Cp4.1LG12g09670 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g09670
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Golgin family A protein
Location	Cp4.1LG12: 5486550 .. 5487293 (-)
RNA-Seq Expression	Cp4.1LG12g09670
Synteny	Cp4.1LG12g09670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCTGTGTTTGCAGGCAAAGGCGTTGCCGGTGTGTGCGTGGAGAAGCGATGGGGATGGGATAAGAAACAGGGCACCTCCCACCCCTAACCCTATTCCACCCAGAGACCGCGTCATAGGGTTCGGGCGCCACAAGGGCAAGATGCTGGGAGCCCTGACTTCATCCTATCTCAAATGGATCTCCAAAAATCTCAGAGCTAGGGACACGGAAGAGTGGGCCATTTTGGCAGACCAGGTTCTGGAGGACCCGGTTTACCAAGACCGCATCCAGTGGGAGTTCGCCCACAGCCTTATGAGCGGCGGGGATGGGAGAAGGGGAACTGGCCGCGACGGCGTCGTTTCTGAGCTGTTGGAGATCAGCGACCGGTTTGGCTGGGATTGGGACGGTGGCGCCCACGACGGCGGTTGGAGAGACGTTAACTTCGAGCTCTTGGGGACCTCTAAAGGTGGAAGAATCCCACGGCGAGGCGAACCGATGACGCAGAAGGTGTCGCCGGGCGGAGGCGGAGGAAGTGGCGGCGGCGGTGGCGGAAGAAGGAGCGAGAGAAGAGATCGGCTGAGAGTGAAGCGAGAGAAATCGAAGGGAGTGGCGGAGAGAAGTGAAATGAAAGCGGAGAACAATCCTCTTCCCACTCCCAAAGCTCAACCGGACAATCCGGTTACCGGGATGAACCGTCGCTTCCCTGGTCGTGAAACTCTGCTAAACCGGTTTACCACAGCCAAATCACATTTATTGGATTAA

mRNA sequence

ATGAGTCTGTGTTTGCAGGCAAAGGCGTTGCCGGTGTGTGCGTGGAGAAGCGATGGGGATGGGATAAGAAACAGGGCACCTCCCACCCCTAACCCTATTCCACCCAGAGACCGCGTCATAGGGTTCGGGCGCCACAAGGGCAAGATGCTGGGAGCCCTGACTTCATCCTATCTCAAATGGATCTCCAAAAATCTCAGAGCTAGGGACACGGAAGAGTGGGCCATTTTGGCAGACCAGGTTCTGGAGGACCCGGTTTACCAAGACCGCATCCAGTGGGAGTTCGCCCACAGCCTTATGAGCGGCGGGGATGGGAGAAGGGGAACTGGCCGCGACGGCGTCGTTTCTGAGCTGTTGGAGATCAGCGACCGGTTTGGCTGGGATTGGGACGGTGGCGCCCACGACGGCGGTTGGAGAGACGTTAACTTCGAGCTCTTGGGGACCTCTAAAGGTGGAAGAATCCCACGGCGAGGCGAACCGATGACGCAGAAGGTGTCGCCGGGCGGAGGCGGAGGAAGTGGCGGCGGCGGTGGCGGAAGAAGGAGCGAGAGAAGAGATCGGCTGAGAGTGAAGCGAGAGAAATCGAAGGGAGTGGCGGAGAGAAGTGAAATGAAAGCGGAGAACAATCCTCTTCCCACTCCCAAAGCTCAACCGGACAATCCGGTTACCGGGATGAACCGTCGCTTCCCTGGTCGTGAAACTCTGCTAAACCGGTTTACCACAGCCAAATCACATTTATTGGATTAA

Coding sequence (CDS)

ATGAGTCTGTGTTTGCAGGCAAAGGCGTTGCCGGTGTGTGCGTGGAGAAGCGATGGGGATGGGATAAGAAACAGGGCACCTCCCACCCCTAACCCTATTCCACCCAGAGACCGCGTCATAGGGTTCGGGCGCCACAAGGGCAAGATGCTGGGAGCCCTGACTTCATCCTATCTCAAATGGATCTCCAAAAATCTCAGAGCTAGGGACACGGAAGAGTGGGCCATTTTGGCAGACCAGGTTCTGGAGGACCCGGTTTACCAAGACCGCATCCAGTGGGAGTTCGCCCACAGCCTTATGAGCGGCGGGGATGGGAGAAGGGGAACTGGCCGCGACGGCGTCGTTTCTGAGCTGTTGGAGATCAGCGACCGGTTTGGCTGGGATTGGGACGGTGGCGCCCACGACGGCGGTTGGAGAGACGTTAACTTCGAGCTCTTGGGGACCTCTAAAGGTGGAAGAATCCCACGGCGAGGCGAACCGATGACGCAGAAGGTGTCGCCGGGCGGAGGCGGAGGAAGTGGCGGCGGCGGTGGCGGAAGAAGGAGCGAGAGAAGAGATCGGCTGAGAGTGAAGCGAGAGAAATCGAAGGGAGTGGCGGAGAGAAGTGAAATGAAAGCGGAGAACAATCCTCTTCCCACTCCCAAAGCTCAACCGGACAATCCGGTTACCGGGATGAACCGTCGCTTCCCTGGTCGTGAAACTCTGCTAAACCGGTTTACCACAGCCAAATCACATTTATTGGATTAA

Protein sequence

MSLCLQAKALPVCAWRSDGDGIRNRAPPTPNPIPPRDRVIGFGRHKGKMLGALTSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHSLMSGGDGRRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGEPMTQKVSPGGGGGSGGGGGGRRSERRDRLRVKREKSKGVAERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRETLLNRFTTAKSHLLD

Homology

[Close]

BLAST of Cp4.1LG12g09670 vs. NCBI nr
Match: XP_023548140.1 (uncharacterized protein LOC111806868 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 502 bits (1293), Expect = 1.89e-179
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MSLCLQAKALPVCAWRSDGDGIRNRAPPTPNPIPPRDRVIGFGRHKGKMLGALTSSYLKW 60
           MSLCLQAKALPVCAWRSDGDGIRNRAPPTPNPIPPRDRVIGFGRHKGKMLGALTSSYLKW
Sbjct: 1   MSLCLQAKALPVCAWRSDGDGIRNRAPPTPNPIPPRDRVIGFGRHKGKMLGALTSSYLKW 60

Query: 61  ISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHSLMSGGDGRRGTGRDGVVSELLEI 120
           ISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHSLMSGGDGRRGTGRDGVVSELLEI
Sbjct: 61  ISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHSLMSGGDGRRGTGRDGVVSELLEI 120

Query: 121 SDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGEPMTQKVSPGGGGGSGGGGGGRR 180
           SDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGEPMTQKVSPGGGGGSGGGGGGRR
Sbjct: 121 SDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGEPMTQKVSPGGGGGSGGGGGGRR 180

Query: 181 SERRDRLRVKREKSKGVAERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRETLLNRFTT 240
           SERRDRLRVKREKSKGVAERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRETLLNRFTT
Sbjct: 181 SERRDRLRVKREKSKGVAERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRETLLNRFTT 240

Query: 241 AKSHLLD 247
           AKSHLLD
Sbjct: 241 AKSHLLD 247

[Close]

BLAST of Cp4.1LG12g09670 vs. NCBI nr
Match: KAG7013932.1 (hypothetical protein SDJN02_24101, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 471 bits (1212), Expect = 4.22e-167
Identity = 235/249 (94.38%), Postives = 241/249 (96.79%), Query Frame = 0


Query: 1   MSLCLQAKALPVCAWRSDGDGIRNRAPPTPNPIPPRDRVIGFGRHKGKMLGALTSSYLKW 60
           MSLCLQAKALPVCAWRSDG   RNRAPP+PNPIPPRDRVIGFGRHKGKMLGAL SSYLKW
Sbjct: 1   MSLCLQAKALPVCAWRSDGT--RNRAPPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKW 60

Query: 61  ISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHSLMSGGDGRRGTGRDGVVSELLEI 120
           ISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAH+L+SGGDGRRGTGRDGVVSELLEI
Sbjct: 61  ISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGGDGRRGTGRDGVVSELLEI 120

Query: 121 SDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGEPMTQKVSPGGGGG--SGGGGGG 180
           SDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRG+P  QKVSPGGGGG  SGGGGGG
Sbjct: 121 SDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGGGGGSGGGGGG 180

Query: 181 RRSERRDRLRVKREKSKGVAERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRETLLNRF 240
           RRSERR+RLRVKREKSKGVAERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGR+TLLNRF
Sbjct: 181 RRSERRNRLRVKREKSKGVAERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRF 240

Query: 241 TTAKSHLLD 247
           TTAKSHLLD
Sbjct: 241 TTAKSHLLD 247

[Close]

BLAST of Cp4.1LG12g09670 vs. NCBI nr
Match: KAG6575392.1 (hypothetical protein SDJN03_26031, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 467 bits (1202), Expect = 1.52e-165
Identity = 234/251 (93.23%), Postives = 240/251 (95.62%), Query Frame = 0


Query: 1   MSLCLQAKALPVCAWRSDGDGIRNRAPPTPNPIPPRDRVIGFGRHKGKMLGALTSSYLKW 60
           MSLCLQAKALPVCAWRSDG   RNRAPP+PNPIPPRDRVIGFGRHKGKMLGAL SSYLKW
Sbjct: 1   MSLCLQAKALPVCAWRSDGT--RNRAPPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKW 60

Query: 61  ISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHSLMSGGDGRRGTGRDGVVSELLEI 120
           ISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFA +L+SGGDGRRGTGRDGVVSELLEI
Sbjct: 61  ISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFARNLLSGGDGRRGTGRDGVVSELLEI 120

Query: 121 SDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGEPMTQKVSPGGGGG----SGGGG 180
           SDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRG+P  QKVSPGGGGG    SGGGG
Sbjct: 121 SDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGGGGGGGSGGGG 180

Query: 181 GGRRSERRDRLRVKREKSKGVAERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRETLLN 240
           GGRRSERR+RLRVKREKSKGVAERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGR+TLLN
Sbjct: 181 GGRRSERRNRLRVKREKSKGVAERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRQTLLN 240

Query: 241 RFTTAKSHLLD 247
           RFTTAKSHLLD
Sbjct: 241 RFTTAKSHLLD 249

[Close]

BLAST of Cp4.1LG12g09670 vs. NCBI nr
Match: XP_022953699.1 (uncharacterized protein LOC111456149 [Cucurbita moschata])

HSP 1 Score: 459 bits (1182), Expect = 1.36e-162
Identity = 228/247 (92.31%), Postives = 236/247 (95.55%), Query Frame = 0


Query: 1   MSLCLQAKALPVCAWRSDGDGIRNRAPPTPNPIPPRDRVIGFGRHKGKMLGALTSSYLKW 60
           MSLCLQAKALPVCAWRSDG  IRNRA P+PNPIPPRDRVIGFGRHKGKMLGAL SSYLKW
Sbjct: 1   MSLCLQAKALPVCAWRSDG--IRNRAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKW 60

Query: 61  ISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHSLMSGGDGRRGTGRDGVVSELLEI 120
           ISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAH+L+SGGDGRRGTGRDGVVSELLEI
Sbjct: 61  ISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGGDGRRGTGRDGVVSELLEI 120

Query: 121 SDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGEPMTQKVSPGGGGGSGGGGGGRR 180
           SDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRG+P  QKVSPGGGGGSGGGG  +R
Sbjct: 121 SDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGGGSGGGG--KR 180

Query: 181 SERRDRLRVKREKSKGVAERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRETLLNRFTT 240
           SERRDRLRVKREKSKGV ERSE + ENNPLPTPKAQPDNPVTGMNRRFPGR+TLLNRFTT
Sbjct: 181 SERRDRLRVKREKSKGVVERSETEVENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTT 240

Query: 241 AKSHLLD 247
           AK+HLLD
Sbjct: 241 AKAHLLD 243

[Close]

BLAST of Cp4.1LG12g09670 vs. NCBI nr
Match: XP_022992375.1 (uncharacterized protein LOC111488702 [Cucurbita maxima])

HSP 1 Score: 452 bits (1163), Expect = 9.29e-160
Identity = 227/247 (91.90%), Postives = 231/247 (93.52%), Query Frame = 0


Query: 1   MSLCLQAKALPVCAWRSDGDGIRNRAPPTPNPIPPRDRVIGFGRHKGKMLGALTSSYLKW 60
           MSLCLQAKALPVCAWRSDGDGIRNRAPPTPNPIPPRDRVIGFGRHKGKMLGAL SSYLKW
Sbjct: 1   MSLCLQAKALPVCAWRSDGDGIRNRAPPTPNPIPPRDRVIGFGRHKGKMLGALPSSYLKW 60

Query: 61  ISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHSLMSGGDGRRGTGRDGVVSELLEI 120
           ISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAH+L+SGG GR GT RDGVVSELLEI
Sbjct: 61  ISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGGTGRGGTARDGVVSELLEI 120

Query: 121 SDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGEPMTQKVSPGGGGGSGGGGGGRR 180
           SDRFGWDWDGG    GWRDVNFELLGTSKGGRIPRR EP  QKVSPGGGGG    GGGRR
Sbjct: 121 SDRFGWDWDGG----GWRDVNFELLGTSKGGRIPRRAEPTAQKVSPGGGGG----GGGRR 180

Query: 181 SERRDRLRVKREKSKGVAERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRETLLNRFTT 240
           SERR+RLRVKREKSKGV ERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGR+TLLNRFTT
Sbjct: 181 SERRNRLRVKREKSKGVVERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTT 239

Query: 241 AKSHLLD 247
           AKSHLLD
Sbjct: 241 AKSHLLD 239

[Close]

BLAST of Cp4.1LG12g09670 vs. ExPASy TrEMBL
Match: A0A6J1GQE9 (uncharacterized protein LOC111456149 OS=Cucurbita moschata OX=3662 GN=LOC111456149 PE=4 SV=1)

HSP 1 Score: 459 bits (1182), Expect = 6.61e-163
Identity = 228/247 (92.31%), Postives = 236/247 (95.55%), Query Frame = 0


Query: 1   MSLCLQAKALPVCAWRSDGDGIRNRAPPTPNPIPPRDRVIGFGRHKGKMLGALTSSYLKW 60
           MSLCLQAKALPVCAWRSDG  IRNRA P+PNPIPPRDRVIGFGRHKGKMLGAL SSYLKW
Sbjct: 1   MSLCLQAKALPVCAWRSDG--IRNRAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKW 60

Query: 61  ISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHSLMSGGDGRRGTGRDGVVSELLEI 120
           ISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAH+L+SGGDGRRGTGRDGVVSELLEI
Sbjct: 61  ISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGGDGRRGTGRDGVVSELLEI 120

Query: 121 SDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGEPMTQKVSPGGGGGSGGGGGGRR 180
           SDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRG+P  QKVSPGGGGGSGGGG  +R
Sbjct: 121 SDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGGGSGGGG--KR 180

Query: 181 SERRDRLRVKREKSKGVAERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRETLLNRFTT 240
           SERRDRLRVKREKSKGV ERSE + ENNPLPTPKAQPDNPVTGMNRRFPGR+TLLNRFTT
Sbjct: 181 SERRDRLRVKREKSKGVVERSETEVENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTT 240

Query: 241 AKSHLLD 247
           AK+HLLD
Sbjct: 241 AKAHLLD 243

[Close]

BLAST of Cp4.1LG12g09670 vs. ExPASy TrEMBL
Match: A0A6J1JVI9 (uncharacterized protein LOC111488702 OS=Cucurbita maxima OX=3661 GN=LOC111488702 PE=4 SV=1)

HSP 1 Score: 452 bits (1163), Expect = 4.50e-160
Identity = 227/247 (91.90%), Postives = 231/247 (93.52%), Query Frame = 0


Query: 1   MSLCLQAKALPVCAWRSDGDGIRNRAPPTPNPIPPRDRVIGFGRHKGKMLGALTSSYLKW 60
           MSLCLQAKALPVCAWRSDGDGIRNRAPPTPNPIPPRDRVIGFGRHKGKMLGAL SSYLKW
Sbjct: 1   MSLCLQAKALPVCAWRSDGDGIRNRAPPTPNPIPPRDRVIGFGRHKGKMLGALPSSYLKW 60

Query: 61  ISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHSLMSGGDGRRGTGRDGVVSELLEI 120
           ISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAH+L+SGG GR GT RDGVVSELLEI
Sbjct: 61  ISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGGTGRGGTARDGVVSELLEI 120

Query: 121 SDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGEPMTQKVSPGGGGGSGGGGGGRR 180
           SDRFGWDWDGG    GWRDVNFELLGTSKGGRIPRR EP  QKVSPGGGGG    GGGRR
Sbjct: 121 SDRFGWDWDGG----GWRDVNFELLGTSKGGRIPRRAEPTAQKVSPGGGGG----GGGRR 180

Query: 181 SERRDRLRVKREKSKGVAERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRETLLNRFTT 240
           SERR+RLRVKREKSKGV ERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGR+TLLNRFTT
Sbjct: 181 SERRNRLRVKREKSKGVVERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNRFTT 239

Query: 241 AKSHLLD 247
           AKSHLLD
Sbjct: 241 AKSHLLD 239

[Close]

BLAST of Cp4.1LG12g09670 vs. ExPASy TrEMBL
Match: A0A1S3CGX9 (uncharacterized protein LOC103500617 OS=Cucumis melo OX=3656 GN=LOC103500617 PE=4 SV=1)

HSP 1 Score: 278 bits (710), Expect = 5.31e-91
Identity = 161/248 (64.92%), Postives = 177/248 (71.37%), Query Frame = 0


Query: 2   SLCLQAKA-LPVCAWR--SDGDGIRNRAPPTPNPIPPRDRVIGFGRHKGKMLGALTSSYL 61
           SLCL   A    C WR  S G+ IR+ A    NPIP RDRVIGFG+HKGKMLG L S+YL
Sbjct: 10  SLCLPGNASAAACVWRRRSRGNTIRSEAEGQ-NPIPGRDRVIGFGKHKGKMLGTLPSTYL 69

Query: 62  KWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHSLMSGGDGRRGTGRDGVVSELL 121
           KWISKNLRAR+ EEWAILADQVLEDPVYQDR+QWEFAH++++G  GR  +GRD VVSEL 
Sbjct: 70  KWISKNLRAREFEEWAILADQVLEDPVYQDRVQWEFAHNVLTGA-GR--SGRDDVVSELS 129

Query: 122 EISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGEPMTQKVSPGGGGGSGGGGGG 181
           EISDRFGWDWD   +  GWRDV+FELLGTSKGGRIPRR EP            SGGGGGG
Sbjct: 130 EISDRFGWDWD---NKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVSGGGGGG 189

Query: 182 RRSERRDRLRVKREKSKGVAERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRETLLNRF 241
           RR ERRDRLR KREKSKG  E+SE K EN          +NPV   N  FPGR+ LL R 
Sbjct: 190 RRRERRDRLREKREKSKGGGEKSEGKTEN----------ENPVPRFNNPFPGRQALLKRV 240

Query: 242 TTAKSHLL 246
           TT KS LL
Sbjct: 250 TTIKSDLL 240

[Close]

BLAST of Cp4.1LG12g09670 vs. ExPASy TrEMBL
Match: A0A5D3BWA7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001890 PE=4 SV=1)

HSP 1 Score: 275 bits (704), Expect = 4.32e-90
Identity = 160/248 (64.52%), Postives = 176/248 (70.97%), Query Frame = 0


Query: 2   SLCLQAKA-LPVCAWR--SDGDGIRNRAPPTPNPIPPRDRVIGFGRHKGKMLGALTSSYL 61
           SLCL   A    C WR  S G+ IR+ A    NPIP RDRVIGFG+HKGKMLG L S+YL
Sbjct: 10  SLCLPGNASAAACVWRRRSRGNTIRSEAEGQ-NPIPGRDRVIGFGKHKGKMLGTLPSTYL 69

Query: 62  KWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHSLMSGGDGRRGTGRDGVVSELL 121
           KWISKNLRAR+ EEWA LADQVLEDPVYQDR+QWEFAH++++G  GR  +GRD VVSEL 
Sbjct: 70  KWISKNLRAREFEEWASLADQVLEDPVYQDRVQWEFAHNVLTGA-GR--SGRDDVVSELS 129

Query: 122 EISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGEPMTQKVSPGGGGGSGGGGGG 181
           EISDRFGWDWD   +  GWRDV+FELLGTSKGGRIPRR EP            SGGGGGG
Sbjct: 130 EISDRFGWDWD---NKSGWRDVDFELLGTSKGGRIPRRIEPTQNSEWKTARNVSGGGGGG 189

Query: 182 RRSERRDRLRVKREKSKGVAERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRETLLNRF 241
           RR ERRDRLR KREKSKG  E+SE K EN          +NPV   N  FPGR+ LL R 
Sbjct: 190 RRRERRDRLREKREKSKGGGEKSEGKTEN----------ENPVPRFNNPFPGRQALLKRV 240

Query: 242 TTAKSHLL 246
           TT KS LL
Sbjct: 250 TTIKSDLL 240

[Close]

BLAST of Cp4.1LG12g09670 vs. ExPASy TrEMBL
Match: A0A0A0K7H6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447750 PE=4 SV=1)

HSP 1 Score: 265 bits (678), Expect = 6.48e-86
Identity = 157/255 (61.57%), Postives = 174/255 (68.24%), Query Frame = 0


Query: 2   SLCLQAKALPVCAWR---SDGDGIRNRAPPTPNPIPPRDRVIGFGRHKGKMLGALTSSYL 61
           SLCL   AL     R   S G  IR+ A    NP+P RDRVIGFG+HKGKMLG L S+YL
Sbjct: 24  SLCLPGNALAAACVRRRRSQGITIRSEAEGK-NPVPGRDRVIGFGKHKGKMLGTLPSTYL 83

Query: 62  KWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFAHSLMSGGDGRRGTGRDGVVSELL 121
           KWISKNLRAR+ EEWAILADQVLEDP+YQDR+QWEFAH++++G  GR  +GRD VVSEL 
Sbjct: 84  KWISKNLRAREFEEWAILADQVLEDPIYQDRVQWEFAHNVLTGA-GR--SGRDNVVSELS 143

Query: 122 EISDRFGWDWDGGAHDGGWRDVNFELLGTSKGGRIPRRGEPM-------TQKVSPGGGGG 181
           EISDRFGWDWD   +  GWR V+FELLGTSKGGRIPRR EP         Q VS     G
Sbjct: 144 EISDRFGWDWD---NKSGWRGVDFELLGTSKGGRIPRRIEPTQKSESKTAQNVS-----G 203

Query: 182 SGGGGGGRRSERRDRLRVKREKSKGVAERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGR 241
            GGGGGGRR ERRDRLR KREKS G  E+SE K E           +NPV   N  FPGR
Sbjct: 204 GGGGGGGRRRERRDRLREKREKSTGGGEKSERKTEI----------ENPVPRFNNPFPGR 256

Query: 242 ETLLNRFTTAKSHLL 246
           + LL R  T KS LL
Sbjct: 264 QALLKRVATIKSDLL 256

[Close]

BLAST of Cp4.1LG12g09670 vs. TAIR 10
Match: AT1G51080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; Has 101 Blast hits to 98 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 10; Plants - 27; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 147.1 bits (370), Expect = 1.8e-35
Identity = 100/221 (45.25%), Postives = 123/221 (55.66%), Query Frame = 0


Query: 36  RDRVIGFGRHKGKMLGALTSSYLKWISKNLRARDTEEWAILADQVLEDPVYQDRIQWEFA 95
           RD +I FG+HKGKMLG L SSYLKW+SKNLRA   E WA LAD+VLED VY+DR +WEFA
Sbjct: 64  RDTIIDFGKHKGKMLGTLPSSYLKWVSKNLRAGVFEYWAKLADEVLEDDVYKDRTEWEFA 123

Query: 96  HSLMSGGDG--------RRGTGRDGVVSELLEISDRFGWDWDGGAHDGGWRDVNFELLGT 155
             ++ G D         R+       VS LLEIS+RFGWD +      GW  +NFELLGT
Sbjct: 124 EKILHGSDESMRALTSVRKSREEVNSVSMLLEISERFGWDNEDKI---GWSKINFELLGT 183

Query: 156 SKGGRIPR----------RGEPMTQKVSPGGGGGSGGGGGGRRSERRDRLRVKREKSKG- 215
           SKGGRIPR          RGE M ++             G RR +RR+R+R    +  G 
Sbjct: 184 SKGGRIPRLRKANEEEEERGE-MVRRREIKKKEEEEDENGWRRKQRRERMRQSLGRDDGK 243

Query: 216 VAERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRETLLNR 238
              RSE K     L   + Q +  +      FPGRE+LL +
Sbjct: 244 TVNRSEQKGVLGKLEDVEKQLEPKI---QSPFPGRESLLKK 277

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g09670 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG12g09670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023548140.1	1.89e-179	100.00	uncharacterized protein LOC111806868 [Cucurbita pepo subsp. pepo]	[more]
KAG7013932.1	4.22e-167	94.38	hypothetical protein SDJN02_24101, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6575392.1	1.52e-165	93.23	hypothetical protein SDJN03_26031, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022953699.1	1.36e-162	92.31	uncharacterized protein LOC111456149 [Cucurbita moschata]	[more]
XP_022992375.1	9.29e-160	91.90	uncharacterized protein LOC111488702 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG12g09670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GQE9	6.61e-163	92.31	uncharacterized protein LOC111456149 OS=Cucurbita moschata OX=3662 GN=LOC1114561...	[more]
A0A6J1JVI9	4.50e-160	91.90	uncharacterized protein LOC111488702 OS=Cucurbita maxima OX=3661 GN=LOC111488702...	[more]
A0A1S3CGX9	5.31e-91	64.92	uncharacterized protein LOC103500617 OS=Cucumis melo OX=3656 GN=LOC103500617 PE=...	[more]
A0A5D3BWA7	4.32e-90	64.52	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0K7H6	6.48e-86	61.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447750 PE=4 SV=1	[more]

BLAST of Cp4.1LG12g09670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G51080.1	1.8e-35	45.25	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..247
None	No IPR available	PANTHER	PTHR38357	EXPRESSED PROTEIN	coord: 24..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g09670.1	Cp4.1LG12g09670.1	mRNA