Cp4.1LG10g05230 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CACTTGAAGAAAAAGATACCCAAAATCAAAACAAAAACAATTGCTCAACTTTCCCCTTCTGCAATCATTTCCATTTTCGATCACTTTCCTTTCGGTTCCAAGTGGTTGGAGTTTGTTGCTTTCTCTGCTCCTCTCCTCTCTCTTTTTGTACCATTGTATGTCCTTTAAAACCCATCCATTACACAACGAAGCCTTCAGCGCAAACCATGAACACCGCCAGGTTTATCAAATGCGTCACCGTCGGGGACGGCGCCGTCGGGAAGACTTGTATGCTCATTTCTTACACCACCAACACTTTTCCCACGGTACCCATTTCCCATTTCCCTATTTCAAATAATGGGTTTCGCTTCTTTTCCTTTTTTCATTCGTTCTTGTTCGTAGGATTATGTTCCGACCGTGTTCGATAACTTCAGCGCCAATGTGGTAGCCGACGGCAGCACTGTCAATCTTGGCTTATGGGACACTGCCGGACAGGAAGATTACAACAGACTGAGGCCTCTGAGTTACAGAGGAGCTGATGTCTTCCTATTGTCGTTTTCTCTCATCAGCAAACCCAGTTACGAGAACATCTTTAAGAAGGTAATTTAAATTCTTTCAAATTTCCCATTATGTCATAAAGGTAAGCCCTCTTCCTTTATGTTGCAGTGGATTCCTGAACTTAAACATTACGCTCCAAACGTCCCCATCGTTCTGGTTGGGACTAAGCTTGGTAAGAACTCCTTAACTTCACACCATTAACCCGCAAATTGAGTGAATTATGGTAACATTCAACGAAATCAACAACTTGCAGATCTACGAGACGACAGGCAGTATCTGATTGATCATCCAACCGCAACACCCATAACCACAGCTGAGGTAAAGAAATTAATCACTTAAAAAAACTGGATTCTGTTTTTGGGTTTGTTGATTGGACTGAAGGTTGTTCTTCAGGGCGAGGAACTGAGGCGGATGATCGGGGGAATTACATACATTGAATGCAGCTCCAAAACCCAAAAGGTATAGAGATTGATCCATAAAGGCCAGACCCTAACTAAATTGAATCTTTCCCTTTATAAACTCGTATTCATTTTTCAAATTAATCGATGTGGGACTCTGTCCTAACCATCCTCACCATTGAATTCTTTTTTGGGTGCAGAACGTTAAGAATGTATTTGATGCAGCAATAAAGGTAGCATTGAGGCCTCCACGACCAAAGAAGAAGCCTTGCAAGCAGAGGACTTGTGCTTTGCTTTGA CACTTGAAGAAAAAGATACCCAAAATCAAAACAAAAACAATTGCTCAACTTTCCCCTTCTGCAATCATTTCCATTTTCGATCACTTTCCTTTCGGTTCCAAGTGGTTGGAGTTTGTTGCTTTCTCTGCTCCTCTCCTCTCTCTTTTTGTACCATTGTATGTCCTTTAAAACCCATCCATTACACAACGAAGCCTTCAGCGCAAACCATGAACACCGCCAGGTTTATCAAATGCGTCACCGTCGGGGACGGCGCCGTCGGGAAGACTTGTATGCTCATTTCTTACACCACCAACACTTTTCCCACGGATTATGTTCCGACCGTGTTCGATAACTTCAGCGCCAATGTGGTAGCCGACGGCAGCACTGTCAATCTTGGCTTATGGGACACTGCCGGACAGGAAGATTACAACAGACTGAGGCCTCTGAGTTACAGAGGAGCTGATGTCTTCCTATTGTCGTTTTCTCTCATCAGCAAACCCAGTTACGAGAACATCTTTAAGAAGTGGATTCCTGAACTTAAACATTACGCTCCAAACGTCCCCATCGTTCTGGTTGGGACTAAGCTTGATCTACGAGACGACAGGCAGTATCTGATTGATCATCCAACCGCAACACCCATAACCACAGCTGAGGTAGCATTGAGGCCTCCACGACCAAAGAAGAAGCCTTGCAAGCAGAGGACTTGTGCTTTGCTTTGA ATGAACACCGCCAGGTTTATCAAATGCGTCACCGTCGGGGACGGCGCCGTCGGGAAGACTTGTATGCTCATTTCTTACACCACCAACACTTTTCCCACGGATTATGTTCCGACCGTGTTCGATAACTTCAGCGCCAATGTGGTAGCCGACGGCAGCACTGTCAATCTTGGCTTATGGGACACTGCCGGACAGGAAGATTACAACAGACTGAGGCCTCTGAGTTACAGAGGAGCTGATGTCTTCCTATTGTCGTTTTCTCTCATCAGCAAACCCAGTTACGAGAACATCTTTAAGAAGTGGATTCCTGAACTTAAACATTACGCTCCAAACGTCCCCATCGTTCTGGTTGGGACTAAGCTTGATCTACGAGACGACAGGCAGTATCTGATTGATCATCCAACCGCAACACCCATAACCACAGCTGAGGTAGCATTGAGGCCTCCACGACCAAAGAAGAAGCCTTGCAAGCAGAGGACTTGTGCTTTGCTTTGA MNTARFIKCVTVGDGAVGKTCMLISYTTNTFPTDYVPTVFDNFSANVVADGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLSFSLISKPSYENIFKKWIPELKHYAPNVPIVLVGTKLDLRDDRQYLIDHPTATPITTAEVALRPPRPKKKPCKQRTCALL Homology
BLAST of Cp4.1LG10g05230 vs. ExPASy Swiss-Prot
Match: Q41253 (Rac-like GTP-binding protein RAC13 OS=Gossypium hirsutum OX=3635 GN=RAC13 PE=2 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 5.6e-78 Identity = 144/196 (73.47%), Postives = 158/196 (80.61%), Query Frame = 0
BLAST of Cp4.1LG10g05230 vs. ExPASy Swiss-Prot
Match: Q40220 (Rac-like GTP-binding protein RAC2 OS=Lotus japonicus OX=34305 GN=RAC2 PE=2 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 4.9e-74 Identity = 141/196 (71.94%), Postives = 151/196 (77.04%), Query Frame = 0
BLAST of Cp4.1LG10g05230 vs. ExPASy Swiss-Prot
Match: Q41254 (Rac-like GTP-binding protein RAC9 OS=Gossypium hirsutum OX=3635 GN=RAC9 PE=2 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 4.9e-74 Identity = 138/196 (70.41%), Postives = 154/196 (78.57%), Query Frame = 0
BLAST of Cp4.1LG10g05230 vs. ExPASy Swiss-Prot
Match: Q6Z7L8 (Rac-like GTP-binding protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC7 PE=2 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 3.9e-71 Identity = 137/197 (69.54%), Postives = 151/197 (76.65%), Query Frame = 0
BLAST of Cp4.1LG10g05230 vs. ExPASy Swiss-Prot
Match: Q38903 (Rac-like GTP-binding protein ARAC2 OS=Arabidopsis thaliana OX=3702 GN=ARAC2 PE=1 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 2.5e-70 Identity = 135/186 (72.58%), Postives = 144/186 (77.42%), Query Frame = 0
BLAST of Cp4.1LG10g05230 vs. NCBI nr
Match: XP_023544294.1 (rac-like GTP-binding protein RAC13 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 319 bits (818), Expect = 2.58e-109 Identity = 163/196 (83.16%), Postives = 163/196 (83.16%), Query Frame = 0
BLAST of Cp4.1LG10g05230 vs. NCBI nr
Match: XP_022925841.1 (rac-like GTP-binding protein RAC13 [Cucurbita moschata] >KAG6581340.1 Rac-like GTP-binding protein 7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034624.1 Rac-like GTP-binding protein 7 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 312 bits (800), Expect = 1.48e-106 Identity = 161/197 (81.73%), Postives = 162/197 (82.23%), Query Frame = 0
BLAST of Cp4.1LG10g05230 vs. NCBI nr
Match: KAB5534061.1 (hypothetical protein DKX38_017147 [Salix brachista] >KAB5534074.1 hypothetical protein DKX38_017160 [Salix brachista]) HSP 1 Score: 291 bits (746), Expect = 1.55e-98 Identity = 146/183 (79.78%), Postives = 155/183 (84.70%), Query Frame = 0
BLAST of Cp4.1LG10g05230 vs. NCBI nr
Match: XP_034932397.1 (rac-like GTP-binding protein RAC13 [Populus alba] >XP_034932398.1 rac-like GTP-binding protein RAC13 [Populus alba] >TKS02808.1 RAC-like GTP binding protein ARAC2 [Populus alba]) HSP 1 Score: 291 bits (745), Expect = 3.44e-98 Identity = 147/196 (75.00%), Postives = 157/196 (80.10%), Query Frame = 0
BLAST of Cp4.1LG10g05230 vs. NCBI nr
Match: XP_022926975.1 (rac-like GTP-binding protein RAC13 [Cucurbita moschata] >XP_023003127.1 rac-like GTP-binding protein RAC13 [Cucurbita maxima] >XP_023517161.1 rac-like GTP-binding protein RAC13 [Cucurbita pepo subsp. pepo] >KAG6594570.1 Rac-like GTP-binding protein 7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026543.1 Rac-like GTP-binding protein 7 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 291 bits (744), Expect = 5.06e-98 Identity = 151/197 (76.65%), Postives = 158/197 (80.20%), Query Frame = 0
BLAST of Cp4.1LG10g05230 vs. ExPASy TrEMBL
Match: A0A6J1ED98 (rac-like GTP-binding protein RAC13 OS=Cucurbita moschata OX=3662 GN=LOC111433128 PE=3 SV=1) HSP 1 Score: 312 bits (800), Expect = 7.16e-107 Identity = 161/197 (81.73%), Postives = 162/197 (82.23%), Query Frame = 0
BLAST of Cp4.1LG10g05230 vs. ExPASy TrEMBL
Match: A0A5N5KUG7 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_017147 PE=3 SV=1) HSP 1 Score: 291 bits (746), Expect = 7.49e-99 Identity = 146/183 (79.78%), Postives = 155/183 (84.70%), Query Frame = 0
BLAST of Cp4.1LG10g05230 vs. ExPASy TrEMBL
Match: A0A6M2EZM8 (Uncharacterized protein OS=Populus davidiana OX=266767 PE=3 SV=1) HSP 1 Score: 291 bits (745), Expect = 1.67e-98 Identity = 147/196 (75.00%), Postives = 157/196 (80.10%), Query Frame = 0
BLAST of Cp4.1LG10g05230 vs. ExPASy TrEMBL
Match: A0A4U5PYV4 (RAC-like GTP binding protein ARAC2 OS=Populus alba OX=43335 GN=D5086_0000159400 PE=3 SV=1) HSP 1 Score: 291 bits (745), Expect = 1.67e-98 Identity = 147/196 (75.00%), Postives = 157/196 (80.10%), Query Frame = 0
BLAST of Cp4.1LG10g05230 vs. ExPASy TrEMBL
Match: A0A6J1KLK2 (rac-like GTP-binding protein RAC13 OS=Cucurbita maxima OX=3661 GN=LOC111496833 PE=3 SV=1) HSP 1 Score: 291 bits (744), Expect = 2.45e-98 Identity = 151/197 (76.65%), Postives = 158/197 (80.20%), Query Frame = 0
BLAST of Cp4.1LG10g05230 vs. TAIR 10
Match: AT5G45970.1 (RAC-like 2 ) HSP 1 Score: 266.2 bits (679), Expect = 1.8e-71 Identity = 135/186 (72.58%), Postives = 144/186 (77.42%), Query Frame = 0
BLAST of Cp4.1LG10g05230 vs. TAIR 10
Match: AT3G51300.1 (RHO-related protein from plants 1 ) HSP 1 Score: 265.4 bits (677), Expect = 3.0e-71 Identity = 133/197 (67.51%), Postives = 150/197 (76.14%), Query Frame = 0
BLAST of Cp4.1LG10g05230 vs. TAIR 10
Match: AT2G17800.1 (Arabidopsis RAC-like 1 ) HSP 1 Score: 264.6 bits (675), Expect = 5.2e-71 Identity = 133/197 (67.51%), Postives = 150/197 (76.14%), Query Frame = 0
BLAST of Cp4.1LG10g05230 vs. TAIR 10
Match: AT2G17800.2 (Arabidopsis RAC-like 1 ) HSP 1 Score: 264.6 bits (675), Expect = 5.2e-71 Identity = 133/197 (67.51%), Postives = 150/197 (76.14%), Query Frame = 0
BLAST of Cp4.1LG10g05230 vs. TAIR 10
Match: AT4G35950.1 (RAC-like 6 ) HSP 1 Score: 262.3 bits (669), Expect = 2.6e-70 Identity = 132/197 (67.01%), Postives = 149/197 (75.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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