MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
           MESQK+NL  RKP +DCTNT++SSQSSASN SA IKPRKRV+K AVKDVVN +K+   SF
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKPAVKDVVNNEKEGVSSF 60

Query: 61  ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120
           AS STS+NL+ SNPSSDFLPT+PSS+  PAE++PTSDSLP EPSS  LP E STPSR  D
Sbjct: 61  ASASTSVNLQASNPSSDFLPTQPSSNLPPAESTPTSDSLPTEPSSSSLPAEVSTPSRLVD 120

Query: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
           L SSSGTDRVPE QSFYSRR P N+RKS E A  PF+FSTASKI T GE+R   SS S+A
Sbjct: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFVFSTASKILTRGEKRAADSSPSRA 180

Query: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFEL-PEEAKSSDSE 233
           RTVPY KRQ   +YGEDES +ELPREFVE++KAYFSEVDAFEL  EEAKSSDSE
Sbjct: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234

BLAST of Cp4.1LG13g07400 vs. ExPASy TrEMBL
Match: A0A6J1GKJ2 (uncharacterized protein LOC111455207 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455207 PE=4 SV=1)

HSP 1 Score: 301 bits (771), Expect = 1.08e-100
Identity = 168/234 (71.79%), Postives = 192/234 (82.05%), Query Frame = 0

Query: 1   MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
           MESQK+NL  RKP +DCTNT++SSQSSASN SA IKPRKRV+KSAVKDVVN +K+   S 
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60

Query: 61  ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120
           AS STS+NL+ SNPSS+FLPT+PSS+  PAE++P+SDSLP EPSS  +P E STPSR  D
Sbjct: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD 120

Query: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
           L SSSGTDRVPE QSFYSRR P N+RKS E A  PFIFSTASKI + GE+R   SS S+A
Sbjct: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRA 180

Query: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFEL-PEEAKSSDSE 233
           RTVPY KRQ   +YGEDES +ELPREFVE++KAYFSEVDAFEL  EEAKSSDSE
Sbjct: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234

BLAST of Cp4.1LG13g07400 vs. ExPASy TrEMBL
Match: A0A6J1JPQ1 (cell wall protein RBR3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487776 PE=4 SV=1)

HSP 1 Score: 298 bits (764), Expect = 1.17e-99
Identity = 169/234 (72.22%), Postives = 190/234 (81.20%), Query Frame = 0

Query: 1   MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
           MESQK+NL  RKP +DCTNT++SSQSSASN SA IKPRKRV+K AVKDVVN +K+   SF
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKPAVKDVVNNEKEGVSSF 60

Query: 61  ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120
           AS STS+NL+ SNPSSDFLPT+PSS+  PAE++PTSDSLP EPSS  LP E STPSR  D
Sbjct: 61  ASASTSVNLQASNPSSDFLPTQPSSNLPPAESTPTSDSLPTEPSSSSLPAEVSTPSRLVD 120

Query: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
           L SSS  DRVPE QSFYSRR P N+RKS E A  PF+FSTASKI T GE+R   SS S+A
Sbjct: 121 LPSSS--DRVPEPQSFYSRRHPANRRKSTETAAAPFVFSTASKILTRGEKRAADSSPSRA 180

Query: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFEL-PEEAKSSDSE 233
           RTVPY KRQ   +YGEDES +ELPREFVE++KAYFSEVDAFEL  EEAKSSDSE
Sbjct: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 232

BLAST of Cp4.1LG13g07400 vs. TAIR 10
Match: AT3G56250.1 (unknown protein; Has 109 Blast hits to 83 proteins in 41 species: Archae - 0; Bacteria - 6; Metazoa - 18; Fungi - 20; Plants - 21; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 4.9e-06
Identity = 73/241 (30.29%), Postives = 114/241 (47.30%), Query Frame = 0

Query: 11  RKPFSDCTNTII-SSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSFASESTSLNL 70
           RKP +DCTNT+  SSQ S+S+    +K     + S++K +V            E T+L  
Sbjct: 13  RKPLADCTNTVSRSSQQSSSS----VKFANPSLTSSLKRLV------------EQTTLK- 72

Query: 71  RVSNPSSDFLPTEPSSDFNPAETSPTSDSLP----PEPSSRR----LPTEASTPSR-RTD 130
                       E   D N + T+P   S P      P +RR    L + AS PSR +T 
Sbjct: 73  ------------EKPKDVNTSATAPEIASRPITTDVRPVTRRMSADLASPASAPSRPQTS 132

Query: 131 LSSSSGTDR-VPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQ------TGGERRDG 190
            S    +D+   E  S Y+ RR  + +K  + A      S A++I+      +G + R  
Sbjct: 133 RSDMGVSDKDFTEPWSVYTVRRKASGQKRSKDASSS--TSAAARIRLDLSSSSGKKTRQA 192

Query: 191 YSSTSKARTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELP-EEAKSSDS 234
             +  K   V   KRQ  +   +++      ++++E++KAYF+E+DAFELP EE  +SDS
Sbjct: 193 SENKKKTLKVAPKKRQRTVKQEKEDPVSAACQDYIEKQKAYFAEIDAFELPVEEVSNSDS 222

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_023551283.15.32e-154100.00uncharacterized protein LOC111809149 [Cucurbita pepo subsp. pepo][more]
KAG6578470.15.66e-14797.01hypothetical protein SDJN03_22918, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022939234.13.00e-14294.44uncharacterized protein LOC111445210 [Cucurbita moschata][more]
XP_022993386.11.93e-13892.74uncharacterized protein LOC111489423 [Cucurbita maxima][more]
KAG7016036.11.28e-12288.03Peroxidase 52 [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
A0A6J1FGK11.45e-14294.44uncharacterized protein LOC111445210 OS=Cucurbita moschata OX=3662 GN=LOC1114452... [more]
A0A6J1JW669.37e-13992.74uncharacterized protein LOC111489423 OS=Cucurbita maxima OX=3661 GN=LOC111489423... [more]
A0A6J1JRU83.97e-10373.08uncharacterized protein LOC111487776 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1GKJ21.08e-10071.79uncharacterized protein LOC111455207 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JPQ11.17e-9972.22cell wall protein RBR3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114877... [more]
Match NameE-valueIdentityDescription
AT3G56250.14.9e-0630.29unknown protein; Has 109 Blast hits to 83 proteins in 41 species: Archae - 0; Ba... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..138
NoneNo IPR availablePANTHERPTHR35740:SF1OS12G0111700 PROTEINcoord: 2..232
NoneNo IPR availablePANTHERPTHR35740OS12G0111700 PROTEINcoord: 2..232

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG13g07400.1Cp4.1LG13g07400.1mRNA