Cp4.1LG10g02000 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG10g02000
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG10: 2949031 .. 2953256 (+)
RNA-Seq ExpressionCp4.1LG10g02000
SyntenyCp4.1LG10g02000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACCGCTAAAATAACCCTTTCCTCCCTTTTTCCCACTGCCATTTCTCCTCTCTCTCCCTCTTTTCCCTCTCCTTAGATGAAACTACGCACAATAACTAACCAAACCCAAAAAAGGGGAAAATTAATTTTAAGATCCAAGATCTGGACTTTCAGACACTAAATGCTGCTGCTTTCCTTCTTCTCTTATCTGATCTAAGGTGATTTTTCCAGATCCCATCAAGTTTCTGTTACCTGTGCGTTTGTTTCCTTTATCCATTCTTTTATCTCAATCTCTGTAGTTTGTTCACAACTTGAAAGGTTTCTGCTGCCTTTCTATTTGTCTCTTGATACTGGGGGTGAAACACATCGACCCACAATGCTACATTACATCGATCTATGTGCTTCTTTCAGTTTCCAGTATGACATTGCATTGTTTTGCACGAATGGTGTTTGTTTTTCCCCCCCTTCAATCGTGGGCTAAATTTGCTTCGTTTTTTTAACCTTCTCGGATTTTACTTTCTGGGTTTTAAATCTATGAAATTATAGGTTATAAATATGTGTTCTGTATGGAGGCCATAGATGATGATTTGAAAATTAGATTGAGCTGTGCAGTTCGTGTTGTTTGCTGATTTAGTTTTGGAAGTTTACTCTTGAAATTTGCATCCTTTTGATTTACTCGATTTTGATGGGTGGGTGCTGGAAGTGGGGGATAAATAGACATGAGTGGCCACAGACATCTAGTGTCTGGAAATTCCCTCATGGGTTTCATTCTAGTGTCGGTGGCTTTCTGTAACAAGTTGCTACTTTCAGGAGAATGATTTTTTGAACTGAATTTTGGTTCCATGGAATCAGATTGTCTATTTAATGGACATGCAATCTTACTACCGGTTGTTTATGTTTTCATCAAATGCAGAATCATATTCTTTTGAACTATTAATCATGCAAAGGAGGCAACCTACTTCCACGCGCCGCAATGGAAGCTTTCCATTTGCTGGGGCTCTAAACGCGAAATCAAAATCATCTCCCCTGTTATCTATTTGCCTGGTCCTTGTGGTAATTTTCATGATTAAGAATCAGTTTTCTTTCCTGATTTGTTTTATATTTCTTATCGTTTTCTATAGATTATTGCGGTGGCTGGATGATAATCCGTGATTTCCATAGTAACGTTACCACTCAGTAAAACATAATCCATTGGTATNCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGGGTTTTCACAGGGAGCAGTTCTTCTACTTGTCTATGCATTTAGTGGACCAGGTTTGTATTTGATTTACAATTTCTAGACTTCTCAATTCATGATATGTTTCCAAGTAGTTTCGGGTGTATACTTTGATTATAGTCGAAGAAATGAAAAATGGGGATTATTGTCTCATTCATTGAACAGCTATTTATCAATGCAGGTTCATTTGGAGGCAACAAGATAGTCAGCAAGATTGAAGGTAAATTAAGTTTTCCTTTGTAACCTCCTTGACGTATAGGGATCGGGCGTCTCTCCCTCTTTATCACCGTTTCGTGCAATGTTTGTCCCTTTGAGCATTCTTTGCTTTCTTTCACATCACAATCCTTTGTTTTTGAATCTATGCTTACTGAGCAATTGATAGGATATTTTCCTTTGGGTAAGATCGAAGATGAAATACTGCCCCCAACATTTTGCACTATATGAATAATGAAAGAAAAAACAACTTCATCCTTCATTGCTTGTAAACAGAGCACTCAGCAATTAAAACAGAACAGTAGCTTTGACACTTTCTTTGTACTTTATCTGCCATGTCTGAGCCTCCCAAACGAAGAATCCTTGTTGAGACATTTACTCTTTCTAGACATTTTATCTTCCATAAGCCGTTGATAAGTCCCTTGGGATCAAAGATTAAGGTGTGAATTCTTTGCCTGGGAAATGACCCGAGGAGCCCAATTTCCAAAGTCTACTATCTTTCTTCCCAACAACCCCTGGGGGTTGCAATTTTGTACTGTTTGTTTTCCTCCGTATCTTGATTCACTGGGGACAAATGATATCACATTCGTATTTCTTTTGTTTGTTCTTGATGGGTTATTTTTAACGAATTTGCATGGTAAAGGCTGTAATATTAAAGAACTTCTATGGTGGTTTGATGATCTCGATCAATTTTAGTTACAATGTGCAAATGCTTGCAACTTGTAAAATGTAACGATTTGATAGTTGATCCTGGTGATGCTTCTATAAGATTTGATTGCTTATATGAGCATTTACTGTCAAAATTGAACCTACAGGTGATTTTTCATGCACATTGGAGTTGTTGAAAGCAGTACCCATCTTAAAGAAAGCATATGGCGATAGTATGAACAAAGTTTTGCATGTTGGTCCGGATACCTGCTCTGTGGTATCCAAGCTATTGAAAGAAGGTGAAACAGAAGCATGGGGCATAGAACCATATGAAATTGAGGATGTCGATGGAAACTGCAAATCACTTGTGAACAAAGGCATTGTTCGTGTGGCGGATATCAAATTCCCTCTACCCTATAGAGCAAAGTCATTTTCTCACGTTATTGTGTCAGATGCAATGGATTACCTATCCCCCAAATACCTGAACAAAACTCTTCCGGAATTTGCAAGGGTTTCTTCTGATGGTCTTGTTATATTTTCTGGTAACTTTTTGAAAGCTCTATGCAACATCGTAAAGATTGCTTTCTATTGCATCATAATTTCATTACCAATCACTTTGTTTTAAATTCATCATTGGCAAATATTTTTTGAAGTGTATCTACTTCACTATGGAAACTCCACAATCGTGTGGTGAATGACCTCATTGAATGTTGGATGCTCTGCTCCTACTAAAAGTACAAGTTGGGTAGAGAGGATTTGAATCTAGGATGGAAAACTTAAGTCAACTAGGAATTTCCAGTTGAACCATCACTGTGGAGTAGAATTACTTTGTTTTGTGATAGAAGTAGCTACTACTGTTCAAATATTACACTTCTTTTCTTGACCCACAAGGAACCAATTGGAGAGTTCCTCTTAGCTGATTGTCATTATAGCAAGCATACATAATTATTTGGACTATAAATCTTGTGACCACGTTGTGGATACAGAGAAATATTTAATAAACTAGGAGTCTTCTCTATTGCATAACTTGTTTCTCCTTTTCTTCTTGCTAACAACATTTTGATGTCGGTCTTCATTATTTCTTATCCGACATTAATATCCTCTATTCGATAAAGGTCTGGTGACCTGTTACTCTCTCCTTTTTGTATAGGTTCACCTGGTCAGCAGAAAGCAAAAGTAAACGAGCTAACAAAGTTTGGACGGCCGGTAAGCTACTACTTATAGCATGTTATATGGATCTTATGTGTGCCATTTTTATTGTGTATGCTCATGCATAATTTTTTTTTGTGTTTTTCACATAAAATTATAAACAATATGGATAATGTGTAAATTCACGGATCTACTTGCTCGTGGAACAATAGTGAATGGACGAGCTCTTAAAACCAACTCCTATGGCTTTCATAACTGTAGTTTAAGTATGTTACAGCTTTAGCTGTAGACATCTATTGCACAATTTGTGCATGAATGAATCGTTAGGGAAAATTGCACATTGCCCTGCGCCTCCCCTCAATTAGGGATATCTGTTGTTCATTTAATTATTTTCTAAAATTACTTCAATCTTGAATTGGATGAGTTAAGGCCGTAAGTAAGTAGTTAGAGCATATTATTTAGGTGGTATACTTGAGAGGTGCATAATATGGTTGTGTGTGATTTCATTAATGTAATGGATGCATTACTTCATATTTGAAGGCCAAAATGAGGAGCTCGTCTTGGTGGATTCGATTTTTCACCCAAACAAGCTTAGAAGAGAACGAAGGCGCTGCCAAGAAATTTAAGCAAGCAGCATCCAAGCAGTCTTACAAGCCCGGCTGCCAAGTTTTCCATCTCAATTCATACCATTGATATCAAATCATAAGATATGAAATCATTTCTTACCCTCTTTTTTGTCTCTTTCTCTTGTCATTCTTATGTTATAAACAAACATAAAAGAAGCTAGACAGGTGGAGAATCAGCAATTGATGTACGCGTTTTTTTCCTTTTTCTTTTTCTTCTTTGGGTGGTGGGATTGGGGAAATGTCATTGGCACAATATTGTCAACACGGGAGACTTTAGTGTTCTCAAGGTTACTATATATATATATATATATTAATTATTTTTATTTAACGAGATGAATACTACTGATGGTCCTATCGTTTTGTA

mRNA sequence

CAACCGCTAAAATAACCCTTTCCTCCCTTTTTCCCACTGCCATTTCTCCTCTCTCTCCCTCTTTTCCCTCTCCTTAGATGAAACTACGCACAATAACTAACCAAACCCAAAAAAGGGGAAAATTAATTTTAAGATCCAAGATCTGGACTTTCAGACACTAAATGCTGCTGCTTTCCTTCTTCTCTTATCTGATCTAAGAATCATATTCTTTTGAACTATTAATCATGCAAAGGAGGCAACCTACTTCCACGCGCCGCAATGGAAGCTTTCCATTTGCTGGGGCTCTAAACGCGAAATCAAAATCATCTCCCCTGTTATCTATTTGCCTGGTCCTTGTGGGAGCAGTTCTTCTACTTGTCTATGCATTTAGTGGACCAGGTTCATTTGGAGGCAACAAGATAGTCAGCAAGATTGAAGGTGATTTTTCATGCACATTGGAGTTGTTGAAAGCAGTACCCATCTTAAAGAAAGCATATGGCGATAGTATGAACAAAGTTTTGCATGTTGGTCCGGATACCTGCTCTGTGGTATCCAAGCTATTGAAAGAAGGTGAAACAGAAGCATGGGGCATAGAACCATATGAAATTGAGGATGTCGATGGAAACTGCAAATCACTTGTGAACAAAGGCATTGTTCGTGTGGCGGATATCAAATTCCCTCTACCCTATAGAGCAAAGTCATTTTCTCACGTTATTGTGTCAGATGCAATGGATTACCTATCCCCCAAATACCTGAACAAAACTCTTCCGGAATTTGCAAGGGTTTCTTCTGATGGTCTTGTTATATTTTCTGGTTCACCTGGTCAGCAGAAAGCAAAAGTAAACGAGCTAACAAAGTTTGGACGGCCGGCCAAAATGAGGAGCTCGTCTTGGTGGATTCGATTTTTCACCCAAACAAGCTTAGAAGAGAACGAAGGCGCTGCCAAGAAATTTAAGCAAGCAGCATCCAAGCAGTCTTACAAGCCCGGCTGCCAAGTTTTCCATCTCAATTCATACCATTGATATCAAATCATAAGATATGAAATCATTTCTTACCCTCTTTTTTGTCTCTTTCTCTTGTCATTCTTATGTTATAAACAAACATAAAAGAAGCTAGACAGGTGGAGAATCAGCAATTGATGTACGCGTTTTTTTCCTTTTTCTTTTTCTTCTTTGGGTGGTGGGATTGGGGAAATGTCATTGGCACAATATTGTCAACACGGGAGACTTTAGTGTTCTCAAGGTTACTATATATATATATATATATTAATTATTTTTATTTAACGAGATGAATACTACTGATGGTCCTATCGTTTTGTA

Coding sequence (CDS)

ATGCAAAGGAGGCAACCTACTTCCACGCGCCGCAATGGAAGCTTTCCATTTGCTGGGGCTCTAAACGCGAAATCAAAATCATCTCCCCTGTTATCTATTTGCCTGGTCCTTGTGGGAGCAGTTCTTCTACTTGTCTATGCATTTAGTGGACCAGGTTCATTTGGAGGCAACAAGATAGTCAGCAAGATTGAAGGTGATTTTTCATGCACATTGGAGTTGTTGAAAGCAGTACCCATCTTAAAGAAAGCATATGGCGATAGTATGAACAAAGTTTTGCATGTTGGTCCGGATACCTGCTCTGTGGTATCCAAGCTATTGAAAGAAGGTGAAACAGAAGCATGGGGCATAGAACCATATGAAATTGAGGATGTCGATGGAAACTGCAAATCACTTGTGAACAAAGGCATTGTTCGTGTGGCGGATATCAAATTCCCTCTACCCTATAGAGCAAAGTCATTTTCTCACGTTATTGTGTCAGATGCAATGGATTACCTATCCCCCAAATACCTGAACAAAACTCTTCCGGAATTTGCAAGGGTTTCTTCTGATGGTCTTGTTATATTTTCTGGTTCACCTGGTCAGCAGAAAGCAAAAGTAAACGAGCTAACAAAGTTTGGACGGCCGGCCAAAATGAGGAGCTCGTCTTGGTGGATTCGATTTTTCACCCAAACAAGCTTAGAAGAGAACGAAGGCGCTGCCAAGAAATTTAAGCAAGCAGCATCCAAGCAGTCTTACAAGCCCGGCTGCCAAGTTTTCCATCTCAATTCATACCATTGA

Protein sequence

MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIVSKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYEIEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARVSSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAASKQSYKPGCQVFHLNSYH
Homology
[Close]
BLAST of Cp4.1LG10g02000 vs. ExPASy Swiss-Prot
Match: Q0WPN7 (Probable pectin methylesterase CGR3 OS=Arabidopsis thaliana OX=3702 GN=CGR3 PE=2 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 5.7e-109
Identity = 189/258 (73.26%), Postives = 222/258 (86.05%), Query Frame = 0 

Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV 60
           M RRQ      +GSFPF GAL++KS+SSPLLS+CLVLVGA LL+ YA+SGPG F   + V
Sbjct: 1   MSRRQVRRVGDSGSFPFVGALHSKSRSSPLLSVCLVLVGACLLIGYAYSGPGMFKSIREV 60

Query: 61  SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE 120
           SKI GD+SCT E+ +A+PILK AYGDSM KVLHVGP+TCSVVS LL E ETEAWG+EPY+
Sbjct: 61  SKITGDYSCTAEVQRAIPILKSAYGDSMRKVLHVGPETCSVVSSLLNEEETEAWGVEPYD 120

Query: 121 IEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV 180
           +ED D NCKSL++KG+VRVADIKFPLPYR+KSFS VIVSDA+DYLSP+YLNKT+PE ARV
Sbjct: 121 VEDADSNCKSLLHKGLVRVADIKFPLPYRSKSFSLVIVSDALDYLSPRYLNKTVPELARV 180

Query: 181 SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA 240
           +SDG+V+ +G+PGQQKAK  EL+KFGRPAKMRSSSWWIRFF+QT+LEENE A+KKF+QAA
Sbjct: 181 ASDGVVLLAGNPGQQKAKGGELSKFGRPAKMRSSSWWIRFFSQTNLEENEAASKKFEQAA 240

Query: 241 SKQSYKPGCQVFHLNSYH 259
           SK SYKP CQVFHL   H
Sbjct: 241 SKSSYKPACQVFHLKPLH 258

[Close]
BLAST of Cp4.1LG10g02000 vs. ExPASy Swiss-Prot
Match: Q9M2Y6 (Probable pectin methylesterase CGR2 OS=Arabidopsis thaliana OX=3702 GN=CGR2 PE=2 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.3e-108
Identity = 193/261 (73.95%), Postives = 222/261 (85.06%), Query Frame = 0 

Query: 1   MQRRQPTSTRR---NGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGN 60
           M RRQ  STRR    GSFPFAGAL++KS+SSPLLSICLVLVGA LL+ YA+SGPG F   
Sbjct: 1   MARRQVGSTRRVGDGGSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKSI 60

Query: 61  KIVSKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIE 120
           K VSK+ GD+SCT E+ +A+P+LKKAYGD M KVLHVGPDTCSVVS LLKE ETEAWG+E
Sbjct: 61  KEVSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLLKEEETEAWGVE 120

Query: 121 PYEIEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEF 180
           PY+IED D +CKS V+KG+VRVADIKFPLPYRAKSFS VIVSDA+DYLSPKYLNKT+PE 
Sbjct: 121 PYDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPEL 180

Query: 181 ARVSSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFK 240
           ARV+SDG+V+F+G PGQQ+AKV EL+KFGRPAKMRS+SWW RFF QT+LEEN+  +KKF+
Sbjct: 181 ARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFE 240

Query: 241 QAASKQSYKPGCQVFHLNSYH 259
           QA SK  YKP CQVFHL   H
Sbjct: 241 QAVSKGLYKPACQVFHLKPLH 261

[Close]
BLAST of Cp4.1LG10g02000 vs. NCBI nr
Match: XP_023544913.1 (uncharacterized protein At3g49720-like [Cucurbita pepo subsp. pepo] >XP_023544914.1 uncharacterized protein At3g49720-like [Cucurbita pepo subsp. pepo] >XP_023544915.1 uncharacterized protein At3g49720-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 516 bits (1329), Expect = 1.43e-184
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0 

Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV 60
           MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV
Sbjct: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV 60

Query: 61  SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE 120
           SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE
Sbjct: 61  SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE 120

Query: 121 IEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV 180
           IEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV
Sbjct: 121 IEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV 180

Query: 181 SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA 240
           SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA
Sbjct: 181 SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA 240

Query: 241 SKQSYKPGCQVFHLNSYH 258
           SKQSYKPGCQVFHLNSYH
Sbjct: 241 SKQSYKPGCQVFHLNSYH 258

[Close]
BLAST of Cp4.1LG10g02000 vs. NCBI nr
Match: XP_022950800.1 (uncharacterized protein At3g49720-like [Cucurbita moschata] >XP_022950801.1 uncharacterized protein At3g49720-like [Cucurbita moschata])

HSP 1 Score: 513 bits (1321), Expect = 2.38e-183
Identity = 257/258 (99.61%), Postives = 257/258 (99.61%), Query Frame = 0 

Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV 60
           MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV
Sbjct: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV 60

Query: 61  SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE 120
           SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE
Sbjct: 61  SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE 120

Query: 121 IEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV 180
           IEDVD NCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV
Sbjct: 121 IEDVDENCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV 180

Query: 181 SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA 240
           SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA
Sbjct: 181 SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA 240

Query: 241 SKQSYKPGCQVFHLNSYH 258
           SKQSYKPGCQVFHLNSYH
Sbjct: 241 SKQSYKPGCQVFHLNSYH 258

[Close]
BLAST of Cp4.1LG10g02000 vs. NCBI nr
Match: XP_022978600.1 (uncharacterized protein At3g49720-like [Cucurbita maxima] >XP_022978601.1 uncharacterized protein At3g49720-like [Cucurbita maxima])

HSP 1 Score: 513 bits (1320), Expect = 3.38e-183
Identity = 257/258 (99.61%), Postives = 257/258 (99.61%), Query Frame = 0 

Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV 60
           MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV
Sbjct: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV 60

Query: 61  SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE 120
           SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE
Sbjct: 61  SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE 120

Query: 121 IEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV 180
           IEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV
Sbjct: 121 IEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV 180

Query: 181 SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA 240
           SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA
Sbjct: 181 SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA 240

Query: 241 SKQSYKPGCQVFHLNSYH 258
           SKQSYKP CQVFHLNSYH
Sbjct: 241 SKQSYKPVCQVFHLNSYH 258

[Close]
BLAST of Cp4.1LG10g02000 vs. NCBI nr
Match: KAG7034266.1 (hypothetical protein SDJN02_03993 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 513 bits (1321), Expect = 4.12e-183
Identity = 257/258 (99.61%), Postives = 257/258 (99.61%), Query Frame = 0 

Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV 60
           MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV
Sbjct: 16  MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV 75

Query: 61  SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE 120
           SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE
Sbjct: 76  SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE 135

Query: 121 IEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV 180
           IEDVD NCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV
Sbjct: 136 IEDVDENCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV 195

Query: 181 SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA 240
           SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA
Sbjct: 196 SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA 255

Query: 241 SKQSYKPGCQVFHLNSYH 258
           SKQSYKPGCQVFHLNSYH
Sbjct: 256 SKQSYKPGCQVFHLNSYH 273

[Close]
BLAST of Cp4.1LG10g02000 vs. NCBI nr
Match: XP_038881787.1 (probable pectin methylesterase CGR2 [Benincasa hispida])

HSP 1 Score: 492 bits (1266), Expect = 5.77e-175
Identity = 243/258 (94.19%), Postives = 252/258 (97.67%), Query Frame = 0 

Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV 60
           MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPG FGG+KIV
Sbjct: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGGSKIV 60

Query: 61  SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE 120
           SKIEGDFSCTLEL +A+PILKKAYGDSM KVLHVGPDTCSVVSKLLKEGETEAWGIEPY+
Sbjct: 61  SKIEGDFSCTLELQRAIPILKKAYGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120

Query: 121 IEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV 180
           IED DGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDA+DYLSPKYLNKTLPEFARV
Sbjct: 121 IEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180

Query: 181 SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA 240
           SSDGLVIF+GSPGQQKAKVNEL+KFGRPAKMRSSSWWIRFF QTSLEE+E AAKKFKQAA
Sbjct: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEAAAKKFKQAA 240

Query: 241 SKQSYKPGCQVFHLNSYH 258
           +KQSYKPGCQVFHLNSYH
Sbjct: 241 TKQSYKPGCQVFHLNSYH 258

[Close]
BLAST of Cp4.1LG10g02000 vs. ExPASy TrEMBL
Match: A0A6J1GFT8 (uncharacterized protein At3g49720-like OS=Cucurbita moschata OX=3662 GN=LOC111453797 PE=4 SV=1)

HSP 1 Score: 513 bits (1321), Expect = 1.15e-183
Identity = 257/258 (99.61%), Postives = 257/258 (99.61%), Query Frame = 0 

Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV 60
           MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV
Sbjct: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV 60

Query: 61  SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE 120
           SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE
Sbjct: 61  SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE 120

Query: 121 IEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV 180
           IEDVD NCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV
Sbjct: 121 IEDVDENCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV 180

Query: 181 SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA 240
           SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA
Sbjct: 181 SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA 240

Query: 241 SKQSYKPGCQVFHLNSYH 258
           SKQSYKPGCQVFHLNSYH
Sbjct: 241 SKQSYKPGCQVFHLNSYH 258

[Close]
BLAST of Cp4.1LG10g02000 vs. ExPASy TrEMBL
Match: A0A6J1IN66 (uncharacterized protein At3g49720-like OS=Cucurbita maxima OX=3661 GN=LOC111478536 PE=4 SV=1)

HSP 1 Score: 513 bits (1320), Expect = 1.64e-183
Identity = 257/258 (99.61%), Postives = 257/258 (99.61%), Query Frame = 0 

Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV 60
           MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV
Sbjct: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV 60

Query: 61  SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE 120
           SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE
Sbjct: 61  SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE 120

Query: 121 IEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV 180
           IEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV
Sbjct: 121 IEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV 180

Query: 181 SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA 240
           SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA
Sbjct: 181 SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA 240

Query: 241 SKQSYKPGCQVFHLNSYH 258
           SKQSYKP CQVFHLNSYH
Sbjct: 241 SKQSYKPVCQVFHLNSYH 258

[Close]
BLAST of Cp4.1LG10g02000 vs. ExPASy TrEMBL
Match: A0A1S3CN00 (uncharacterized protein At3g49720-like OS=Cucumis melo OX=3656 GN=LOC103502767 PE=4 SV=1)

HSP 1 Score: 492 bits (1266), Expect = 2.79e-175
Identity = 242/258 (93.80%), Postives = 252/258 (97.67%), Query Frame = 0 

Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV 60
           MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGA+LLLVYAFSGPG FGG KIV
Sbjct: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAILLLVYAFSGPGLFGGTKIV 60

Query: 61  SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE 120
           SKIEGDFSCTLEL +A+PILKKA+GDSM KVLHVGPDTCSVVSKLLKEGETEAWGIEPY+
Sbjct: 61  SKIEGDFSCTLELQRAIPILKKAFGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120

Query: 121 IEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV 180
           IED DGNCKSLVNKGIVRVADIKFPLPYR+KSFSHVIVSDA+DYLSPKYLNKTLPEFARV
Sbjct: 121 IEDADGNCKSLVNKGIVRVADIKFPLPYRSKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180

Query: 181 SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA 240
           SSDGLVIF+GSPGQQKAKVNEL+KFGRPAKMRSSSWWIRFF QTSLEE+EGAAKKFKQAA
Sbjct: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEEDEGAAKKFKQAA 240

Query: 241 SKQSYKPGCQVFHLNSYH 258
           SKQSYKPGCQVFHLNSYH
Sbjct: 241 SKQSYKPGCQVFHLNSYH 258

[Close]
BLAST of Cp4.1LG10g02000 vs. ExPASy TrEMBL
Match: A0A1S3B1Q9 (uncharacterized protein At3g49720 OS=Cucumis melo OX=3656 GN=LOC103484880 PE=4 SV=1)

HSP 1 Score: 486 bits (1252), Expect = 3.80e-173
Identity = 242/258 (93.80%), Postives = 250/258 (96.90%), Query Frame = 0 

Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV 60
           MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPG FGG KIV
Sbjct: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGLFGGTKIV 60

Query: 61  SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE 120
           SKIEGDFSCTLEL +AV ILKKA+G+SM KVLHVGPDTCSVVSKLLKEGETEAWGIEPY+
Sbjct: 61  SKIEGDFSCTLELQRAVTILKKAFGNSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120

Query: 121 IEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV 180
           IED DGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDA+DYLSPKYLNKTLPEFARV
Sbjct: 121 IEDADGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180

Query: 181 SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA 240
           SSDGLVIF+GSPGQQKAKVNEL+KFGRPAKMRSSSWWIRFF QTSLEENE AAKKFKQAA
Sbjct: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKMRSSSWWIRFFVQTSLEENEAAAKKFKQAA 240

Query: 241 SKQSYKPGCQVFHLNSYH 258
           SKQSYKPGCQVFHL+SYH
Sbjct: 241 SKQSYKPGCQVFHLSSYH 258

[Close]
BLAST of Cp4.1LG10g02000 vs. ExPASy TrEMBL
Match: A0A0A0KX27 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630200 PE=4 SV=1)

HSP 1 Score: 484 bits (1247), Expect = 2.20e-172
Identity = 237/258 (91.86%), Postives = 251/258 (97.29%), Query Frame = 0 

Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV 60
           MQRRQPTSTRRNGSFPFAGALNAKSK+SPLLSICLVLVGA+LLLVYAFSGPG FGG KIV
Sbjct: 1   MQRRQPTSTRRNGSFPFAGALNAKSKASPLLSICLVLVGAILLLVYAFSGPGLFGGTKIV 60

Query: 61  SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE 120
           SKIEGDFSCTLEL +A+PILKKA+GDSM KVLHVGPDTCSVVSKLLKEGETEAWGIEPY+
Sbjct: 61  SKIEGDFSCTLELQRAIPILKKAFGDSMRKVLHVGPDTCSVVSKLLKEGETEAWGIEPYD 120

Query: 121 IEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV 180
           IED DG CKSLVNKGIVRVADIKFPLPYR+KSFSHVIVSDA+DYLSPKYLNKTLPEFARV
Sbjct: 121 IEDADGKCKSLVNKGIVRVADIKFPLPYRSKSFSHVIVSDALDYLSPKYLNKTLPEFARV 180

Query: 181 SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA 240
           SSDGLVIF+GSPGQQKAKVNEL+KFGRPAK+RSSSWWIRFF QTSLEE+EG+AKKF+QAA
Sbjct: 181 SSDGLVIFTGSPGQQKAKVNELSKFGRPAKLRSSSWWIRFFVQTSLEEDEGSAKKFEQAA 240

Query: 241 SKQSYKPGCQVFHLNSYH 258
           SKQSYKPGCQVFHLNSYH
Sbjct: 241 SKQSYKPGCQVFHLNSYH 258

[Close]
BLAST of Cp4.1LG10g02000 vs. TAIR 10
Match: AT5G65810.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49720.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 395.2 bits (1014), Expect = 4.0e-110
Identity = 189/258 (73.26%), Postives = 222/258 (86.05%), Query Frame = 0 

Query: 1   MQRRQPTSTRRNGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGNKIV 60
           M RRQ      +GSFPF GAL++KS+SSPLLS+CLVLVGA LL+ YA+SGPG F   + V
Sbjct: 1   MSRRQVRRVGDSGSFPFVGALHSKSRSSPLLSVCLVLVGACLLIGYAYSGPGMFKSIREV 60

Query: 61  SKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIEPYE 120
           SKI GD+SCT E+ +A+PILK AYGDSM KVLHVGP+TCSVVS LL E ETEAWG+EPY+
Sbjct: 61  SKITGDYSCTAEVQRAIPILKSAYGDSMRKVLHVGPETCSVVSSLLNEEETEAWGVEPYD 120

Query: 121 IEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEFARV 180
           +ED D NCKSL++KG+VRVADIKFPLPYR+KSFS VIVSDA+DYLSP+YLNKT+PE ARV
Sbjct: 121 VEDADSNCKSLLHKGLVRVADIKFPLPYRSKSFSLVIVSDALDYLSPRYLNKTVPELARV 180

Query: 181 SSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFKQAA 240
           +SDG+V+ +G+PGQQKAK  EL+KFGRPAKMRSSSWWIRFF+QT+LEENE A+KKF+QAA
Sbjct: 181 ASDGVVLLAGNPGQQKAKGGELSKFGRPAKMRSSSWWIRFFSQTNLEENEAASKKFEQAA 240

Query: 241 SKQSYKPGCQVFHLNSYH 259
           SK SYKP CQVFHL   H
Sbjct: 241 SKSSYKPACQVFHLKPLH 258

[Close]
BLAST of Cp4.1LG10g02000 vs. TAIR 10
Match: AT3G49720.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 394.0 bits (1011), Expect = 9.0e-110
Identity = 193/261 (73.95%), Postives = 222/261 (85.06%), Query Frame = 0 

Query: 1   MQRRQPTSTRR---NGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGN 60
           M RRQ  STRR    GSFPFAGAL++KS+SSPLLSICLVLVGA LL+ YA+SGPG F   
Sbjct: 1   MARRQVGSTRRVGDGGSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKSI 60

Query: 61  KIVSKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIE 120
           K VSK+ GD+SCT E+ +A+P+LKKAYGD M KVLHVGPDTCSVVS LLKE ETEAWG+E
Sbjct: 61  KEVSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLLKEEETEAWGVE 120

Query: 121 PYEIEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEF 180
           PY+IED D +CKS V+KG+VRVADIKFPLPYRAKSFS VIVSDA+DYLSPKYLNKT+PE 
Sbjct: 121 PYDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPEL 180

Query: 181 ARVSSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFK 240
           ARV+SDG+V+F+G PGQQ+AKV EL+KFGRPAKMRS+SWW RFF QT+LEEN+  +KKF+
Sbjct: 181 ARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFE 240

Query: 241 QAASKQSYKPGCQVFHLNSYH 259
           QA SK  YKP CQVFHL   H
Sbjct: 241 QAVSKGLYKPACQVFHLKPLH 261

[Close]
BLAST of Cp4.1LG10g02000 vs. TAIR 10
Match: AT3G49720.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 394.0 bits (1011), Expect = 9.0e-110
Identity = 193/261 (73.95%), Postives = 222/261 (85.06%), Query Frame = 0 

Query: 1   MQRRQPTSTRR---NGSFPFAGALNAKSKSSPLLSICLVLVGAVLLLVYAFSGPGSFGGN 60
           M RRQ  STRR    GSFPFAGAL++KS+SSPLLSICLVLVGA LL+ YA+SGPG F   
Sbjct: 1   MARRQVGSTRRVGDGGSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKSI 60

Query: 61  KIVSKIEGDFSCTLELLKAVPILKKAYGDSMNKVLHVGPDTCSVVSKLLKEGETEAWGIE 120
           K VSK+ GD+SCT E+ +A+P+LKKAYGD M KVLHVGPDTCSVVS LLKE ETEAWG+E
Sbjct: 61  KEVSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLLKEEETEAWGVE 120

Query: 121 PYEIEDVDGNCKSLVNKGIVRVADIKFPLPYRAKSFSHVIVSDAMDYLSPKYLNKTLPEF 180
           PY+IED D +CKS V+KG+VRVADIKFPLPYRAKSFS VIVSDA+DYLSPKYLNKT+PE 
Sbjct: 121 PYDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPEL 180

Query: 181 ARVSSDGLVIFSGSPGQQKAKVNELTKFGRPAKMRSSSWWIRFFTQTSLEENEGAAKKFK 240
           ARV+SDG+V+F+G PGQQ+AKV EL+KFGRPAKMRS+SWW RFF QT+LEEN+  +KKF+
Sbjct: 181 ARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFE 240

Query: 241 QAASKQSYKPGCQVFHLNSYH 259
           QA SK  YKP CQVFHL   H
Sbjct: 241 QAVSKGLYKPACQVFHLKPLH 261

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g02000 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q0WPN75.7e-10973.26Probable pectin methylesterase CGR3 OS=Arabidopsis thaliana OX=3702 GN=CGR3 PE=2... [more]
Q9M2Y61.3e-10873.95Probable pectin methylesterase CGR2 OS=Arabidopsis thaliana OX=3702 GN=CGR2 PE=2... [more]
BLAST of Cp4.1LG10g02000 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023544913.11.43e-184100.00uncharacterized protein At3g49720-like [Cucurbita pepo subsp. pepo] >XP_02354491... [more]
XP_022950800.12.38e-18399.61uncharacterized protein At3g49720-like [Cucurbita moschata] >XP_022950801.1 unch... [more]
XP_022978600.13.38e-18399.61uncharacterized protein At3g49720-like [Cucurbita maxima] >XP_022978601.1 unchar... [more]
KAG7034266.14.12e-18399.61hypothetical protein SDJN02_03993 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_038881787.15.77e-17594.19probable pectin methylesterase CGR2 [Benincasa hispida][more]
BLAST of Cp4.1LG10g02000 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GFT81.15e-18399.61uncharacterized protein At3g49720-like OS=Cucurbita moschata OX=3662 GN=LOC11145... [more]
A0A6J1IN661.64e-18399.61uncharacterized protein At3g49720-like OS=Cucurbita maxima OX=3661 GN=LOC1114785... [more]
A0A1S3CN002.79e-17593.80uncharacterized protein At3g49720-like OS=Cucumis melo OX=3656 GN=LOC103502767 P... [more]
A0A1S3B1Q93.80e-17393.80uncharacterized protein At3g49720 OS=Cucumis melo OX=3656 GN=LOC103484880 PE=4 S... [more]
A0A0A0KX272.20e-17291.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630200 PE=4 SV=1[more]
BLAST of Cp4.1LG10g02000 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G65810.14.0e-11073.26unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G49720.19.0e-11073.95unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G49720.29.0e-11073.95unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 70..248
e-value: 1.8E-7
score: 32.7
NoneNo IPR availablePANTHERPTHR34208:SF10PECTIN METHYLESTERASE CGR3-RELATEDcoord: 1..258
IPR044689Pectin methyltransferase CGR2/3PANTHERPTHR34208S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATEDcoord: 1..258
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 89..225

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g02000.1Cp4.1LG10g02000.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045488 pectin metabolic process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008168 methyltransferase activity