Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATATATTTTAAAGGTAGAAATGAATTATTAGATTTTTTGAAATTCATACAAAGTTAATAGTGAGGCCCAGGCTTTGGACAAAATGGTTAAGCCCAAAACGTACGTTAAGGCCCATAATATTGGCCCATCGGATGACGAACATAAGATTCCTCTCAGGCCAGAAGGCAGAAGCGCTAAGTTCATTTCGCGCCCGACTACACTCACCCTCGCAATTCTTCTCGTCCAACTTTCAATTTCAATAGCATTTTCCCGCCACTGTCACTTCGATCTTCCTCCGCTCAAGTTCTTCAGCGCATCTTCTTCACCATGAAGATTATTGAACACTTCCTTCTCCCCCTGTGAAATGTGAAGGACTAGAGATGGAATCCCAGAAACAAAATCTCAGTGCTCGAAAACCCTTCTCGGATTGTACCAATACCATCATCTCCTCGCAATCGTCGGCTTCCAATTTCTCCGCTCCGATCAAACCGCGCAAGCGTGTAATTAAGTCTGCGGTTAAAGATGTTGTCAACATTCAGAAGAAATGCGAGCCAAGTTTTGCGTCTGAATCTACATCCCTTAATTTGCGAGTTTCGAACCCTAGTTCTGATTTTCTTCCTACAGAACCTAGCTCTGATTTTAATCCTGCAGAAACAAGCCCTACTTCTGATTCTCTTCCTCCAGAACCTAGTTCTCGCCGTCTTCCTACGGAAGCCTCCACTCCTTCGCGGCGTACTGATTTGTCGTCTAGTTCAGGTAATGGTTGTACTTTCTGGTATTCGTCGCTATCGTTGTTTGGTCCTTGATTCTTTTGGTCGGTTTAGTTTCAGCAACTGTTATTCCCTATTTCTCAAAATAGTTCAGTTTACTTGAAATACTACGTTGGAATTAAGGATTACAAGCTATTTTGGGATTGTTAGAAATATTAGGTAGAGGAGATTTGTTGTTTTACTGTTATGCTTCTTGTGTGCGGTGTTGAAATTTCTGCTTGTGAAAGAGTATTCTTCTGATACGTATGGTTATATGTACTAGGAAATTCAATATTTGGGATTTTTTATCTTCGATTTTATCTTCAATTTTTTATATTACGCTTTGACGTCAGGAACCGATCGCGTTCCGGAGTCCCAGTCCTTCTACAGTCGAAGGCGCCCTACGAATAAAAGGAAGAGCGTTGAGATAGCAGTTCCACCATTTATTTTCTCTACCGCATCGAAAATCCAAACTGGGTATGAAGCTCTTTGCACTTTTCCCCATATTTGAGACAAAATCTCCTCTCGCAATTAAATCTCTTATGTGCTTAGTGGATTCAACCAGAGGGATTTAATTGTGGGTTTACAATGCCTAATGATGGTGTTACGATGCTATTGGGAATCCGATGGTTGTTAAGTTTCATAGGAGAAAGTTGCCTTCTATCTGCAATAATTATCAACCTGGGCGGCCCCTGCCCTACTTTTTGGAAAAATTAAACGGTTCTCTGGTCCTGTTTTTGGAAATTTTTTAGTGTTCTAACAATTACTGGTCTGGGTTAATCTGGTATTACTCTTACTTTATCTACAATGAGGAAAAATTGCAGCCACCTAAAACCGTGTTTGTCAACTTTTTATTTTTTTGTTTTTTTATTTTTTGTGATAGATTTGTCGAGCCTCAATTGTTTGACTGCCTTAGATATGAAGCTTTATTTTTTGTTACTATTTTATAATTTGATTTGATGGAAAAGTAAACTTAAGATAGTGGGCACGAATGTTGACAGTACTACTACGACATTGTTTTTCTTCTAAACATATGGATTAATGATACAAGAAATATGTCTCCTAATATGAGATCCCACATTGGTTGGAGAGAGCAATGAACTATTTCTTATAAGTGTGTGGAAACCTCTCCCTAGTGGACGCGTTGTAAAACCTTGAGGGGAAACCCAAAAGGGTTCTCAAAGAGGATAATATCTACTTGCGGTGGGTTTAAGCCCTTACATACAAAGAGTTGTTACACCTAATTTCTCATTTACTCTTTATTACTCATTTGTTTGTGAATTGTTCCCTGCTTTTATGCAGGGGTGAAAGAAGAGATGGATACAGTAGCACATCCAAAGCAAGAACCGTTCCTTATAACAAGGTCCGTCTGAAAATAATAGTACTGCCCATTTTCTTTTATCTGTCAATCTAAAATTATGGTACACTTTTATCCTTATCTTTGCTCCTTGCTTGTTTAGGCTTTAATTTGATGCTTATTCTTTATGGTAGCAAAATAGGAGTTCTGACCTTTCTCTCAAAAATGTGATGTTATCTGTACTTATCTGTACCACAATTAATGAGCTCTGTTCCTGATTAATTGGTCCCATTGTATGAATGTTAGGTTAACCCTAGTCATGGCTTAGGCAATATTTCACCAACTTCTATTTATCTATATCCACGGGATATTTAACTAGCTAGATAGAGGCTGACTTTTTTTTTTTTTTTTTTTCTACTTCTTAAAGAATAGTAAATACTTGTTATGAAACAAGAGTCCCTTTCAGTAGCTTAACTGTTAAGATCACCGCATCTCCTTCTCTTTCACTTTGGCCAATATGAGTTTACCTATGGTATGGTAATTGACTAATTGTACAGAGAAAAGTTTCTCTTGTTTACCACTGGCCAATAACTGTTTGTTAGCAGTCGGCTACTGGAAGTTTGAAATCATTACCTCAACAAAATTATCTAATGATGAGTAGCTATTATTTTTTTTCAGAGGCAGTGTGCCATAATGTATGGGGAAGATGAGTCCAATGTTGAGCTTCCACGGGAATTTGTTGAACAGAAGAAGGCATATTTTTCAGAAGTAGATGCGTTTGAACTACCAGAGGAGGCTAAATCATCCGACTCGGAGTAGACGACGGTTTTTTATAGTTATAACCATTCAAGTTAGTAGTCTGTATTGTTTAAGTTCTTGTTCATTACTCATAGAAACGGTTTGCTCTGTTCTGTCATTCATTTAATATACAGTGTAATTTTGGAAGCATGAAACTAACGCCATAAAGTTTTATCAATAGTTTTGTCAAGTCTAAAAATTAATCAATAATAGC
mRNA sequence
ATATATATTTTAAAGGTAGAAATGAATTATTAGATTTTTTGAAATTCATACAAAGTTAATAGTGAGGCCCAGGCTTTGGACAAAATGGTTAAGCCCAAAACGTACGTTAAGGCCCATAATATTGGCCCATCGGATGACGAACATAAGATTCCTCTCAGGCCAGAAGGCAGAAGCGCTAAGTTCATTTCGCGCCCGACTACACTCACCCTCGCAATTCTTCTCGTCCAACTTTCAATTTCAATAGCATTTTCCCGCCACTGTCACTTCGATCTTCCTCCGCTCAAGTTCTTCAGCGCATCTTCTTCACCATGAAGATTATTGAACACTTCCTTCTCCCCCTGTGAAATGTGAAGGACTAGAGATGGAATCCCAGAAACAAAATCTCAGTGCTCGAAAACCCTTCTCGGATTGTACCAATACCATCATCTCCTCGCAATCGTCGGCTTCCAATTTCTCCGCTCCGATCAAACCGCGCAAGCGTGTAATTAAGTCTGCGGTTAAAGATGTTGTCAACATTCAGAAGAAATGCGAGCCAAGTTTTGCGTCTGAATCTACATCCCTTAATTTGCGAGTTTCGAACCCTAGTTCTGATTTTCTTCCTACAGAACCTAGCTCTGATTTTAATCCTGCAGAAACAAGCCCTACTTCTGATTCTCTTCCTCCAGAACCTAGTTCTCGCCGTCTTCCTACGGAAGCCTCCACTCCTTCGCGGCGTACTGATTTGTCGTCTAGTTCAGGAACCGATCGCGTTCCGGAGTCCCAGTCCTTCTACAGTCGAAGGCGCCCTACGAATAAAAGGAAGAGCGTTGAGATAGCAGTTCCACCATTTATTTTCTCTACCGCATCGAAAATCCAAACTGGGGGTGAAAGAAGAGATGGATACAGTAGCACATCCAAAGCAAGAACCGTTCCTTATAACAAGAGGCAGTGTGCCATAATGTATGGGGAAGATGAGTCCAATGTTGAGCTTCCACGGGAATTTGTTGAACAGAAGAAGGCATATTTTTCAGAAGTAGATGCGTTTGAACTACCAGAGGAGGCTAAATCATCCGACTCGGAGTAGACGACGGTTTTTTATAGTTATAACCATTCAAGTTAGTAGTCTGTATTGTTTAAGTTCTTGTTCATTACTCATAGAAACGGTTTGCTCTGTTCTGTCATTCATTTAATATACAGTGTAATTTTGGAAGCATGAAACTAACGCCATAAAGTTTTATCAATAGTTTTGTCAAGTCTAAAAATTAATCAATAATAGC
Coding sequence (CDS)
ATGGAATCCCAGAAACAAAATCTCAGTGCTCGAAAACCCTTCTCGGATTGTACCAATACCATCATCTCCTCGCAATCGTCGGCTTCCAATTTCTCCGCTCCGATCAAACCGCGCAAGCGTGTAATTAAGTCTGCGGTTAAAGATGTTGTCAACATTCAGAAGAAATGCGAGCCAAGTTTTGCGTCTGAATCTACATCCCTTAATTTGCGAGTTTCGAACCCTAGTTCTGATTTTCTTCCTACAGAACCTAGCTCTGATTTTAATCCTGCAGAAACAAGCCCTACTTCTGATTCTCTTCCTCCAGAACCTAGTTCTCGCCGTCTTCCTACGGAAGCCTCCACTCCTTCGCGGCGTACTGATTTGTCGTCTAGTTCAGGAACCGATCGCGTTCCGGAGTCCCAGTCCTTCTACAGTCGAAGGCGCCCTACGAATAAAAGGAAGAGCGTTGAGATAGCAGTTCCACCATTTATTTTCTCTACCGCATCGAAAATCCAAACTGGGGGTGAAAGAAGAGATGGATACAGTAGCACATCCAAAGCAAGAACCGTTCCTTATAACAAGAGGCAGTGTGCCATAATGTATGGGGAAGATGAGTCCAATGTTGAGCTTCCACGGGAATTTGTTGAACAGAAGAAGGCATATTTTTCAGAAGTAGATGCGTTTGAACTACCAGAGGAGGCTAAATCATCCGACTCGGAGTAG
Protein sequence
MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSFASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTDLSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKARTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEEAKSSDSE
Homology
BLAST of Cp4.1LG13g07400 vs. NCBI nr
Match:
XP_023551283.1 (uncharacterized protein LOC111809149 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 437 bits (1123), Expect = 5.32e-154
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
Query: 1 MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF
Sbjct: 1 MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
Query: 61 ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120
ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD
Sbjct: 61 ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120
Query: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA
Sbjct: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
Query: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEEAKSSDSE 233
RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEEAKSSDSE
Sbjct: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEEAKSSDSE 233
BLAST of Cp4.1LG13g07400 vs. NCBI nr
Match:
KAG6578470.1 (hypothetical protein SDJN03_22918, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 419 bits (1077), Expect = 5.66e-147
Identity = 227/234 (97.01%), Postives = 229/234 (97.86%), Query Frame = 0
Query: 1 MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
MESQ QNLSARKPFSDCTNTI+SSQSS SNFSAPIKPRKRVIKSAVKDVVNIQKK EPSF
Sbjct: 1 MESQIQNLSARKPFSDCTNTIVSSQSSPSNFSAPIKPRKRVIKSAVKDVVNIQKKREPSF 60
Query: 61 ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120
ASESTSLNLRVSNPSSDFLPTEPSSDFNPAET+PTSDSLPPEPSSRRLPTEASTPSRRTD
Sbjct: 61 ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETNPTSDSLPPEPSSRRLPTEASTPSRRTD 120
Query: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
LSSSSGTDRVPE QSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA
Sbjct: 121 LSSSSGTDRVPEPQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
Query: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEE-AKSSDSE 233
RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEE AKSSDSE
Sbjct: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEEEAKSSDSE 234
BLAST of Cp4.1LG13g07400 vs. NCBI nr
Match:
XP_022939234.1 (uncharacterized protein LOC111445210 [Cucurbita moschata])
HSP 1 Score: 407 bits (1046), Expect = 3.00e-142
Identity = 221/234 (94.44%), Postives = 224/234 (95.73%), Query Frame = 0
Query: 1 MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
MESQ QNLSARKPFSDCTNTI+SSQ S SNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF
Sbjct: 1 MESQIQNLSARKPFSDCTNTIVSSQLSPSNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
Query: 61 ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120
ASESTS NLRVSNPSS FLPTEPSSDFNPAET+PTSDSL PEPSSRRLPTEASTP RRTD
Sbjct: 61 ASESTSFNLRVSNPSSGFLPTEPSSDFNPAETNPTSDSLLPEPSSRRLPTEASTPLRRTD 120
Query: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
LSSSSGTDRVPE QSFYSRRRP+NKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA
Sbjct: 121 LSSSSGTDRVPEPQSFYSRRRPSNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
Query: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEE-AKSSDSE 233
RTVPYNKRQCAI YGEDESNVELPREFVEQKKAYFSEVDAFELPEE AKSSDSE
Sbjct: 181 RTVPYNKRQCAITYGEDESNVELPREFVEQKKAYFSEVDAFELPEEEAKSSDSE 234
BLAST of Cp4.1LG13g07400 vs. NCBI nr
Match:
XP_022993386.1 (uncharacterized protein LOC111489423 [Cucurbita maxima])
HSP 1 Score: 397 bits (1021), Expect = 1.93e-138
Identity = 217/234 (92.74%), Postives = 222/234 (94.87%), Query Frame = 0
Query: 1 MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
MESQKQNLSARKPFSDCTNTI+SSQSSASNFSAPIKP KRVIKSAV+D VNIQKK EPSF
Sbjct: 1 MESQKQNLSARKPFSDCTNTIVSSQSSASNFSAPIKPCKRVIKSAVEDDVNIQKKGEPSF 60
Query: 61 ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120
SESTSLNLRVSNPSSD LPTEP SDFNP ET+PTSDSLPPEPSSRRLPTEASTPSRRTD
Sbjct: 61 PSESTSLNLRVSNPSSDSLPTEPISDFNPVETNPTSDSLPPEPSSRRLPTEASTPSRRTD 120
Query: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
LSS SGTDRVPE QSFYSRR PTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA
Sbjct: 121 LSSRSGTDRVPEPQSFYSRRCPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
Query: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEE-AKSSDSE 233
RTVPY+KRQCAI+YGEDESNVELPREFVE KKAYFSEVDAFELPEE AKSSDSE
Sbjct: 181 RTVPYSKRQCAIIYGEDESNVELPREFVEHKKAYFSEVDAFELPEEEAKSSDSE 234
BLAST of Cp4.1LG13g07400 vs. NCBI nr
Match:
KAG7016036.1 (Peroxidase 52 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 364 bits (934), Expect = 1.28e-122
Identity = 206/234 (88.03%), Postives = 208/234 (88.89%), Query Frame = 0
Query: 1 MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
MESQ QNLSARKPFSDCTNTI+SSQSS SNFSAPIKPRKRVIKSAVKDVVNIQKK EPSF
Sbjct: 1 MESQIQNLSARKPFSDCTNTIVSSQSSPSNFSAPIKPRKRVIKSAVKDVVNIQKKREPSF 60
Query: 61 ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120
ASESTSLNLRVSNPSSDFLPTEPSSDFNPAET+PTSDSLPPEPSSRRLPTEASTPSRRTD
Sbjct: 61 ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETNPTSDSLPPEPSSRRLPTEASTPSRRTD 120
Query: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
LSSSSGTDRVPE QSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTG
Sbjct: 121 LSSSSGTDRVPEPQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTG------------- 180
Query: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEE-AKSSDSE 233
QCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEE AKSSDSE
Sbjct: 181 --------QCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEEEAKSSDSE 213
BLAST of Cp4.1LG13g07400 vs. ExPASy TrEMBL
Match:
A0A6J1FGK1 (uncharacterized protein LOC111445210 OS=Cucurbita moschata OX=3662 GN=LOC111445210 PE=4 SV=1)
HSP 1 Score: 407 bits (1046), Expect = 1.45e-142
Identity = 221/234 (94.44%), Postives = 224/234 (95.73%), Query Frame = 0
Query: 1 MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
MESQ QNLSARKPFSDCTNTI+SSQ S SNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF
Sbjct: 1 MESQIQNLSARKPFSDCTNTIVSSQLSPSNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
Query: 61 ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120
ASESTS NLRVSNPSS FLPTEPSSDFNPAET+PTSDSL PEPSSRRLPTEASTP RRTD
Sbjct: 61 ASESTSFNLRVSNPSSGFLPTEPSSDFNPAETNPTSDSLLPEPSSRRLPTEASTPLRRTD 120
Query: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
LSSSSGTDRVPE QSFYSRRRP+NKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA
Sbjct: 121 LSSSSGTDRVPEPQSFYSRRRPSNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
Query: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEE-AKSSDSE 233
RTVPYNKRQCAI YGEDESNVELPREFVEQKKAYFSEVDAFELPEE AKSSDSE
Sbjct: 181 RTVPYNKRQCAITYGEDESNVELPREFVEQKKAYFSEVDAFELPEEEAKSSDSE 234
BLAST of Cp4.1LG13g07400 vs. ExPASy TrEMBL
Match:
A0A6J1JW66 (uncharacterized protein LOC111489423 OS=Cucurbita maxima OX=3661 GN=LOC111489423 PE=4 SV=1)
HSP 1 Score: 397 bits (1021), Expect = 9.37e-139
Identity = 217/234 (92.74%), Postives = 222/234 (94.87%), Query Frame = 0
Query: 1 MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
MESQKQNLSARKPFSDCTNTI+SSQSSASNFSAPIKP KRVIKSAV+D VNIQKK EPSF
Sbjct: 1 MESQKQNLSARKPFSDCTNTIVSSQSSASNFSAPIKPCKRVIKSAVEDDVNIQKKGEPSF 60
Query: 61 ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120
SESTSLNLRVSNPSSD LPTEP SDFNP ET+PTSDSLPPEPSSRRLPTEASTPSRRTD
Sbjct: 61 PSESTSLNLRVSNPSSDSLPTEPISDFNPVETNPTSDSLPPEPSSRRLPTEASTPSRRTD 120
Query: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
LSS SGTDRVPE QSFYSRR PTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA
Sbjct: 121 LSSRSGTDRVPEPQSFYSRRCPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
Query: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELPEE-AKSSDSE 233
RTVPY+KRQCAI+YGEDESNVELPREFVE KKAYFSEVDAFELPEE AKSSDSE
Sbjct: 181 RTVPYSKRQCAIIYGEDESNVELPREFVEHKKAYFSEVDAFELPEEEAKSSDSE 234
BLAST of Cp4.1LG13g07400 vs. ExPASy TrEMBL
Match:
A0A6J1JRU8 (uncharacterized protein LOC111487776 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487776 PE=4 SV=1)
HSP 1 Score: 307 bits (787), Expect = 3.97e-103
Identity = 171/234 (73.08%), Postives = 192/234 (82.05%), Query Frame = 0
Query: 1 MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
MESQK+NL RKP +DCTNT++SSQSSASN SA IKPRKRV+K AVKDVVN +K+ SF
Sbjct: 1 MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKPAVKDVVNNEKEGVSSF 60
Query: 61 ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120
AS STS+NL+ SNPSSDFLPT+PSS+ PAE++PTSDSLP EPSS LP E STPSR D
Sbjct: 61 ASASTSVNLQASNPSSDFLPTQPSSNLPPAESTPTSDSLPTEPSSSSLPAEVSTPSRLVD 120
Query: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
L SSSGTDRVPE QSFYSRR P N+RKS E A PF+FSTASKI T GE+R SS S+A
Sbjct: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFVFSTASKILTRGEKRAADSSPSRA 180
Query: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFEL-PEEAKSSDSE 233
RTVPY KRQ +YGEDES +ELPREFVE++KAYFSEVDAFEL EEAKSSDSE
Sbjct: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234
BLAST of Cp4.1LG13g07400 vs. ExPASy TrEMBL
Match:
A0A6J1GKJ2 (uncharacterized protein LOC111455207 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455207 PE=4 SV=1)
HSP 1 Score: 301 bits (771), Expect = 1.08e-100
Identity = 168/234 (71.79%), Postives = 192/234 (82.05%), Query Frame = 0
Query: 1 MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
MESQK+NL RKP +DCTNT++SSQSSASN SA IKPRKRV+KSAVKDVVN +K+ S
Sbjct: 1 MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60
Query: 61 ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120
AS STS+NL+ SNPSS+FLPT+PSS+ PAE++P+SDSLP EPSS +P E STPSR D
Sbjct: 61 ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD 120
Query: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
L SSSGTDRVPE QSFYSRR P N+RKS E A PFIFSTASKI + GE+R SS S+A
Sbjct: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRA 180
Query: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFEL-PEEAKSSDSE 233
RTVPY KRQ +YGEDES +ELPREFVE++KAYFSEVDAFEL EEAKSSDSE
Sbjct: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234
BLAST of Cp4.1LG13g07400 vs. ExPASy TrEMBL
Match:
A0A6J1JPQ1 (cell wall protein RBR3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487776 PE=4 SV=1)
HSP 1 Score: 298 bits (764), Expect = 1.17e-99
Identity = 169/234 (72.22%), Postives = 190/234 (81.20%), Query Frame = 0
Query: 1 MESQKQNLSARKPFSDCTNTIISSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSF 60
MESQK+NL RKP +DCTNT++SSQSSASN SA IKPRKRV+K AVKDVVN +K+ SF
Sbjct: 1 MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKPAVKDVVNNEKEGVSSF 60
Query: 61 ASESTSLNLRVSNPSSDFLPTEPSSDFNPAETSPTSDSLPPEPSSRRLPTEASTPSRRTD 120
AS STS+NL+ SNPSSDFLPT+PSS+ PAE++PTSDSLP EPSS LP E STPSR D
Sbjct: 61 ASASTSVNLQASNPSSDFLPTQPSSNLPPAESTPTSDSLPTEPSSSSLPAEVSTPSRLVD 120
Query: 121 LSSSSGTDRVPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKA 180
L SSS DRVPE QSFYSRR P N+RKS E A PF+FSTASKI T GE+R SS S+A
Sbjct: 121 LPSSS--DRVPEPQSFYSRRHPANRRKSTETAAAPFVFSTASKILTRGEKRAADSSPSRA 180
Query: 181 RTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFEL-PEEAKSSDSE 233
RTVPY KRQ +YGEDES +ELPREFVE++KAYFSEVDAFEL EEAKSSDSE
Sbjct: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 232
BLAST of Cp4.1LG13g07400 vs. TAIR 10
Match:
AT3G56250.1 (unknown protein; Has 109 Blast hits to 83 proteins in 41 species: Archae - 0; Bacteria - 6; Metazoa - 18; Fungi - 20; Plants - 21; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). )
HSP 1 Score: 49.3 bits (116), Expect = 4.9e-06
Identity = 73/241 (30.29%), Postives = 114/241 (47.30%), Query Frame = 0
Query: 11 RKPFSDCTNTII-SSQSSASNFSAPIKPRKRVIKSAVKDVVNIQKKCEPSFASESTSLNL 70
RKP +DCTNT+ SSQ S+S+ +K + S++K +V E T+L
Sbjct: 13 RKPLADCTNTVSRSSQQSSSS----VKFANPSLTSSLKRLV------------EQTTLK- 72
Query: 71 RVSNPSSDFLPTEPSSDFNPAETSPTSDSLP----PEPSSRR----LPTEASTPSR-RTD 130
E D N + T+P S P P +RR L + AS PSR +T
Sbjct: 73 ------------EKPKDVNTSATAPEIASRPITTDVRPVTRRMSADLASPASAPSRPQTS 132
Query: 131 LSSSSGTDR-VPESQSFYSRRRPTNKRKSVEIAVPPFIFSTASKIQ------TGGERRDG 190
S +D+ E S Y+ RR + +K + A S A++I+ +G + R
Sbjct: 133 RSDMGVSDKDFTEPWSVYTVRRKASGQKRSKDASSS--TSAAARIRLDLSSSSGKKTRQA 192
Query: 191 YSSTSKARTVPYNKRQCAIMYGEDESNVELPREFVEQKKAYFSEVDAFELP-EEAKSSDS 234
+ K V KRQ + +++ ++++E++KAYF+E+DAFELP EE +SDS
Sbjct: 193 SENKKKTLKVAPKKRQRTVKQEKEDPVSAACQDYIEKQKAYFAEIDAFELPVEEVSNSDS 222
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023551283.1 | 5.32e-154 | 100.00 | uncharacterized protein LOC111809149 [Cucurbita pepo subsp. pepo] | [more] |
KAG6578470.1 | 5.66e-147 | 97.01 | hypothetical protein SDJN03_22918, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022939234.1 | 3.00e-142 | 94.44 | uncharacterized protein LOC111445210 [Cucurbita moschata] | [more] |
XP_022993386.1 | 1.93e-138 | 92.74 | uncharacterized protein LOC111489423 [Cucurbita maxima] | [more] |
KAG7016036.1 | 1.28e-122 | 88.03 | Peroxidase 52 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FGK1 | 1.45e-142 | 94.44 | uncharacterized protein LOC111445210 OS=Cucurbita moschata OX=3662 GN=LOC1114452... | [more] |
A0A6J1JW66 | 9.37e-139 | 92.74 | uncharacterized protein LOC111489423 OS=Cucurbita maxima OX=3661 GN=LOC111489423... | [more] |
A0A6J1JRU8 | 3.97e-103 | 73.08 | uncharacterized protein LOC111487776 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1GKJ2 | 1.08e-100 | 71.79 | uncharacterized protein LOC111455207 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1JPQ1 | 1.17e-99 | 72.22 | cell wall protein RBR3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114877... | [more] |
Match Name | E-value | Identity | Description | |
AT3G56250.1 | 4.9e-06 | 30.29 | unknown protein; Has 109 Blast hits to 83 proteins in 41 species: Archae - 0; Ba... | [more] |