Cp4.1LG11g08040 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG11g08040
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionNADH-ubiquinone oxidoreductase chain 5
LocationCp4.1LG11: 6499720 .. 6503279 (-)
RNA-Seq ExpressionCp4.1LG11g08040
SyntenyCp4.1LG11g08040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGCCCGAGCCGGAGTGTGACCAAGAGAATGTCACAAGCCATCCCTAGAATAAATGGCAACAAACCCTAAAAATGTCCTCCACAAGCAAGGCATGGAGATGGGCATGGGCATGGGGATGGGCATGGGCATGGGCCTGATGCAGAGCCGAACGTAATGGGCAAAGGGGATGAAAAGAGTATGACAAACAAATAAGAACCCAAATCAAGAGGTCCATTACATTTTGATTCAGCACAGTCCACGGAATTGAATGGAATTTGGGGAAGAACAAGAAACGAAGAGGAAGAAGGGCAGAGAGGGAGAGGGGTTGGTTGTAGTAAGAGAAGGTCCACGCAGCGCAACCTCAACCTGAACCACTGCGAATTCAACGCTCATGCTCTCTCTCAATTCCATTTCTCAATTCCTCGTTCCATTCATCTGTGGCTGTGTTAAATTCCCCATTCTTCATCGTCGCCCTTCAGAGAAACCAACCTCTCGGGGCGCAGCCATGATTACTCGATCGAATCTGGTTGAACAGTTGAGAGAATACCAGATTCGATCCAAGCACGACTGGGCTTCCGCCTCCTTCTTCTCCTCTACCTCTAATATTACATCCTCCAGGTATCTCCCATTCATTTCCTACTTCCTTGTTTTACCTACGATTCTCGTTGTTACATGTTCATTCTTTAGATTCTCAATCTTCTGTGTTCGTTCTGTTTCCTTTTTATTGTTTGTGATCGATGAACGTGGCTTTTGTGTTCTTTAAAACTCTCAATTACAGGATTCGGATCATTGTAGATTTTCACAGACCGTGTCTCAAATTTGTTTTATTTTGTATGAGATGATTCAATTTGTTTCATTTTTCTGGTCCATGAACTTTGGCATTTGTCAAGATCGTATTACAATTATTGATTGCTTTTGTTCTGGGCATTAATCTTCGATAATCCCTGCGTTGATTAGAAAAGGAAAATAATGGTGATCGTGTGGAATTTGGTACTTGAAACGGGATTTTTGTAAATAAATGTCATGATGCATCATGTCATTCTGTGAGTCTCTTTAGCCGTAGCCTGGGAAATTTCTTGTACTTACAAGTTTAGCATCAAATCCTTACATTATGAGTTTCAGTTGATAGAGTTCTGTTTGTTCATATCTCGCCTTGTTTGCTAATTGCATTGCACTCGAGGAAATTATGTTCGAAATTGTACCAAAGTTATCAGATTCTTGAAGAAAACCCACTTGTATTAATGTTTTAGCATCCAATTATGCATCTCTGGTGAGTGAAGTTCTAAGTTTCAAATCACACAATCTTGAGAATACGTTTTTCATGTTTATAATTGTTAATTTTTCTAGTGTCAATTGGGAGAAGAACTCTTGTATGTTCCTAGCACGATGTTTGTTCAATGTTATTTGTTTGTTTTAGGTTCTAAAGAATGTATGATAGTTAACAGGAACTATAGATGCATTCTTAGCTTGGAACTATAGATGCATTCTTAGCTTGGAACTAGTTCATTATTGATCAAGAGCGTTCACTTAAACCAATCGACACATCTTTTTGTCTTATGTACAACATATCCAAATAGATATCCGTAGGCTTGACTCGGTGCTACTGTCCATAACACATTCTTTATCGTGTTCGGTTTATGTATTCGATTTGCTCTCCTGATGGATCTTATGTACAACATATCCAATAGACATCCGTAGGCTTGACACGGTGCTACTGTTCATAACACATTCTTTATCGTTCGGTATATGCATTCGATTTGCTCTCCTGATAGATCTTATGTACAACATATTCAAATAGATATCTGTAGGCTTGACATGGTGCTACTGTTCATAACACATTCTTTATCGTTCGGTATATGTATTCGATTTGCTCTCCTGATAGATCTTATGTACAACATATTCAAATAGATATTTGTAGGCTTGACATGGTGCTACTGTTCATAACACATTCTTTATCGTTCGGTATATGTATTCGATTTGCTCTCCTGATAGATCTTATGTACAACATATTCAAATAGATATTTGTAGGCTTGACATGGTGCTACTGTTCATAACACATTCTTTATCGTTTGGTATATGTATTCGATTTGCTCTCCTGATAGATCTTATGTACAACATATCCAAATAGATATCTGTAGGCTTGACACGATGCTCATTCACTATCGTTCGGTTTATATATTTGATTTGCTCTCCTGATAGATCCTATGTACAACATATCCAAATAGATATCCGTAGGCTTGACACGGGGCTACCATCCATAACACATTCGTTACCGTTCTGTTTATGTATTTGATTTGCTCTCCTGATAGATCTTATGTACAACACATCCAAATAGATATCCGTAGGCTTGACACGGTGCTACTGTCCATAACACATTCTTTACCGTTCGGTTTAGGTATTTGATTTGCTCTCGTGNTGATGCAGTCTTGATAAATTGTTTATTATTATTATTATTATTTTATTAATTTCAATGTATTCCAGTTTGTTGATATGCAAAGTCATTTAACAACAGCTTTCAAAATGGACGAGAACTCTTCAACACCAACCCCATCTTTNTTGACACGGTGCTACTGTCCATAACACATTCTTTACCGTTCGGTTTAGGTATTTGATTTGCTCTCGTGATAGATCCTATGTACAACATATCCAAATAGATATCCGTAGGCTTGACTCGGTGCTACTGTCCATAACACATTCTTTACCGTTCGGTTTGTGTATTTGATTTGCTCTCCTGATAGATCCTATGTACAACATATCCAAATAGATATCTGTAGGCTTGACACGGTGCTACTGTCCATAACACATTCTTTACCGTTCAGTTTACGTATTTGATTGTCTCTCCTGATAATGTACAACATATCCAAATAGATATCCGTTAGGCTTGACTCGGTGCTACTGTCCATAACACCTTCTTTATCGTTCGGTTTATGTATTCAGTTAGCTCTCCTGATAGCATGAAGATATCCAATATGATATCACTTCTAATGTACATGTTGATTGTTGTATTCTTGATGCAGGGTGGATGTAGTCATTTTTGTAATATGGGAACTCATAATTCTATCCTTCTTGGTGTTTTCGGCGGTCTCTTTATATTTTCGACATATACAGTTGACTTTCGTTTTAGTATGCATAACGATGTTGTTGATTGTATGCATGAAAGTAACAAAGCAAATGAGATTGGCTAGGAAGAATAAAAGNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAATGTTCTAAATGCCCTGAATTATATTCATGAAGAAATAGATTTGGTCCTTTCTCCTCCCCTTCATTCTTTGTTACATTGGGATCTGTAGTCACCAGGGAAGCTGCTTTTATANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAAGAGATTGATGTGGTTAGTTTAGAACTCTGTGAATGCTTTCTTATCTGAGAGTTTTGATCATCTTCATAATGTTACTCAGTTTCAGGTAGTTATGATCTTAATCTAACATATTACAAGGAAAGGAAGATGATGATGTTTAGTTTGTTCGAAAAAAT

mRNA sequence

GAGCCCGAGCCGGAGTGTGACCAAGAGAATGTCACAAGCCATCCCTAGAATAAATGGCAACAAACCCTAAAAATGTCCTCCACAAGCAAGGCATGGAGATGGGCATGGGCATGGGGATGGGCATGGGCATGGGCCTGATGCAGAGCCGAACGTAATGGGCAAAGGGGATGAAAAGAGTATGACAAACAAATAAGAACCCAAATCAAGAGGTCCATTACATTTTGATTCAGCACAGTCCACGGAATTGAATGGAATTTGGGGAAGAACAAGAAACGAAGAGGAAGAAGGGCAGAGAGGGAGAGGGGTTGGTTGTAGTAAGAGAAGGTCCACGCAGCGCAACCTCAACCTGAACCACTGCGAATTCAACGCTCATGCTCTCTCTCAATTCCATTTCTCAATTCCTCGTTCCATTCATCTGTGGCTGTGTTAAATTCCCCATTCTTCATCGTCGCCCTTCAGAGAAACCAACCTCTCGGGGCGCAGCCATGATTACTCGATCGAATCTGGTTGAACAGTTGAGAGAATACCAGATTCGATCCAAGCACGACTGGGCTTCCGCCTCCTTCTTCTCCTCTACCTCTAATATTACATCCTCCAGATCTTATGTACAACACATCCAAATAGATATCCGTAGGCTTGACACGGTGCTACTGTCCATAACACATTCTTTACCGTTCGGTTTAGGGTGGATGTAGTCATTTTTGTAATATGGGAACTCATAATTCTATCCTTCTTGGTGTTTTCGGCGGTCTCTTTATATTTTCGACATATACAGTTGACTTTCGTTTTAGTATGCATAACGATGTTGTTGATTGTATGCATGAAAGTAACAAAGCAAATGAGATTGGCTAGGAAGAATAAAAGNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAATGTTCTAAATGCCCTGAATTATATTCATGAAGAAATAGATTTGGTCCTTTCTCCTCCCCTTCATTCTTTGTTACATTGGGATCTGTAGTCACCAGGGAAGCTGCTTTTATANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAAGAGATTGATGTGGTTAGTTTAGAACTCTGTGAATGCTTTCTTATCTGAGAGTTTTGATCATCTTCATAATGTTACTCAGTTTCAGGTAGTTATGATCTTAATCTAACATATTACAAGGAAAGGAAGATGATGATGTTTAGTTTGTTCGAAAAAAT

Coding sequence (CDS)

ATGCTCTCTCTCAATTCCATTTCTCAATTCCTCGTTCCATTCATCTGTGGCTGTGTTAAATTCCCCATTCTTCATCGTCGCCCTTCAGAGAAACCAACCTCTCGGGGCGCAGCCATGATTACTCGATCGAATCTGGTTGAACAGTTGAGAGAATACCAGATTCGATCCAAGCACGACTGGGCTTCCGCCTCCTTCTTCTCCTCTACCTCTAATATTACATCCTCCAGATCTTATGTACAACACATCCAAATAGATATCCGTAGGCTTGACACGGTGCTACTGTCCATAACACATTCTTTACCGTTCGGTTTAGGGTGGATGTAG

Protein sequence

MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRSYVQHIQIDIRRLDTVLLSITHSLPFGLGWM
Homology
[Close]
BLAST of Cp4.1LG11g08040 vs. NCBI nr
Match: KAG6599112.1 (hypothetical protein SDJN03_08890, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030052.1 hypothetical protein SDJN02_08398, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 154 bits (388), Expect = 1.50e-45
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW 60
          MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW
Sbjct: 1  MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW 60

Query: 61 ASASFFSSTSNITSSR 76
          ASASFFSSTSNITSSR
Sbjct: 61 ASASFFSSTSNITSSR 76

[Close]
BLAST of Cp4.1LG11g08040 vs. NCBI nr
Match: XP_022946845.1 (uncharacterized protein LOC111450786 [Cucurbita moschata])

HSP 1 Score: 154 bits (388), Expect = 1.50e-45
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW 60
          MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW
Sbjct: 1  MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW 60

Query: 61 ASASFFSSTSNITSSR 76
          ASASFFSSTSNITSSR
Sbjct: 61 ASASFFSSTSNITSSR 76

[Close]
BLAST of Cp4.1LG11g08040 vs. NCBI nr
Match: XP_022999777.1 (uncharacterized protein LOC111494024 [Cucurbita maxima])

HSP 1 Score: 152 bits (384), Expect = 6.11e-45
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 0 

Query: 1  MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW 60
          MLSLNSISQFLVPFICGCVKFPI HRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW
Sbjct: 1  MLSLNSISQFLVPFICGCVKFPIFHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW 60

Query: 61 ASASFFSSTSNITSSR 76
          ASASFFSSTSNITSSR
Sbjct: 61 ASASFFSSTSNITSSR 76

[Close]
BLAST of Cp4.1LG11g08040 vs. NCBI nr
Match: XP_038884232.1 (uncharacterized protein LOC120075129 [Benincasa hispida])

HSP 1 Score: 120 bits (302), Expect = 1.99e-32
Identity = 64/80 (80.00%), Postives = 68/80 (85.00%), Query Frame = 0 

Query: 1  MLSLNSISQFLVPFICGCVKFPILHRRPS----EKPTSRGAAMITRSNLVEQLREYQIRS 60
          MLSLNSISQFLV F+C CVK  ILH RPS    +K  SRG+AMITRSNLVEQLREYQIRS
Sbjct: 1  MLSLNSISQFLVRFVCRCVKSSILHPRPSSLEAKKRKSRGSAMITRSNLVEQLREYQIRS 60

Query: 61 KHDWASASFFSSTSNITSSR 76
          KH+WAS SFFSSTSNITSSR
Sbjct: 61 KHEWASVSFFSSTSNITSSR 80

[Close]
BLAST of Cp4.1LG11g08040 vs. NCBI nr
Match: XP_008464875.1 (PREDICTED: uncharacterized protein LOC103502637 isoform X2 [Cucumis melo])

HSP 1 Score: 106 bits (265), Expect = 2.45e-27
Identity = 60/82 (73.17%), Postives = 65/82 (79.27%), Query Frame = 0 

Query: 1  MLSLNSISQFLVPFICGCVKFPILHRRPS----EKPTSRGAA--MITRSNLVEQLREYQI 60
          MLSLNSISQFLV F+C C +  ILH   S    +K  SRG+A  MITRSNLVEQLREYQI
Sbjct: 1  MLSLNSISQFLVRFLCRCFRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI 60

Query: 61 RSKHDWASASFFSSTSNITSSR 76
          RSKH+WAS SFFSSTSNITSSR
Sbjct: 61 RSKHEWASVSFFSSTSNITSSR 82

[Close]
BLAST of Cp4.1LG11g08040 vs. ExPASy TrEMBL
Match: A0A6J1G568 (uncharacterized protein LOC111450786 OS=Cucurbita moschata OX=3662 GN=LOC111450786 PE=4 SV=1)

HSP 1 Score: 154 bits (388), Expect = 7.28e-46
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW 60
          MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW
Sbjct: 1  MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW 60

Query: 61 ASASFFSSTSNITSSR 76
          ASASFFSSTSNITSSR
Sbjct: 61 ASASFFSSTSNITSSR 76

[Close]
BLAST of Cp4.1LG11g08040 vs. ExPASy TrEMBL
Match: A0A6J1KBR2 (uncharacterized protein LOC111494024 OS=Cucurbita maxima OX=3661 GN=LOC111494024 PE=4 SV=1)

HSP 1 Score: 152 bits (384), Expect = 2.96e-45
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 0 

Query: 1  MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW 60
          MLSLNSISQFLVPFICGCVKFPI HRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW
Sbjct: 1  MLSLNSISQFLVPFICGCVKFPIFHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW 60

Query: 61 ASASFFSSTSNITSSR 76
          ASASFFSSTSNITSSR
Sbjct: 61 ASASFFSSTSNITSSR 76

[Close]
BLAST of Cp4.1LG11g08040 vs. ExPASy TrEMBL
Match: A0A1S3CN04 (uncharacterized protein LOC103502637 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502637 PE=4 SV=1)

HSP 1 Score: 106 bits (265), Expect = 1.19e-27
Identity = 60/82 (73.17%), Postives = 65/82 (79.27%), Query Frame = 0 

Query: 1  MLSLNSISQFLVPFICGCVKFPILHRRPS----EKPTSRGAA--MITRSNLVEQLREYQI 60
          MLSLNSISQFLV F+C C +  ILH   S    +K  SRG+A  MITRSNLVEQLREYQI
Sbjct: 1  MLSLNSISQFLVRFLCRCFRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI 60

Query: 61 RSKHDWASASFFSSTSNITSSR 76
          RSKH+WAS SFFSSTSNITSSR
Sbjct: 61 RSKHEWASVSFFSSTSNITSSR 82

[Close]
BLAST of Cp4.1LG11g08040 vs. ExPASy TrEMBL
Match: A0A1S3CMK7 (uncharacterized protein LOC103502637 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502637 PE=4 SV=1)

HSP 1 Score: 106 bits (265), Expect = 4.13e-27
Identity = 60/82 (73.17%), Postives = 65/82 (79.27%), Query Frame = 0 

Query: 1  MLSLNSISQFLVPFICGCVKFPILHRRPS----EKPTSRGAA--MITRSNLVEQLREYQI 60
          MLSLNSISQFLV F+C C +  ILH   S    +K  SRG+A  MITRSNLVEQLREYQI
Sbjct: 1  MLSLNSISQFLVRFLCRCFRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI 60

Query: 61 RSKHDWASASFFSSTSNITSSR 76
          RSKH+WAS SFFSSTSNITSSR
Sbjct: 61 RSKHEWASVSFFSSTSNITSSR 82

[Close]
BLAST of Cp4.1LG11g08040 vs. ExPASy TrEMBL
Match: A0A6J1GHS6 (uncharacterized protein LOC111454282 OS=Cucurbita moschata OX=3662 GN=LOC111454282 PE=4 SV=1)

HSP 1 Score: 107 bits (266), Expect = 4.51e-27
Identity = 57/79 (72.15%), Postives = 63/79 (79.75%), Query Frame = 0 

Query: 2  LSLNSISQFLVPFICGCVKFPILHRRPS----EKPTSRGAAMITRSNLVEQLREYQIRSK 61
          LSLNSISQFL+ F+  C K   LHRRP+    ++  SRGAAMITRSNLVEQLREYQIRSK
Sbjct: 20 LSLNSISQFLLHFVSHCFKSSDLHRRPTSPEAKETRSRGAAMITRSNLVEQLREYQIRSK 79

Query: 62 HDWASASFFSSTSNITSSR 76
          H+WAS S FSS SNITSSR
Sbjct: 80 HEWASVSLFSSASNITSSR 98

[Close]
BLAST of Cp4.1LG11g08040 vs. TAIR 10
Match: AT1G76185.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20460.1); Has 37 Blast hits to 37 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.1 bits (170), Expect = 1.2e-12
Identity = 34/38 (89.47%), Postives = 35/38 (92.11%), Query Frame = 0 

Query: 39 MITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSR 77
          MITRSNL EQLREYQIRSKHDWAS SFFSSTSN +SSR
Sbjct: 1  MITRSNLAEQLREYQIRSKHDWASVSFFSSTSNFSSSR 38

[Close]
BLAST of Cp4.1LG11g08040 vs. TAIR 10
Match: AT1G20460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76185.1); Has 37 Blast hits to 37 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.1 bits (170), Expect = 1.2e-12
Identity = 34/38 (89.47%), Postives = 35/38 (92.11%), Query Frame = 0 

Query: 39 MITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSR 77
          MITRSNL EQLREYQIRSKHDWAS SFFSSTSN +SSR
Sbjct: 1  MITRSNLAEQLREYQIRSKHDWASVSFFSSTSNFSSSR 38

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g08040 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG11g08040 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6599112.11.50e-45100.00hypothetical protein SDJN03_08890, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022946845.11.50e-45100.00uncharacterized protein LOC111450786 [Cucurbita moschata][more]
XP_022999777.16.11e-4598.68uncharacterized protein LOC111494024 [Cucurbita maxima][more]
XP_038884232.11.99e-3280.00uncharacterized protein LOC120075129 [Benincasa hispida][more]
XP_008464875.12.45e-2773.17PREDICTED: uncharacterized protein LOC103502637 isoform X2 [Cucumis melo][more]
BLAST of Cp4.1LG11g08040 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G5687.28e-46100.00uncharacterized protein LOC111450786 OS=Cucurbita moschata OX=3662 GN=LOC1114507... [more]
A0A6J1KBR22.96e-4598.68uncharacterized protein LOC111494024 OS=Cucurbita maxima OX=3661 GN=LOC111494024... [more]
A0A1S3CN041.19e-2773.17uncharacterized protein LOC103502637 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3CMK74.13e-2773.17uncharacterized protein LOC103502637 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1GHS64.51e-2772.15uncharacterized protein LOC111454282 OS=Cucurbita moschata OX=3662 GN=LOC1114542... [more]
BLAST of Cp4.1LG11g08040 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G76185.11.2e-1289.47unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G20460.11.2e-1289.47unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34936:SF7PROTEIN, PUTATIVE-RELATEDcoord: 39..82
NoneNo IPR availablePANTHERPTHR34936EXPRESSED PROTEINcoord: 39..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g08040.1Cp4.1LG11g08040.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane