Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCAAACAAACGCCATTAACAAACACAAACACAAACACAAATTCACTGAATTCCATATACTCTCACATTTTTTCACCCATCAAATATCTCCACAACAATCCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCGATGGCCCCGTTGGTCCAAACCAATTTCCATTCCCATCAAATCCGTAAATCAACCAAACAAAATCCCTCCATCTCTCTCTCTCTCTCTCTCTTCCCTAAATCAACCAACTTCCCTCAATCCCCCCTCTCTTTTTCGTTTTCTTCTAGGTTTAACTTCTTCTTCAATCCCTCCATCCTTTCCATTTCCTCTCTTTCAATCGGATCAACAAACCTCCAAAACCGGAGGCGCGCGGTTTGTTCCAGACACCGATGATCGGAATCAATCATCCAGGTCTCTTGCAGGATTACGCCGAGCTGCACAATGTAATATGTTCTTTTATGCATTTTTTCCCCCTGTTTTGATCTCTTCTTTTCATACGTTTCATCCTTACGACTTCTTGTTCTTCGATTATTGTTGTTTTTTCCTTGTTCATTTGCTGCTGAATTTGGTCTCAGATATTAGAAATTGTTTGGATTTTATTTGGTTGCTGAGAAAATTGTGAATTACTGAAATATTGCTTTTGATGTTTGTGTTAATTTTTGGTGTCTTTGAATGCTAAAACAACCTTAGACTTCGACAAATTTGTACGTATCCTGGCCCGGCCACCTCAACTAATGCATATATTCTCGACCAAGAAGTTAAACATTCGAACCATTCCACGTGTTTTGTTTTGTGTTTAGTGTTCAAATCATGGTGGCTTCTTCAGATAATTTGCCTTCTTCTGTAATTGCCTACAAGTTGTAAGTTCATACGACTTTGTGATCACGTGTTCATATCGTGGTGGCAAGTTACACGTGGGATAATAAACATGTTGTAGGGTTAGTTTTTTGATCTCGTCGAGTGAGATTAGTTGAGATTCGAGGAACTATGAATGTTTCAAACTACTGTTCATAAGTTATAAATTCAAATGTAGACTAGGCGTCTCTAGCGGGGCCTAGTCTAAATTAGTCGAGGTAAGAGTTCGGCCTCTTGGCGGGCCTAGTCTAAATTAGTCGAGGTACGAGTTATAGGGTTGGTTAGTTTTTTTATGCTCGTCGAGTGAGATTAGTCGAGGTACGAGTAAGTATGAATGTTTCAATCTACCGTCTATAAGTTATAACTTCAAATTTAGACTAGGCCTCTCTAGCGGGGCCTAGTCTAAATTAGTCGAGCTACGAGTTATAGGGTTACTTTTTTAATCTTGTCGAGTGAGACTAGTCGAGGTATGAGGGCCTTCTCTAGCAAGGCCTAGTCTAAATATTCTAGGCAGTTAGGGTTACATTTTTAATCTCGTTTCAATCTACCGTCTATATTTTATAACTTCAAATTTAGACTAGGCCTCTCTAGCAAGGCCTAGTCTAAATTAGTCGAGGTACAAGTTATAGGGTTACTTGATCTCGTCGAGTGAGATTAGTCGAGCTATGAGTAACTACAAATGTTTCAATCTACTGTCCATAAGTTATAACTTCAAATTTAGAACTAGGCCTCTCTAGTGGGGCGCTCGGGCTCTCTGAAACATCTACTGTCCATAAGTTATAACTTCAAATTTAGAACTAGGCCTCTCTAGTGGGGCGCTCGGGCTCTCTAGTGGGGCGCTCGGGCACTTAGCATAACTCGGAGAAACTTCATATATAGAACTTGACCAATTGAATCATTTTCATTTCAGGAAACAGAAGCATTGAAGGAGAAACTGTTGATCTTGAAGCAGAAAAAGTCGACCCTTTTGGCTGAAGTTCGGTATAGTTTAGAACCATTCTTCTCCTTTAATGTTGTGAATTTCTATGAGGAATCTGTTAATGTTGTGAATTGAGTCATGTTTATTTCCATTCTCCTTTAGCTTTTTGAGGCATAAATATGAACTCTTGAAGAACCACCCTGAAACTCAACCAAAGGCTGGTTTCAAGCTGCCACAGAACCTTAAAATCCGACCTCCCGTCTCAAAGAAAGAAAATCGTTCTCGAAAAAGAGAAGCTCGTAACTTAAACCGAAGGGGAGGAATCTCCGATGGGACGGAAGCCACCACTCGAAAAGCTCGGTCGGTTTGCGACGTAAACCAGAAGTCAAGGATGTGCAGCAAGAAGGAAATGAGTATACTCCATTATTTTCCTATTGTTAGCCAGAAAGAGAGAGTATACAGAGCACATGAAGTTGCTGCCAATACGAACATGACCCCGGTGTTCGATCTTAACCAGATCTCGGTACCTATGATGACTCCGAATCTTGTTTCTTATAGTTAAATACATTTGCTCTCAGTTTTTTAACATATGTTTCTTGCTTCAGAGGGAGGAAGAAGAATTGCAGGTGGGTTTCGAACCACTAAGAAAGGAGGACGACGATGACGAGCTGAAGAATATCTGTTCGAGAAGCGAAGTCGATGCGAAGAACAGTGACTTGATGGTGTCGTCCATGTGTAGGAATGTTGGCAATGGATCAAACAGAGCAGGAAAAAGGAAGATCTCATGGCAAGACCGAGTGGCATTAAGAGCTTGAAATTCTCTCTTCATTTGCCTGTGGGAAATTAACTGGGCTTCCTTGAAATTCCATTGTTATTATTATTTTATATAGTTCTCACTCGGCTCGAGAAAATTACGACCCTACAATGTTTGTCAATAGAAAGTTCGATAAGGTTCTTAGGAACGACTTTCTAAGTGCTTAAGAAGAGTTTTTTAAGTATTAGAAAGAAACTCTTAAGCACGTGGAAAGTCATTCCGAATGTACCTTATTTTTGAAGTATATCTAACGTCGCAAGTTTGGGTTATCATCAAAACTGTGATCTTGACGATGTCTAAATTACGATTTTTTTCATCTTAGGTACTCAGACGTTGATAGCGGTGG
mRNA sequence
TGCAAACAAACGCCATTAACAAACACAAACACAAACACAAATTCACTGAATTCCATATACTCTCACATTTTTTCACCCATCAAATATCTCCACAACAATCCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCGATGGCCCCGTTGGTCCAAACCAATTTCCATTCCCATCAAATCCGTAAATCAACCAAACAAAATCCCTCCATCTCTCTCTCTCTCTCTCTCTTCCCTAAATCAACCAACTTCCCTCAATCCCCCCTCTCTTTTTCGTTTTCTTCTAGGTTTAACTTCTTCTTCAATCCCTCCATCCTTTCCATTTCCTCTCTTTCAATCGGATCAACAAACCTCCAAAACCGGAGGCGCGCGGTTTGTTCCAGACACCGATGATCGGAATCAATCATCCAGGTCTCTTGCAGGATTACGCCGAGCTGCACAATGAAACAGAAGCATTGAAGGAGAAACTGTTGATCTTGAAGCAGAAAAAGTCGACCCTTTTGGCTGAAGTTCGCTTTTTGAGGCATAAATATGAACTCTTGAAGAACCACCCTGAAACTCAACCAAAGGCTGGTTTCAAGCTGCCACAGAACCTTAAAATCCGACCTCCCGTCTCAAAGAAAGAAAATCGTTCTCGAAAAAGAGAAGCTCGTAACTTAAACCGAAGGGGAGGAATCTCCGATGGGACGGAAGCCACCACTCGAAAAGCTCGGTCGGTTTGCGACGTAAACCAGAAGTCAAGGATGTGCAGCAAGAAGGAAATGAGTATACTCCATTATTTTCCTATTGTTAGCCAGAAAGAGAGAGTATACAGAGCACATGAAGTTGCTGCCAATACGAACATGACCCCGGTGTTCGATCTTAACCAGATCTCGAGGGAGGAAGAAGAATTGCAGGTGGGTTTCGAACCACTAAGAAAGGAGGACGACGATGACGAGCTGAAGAATATCTGTTCGAGAAGCGAAGTCGATGCGAAGAACAGTGACTTGATGGTGTCGTCCATGTGTAGGAATGTTGGCAATGGATCAAACAGAGCAGGAAAAAGGAAGATCTCATGGCAAGACCGAGTGGCATTAAGAGCTTGAAATTCTCTCTTCATTTGCCTGTGGGAAATTAACTGGGCTTCCTTGAAATTCCATTGTTATTATTATTTTATATAGTTCTCACTCGGCTCGAGAAAATTACGACCCTACAATGTTTGTCAATAGAAAGTTCGATAAGGTTCTTAGGAACGACTTTCTAAGTGCTTAAGAAGAGTTTTTTAAGTATTAGAAAGAAACTCTTAAGCACGTGGAAAGTCATTCCGAATGTACCTTATTTTTGAAGTATATCTAACGTCGCAAGTTTGGGTTATCATCAAAACTGTGATCTTGACGATGTCTAAATTACGATTTTTTTCATCTTAGGTACTCAGACGTTGATAGCGGTGG
Coding sequence (CDS)
ATGATCGGAATCAATCATCCAGGTCTCTTGCAGGATTACGCCGAGCTGCACAATGAAACAGAAGCATTGAAGGAGAAACTGTTGATCTTGAAGCAGAAAAAGTCGACCCTTTTGGCTGAAGTTCGCTTTTTGAGGCATAAATATGAACTCTTGAAGAACCACCCTGAAACTCAACCAAAGGCTGGTTTCAAGCTGCCACAGAACCTTAAAATCCGACCTCCCGTCTCAAAGAAAGAAAATCGTTCTCGAAAAAGAGAAGCTCGTAACTTAAACCGAAGGGGAGGAATCTCCGATGGGACGGAAGCCACCACTCGAAAAGCTCGGTCGGTTTGCGACGTAAACCAGAAGTCAAGGATGTGCAGCAAGAAGGAAATGAGTATACTCCATTATTTTCCTATTGTTAGCCAGAAAGAGAGAGTATACAGAGCACATGAAGTTGCTGCCAATACGAACATGACCCCGGTGTTCGATCTTAACCAGATCTCGAGGGAGGAAGAAGAATTGCAGGTGGGTTTCGAACCACTAAGAAAGGAGGACGACGATGACGAGCTGAAGAATATCTGTTCGAGAAGCGAAGTCGATGCGAAGAACAGTGACTTGATGGTGTCGTCCATGTGTAGGAATGTTGGCAATGGATCAAACAGAGCAGGAAAAAGGAAGATCTCATGGCAAGACCGAGTGGCATTAAGAGCTTGA
Protein sequence
MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPKAGFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMCSKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDDDDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA
Homology
BLAST of Cp4.1LG11g08320 vs. NCBI nr
Match:
XP_023546781.1 (uncharacterized protein LOC111805783 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 449 bits (1156), Expect = 4.25e-159
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0
Query: 1 MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60
MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK
Sbjct: 1 MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60
Query: 61 AGFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMC 120
AGFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMC
Sbjct: 61 AGFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMC 120
Query: 121 SKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDD 180
SKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDD
Sbjct: 121 SKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDD 180
Query: 181 DDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231
DDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA
Sbjct: 181 DDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231
BLAST of Cp4.1LG11g08320 vs. NCBI nr
Match:
KAG7030088.1 (hypothetical protein SDJN02_08435 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 430 bits (1105), Expect = 2.72e-151
Identity = 221/233 (94.85%), Postives = 226/233 (97.00%), Query Frame = 0
Query: 1 MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60
MIGINHPGLLQDYA+LHNETEA+KEKLLIL QKKSTLLAEVRFLRHKYELLKNHPETQPK
Sbjct: 1 MIGINHPGLLQDYAQLHNETEAMKEKLLILNQKKSTLLAEVRFLRHKYELLKNHPETQPK 60
Query: 61 AGFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMC 120
GFKLPQNLKIRPPVSKKENRSRKREARNLN+RGGISDGTEATTRKARSVCDVNQKSRMC
Sbjct: 61 LGFKLPQNLKIRPPVSKKENRSRKREARNLNQRGGISDGTEATTRKARSVCDVNQKSRMC 120
Query: 121 SKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDD 180
SKKEMS+LHYFPIVSQKERVYRAHEVA NTNMTPVFDLNQISREEEELQ GFEPLR E+D
Sbjct: 121 SKKEMSVLHYFPIVSQKERVYRAHEVATNTNMTPVFDLNQISREEEELQAGFEPLRTEED 180
Query: 181 DD--ELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231
DD ELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA
Sbjct: 181 DDNDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 233
BLAST of Cp4.1LG11g08320 vs. NCBI nr
Match:
XP_022999758.1 (uncharacterized protein LOC111494012 [Cucurbita maxima])
HSP 1 Score: 424 bits (1089), Expect = 6.95e-149
Identity = 217/231 (93.94%), Postives = 224/231 (96.97%), Query Frame = 0
Query: 1 MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60
MI INHP LLQDYAEL NETEA+KEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK
Sbjct: 1 MIRINHPPLLQDYAELQNETEAMKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60
Query: 61 AGFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMC 120
GFKLPQNLKIRPPVSKKENRSRKREARNLN+RGGISDG EATTRKARSVC+VNQKSRMC
Sbjct: 61 VGFKLPQNLKIRPPVSKKENRSRKREARNLNQRGGISDGMEATTRKARSVCNVNQKSRMC 120
Query: 121 SKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDD 180
SKKEMSILHYFPI+SQKERVYRAHEVA NTNMTPVFDLNQISREEEELQVGFEP+R ED+
Sbjct: 121 SKKEMSILHYFPIISQKERVYRAHEVATNTNMTPVFDLNQISREEEELQVGFEPIRTEDE 180
Query: 181 DDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231
+DELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA
Sbjct: 181 NDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231
BLAST of Cp4.1LG11g08320 vs. NCBI nr
Match:
XP_022946544.1 (uncharacterized protein LOC111450577 [Cucurbita moschata])
HSP 1 Score: 420 bits (1080), Expect = 1.58e-147
Identity = 217/231 (93.94%), Postives = 221/231 (95.67%), Query Frame = 0
Query: 1 MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60
MIGINH GLLQDYAELHNETEA KEKLLILKQKK TLLAEVRFLRHKYELLKNHPETQPK
Sbjct: 1 MIGINHTGLLQDYAELHNETEATKEKLLILKQKKLTLLAEVRFLRHKYELLKNHPETQPK 60
Query: 61 AGFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMC 120
GFKLPQNLKIRPPVSKKENRS+KREARNLNRRGGISDGTEATTRKAR VCDVNQKSRMC
Sbjct: 61 LGFKLPQNLKIRPPVSKKENRSQKREARNLNRRGGISDGTEATTRKARLVCDVNQKSRMC 120
Query: 121 SKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDD 180
SKKEM++LHYFP+VSQKERVYRAHEVA NTNMTPVFDLNQISREEEELQ GFEPLR DD
Sbjct: 121 SKKEMNVLHYFPVVSQKERVYRAHEVATNTNMTPVFDLNQISREEEELQAGFEPLRTADD 180
Query: 181 DDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231
D ELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA
Sbjct: 181 D-ELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 230
BLAST of Cp4.1LG11g08320 vs. NCBI nr
Match:
KAG6599145.1 (Signal recognition particle receptor subunit alpha-like protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 384 bits (987), Expect = 2.02e-125
Identity = 198/211 (93.84%), Postives = 204/211 (96.68%), Query Frame = 0
Query: 1 MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60
MI INHPGLLQDYA+LHNETEA+KEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK
Sbjct: 1 MIEINHPGLLQDYAQLHNETEAMKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60
Query: 61 AGFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMC 120
GFKLPQNLKIRPPVSKKENRSRKREARNLN+RGGISDGTEATTRKARSVCDVNQKSRMC
Sbjct: 61 LGFKLPQNLKIRPPVSKKENRSRKREARNLNQRGGISDGTEATTRKARSVCDVNQKSRMC 120
Query: 121 SKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDD 180
SKKEMS+LHYFPIVSQKERVYRAHEVA NTNMTPVFDLNQISREEEELQ GFEPLR E+D
Sbjct: 121 SKKEMSVLHYFPIVSQKERVYRAHEVATNTNMTPVFDLNQISREEEELQAGFEPLRTEED 180
Query: 181 DD--ELKNICSRSEVDAKNSDLMVSSMCRNV 209
DD ELKNICSRSEVDAKNSDLMVSSMCRN+
Sbjct: 181 DDNDELKNICSRSEVDAKNSDLMVSSMCRNI 211
BLAST of Cp4.1LG11g08320 vs. ExPASy TrEMBL
Match:
A0A6J1KKM1 (uncharacterized protein LOC111494012 OS=Cucurbita maxima OX=3661 GN=LOC111494012 PE=4 SV=1)
HSP 1 Score: 424 bits (1089), Expect = 3.36e-149
Identity = 217/231 (93.94%), Postives = 224/231 (96.97%), Query Frame = 0
Query: 1 MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60
MI INHP LLQDYAEL NETEA+KEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK
Sbjct: 1 MIRINHPPLLQDYAELQNETEAMKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60
Query: 61 AGFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMC 120
GFKLPQNLKIRPPVSKKENRSRKREARNLN+RGGISDG EATTRKARSVC+VNQKSRMC
Sbjct: 61 VGFKLPQNLKIRPPVSKKENRSRKREARNLNQRGGISDGMEATTRKARSVCNVNQKSRMC 120
Query: 121 SKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDD 180
SKKEMSILHYFPI+SQKERVYRAHEVA NTNMTPVFDLNQISREEEELQVGFEP+R ED+
Sbjct: 121 SKKEMSILHYFPIISQKERVYRAHEVATNTNMTPVFDLNQISREEEELQVGFEPIRTEDE 180
Query: 181 DDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231
+DELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA
Sbjct: 181 NDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231
BLAST of Cp4.1LG11g08320 vs. ExPASy TrEMBL
Match:
A0A6J1G446 (uncharacterized protein LOC111450577 OS=Cucurbita moschata OX=3662 GN=LOC111450577 PE=4 SV=1)
HSP 1 Score: 420 bits (1080), Expect = 7.64e-148
Identity = 217/231 (93.94%), Postives = 221/231 (95.67%), Query Frame = 0
Query: 1 MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60
MIGINH GLLQDYAELHNETEA KEKLLILKQKK TLLAEVRFLRHKYELLKNHPETQPK
Sbjct: 1 MIGINHTGLLQDYAELHNETEATKEKLLILKQKKLTLLAEVRFLRHKYELLKNHPETQPK 60
Query: 61 AGFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMC 120
GFKLPQNLKIRPPVSKKENRS+KREARNLNRRGGISDGTEATTRKAR VCDVNQKSRMC
Sbjct: 61 LGFKLPQNLKIRPPVSKKENRSQKREARNLNRRGGISDGTEATTRKARLVCDVNQKSRMC 120
Query: 121 SKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDD 180
SKKEM++LHYFP+VSQKERVYRAHEVA NTNMTPVFDLNQISREEEELQ GFEPLR DD
Sbjct: 121 SKKEMNVLHYFPVVSQKERVYRAHEVATNTNMTPVFDLNQISREEEELQAGFEPLRTADD 180
Query: 181 DDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231
D ELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA
Sbjct: 181 D-ELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 230
BLAST of Cp4.1LG11g08320 vs. ExPASy TrEMBL
Match:
A0A5A7URJ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00350 PE=4 SV=1)
HSP 1 Score: 303 bits (776), Expect = 4.06e-101
Identity = 165/240 (68.75%), Postives = 192/240 (80.00%), Query Frame = 0
Query: 1 MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPET-QP 60
M+GI H LLQDY ELHNETEA+K+KLLI K+KK+TLL EVRFLRH+YELLKN P QP
Sbjct: 22 MVGIKHQSLLQDYQELHNETEAVKKKLLIAKRKKATLLDEVRFLRHRYELLKNQPANIQP 81
Query: 61 KAGFKLPQNLKIRPPVSKKENRSRKREA--------RNLNRRGGISDGTEATTRKARSVC 120
K GFKL +NL++RPP+ KKE SRKREA +LN+RGGI +G EA++RK++S
Sbjct: 82 KVGFKLSRNLELRPPIVKKEKSSRKREASLKPLAQAHDLNQRGGIYNGIEASSRKSQSFF 141
Query: 121 DVNQKSRMCSKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVG 180
D+NQKS CSKKE+ + + FP QKERVYRAHE AAN NMTPVFDLNQISREEEE+Q G
Sbjct: 142 DLNQKSNTCSKKEVIMNNSFPTFDQKERVYRAHEAAANRNMTPVFDLNQISREEEEMQAG 201
Query: 181 FEPLRKEDDDDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231
FEPLR+ +D E KNI RSE DAKNSDL++SSMCRN NGSNRAGKRKISWQD+VALRA
Sbjct: 202 FEPLRQLED--ESKNIFPRSEHDAKNSDLVLSSMCRNDDNGSNRAGKRKISWQDQVALRA 259
BLAST of Cp4.1LG11g08320 vs. ExPASy TrEMBL
Match:
A0A1S3BVT4 (uncharacterized protein LOC103493683 OS=Cucumis melo OX=3656 GN=LOC103493683 PE=4 SV=1)
HSP 1 Score: 303 bits (776), Expect = 4.06e-101
Identity = 165/240 (68.75%), Postives = 192/240 (80.00%), Query Frame = 0
Query: 1 MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPET-QP 60
M+GI H LLQDY ELHNETEA+K+KLLI K+KK+TLL EVRFLRH+YELLKN P QP
Sbjct: 22 MVGIKHQSLLQDYQELHNETEAVKKKLLIAKRKKATLLDEVRFLRHRYELLKNQPANIQP 81
Query: 61 KAGFKLPQNLKIRPPVSKKENRSRKREA--------RNLNRRGGISDGTEATTRKARSVC 120
K GFKL +NL++RPP+ KKE SRKREA +LN+RGGI +G EA++RK++S
Sbjct: 82 KVGFKLSRNLELRPPIVKKEKSSRKREASLKPLAQAHDLNQRGGIYNGIEASSRKSQSFF 141
Query: 121 DVNQKSRMCSKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVG 180
D+NQKS CSKKE+ + + FP QKERVYRAHE AAN NMTPVFDLNQISREEEE+Q G
Sbjct: 142 DLNQKSNTCSKKEVIMNNSFPTFDQKERVYRAHEAAANRNMTPVFDLNQISREEEEMQAG 201
Query: 181 FEPLRKEDDDDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231
FEPLR+ +D E KNI RSE DAKNSDL++SSMCRN NGSNRAGKRKISWQD+VALRA
Sbjct: 202 FEPLRQLED--ESKNIFPRSEHDAKNSDLVLSSMCRNDDNGSNRAGKRKISWQDQVALRA 259
BLAST of Cp4.1LG11g08320 vs. ExPASy TrEMBL
Match:
A0A0A0LH29 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035530 PE=4 SV=1)
HSP 1 Score: 296 bits (757), Expect = 3.03e-98
Identity = 161/240 (67.08%), Postives = 187/240 (77.92%), Query Frame = 0
Query: 1 MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPET-QP 60
M+GI H LLQDY ELHNETEA+K+KLLI K+KK TLL EVRFLRH+YELLK P QP
Sbjct: 22 MVGIKHQSLLQDYEELHNETEAMKKKLLIAKRKKETLLDEVRFLRHRYELLKKQPANIQP 81
Query: 61 KAGFKLPQNLKIRPPVSKKENRSRKREA--------RNLNRRGGISDGTEATTRKARSVC 120
K GFK P+NL+++PP KKE SRKREA ++N+RGGI +G EA++RK++S
Sbjct: 82 KVGFKRPRNLELKPPTVKKEKSSRKREASLKPLAQAHDVNQRGGIYNGVEASSRKSQSFF 141
Query: 121 DVNQKSRMCSKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVG 180
D+NQKS CSKKE+ + FP QKERVYRAHE AAN NMTPVFDLNQISREEEELQ G
Sbjct: 142 DLNQKSNTCSKKEVIVNSSFPTFDQKERVYRAHEAAANRNMTPVFDLNQISREEEELQAG 201
Query: 181 FEPLRKEDDDDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231
F+P+R ED E KNI RSE DAKNS+L++SSMCRN NGSNRAGKRKISWQD+VALRA
Sbjct: 202 FKPVRLED---EPKNIFPRSEHDAKNSELVLSSMCRNDDNGSNRAGKRKISWQDQVALRA 258
BLAST of Cp4.1LG11g08320 vs. TAIR 10
Match:
AT5G57910.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 89.7 bits (221), Expect = 3.2e-18
Identity = 81/230 (35.22%), Postives = 112/230 (48.70%), Query Frame = 0
Query: 2 IGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPKA 61
+ H L+QDY ELH ETEA++++L ++++K+TL+AEVRFLR +Y L+ + K
Sbjct: 21 VRFRHHSLMQDYGELHMETEAMRKRLQAVRERKATLMAEVRFLRRRYRHLRQDQPQEIKK 80
Query: 62 GFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMCS 121
+ KIR VS S+ +EA T+ S+ D+N +
Sbjct: 81 VRRSNGGKKIRVEVSP-------------------SNKSEAETKHV-SLPDLNHSEK--- 140
Query: 122 KKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDDD 181
H S K RV P+FDLNQIS EEE+ + +E+
Sbjct: 141 ------AHDETKTSPKRRV-------------PLFDLNQISGEEEQETEAVDN-NQENTR 200
Query: 182 DELKNICSR---SEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVA 229
E N C R S ++ + D+ SS CRN GNGSN KRKISWQD VA
Sbjct: 201 VEESNSCKRLMISSIEMQQKDVKPSS-CRNGGNGSN---KRKISWQDPVA 203
BLAST of Cp4.1LG11g08320 vs. TAIR 10
Match:
AT4G30630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57910.1); Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 73.6 bits (179), Expect = 2.4e-13
Identity = 78/230 (33.91%), Postives = 116/230 (50.43%), Query Frame = 0
Query: 15 ELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHP--ETQPK-------AGFKL 74
EL E E +++L ++KQK+ TL +EVRFLR +YE LK ET P+ G ++
Sbjct: 26 ELEKELEIKRKRLEMIKQKRLTLKSEVRFLRRRYEHLKQDQTLETSPEMLRLSESGGLEV 85
Query: 75 PQNLKIRPPVSKKENRSRKREA---RNLNRRGGISDGTEATTRKARSVCDVNQKSRMCSK 134
P R P +++ +S R + +L + I + EA S CD+++K + +
Sbjct: 86 P-----RKPSGERKKQSGVRASVPCFDLKLKNTICNEKEALANNVAS-CDLDKKRK---R 145
Query: 135 KEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDDDD 194
S + FP+ + T+ P FDLNQISREEEE +V E + E
Sbjct: 146 SRGSDVLTFPVSLPD---LNGEGNTSGTDKVPGFDLNQISREEEEPEVNGEHMVAE---- 205
Query: 195 ELKNICSRSEVDAKNSDLMVS---SMCRNVGNGSNRAGKRKISWQDRVAL 230
+KN + +D + SDL V +C +V NRA KRK++WQD VAL
Sbjct: 206 AMKN----AMLDNRISDLHVERKLPICGDVEKELNRAVKRKVTWQDPVAL 235
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023546781.1 | 4.25e-159 | 100.00 | uncharacterized protein LOC111805783 [Cucurbita pepo subsp. pepo] | [more] |
KAG7030088.1 | 2.72e-151 | 94.85 | hypothetical protein SDJN02_08435 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_022999758.1 | 6.95e-149 | 93.94 | uncharacterized protein LOC111494012 [Cucurbita maxima] | [more] |
XP_022946544.1 | 1.58e-147 | 93.94 | uncharacterized protein LOC111450577 [Cucurbita moschata] | [more] |
KAG6599145.1 | 2.02e-125 | 93.84 | Signal recognition particle receptor subunit alpha-like protein, partial [Cucurb... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1KKM1 | 3.36e-149 | 93.94 | uncharacterized protein LOC111494012 OS=Cucurbita maxima OX=3661 GN=LOC111494012... | [more] |
A0A6J1G446 | 7.64e-148 | 93.94 | uncharacterized protein LOC111450577 OS=Cucurbita moschata OX=3662 GN=LOC1114505... | [more] |
A0A5A7URJ0 | 4.06e-101 | 68.75 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3BVT4 | 4.06e-101 | 68.75 | uncharacterized protein LOC103493683 OS=Cucumis melo OX=3656 GN=LOC103493683 PE=... | [more] |
A0A0A0LH29 | 3.03e-98 | 67.08 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035530 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT5G57910.1 | 3.2e-18 | 35.22 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT4G30630.1 | 2.4e-13 | 33.91 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |