Cp4.1LG10g10080 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g10080
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Mitochondrial pyruvate carrier 2-like
Location	Cp4.1LG10: 4325363 .. 4325959 (+)
RNA-Seq Expression	Cp4.1LG10g10080
Synteny	Cp4.1LG10g10080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGCTTTGCCGTAAAAACACCGTTCATCCATCGCCGCCGATAATTTCCGACTTCCTTTCGTTTTTGCCGGCCGCCATATTCACCCTCACTGTGGTTCTTTCCGCCGATGACAAGGAAGTCCTGGCTTATCTCATCTCCTGTTCCAACACCAGCGCCTCTCTCTCCAACTTATCTAGCACTCGCAAGTCCGGTCGGAAACCCACCGCCGGAAAGGTCGGTGTCGATCACGCTCCGATTTTCGACTGCGATTGTTTCATGTGCTATCGGCGATACTGGGCGAGATGGGACTCGTCGCCGAATCGGCAACTTATTCATGAAATAATCGAAGCTTACGAAGATGGATTGGCCAAATCGAAAGGCACAGCAACCACACAGAGGAATTTCAAGAAAGAAAGACGGAAGAAAAATAAGGAATCGGTTGCTGGTGAATCAAGCGTGGGGAAGGGGAAGAAGATGAAGGAGGCATCGGAGTCCGTGCAGCAGGAGAGCAGCCGCGATGGGAATGGACAAGAAGAAGAAGGAGAAGAAAGGGGATCGGTAAGTAGGTTCGTGAGTTTTGTGGGCGAGAAAATTTGGAGTGCTTGGGGGTAA

mRNA sequence

ATGAAGAAGCTTTGCCGTAAAAACACCGTTCATCCATCGCCGCCGATAATTTCCGACTTCCTTTCGTTTTTGCCGGCCGCCATATTCACCCTCACTGTGGTTCTTTCCGCCGATGACAAGGAAGTCCTGGCTTATCTCATCTCCTGTTCCAACACCAGCGCCTCTCTCTCCAACTTATCTAGCACTCGCAAGTCCGGTCGGAAACCCACCGCCGGAAAGGTCGGTGTCGATCACGCTCCGATTTTCGACTGCGATTGTTTCATGTGCTATCGGCGATACTGGGCGAGATGGGACTCGTCGCCGAATCGGCAACTTATTCATGAAATAATCGAAGCTTACGAAGATGGATTGGCCAAATCGAAAGGCACAGCAACCACACAGAGGAATTTCAAGAAAGAAAGACGGAAGAAAAATAAGGAATCGGTTGCTGGTGAATCAAGCGTGGGGAAGGGGAAGAAGATGAAGGAGGCATCGGAGTCCGTGCAGCAGGAGAGCAGCCGCGATGGGAATGGACAAGAAGAAGAAGGAGAAGAAAGGGGATCGGTAAGTAGGTTCGTGAGTTTTGTGGGCGAGAAAATTTGGAGTGCTTGGGGGTAA

Coding sequence (CDS)

ATGAAGAAGCTTTGCCGTAAAAACACCGTTCATCCATCGCCGCCGATAATTTCCGACTTCCTTTCGTTTTTGCCGGCCGCCATATTCACCCTCACTGTGGTTCTTTCCGCCGATGACAAGGAAGTCCTGGCTTATCTCATCTCCTGTTCCAACACCAGCGCCTCTCTCTCCAACTTATCTAGCACTCGCAAGTCCGGTCGGAAACCCACCGCCGGAAAGGTCGGTGTCGATCACGCTCCGATTTTCGACTGCGATTGTTTCATGTGCTATCGGCGATACTGGGCGAGATGGGACTCGTCGCCGAATCGGCAACTTATTCATGAAATAATCGAAGCTTACGAAGATGGATTGGCCAAATCGAAAGGCACAGCAACCACACAGAGGAATTTCAAGAAAGAAAGACGGAAGAAAAATAAGGAATCGGTTGCTGGTGAATCAAGCGTGGGGAAGGGGAAGAAGATGAAGGAGGCATCGGAGTCCGTGCAGCAGGAGAGCAGCCGCGATGGGAATGGACAAGAAGAAGAAGGAGAAGAAAGGGGATCGGTAAGTAGGTTCGTGAGTTTTGTGGGCGAGAAAATTTGGAGTGCTTGGGGGTAA

Protein sequence

MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVVLSADDKEVLAYLISCSNTSASLSNLSSTRKSGRKPTAGKVGVDHAPIFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKSKGTATTQRNFKKERRKKNKESVAGESSVGKGKKMKEASESVQQESSRDGNGQEEEGEERGSVSRFVSFVGEKIWSAWG

Homology

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BLAST of Cp4.1LG10g10080 vs. NCBI nr
Match: XP_023544435.1 (uncharacterized protein LOC111804018 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 383 bits (984), Expect = 5.68e-134
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVVLSADDKEVLAYLISCSNTSASLSNLS 60
           MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVVLSADDKEVLAYLISCSNTSASLSNLS
Sbjct: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVVLSADDKEVLAYLISCSNTSASLSNLS 60

Query: 61  STRKSGRKPTAGKVGVDHAPIFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKS 120
           STRKSGRKPTAGKVGVDHAPIFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKS
Sbjct: 61  STRKSGRKPTAGKVGVDHAPIFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKS 120

Query: 121 KGTATTQRNFKKERRKKNKESVAGESSVGKGKKMKEASESVQQESSRDGNGQEEEGEERG 180
           KGTATTQRNFKKERRKKNKESVAGESSVGKGKKMKEASESVQQESSRDGNGQEEEGEERG
Sbjct: 121 KGTATTQRNFKKERRKKNKESVAGESSVGKGKKMKEASESVQQESSRDGNGQEEEGEERG 180

Query: 181 SVSRFVSFVGEKIWSAWG 198
           SVSRFVSFVGEKIWSAWG
Sbjct: 181 SVSRFVSFVGEKIWSAWG 198

[Close]

BLAST of Cp4.1LG10g10080 vs. NCBI nr
Match: KAG7033980.1 (hypothetical protein SDJN02_03706, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 374 bits (959), Expect = 3.55e-130
Identity = 194/198 (97.98%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVVLSADDKEVLAYLISCSNTSASLSNLS 60
           MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTV LSADDKEVLAYLISCSNTSASLSNLS
Sbjct: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVALSADDKEVLAYLISCSNTSASLSNLS 60

Query: 61  STRKSGRKPTAGKVGVDHAPIFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKS 120
           STRKSGRKPTAGKVGVDHAP+FDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKS
Sbjct: 61  STRKSGRKPTAGKVGVDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKS 120

Query: 121 KGTATTQRNFKKERRKKNKESVAGESSVGKGKKMKEASESVQQESSRDGNGQEEEGEERG 180
           KGTATTQRNFKKE+RKKNKESVAGESSVGKGK MKEASESVQQESSRDGNGQEEEGEERG
Sbjct: 121 KGTATTQRNFKKEKRKKNKESVAGESSVGKGK-MKEASESVQQESSRDGNGQEEEGEERG 180

Query: 181 SVSRFVSFVGEKIWSAWG 198
           SVSRFVSFVGEKIWSAWG
Sbjct: 181 SVSRFVSFVGEKIWSAWG 197

[Close]

BLAST of Cp4.1LG10g10080 vs. NCBI nr
Match: XP_022979041.1 (uncharacterized protein LOC111478801 [Cucurbita maxima])

HSP 1 Score: 360 bits (923), Expect = 1.09e-124
Identity = 187/198 (94.44%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVVLSADDKEVLAYLISCSNTSASLSNLS 60
           MKKLCRKNTVHPSPPIISDFLSFLPA IFTLTV LSADDKEVLAYLISCSNTSASLSNLS
Sbjct: 1   MKKLCRKNTVHPSPPIISDFLSFLPAVIFTLTVALSADDKEVLAYLISCSNTSASLSNLS 60

Query: 61  STRKSGRKPTAGKVGVDHAPIFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKS 120
            TRKSGRKPTAGKVGVDHAP+FDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAK 
Sbjct: 61  DTRKSGRKPTAGKVGVDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKP 120

Query: 121 KGTATTQRNFKKERRKKNKESVAGESSVGKGKKMKEASESVQQESSRDGNGQEEEGEERG 180
           KGTA+ QRNFKKERRKKNKESVA ESSVGKGK MKEASESVQQESSRDGNGQ+ EGEERG
Sbjct: 121 KGTASKQRNFKKERRKKNKESVAAESSVGKGK-MKEASESVQQESSRDGNGQKAEGEERG 180

Query: 181 SVSRFVSFVGEKIWSAWG 198
           SVSRFVSFVGEKIWSAWG
Sbjct: 181 SVSRFVSFVGEKIWSAWG 197

[Close]

BLAST of Cp4.1LG10g10080 vs. NCBI nr
Match: XP_038882712.1 (uncharacterized protein LOC120073876 [Benincasa hispida])

HSP 1 Score: 309 bits (792), Expect = 1.24e-104
Identity = 162/203 (79.80%), Postives = 175/203 (86.21%), Query Frame = 0


Query: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVVLSADDKEVLAYLISCSNTSASLSNLS 60
           MKKLCRK+TVHPSPPIISDFLSFLPAAIF LTV LSADDKEVLAYLISCSNT+ASLSNLS
Sbjct: 1   MKKLCRKSTVHPSPPIISDFLSFLPAAIFALTVALSADDKEVLAYLISCSNTTASLSNLS 60

Query: 61  STRKSGRKPTAGKVGVDHAPIFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKS 120
            +RK+ RK  AGKVGVDHAPIFDCDCFMCYRRYWARWDSSPNRQLIHEII+AYEDGL KS
Sbjct: 61  GSRKNARKIAAGKVGVDHAPIFDCDCFMCYRRYWARWDSSPNRQLIHEIIDAYEDGLTKS 120

Query: 121 KGTATTQRNFKKERRKKNKESVAGESSVGKGKKMKEASESVQQESSRDGNGQEEE----- 180
           K T +TQRN KKERRKKN ES +GESS+GKGK  +  S+SVQQ++ R  N +EEE     
Sbjct: 121 KATTSTQRNCKKERRKKNNESASGESSLGKGKTNEVLSDSVQQDTGRQRNEKEEEEEKEE 180

Query: 181 GEERGSVSRFVSFVGEKIWSAWG 198
           G ERGSV RFVSFVGEKIW AWG
Sbjct: 181 GAERGSVRRFVSFVGEKIWGAWG 203

[Close]

BLAST of Cp4.1LG10g10080 vs. NCBI nr
Match: TYK13010.1 (uncharacterized protein E5676_scaffold255G006090 [Cucumis melo var. makuwa])

HSP 1 Score: 296 bits (758), Expect = 1.86e-99
Identity = 158/204 (77.45%), Postives = 172/204 (84.31%), Query Frame = 0


Query: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVVLSADDKEVLAYLISCSNTSASLSNLS 60
           MKKLCRK+TVHPSPPIISDFLSFLPAAIF LTV LSADDKEVLAYLISCSN++AS SNLS
Sbjct: 1   MKKLCRKSTVHPSPPIISDFLSFLPAAIFALTVALSADDKEVLAYLISCSNSTASFSNLS 60

Query: 61  STRKSGRKPTAGKVGVDHAPIFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKS 120
            +RK+GRK  A KVG+DHAP+FDCDCFMCYRRYWARWDSSPNRQLIHEII+AYEDGL KS
Sbjct: 61  GSRKNGRKIAAVKVGIDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIDAYEDGLTKS 120

Query: 121 KGTATTQRNFKKERRKKNKESVAGESSVGKGKKMKEASESVQQESSRDGNGQEEE----- 180
           K T +TQRN KKERRKKN ES  GESS+GKGK  +   +SVQ E+ R  N +EEE     
Sbjct: 121 KATTSTQRNCKKERRKKNNESGNGESSLGKGKTNEVLLDSVQ-ETGRQRNEKEEEEEDEE 180

Query: 181 -GEERGSVSRFVSFVGEKIWSAWG 198
            GEERGSV RFVSFVGEKIW AWG
Sbjct: 181 GGEERGSVRRFVSFVGEKIWGAWG 203

[Close]

BLAST of Cp4.1LG10g10080 vs. ExPASy TrEMBL
Match: A0A6J1IPN3 (uncharacterized protein LOC111478801 OS=Cucurbita maxima OX=3661 GN=LOC111478801 PE=4 SV=1)

HSP 1 Score: 360 bits (923), Expect = 5.30e-125
Identity = 187/198 (94.44%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVVLSADDKEVLAYLISCSNTSASLSNLS 60
           MKKLCRKNTVHPSPPIISDFLSFLPA IFTLTV LSADDKEVLAYLISCSNTSASLSNLS
Sbjct: 1   MKKLCRKNTVHPSPPIISDFLSFLPAVIFTLTVALSADDKEVLAYLISCSNTSASLSNLS 60

Query: 61  STRKSGRKPTAGKVGVDHAPIFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKS 120
            TRKSGRKPTAGKVGVDHAP+FDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAK 
Sbjct: 61  DTRKSGRKPTAGKVGVDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKP 120

Query: 121 KGTATTQRNFKKERRKKNKESVAGESSVGKGKKMKEASESVQQESSRDGNGQEEEGEERG 180
           KGTA+ QRNFKKERRKKNKESVA ESSVGKGK MKEASESVQQESSRDGNGQ+ EGEERG
Sbjct: 121 KGTASKQRNFKKERRKKNKESVAAESSVGKGK-MKEASESVQQESSRDGNGQKAEGEERG 180

Query: 181 SVSRFVSFVGEKIWSAWG 198
           SVSRFVSFVGEKIWSAWG
Sbjct: 181 SVSRFVSFVGEKIWSAWG 197

[Close]

BLAST of Cp4.1LG10g10080 vs. ExPASy TrEMBL
Match: A0A5D3CNJ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006090 PE=4 SV=1)

HSP 1 Score: 296 bits (758), Expect = 9.01e-100
Identity = 158/204 (77.45%), Postives = 172/204 (84.31%), Query Frame = 0


Query: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVVLSADDKEVLAYLISCSNTSASLSNLS 60
           MKKLCRK+TVHPSPPIISDFLSFLPAAIF LTV LSADDKEVLAYLISCSN++AS SNLS
Sbjct: 1   MKKLCRKSTVHPSPPIISDFLSFLPAAIFALTVALSADDKEVLAYLISCSNSTASFSNLS 60

Query: 61  STRKSGRKPTAGKVGVDHAPIFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKS 120
            +RK+GRK  A KVG+DHAP+FDCDCFMCYRRYWARWDSSPNRQLIHEII+AYEDGL KS
Sbjct: 61  GSRKNGRKIAAVKVGIDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIDAYEDGLTKS 120

Query: 121 KGTATTQRNFKKERRKKNKESVAGESSVGKGKKMKEASESVQQESSRDGNGQEEE----- 180
           K T +TQRN KKERRKKN ES  GESS+GKGK  +   +SVQ E+ R  N +EEE     
Sbjct: 121 KATTSTQRNCKKERRKKNNESGNGESSLGKGKTNEVLLDSVQ-ETGRQRNEKEEEEEDEE 180

Query: 181 -GEERGSVSRFVSFVGEKIWSAWG 198
            GEERGSV RFVSFVGEKIW AWG
Sbjct: 181 GGEERGSVRRFVSFVGEKIWGAWG 203

[Close]

BLAST of Cp4.1LG10g10080 vs. ExPASy TrEMBL
Match: A0A1S3B0U5 (uncharacterized protein LOC103484646 OS=Cucumis melo OX=3656 GN=LOC103484646 PE=4 SV=1)

HSP 1 Score: 296 bits (757), Expect = 1.28e-99
Identity = 158/204 (77.45%), Postives = 172/204 (84.31%), Query Frame = 0


Query: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVVLSADDKEVLAYLISCSNTSASLSNLS 60
           MKKLCRK+TVHPSPPIISDFLSFLPAAIF LTV LSADDKEVLAYLISCSN++AS SNLS
Sbjct: 1   MKKLCRKSTVHPSPPIISDFLSFLPAAIFALTVALSADDKEVLAYLISCSNSTASFSNLS 60

Query: 61  STRKSGRKPTAGKVGVDHAPIFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKS 120
            +RK+GRK  A KVG+DHAP+FDCDCFMCYRRYWARWDSSPNRQLIHEII+AYEDGL KS
Sbjct: 61  GSRKNGRKIAALKVGIDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIDAYEDGLTKS 120

Query: 121 KGTATTQRNFKKERRKKNKESVAGESSVGKGKKMKEASESVQQESSRDGNGQEEE----- 180
           K T +TQRN KKERRKKN ES  GESS+GKGK  +   +SVQ E+ R  N +EEE     
Sbjct: 121 KATTSTQRNCKKERRKKNNESGNGESSLGKGKTNEVLLDSVQ-ETGRQRNEKEEEEEEEE 180

Query: 181 -GEERGSVSRFVSFVGEKIWSAWG 198
            GEERGSV RFVSFVGEKIW AWG
Sbjct: 181 GGEERGSVRRFVSFVGEKIWGAWG 203

[Close]

BLAST of Cp4.1LG10g10080 vs. ExPASy TrEMBL
Match: A0A0A0KMY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511820 PE=4 SV=1)

HSP 1 Score: 295 bits (756), Expect = 1.82e-99
Identity = 159/204 (77.94%), Postives = 172/204 (84.31%), Query Frame = 0


Query: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVVLSADDKEVLAYLISCSNTSASLSNLS 60
           MKKLCRK+TVHPSPPIISDFLSFLPAAIF LT+ LSADDKEVLAYLISCSN++ASLSNLS
Sbjct: 1   MKKLCRKSTVHPSPPIISDFLSFLPAAIFALTLALSADDKEVLAYLISCSNSTASLSNLS 60

Query: 61  STRKSGRKPTAGKVGVDHAPIFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKS 120
             RK+GRK  A KVGVDHAP+FDCDCFMCYRRYWARWDSSPNRQLIHEII+AYEDGL KS
Sbjct: 61  GGRKNGRKIAALKVGVDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIDAYEDGLTKS 120

Query: 121 KGTATTQRNFKKERRKKNKESVAGESSVGKGKKMKEASESVQQESSRDGNGQEEE----- 180
           K T +TQRN KKERRKKN ES +GESS GKGK  +   +SVQ E+ R  N +EEE     
Sbjct: 121 KATTSTQRNCKKERRKKNNESGSGESSSGKGKTNEVLLDSVQ-ETGRQRNEKEEEEEEEG 180

Query: 181 -GEERGSVSRFVSFVGEKIWSAWG 198
            GEERGSV RFVSFVGEKIW AWG
Sbjct: 181 EGEERGSVRRFVSFVGEKIWGAWG 203

[Close]

BLAST of Cp4.1LG10g10080 vs. ExPASy TrEMBL
Match: A0A6J1EKS6 (uncharacterized protein LOC111433506 OS=Cucurbita moschata OX=3662 GN=LOC111433506 PE=4 SV=1)

HSP 1 Score: 271 bits (692), Expect = 7.64e-90
Identity = 151/204 (74.02%), Postives = 161/204 (78.92%), Query Frame = 0


Query: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVVLSADDKEVLAYLISCSNTSASLSNLS 60
           MKKLCRK++VHPS PIISDFLSFLPA IF LTV LSADDKEVLAYLI+CSNTS       
Sbjct: 1   MKKLCRKSSVHPSTPIISDFLSFLPATIFALTVALSADDKEVLAYLIACSNTS------- 60

Query: 61  STRKSGRKPTAGKVGVDHAPIFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKS 120
             RK+ RK  +GK GVDHAP+FDCDCFMCYRRYW RWDSSPNRQLIHE+IEAYEDGLAKS
Sbjct: 61  -NRKAARKIPSGKSGVDHAPLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYEDGLAKS 120

Query: 121 KGTATTQRNFKKERRKKNKESVAGESS-----VGKGKKMKEASESVQQESSRDGNGQEEE 180
           K  AT+QRN KKERRKK  ES   ES+     VGK  KM E S  VQQESSRD N +EEE
Sbjct: 121 KAAATSQRNCKKERRKKKNESGPDESNRSESRVGK-VKMNETSGCVQQESSRDSNRKEEE 180

Query: 181 GE-ERGSVSRFVSFVGEKIWSAWG 198
            E ERGSV RFVSFVGEKIW AWG
Sbjct: 181 EEGERGSVRRFVSFVGEKIWGAWG 195

[Close]

BLAST of Cp4.1LG10g10080 vs. TAIR 10
Match: AT1G62422.1 (unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 152.5 bits (384), Expect = 3.5e-37
Identity = 94/206 (45.63%), Postives = 124/206 (60.19%), Query Frame = 0


Query: 1   MKKLCRKNTVHPSPP--IISD--FLSFLPAAIFTLTVVLSADDKEVLAYLISCSNTSASL 60
           MKKLCRK TVHPSPP  I +D  FLS LP AI +L   LS +D+EVLAYLIS S  S  +
Sbjct: 1   MKKLCRKGTVHPSPPPAIKTDEQFLSLLPVAILSLVAALSVEDREVLAYLISNSGDSNRI 60

Query: 61  SNLSSTRKSGRKPTAGKVGVDHAPIFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDG 120
           S L   ++             H+P+F CDCF CY  YW RWD+SP RQLIHEII+AYED 
Sbjct: 61  SRLKKNKEDNH----------HSPLFLCDCFSCYTSYWVRWDTSPRRQLIHEIIDAYEDS 120

Query: 121 LAKSKGTATTQRNFKKERRKKNKESVAGESSVGKGKKMKEASESVQ---QESSRDGN-GQ 180
           L   K         KK+RRK++ ++    +S+G  +  +  S S +    +S +DGN G 
Sbjct: 121 LEMKKK--------KKDRRKRSGKASGRVNSIGTSRLSELGSSSAEFAGGDSEKDGNCGG 180

Query: 181 EEEGEERGSVSRFVSFVGEKIWSAWG 199
           EE  +E+GSV + +SF+G++    WG
Sbjct: 181 EEAEKEKGSVGKVMSFIGQRFLGVWG 188

[Close]

BLAST of Cp4.1LG10g10080 vs. TAIR 10
Match: AT1G12020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62422.1); Has 89 Blast hits to 88 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 144.1 bits (362), Expect = 1.2e-34
Identity = 97/229 (42.36%), Postives = 127/229 (55.46%), Query Frame = 0


Query: 1   MKKLCRKNTVHPSPPIISD---FLSFLPAAIFTLTVVLSADDKEVLAYLISCSNTSASLS 60
           MKKL RK TVHPSPP I      L+ LP AIF+L  VLS +D+EVLAYLIS ++ S   +
Sbjct: 1   MKKLYRKGTVHPSPPQIKSNDHLLTLLPVAIFSLAAVLSPEDREVLAYLISTASYSGERN 60

Query: 61  NLSSTRKSGRKPTAGKVGVDHAPIFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGL 120
             S   K+  K     +  +H+P+F CDCF CY  YW RWDSSP+RQLIHEII+A+ED L
Sbjct: 61  PTSRLNKT--KAHKKALFDNHSPLFHCDCFSCYTSYWVRWDSSPSRQLIHEIIDAFEDSL 120

Query: 121 AKSKGTATTQRNFKKERRKKNKES----VAGESSVGKGKKMKEASESV--------QQES 180
            K+K         KK+RRK++ +S     +   S    +      ESV          E 
Sbjct: 121 EKNKNKKKNVTG-KKDRRKRSGKSSSLLASSSFSTDDSEIPSRLGESVVNSCPCTSSSEL 180

Query: 181 SRDGNG----------------QEEEGEERGSVSRFVSFVGEKIWSAWG 199
           ++DG G                 E+  EE+G+V RFVSF+GEK++  WG
Sbjct: 181 TQDGGGCSGGLEPMEFFCAGDACEKVEEEKGTVRRFVSFIGEKVFGVWG 226

[Close]

BLAST of Cp4.1LG10g10080 vs. TAIR 10
Match: AT5G13090.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 105.9 bits (263), Expect = 3.7e-23
Identity = 64/155 (41.29%), Postives = 86/155 (55.48%), Query Frame = 0


Query: 3   KLCRKNTVHPSPP--------------------IISDFLSFLPAAIFTLTVVLSADDKEV 62
           K+ +K  V+PSPP                         L  LPA I  L  VLS++++EV
Sbjct: 2   KMKKKGKVYPSPPPPPQSSSSSSSSNHLNEEDDDSLSVLKLLPATILVLVSVLSSEEREV 61

Query: 63  LAYLISCSNTSASLSNLSSTRKSGRKPTAGKVGVDH-APIFDCDCFMCYRRYWARWDSSP 122
           LAYLI+   T +   N SS  K+ +K  + K   +H  P+FDC+CF CY  YW RWDSSP
Sbjct: 62  LAYLITRGTTISDRGNSSSKNKTKKK--SNKSSKNHKPPVFDCECFDCYTNYWFRWDSSP 121

Query: 123 NRQLIHEIIEAYED--GLAKSKGTATTQRNFKKER 135
           NR+LIHEIIEA+E+  G   S   + ++R  KKE+
Sbjct: 122 NRELIHEIIEAFENHHGEENSASRSKSKRGKKKEK 154

[Close]

BLAST of Cp4.1LG10g10080 vs. TAIR 10
Match: AT1G24270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13090.1); Has 84 Blast hits to 83 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 98.2 bits (243), Expect = 7.8e-21
Identity = 62/145 (42.76%), Postives = 85/145 (58.62%), Query Frame = 0


Query: 3   KLCRKNTVHPSPPIIS-------DFLS---FLPAAIFTLTVVLSADDKEVLAYLISCSNT 62
           K+ +K  VHPSPP+ S       D LS    L +AI  L  VLSA+D EVLAYLI+ S  
Sbjct: 56  KVMKKGKVHPSPPLPSSSSSNGDDSLSVFKLLQSAILVLVSVLSAEDLEVLAYLITRSLN 115

Query: 63  SASLSNLSSTRKSGRKPTAGKVGVDHAPIFDCDCFMCYRRYWARWDSSPNRQLIHEIIEA 122
           + ++  +S  +K   K          AP+ DC CF CY  YW++WDSS NR+LI++IIEA
Sbjct: 116 TTNV--VSCKKKRSHK----------APLLDCQCFDCYTSYWSKWDSSSNRELINQIIEA 175

Query: 123 YEDGLAKSKGTATTQRNFKKERRKK 138
           +ED L + + +A+      K+R KK
Sbjct: 176 FEDHLTRDEISASHTSKKNKKRAKK 188

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g10080 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG10g10080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023544435.1	5.68e-134	100.00	uncharacterized protein LOC111804018 [Cucurbita pepo subsp. pepo]	[more]
KAG7033980.1	3.55e-130	97.98	hypothetical protein SDJN02_03706, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022979041.1	1.09e-124	94.44	uncharacterized protein LOC111478801 [Cucurbita maxima]	[more]
XP_038882712.1	1.24e-104	79.80	uncharacterized protein LOC120073876 [Benincasa hispida]	[more]
TYK13010.1	1.86e-99	77.45	uncharacterized protein E5676_scaffold255G006090 [Cucumis melo var. makuwa]	[more]

BLAST of Cp4.1LG10g10080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IPN3	5.30e-125	94.44	uncharacterized protein LOC111478801 OS=Cucurbita maxima OX=3661 GN=LOC111478801...	[more]
A0A5D3CNJ0	9.01e-100	77.45	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B0U5	1.28e-99	77.45	uncharacterized protein LOC103484646 OS=Cucumis melo OX=3656 GN=LOC103484646 PE=...	[more]
A0A0A0KMY4	1.82e-99	77.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511820 PE=4 SV=1	[more]
A0A6J1EKS6	7.64e-90	74.02	uncharacterized protein LOC111433506 OS=Cucurbita moschata OX=3662 GN=LOC1114335...	[more]

BLAST of Cp4.1LG10g10080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62422.1	3.5e-37	45.63	unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth ...	[more]
AT1G12020.1	1.2e-34	42.36	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G13090.1	3.7e-23	41.29	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G24270.1	7.8e-21	42.76	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..182
None	No IPR available	PANTHER	PTHR31903:SF6	F12F1.11-RELATED	coord: 1..198
None	No IPR available	PANTHER	PTHR31903	F12F1.11-RELATED	coord: 1..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g10080.1	Cp4.1LG10g10080.1	mRNA