Cp4.1LG12g08370 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g08370
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	cytochrome c oxidase assembly protein COX19-like
Location	Cp4.1LG12: 6461385 .. 6465169 (+)
RNA-Seq Expression	Cp4.1LG12g08370
Synteny	Cp4.1LG12g08370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGGCCTTGCAAAAGCTCCGGTGTCGGCCCAGTTATTTATCTGGGCCAAATTAGCAAATTGGGACTGGGCTGGACTTTTTCAGTTGGGCTTTGCCAAATCCCCGGCGTTGGCCCAGGTATTAATCTGGGCCGAATTCGCAAATTGTGGAATTGGCCTGGACTTTTTCATGTCATGCAGCTACAGAATTTCGTCTCTGATTCTTTTCCGGCTGGCTTCAGAGTAGTTTATCTCGATCCACTAGCATATCACCGGCGACGGTCAATCGATCTTGTTCGCGACTTGGCGGTCCGTATGATTCAAATGAAAATTTCTATATCGAGATTTCAGGAATTTCCACAATGAGTGCAGGTACTCTACGAATCCCGATGGTTACAAACATAAGCATGTTTTCCTTTTTCTTTTCTTTTCTTTTTTGGTTGAACTTATGTTAATTGCGAGGAGAGGATTCGAATGGTTGAGGGAGTAGGATCTCGATTCTTGCTGTTAAATTCATAAGGTTCGGGTAAGTGACCGATTGTTCAAAGAGCTCGTGTTTTAGCCTTTTTTGGACCTCAAACTCGTTTGGAAAATGAAAAGATTGGCAGAATTTCACTTCTAAATAAGGAGTTTCTATCAATTGATTGAATCCTATGAATGGTTCTTCAGCAATTTGTGTGATGGGGAGCTTGCTATTGCATCCTTTTAATTCCCGTGTGGTTCTACCTATCAGATGGGTGGAACTTTGAACATTGAAACTTCGAAGTTAGGTGGGTTGATGGTGGTGTTTTTACATGTCTATTAATAGAGCATATTCTTCAATGTAGAATGACTTGAATTACTTGATGACTATAGAGAATGCATTGAAAAAGAAGATGCATGTTCTTTCGCGTACCACCAATCCTGTAGAGAGTTGTCAGTTTCTTAAACATGTTCACCAGATTTTTAAGATGCTTATAAATGACTGGTAGCTATCATTCTTAATGGGGCTCTGAATAATTTCGATTTAGTTCTTGTTTCTTAGTATAGCTTTGTATCTCAGGCAGTGATTGCCATCATTTGCATCCAATATTTTACTGTAAGTTTTATGATCTGCAAATGAACAAAGAGCTGGTTAAAATTGATTCTTACGTGCACATTACGTTTAGCTTTGTGAGTGATATGCATATTACTTGGAACGAGTGAACCCGGAAACACTAGTTAGCTTATCTTTGCGATATTCTTTCTTCTTTGAGTTTTAATGGATAGAATGGAGGTTGTCAATTAAAATGTGGTTTGGATTGTGTTTTACAATATATGAATCCTGAGAACCATTTCATACACTGAAAATGGGTAGACACTTTTGTTGAGGATATCAAATGACACTTTTGTTGAGGATTATTAAGAGTAGTCCCACATTGGCTAATTAAGAGGAAGATCAAATGACACTTTTGTTGAGGATATCATGAGTTTATAAGTAAATAACACTATCTCCATTGGTACGAGACCTTTTGGGGAAACCAAAAGTGCTCAAAGTGGACAATATCGTACCATTGTGAAGATTTGTGATTCCTAACAACTGAATTATTCTATATTACCTAAATTTGTGTTCGGGGGAGGGACTGTACCAAGAAAAGTCATAATTAAAAGCTTAGAATGCTTTGGTGGTGCAAAAGAGGAGAACCGGTTTATACTTAAAAAGAACGTCACATAGAATGGTATGGTTTCTTTTTCAGCTAATTTGATTTCGTGAGATCTTTAGTGATCCTTTGCAGGTGGTTCATTTGGAGGGAATAGAGGATTGAGACCCGTACCCCCAGAGAAAGGAGTCTTCCCTTTGGATCATATGCACCTCTGCGACCAAGTATTTCCTTTTTGGAATATTTTTTCAAGGAATCTTTGTGTTCTTTTCTTGTTTCATGATGCATGAGCTTTATTGCAGGAGAAGAAAGAATACCTCAATTGTCTTAAAACCTCTGGTCACCAATCCGAAAAATGCAGGCACTTATCGAAAAAATACCTTGAATGTCGTATGGAAAAGTAAGATTCTTGACTTTTTATATCATCTTTTGTATAACAAAAGTAGCTTTGCTTTCTTATTTAAGATTCATAAACTTTTTGTTTGCGAGAACCTGGGTTGTTTATTATAATCGTATTAGTCATCCTTCATGGCGGTGCATGGTCAAGTATTTAAAAGTTTTTATCTTTTCAAAATAAATTATGCTAATAGTCCCTAGTAAAGGAATTAGGGTGGCCATCATAAACACAAAAATCAAGCTTTTCAGAGGCCTGCAGTTTCTAGAGCGTCAGCTGACCAAATTCCTAACTAAAAATGCCAACTTTCCCTTCTTTCTCTAGCTCGGTTAGTACCTACTAACTTCATATGCCCTGAAAACTTGGAATGGACCTTTCCTTTCTTTTCTAACCAATTCTACACCCTCCCTCGCTTTATAGTCCCTCAGGGTAAGTTAAACGGATTTAGGAAATTGCAAATGCTTTAGAACCAGTTGAAGTAATATTATGCCCATTGATTTCGGTTTATGATTTCAGTTTGAACTTGGGATACATTTCTTTTATTAAGCAAATGGTTTGGAGACAATTTCTTTTATGATTTCGGTTTGAACTTAGGATACATTTGTCAAGTGCAAATGAGAAGGTAACTGGATTGGAATCAAGCTAATTTGACCTTTACTTTCTCGTCTATGATGGCTCTCTTCTTCTTCTTTGAGTTACAGTTCCACTATGTTTCATTTCTTTTCCTACACTGCCACCTGAATTATTTTGAGTAACAATAATTGATTCTCAGAAAATTTGCACCGCTTTGTTTCGACTCCTAATCAAATGCTATGNTTGACCTTTACTTTCTCGTCTATGATGGCTCTCTTCTTCTTCTTTGAGTTACAGTTCCACTATGTTTCATTTCTTTTCCTACACTGCCACCTGAATTATTTTGAGTAACAATAATTGATTCTCAGAAAATTTGCACCGCTTTGTTTCGACTCCTAATCAAATGCTATGCAAATTGGTGGATTTGTTTCAACTTTATTTTAAGTATTTCACGTCATTTCATTGGATTCTTGCAGGAATTTAATGGCAAAACAAGACATGACGGAACTGGGATTTGAGACTTCGAGCCAGGCCAGTCTCTCTGGTGATAAATTGGAATAAGTCTAAAATTGTTCGGCCACAGAACCGTTTACTCACTTGTTCAAGTTATATCATCAACCAACCCTTCTATAACACGCTTTGAAGGAAGGAAATGTGATTTTTCTTAATGTATTGTCCTTCATAACAGTGCCTCTTTAACTCCTTGCGTACATCTCATATGTTCTTATCAATTTTTCAATATTGAGAGTAACTTTTCAACAGTTTTTTCAATTTGATTAGAGAACAAAGTTACAGGTGGTTGCGTTTCAACTATATTTGGCGCATTCCATGAGCAAAAACAGTGACTTGAATTACAAATAAATATTGATCTTCAAAACAATGGATTAGGAAAACTAAATGTTACCTCCTAACTGTCTTAAGCCTCCAAAGTGACAATATCATCAGATTCGTCTACCATCATCTCATTTCTGAAAAGGAGTTTCAAGTAGGGAAGAACCTTAGGTAGTACTAACAAATCTGCAACATTAACACTCATCAAGTCAAATGCAATGCAGGTTTTATGCATGTGTCTCTCTTCGATCACTGGAATTTTAGGGTATCTTTGACTGAAGTGTGTAAGGACAATTCGATACGCTCCGGCCGAGTTCCCTATGTCTACAGCTTCCGAAGTTGTGCTGTGGTTTTTAGCCACGGCCTCATCCATCAAGCTGTCCTCAAAAG

mRNA sequence

TTGGGCCTTGCAAAAGCTCCGGTGTCGGCCCAGTTATTTATCTGGGCCAAATTAGCAAATTGGGACTGGGCTGGACTTTTTCAGTTGGGCTTTGCCAAATCCCCGGCGTTGGCCCAGAGTAGTTTATCTCGATCCACTAGCATATCACCGGCGACGGTCAATCGATCTTGTTCGCGACTTGGCGGTCCGTATGATTCAAATGAAAATTTCTATATCGAGATTTCAGGAATTTCCACAATGAGTGCAGGTGGTTCATTTGGAGGGAATAGAGGATTGAGACCCGTACCCCCAGAGAAAGGAGTCTTCCCTTTGGATCATATGCACCTCTGCGACCAAGAGAAGAAAGAATACCTCAATTGTCTTAAAACCTCTGGTCACCAATCCGAAAAATGCAGGCACTTATCGAAAAAATACCTTGAATGTCGTATGGAAAAGAATTTAATGGCAAAACAAGACATGACGGAACTGGGATTTGAGACTTCGAGCCAGGCCAGTCTCTCTGGTGATAAATTGGAATAAGTCTAAAATTGTTCGGCCACAGAACCGTTTACTCACTTGTTCAAGTTATATCATCAACCAACCCTTCTATAACACGCTTTGAAGGAAGGAAATGTGATTTTTCTTAATGTATTGTCCTTCATAACAGTGCCTCTTTAACTCCTTGCGTACATCTCATATGTTCTTATCAATTTTTCAATATTGAGAGTAACTTTTCAACAGTTTTTTCAATTTGATTAGAGAACAAAGTTACAGGTGGTTGCGTTTCAACTATATTTGGCGCATTCCATGAGCAAAAACAGTGACTTGAATTACAAATAAATATTGATCTTCAAAACAATGGATTAGGAAAACTAAATGTTACCTCCTAACTGTCTTAAGCCTCCAAAGTGACAATATCATCAGATTCGTCTACCATCATCTCATTTCTGAAAAGGAGTTTCAAGTAGGGAAGAACCTTAGGTAGTACTAACAAATCTGCAACATTAACACTCATCAAGTCAAATGCAATGCAGGTTTTATGCATGTGTCTCTCTTCGATCACTGGAATTTTAGGGTATCTTTGACTGAAGTGTGTAAGGACAATTCGATACGCTCCGGCCGAGTTCCCTATGTCTACAGCTTCCGAAGTTGTGCTGTGGTTTTTAGCCACGGCCTCATCCATCAAGCTGTCCTCAAAAG

Coding sequence (CDS)

TTGGGCCTTGCAAAAGCTCCGGTGTCGGCCCAGTTATTTATCTGGGCCAAATTAGCAAATTGGGACTGGGCTGGACTTTTTCAGTTGGGCTTTGCCAAATCCCCGGCGTTGGCCCAGAGTAGTTTATCTCGATCCACTAGCATATCACCGGCGACGGTCAATCGATCTTGTTCGCGACTTGGCGGTCCGTATGATTCAAATGAAAATTTCTATATCGAGATTTCAGGAATTTCCACAATGAGTGCAGGTGGTTCATTTGGAGGGAATAGAGGATTGAGACCCGTACCCCCAGAGAAAGGAGTCTTCCCTTTGGATCATATGCACCTCTGCGACCAAGAGAAGAAAGAATACCTCAATTGTCTTAAAACCTCTGGTCACCAATCCGAAAAATGCAGGCACTTATCGAAAAAATACCTTGAATGTCGTATGGAAAAGAATTTAATGGCAAAACAAGACATGACGGAACTGGGATTTGAGACTTCGAGCCAGGCCAGTCTCTCTGGTGATAAATTGGAATAA

Protein sequence

LGLAKAPVSAQLFIWAKLANWDWAGLFQLGFAKSPALAQSSLSRSTSISPATVNRSCSRLGGPYDSNENFYIEISGISTMSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFETSSQASLSGDKLE

Homology

[Close]

BLAST of Cp4.1LG12g08370 vs. ExPASy Swiss-Prot
Match: O14056 (Cytochrome c oxidase assembly protein cox19, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cox19 PE=3 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 6.0e-14
Identity = 42/90 (46.67%), Postives = 52/90 (57.78%), Query Frame = 0


Query: 85  SFGGNRGLRPV----PPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYLE 144
           SFG   G  P+    PPE+G FPLDH   C    K+YL C+K      E+CR L+KKYL+
Sbjct: 2   SFGAAGGSLPMTTREPPERGSFPLDHFGECTHVMKQYLECIKVKRENQEECRLLAKKYLQ 61

Query: 145 CRMEKNLMAKQDMTELGF---ETSSQASLS 168
           CRM+  L  K DM  LGF   E ++  SLS
Sbjct: 62  CRMDTGLFGKDDMKNLGFHGDENATSTSLS 91

[Close]

BLAST of Cp4.1LG12g08370 vs. ExPASy Swiss-Prot
Match: A8E4L1 (Cytochrome c oxidase assembly protein COX19 OS=Bos taurus OX=9913 GN=COX19 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.7e-13
Identity = 35/79 (44.30%), Postives = 55/79 (69.62%), Query Frame = 0


Query: 80  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 139
           MS   +F G++  +P PP+KG FPLDH   C   K++++ CL+ +  ++  CR+ SK+YL
Sbjct: 1   MSTAMNF-GSKSFQPRPPDKGSFPLDHFGECKSFKEKFMKCLRDNNFENALCRNESKEYL 60

Query: 140 ECRMEKNLMAKQDMTELGF 159
           ECRME+ LMA++ + +LGF
Sbjct: 61  ECRMERQLMAQEPLEKLGF 78

[Close]

BLAST of Cp4.1LG12g08370 vs. ExPASy Swiss-Prot
Match: Q54IA0 (Cytochrome c oxidase assembly protein COX19 OS=Dictyostelium discoideum OX=44689 GN=cox19 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.7e-13
Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = 0


Query: 93  RPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQD 152
           +P PP+KG FPLDH   C +    Y+NCL  +   S  C   SK+YL+CRM+ NLMAK+D
Sbjct: 11  KPTPPDKGSFPLDHDSECSKPMLAYVNCLSENNGLSRFCMEFSKEYLKCRMDNNLMAKED 70

Query: 153 MTELGFETSSQASL 167
           M   GFE   +A +
Sbjct: 71  MDNFGFEEVKKAKI 84

[Close]

BLAST of Cp4.1LG12g08370 vs. ExPASy Swiss-Prot
Match: Q4P821 (Cytochrome c oxidase assembly protein COX19 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=COX19 PE=3 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 2.3e-13
Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 96  PPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTE 155
           PPE+G FPLDH   C    +EY+NC+K + + + KCRHLS+ YL+CRM+K LM + +M  
Sbjct: 16  PPERGSFPLDHDGECKSVMQEYMNCIKYNRNDNGKCRHLSRAYLQCRMDKGLMEQDNMDN 75

Query: 156 LGFE 160
           LGF+
Sbjct: 76  LGFK 79

[Close]

BLAST of Cp4.1LG12g08370 vs. ExPASy Swiss-Prot
Match: P0CT19 (Cytochrome c oxidase assembly protein COX19 OS=Magnaporthe oryzae (strain Y34) OX=1143189 GN=COX19 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.9e-13
Identity = 40/92 (43.48%), Postives = 52/92 (56.52%), Query Frame = 0


Query: 80  MSA-GGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCL-KTSGHQSEKCRHLSKK 139
           MSA GG  GG    +P+PP++G FPLDH   C      YL C+ K  G    +CR  +K 
Sbjct: 1   MSAFGGPGGGQINQKPIPPQRGSFPLDHDGECKHVMTSYLACMKKVRGVNDNECREFAKS 60

Query: 140 YLECRMEKNLMAKQDMTELGFETSSQASLSGD 170
           YL CRM+ NLMA+ +   LGF+    +S  GD
Sbjct: 61  YLACRMDHNLMARDEFKNLGFQDVKDSSNKGD 92

[Close]

BLAST of Cp4.1LG12g08370 vs. NCBI nr
Match: XP_023549276.1 (cytochrome c oxidase assembly protein COX19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 192 bits (488), Expect = 2.27e-60
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 80  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 139
           MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL
Sbjct: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 140 ECRMEKNLMAKQDMTELGFETSSQASLSGDKLE 172
           ECRMEKNLMAKQDMTELGFETSSQASLSGDKLE
Sbjct: 61  ECRMEKNLMAKQDMTELGFETSSQASLSGDKLE 93

[Close]

BLAST of Cp4.1LG12g08370 vs. NCBI nr
Match: XP_022953732.1 (cytochrome c oxidase assembly protein COX19-like isoform X1 [Cucurbita moschata] >KAG7014061.1 Cytochrome c oxidase assembly protein COX19, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 189 bits (481), Expect = 2.64e-59
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 80  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 139
           MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL
Sbjct: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 140 ECRMEKNLMAKQDMTELGFETSSQASLSGDKLE 172
           ECRMEKNLMAKQDMTELGF TSSQASLSGDKLE
Sbjct: 61  ECRMEKNLMAKQDMTELGFGTSSQASLSGDKLE 93

[Close]

BLAST of Cp4.1LG12g08370 vs. NCBI nr
Match: KAG6575522.1 (Cytochrome c oxidase assembly protein COX19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 188 bits (478), Expect = 7.56e-59
Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 80  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 139
           MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL
Sbjct: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 140 ECRMEKNLMAKQDMTELGFETSSQASLSGDKLE 172
           ECRMEKNLMAKQDMTELGF T+SQASLSGDKLE
Sbjct: 61  ECRMEKNLMAKQDMTELGFGTASQASLSGDKLE 93

[Close]

BLAST of Cp4.1LG12g08370 vs. NCBI nr
Match: XP_023522653.1 (cytochrome c oxidase assembly protein COX19-like, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 187 bits (476), Expect = 1.48e-58
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 80  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 139
           MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL
Sbjct: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 140 ECRMEKNLMAKQDMTELGFETSSQASLSGDKL 171
           ECRMEKNLMAKQDMTELGF TSSQASLSGDKL
Sbjct: 61  ECRMEKNLMAKQDMTELGFGTSSQASLSGDKL 92

[Close]

BLAST of Cp4.1LG12g08370 vs. NCBI nr
Match: XP_022992451.1 (cytochrome c oxidase assembly protein COX19-like [Cucurbita maxima])

HSP 1 Score: 187 bits (475), Expect = 2.16e-58
Identity = 91/93 (97.85%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 80  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 139
           MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL
Sbjct: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 140 ECRMEKNLMAKQDMTELGFETSSQASLSGDKLE 172
           ECRMEKNLMAKQDMTELGF TSSQASLS DKLE
Sbjct: 61  ECRMEKNLMAKQDMTELGFGTSSQASLSSDKLE 93

[Close]

BLAST of Cp4.1LG12g08370 vs. ExPASy TrEMBL
Match: A0A6J1GP22 (cytochrome c oxidase assembly protein COX19-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456178 PE=4 SV=1)

HSP 1 Score: 189 bits (481), Expect = 1.28e-59
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 80  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 139
           MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL
Sbjct: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 140 ECRMEKNLMAKQDMTELGFETSSQASLSGDKLE 172
           ECRMEKNLMAKQDMTELGF TSSQASLSGDKLE
Sbjct: 61  ECRMEKNLMAKQDMTELGFGTSSQASLSGDKLE 93

[Close]

BLAST of Cp4.1LG12g08370 vs. ExPASy TrEMBL
Match: A0A6J1JTL1 (cytochrome c oxidase assembly protein COX19-like OS=Cucurbita maxima OX=3661 GN=LOC111488751 PE=4 SV=1)

HSP 1 Score: 187 bits (475), Expect = 1.05e-58
Identity = 91/93 (97.85%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 80  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 139
           MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL
Sbjct: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 140 ECRMEKNLMAKQDMTELGFETSSQASLSGDKLE 172
           ECRMEKNLMAKQDMTELGF TSSQASLS DKLE
Sbjct: 61  ECRMEKNLMAKQDMTELGFGTSSQASLSSDKLE 93

[Close]

BLAST of Cp4.1LG12g08370 vs. ExPASy TrEMBL
Match: A0A5A7UTU4 (Cytochrome c oxidase assembly protein COX19-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G00460 PE=4 SV=1)

HSP 1 Score: 180 bits (457), Expect = 6.13e-56
Identity = 87/93 (93.55%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 80  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 139
           MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCD EKKEYLNCLKTSGH+SEKCRHLSKKYL
Sbjct: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60

Query: 140 ECRMEKNLMAKQDMTELGFETSSQASLSGDKLE 172
           ECRMEKNLMAKQDMTELGF + SQA+LSGDKLE
Sbjct: 61  ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLE 93

[Close]

BLAST of Cp4.1LG12g08370 vs. ExPASy TrEMBL
Match: A0A1S3CGW0 (cytochrome c oxidase assembly protein COX19-like OS=Cucumis melo OX=3656 GN=LOC103500603 PE=4 SV=1)

HSP 1 Score: 180 bits (457), Expect = 6.13e-56
Identity = 87/93 (93.55%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 80  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 139
           MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCD EKKEYLNCLKTSGH+SEKCRHLSKKYL
Sbjct: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60

Query: 140 ECRMEKNLMAKQDMTELGFETSSQASLSGDKLE 172
           ECRMEKNLMAKQDMTELGF + SQA+LSGDKLE
Sbjct: 61  ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLE 93

[Close]

BLAST of Cp4.1LG12g08370 vs. ExPASy TrEMBL
Match: A0A6J1HMG5 (cytochrome c oxidase assembly protein COX19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464297 PE=4 SV=1)

HSP 1 Score: 177 bits (450), Expect = 7.12e-55
Identity = 86/93 (92.47%), Postives = 87/93 (93.55%), Query Frame = 0


Query: 80  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 139
           MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCD EKKEYLNCLKTSGHQSEKCRHLSKKYL
Sbjct: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 140 ECRMEKNLMAKQDMTELGFETSSQASLSGDKLE 172
           +CRMEKNLMAKQDM ELGF   SQ SLSGDKLE
Sbjct: 61  QCRMEKNLMAKQDMAELGFGNLSQPSLSGDKLE 93

[Close]

BLAST of Cp4.1LG12g08370 vs. TAIR 10
Match: AT1G69750.1 (cytochrome c oxidase 19-2 )

HSP 1 Score: 146.4 bits (368), Expect = 2.2e-35
Identity = 66/91 (72.53%), Postives = 76/91 (83.52%), Query Frame = 0


Query: 80  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 139
           MS GG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S H+SE+CRHLSKKYL
Sbjct: 1   MSTGGAFGGNRGLRPIPPEKGIFPLDHLHECDAEKKEYLGCLKSSAHKSEQCRHLSKKYL 60

Query: 140 ECRMEKNLMAKQDMTELGFETSSQASLSGDK 171
           +CRM KNLMAKQDM ELGF    +   + DK
Sbjct: 61  QCRMAKNLMAKQDMAELGFSGVKELDSTEDK 91

[Close]

BLAST of Cp4.1LG12g08370 vs. TAIR 10
Match: AT1G66590.1 (cytochrome c oxidase 19-1 )

HSP 1 Score: 146.4 bits (368), Expect = 2.2e-35
Identity = 66/91 (72.53%), Postives = 76/91 (83.52%), Query Frame = 0


Query: 80  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 139
           MS GG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S H+SE+CRHLSKKYL
Sbjct: 1   MSTGGAFGGNRGLRPIPPEKGIFPLDHLHECDAEKKEYLGCLKSSAHKSEQCRHLSKKYL 60

Query: 140 ECRMEKNLMAKQDMTELGFETSSQASLSGDK 171
           +CRM KNLMAKQDM ELGF    +   + DK
Sbjct: 61  QCRMAKNLMAKQDMAELGFSGVKELDSTEDK 91

[Close]

BLAST of Cp4.1LG12g08370 vs. TAIR 10
Match: AT1G66590.2 (cytochrome c oxidase 19-1 )

HSP 1 Score: 144.1 bits (362), Expect = 1.1e-34
Identity = 65/89 (73.03%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 82  AGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYLEC 141
           AGG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S H+SE+CRHLSKKYL+C
Sbjct: 18  AGGAFGGNRGLRPIPPEKGIFPLDHLHECDAEKKEYLGCLKSSAHKSEQCRHLSKKYLQC 77

Query: 142 RMEKNLMAKQDMTELGFETSSQASLSGDK 171
           RM KNLMAKQDM ELGF    +   + DK
Sbjct: 78  RMAKNLMAKQDMAELGFSGVKELDSTEDK 106

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g08370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O14056	6.0e-14	46.67	Cytochrome c oxidase assembly protein cox19, mitochondrial OS=Schizosaccharomyce...	[more]
A8E4L1	1.7e-13	44.30	Cytochrome c oxidase assembly protein COX19 OS=Bos taurus OX=9913 GN=COX19 PE=3 ...	[more]
Q54IA0	1.7e-13	47.30	Cytochrome c oxidase assembly protein COX19 OS=Dictyostelium discoideum OX=44689...	[more]
Q4P821	2.3e-13	51.56	Cytochrome c oxidase assembly protein COX19 OS=Ustilago maydis (strain 521 / FGS...	[more]
P0CT19	3.9e-13	43.48	Cytochrome c oxidase assembly protein COX19 OS=Magnaporthe oryzae (strain Y34) O...	[more]

BLAST of Cp4.1LG12g08370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549276.1	2.27e-60	100.00	cytochrome c oxidase assembly protein COX19-like [Cucurbita pepo subsp. pepo]	[more]
XP_022953732.1	2.64e-59	98.92	cytochrome c oxidase assembly protein COX19-like isoform X1 [Cucurbita moschata]...	[more]
KAG6575522.1	7.56e-59	97.85	Cytochrome c oxidase assembly protein COX19, partial [Cucurbita argyrosperma sub...	[more]
XP_023522653.1	1.48e-58	98.91	cytochrome c oxidase assembly protein COX19-like, partial [Cucurbita pepo subsp....	[more]
XP_022992451.1	2.16e-58	97.85	cytochrome c oxidase assembly protein COX19-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG12g08370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GP22	1.28e-59	98.92	cytochrome c oxidase assembly protein COX19-like isoform X1 OS=Cucurbita moschat...	[more]
A0A6J1JTL1	1.05e-58	97.85	cytochrome c oxidase assembly protein COX19-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A5A7UTU4	6.13e-56	93.55	Cytochrome c oxidase assembly protein COX19-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3CGW0	6.13e-56	93.55	cytochrome c oxidase assembly protein COX19-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1HMG5	7.12e-55	92.47	cytochrome c oxidase assembly protein COX19-like isoform X2 OS=Cucurbita moschat...	[more]

BLAST of Cp4.1LG12g08370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69750.1	2.2e-35	72.53	cytochrome c oxidase 19-2	[more]
AT1G66590.1	2.2e-35	72.53	cytochrome c oxidase 19-1	[more]
AT1G66590.2	1.1e-34	73.03	cytochrome c oxidase 19-1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010625	CHCH	PFAM	PF06747	CHCH	coord: 110..143 e-value: 2.9E-8 score: 33.6
None	No IPR available	PANTHER	PTHR47565	CYTOCHROME C OXIDASE 19-1	coord: 80..165
None	No IPR available	PANTHER	PTHR47565:SF4	CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX19-LIKE	coord: 80..165
None	No IPR available	PROSITE	PS51808	CHCH	coord: 107..149 score: 14.933468
IPR009069	Cysteine alpha-hairpin motif superfamily	SUPERFAMILY	47072	Cysteine alpha-hairpin motif	coord: 106..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g08370.1	Cp4.1LG12g08370.1	mRNA