Cp4.1LG08g03470 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g03470
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	HR-like lesion-inducing protein-related
Location	Cp4.1LG08: 2037624 .. 2040490 (-)
RNA-Seq Expression	Cp4.1LG08g03470
Synteny	Cp4.1LG08g03470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTACAACACCCAGTTGTATATTCCAGAATTCACACTAGAAATTTCAAGTGGGTCTAGCAAGGCGGCCATTTAAGGCACAGCGAGCACGAAATTTGATCGAATAGTCGGAGGCGAAGGAGTTGCCGATCCATAACAGGAGTCTGTTCTTGAACCTCGGATCTGCAACAAGAAACATGGGGTTCTTCTCCTTCCTTGGACGGGTCCTCTTTGCCTCCATCTTCATCCTCTCCGCTTGGCAAATGTATGATTTCTTCTATTTCTGTTTAGTTTTTCCATATTCCCACTCGATTGACTGGATCTCGAATCTGTAGATTTCGATCTATATGTTTCTTCCGTTTCTAATATTTCATTGCTCTTGCTTCAATTTCCGAATTAGGTATTGGGGTTTTTGTTAGTGCCTATGAATGCTTAGGATTGTGTTGCTGTTATGGAATTCTGGTTCTTATTCATATAAATTGCGGGCGAGTACTTCTAATGGCTAGATTTATTAGGGCGCCATTCAATTGACCTCGGATTCGTAGTTTGGGACGGGTTGGTTAAGAATGATTTATATACGGTTCATTTCTTATTGTCATGGATATTAAGGACCATTTTGGGGGCTAAAAGCGTTTTCATGAGGAGCCATTTTTGCTAGTGATTTTATTCAATTTCGGGCGATGGTTTTGATATGAAGAAGGTTATATTTGTAGGGTAAATTATTTCTGTAGGGGATAAGGTATTGGTTTCATCCATCCAAACTTGAATGAACTATGTTAAGTGAAAGATTAGAGGATATATTGCATTGAAGATCTTCAATTCTCCAATTCGATATTTTAGGTATTTCTAGCTATGTCTTCTTCTACTAGTCATAATTTGAGGATCAATTTTTTTCGTTGGCTAATTATGTAGTCACTTTTTTCAATCTTATAGTAATGAACGGGAGTGTGGAAGAAATGAACTGTTACTGTTGGATCCTATCAACAGGGGACTTAAGACCTTGGGGGATTAGCTTAGTAGTCAATAAGAGCCGATATAAATAATAAAGAACTCAGGAATGCGTTCAACCCAGGTGCTCGCCGCATTAAAATGTAGTAGAGCCAGACGGTTGTTTGGGATTATAGGGGAATGCAACTTTTTCCATGCACATTAGAAGTTCTTTTCCTTGAATCTTTAGACCAGTAGGATGTTGGTTTGCCTCTTATATCTACCTTTTCATAATTTTTTTGGTTATAATTTTAACAAGATGGGCAAGGGAGCGACGCACCCTGCTTACTCCCTTACTAGCTAAACAAAATCTCTCCACGGGACAAGGATGACGCAGATAACTTTCTAGAGAAAGCATTCAGTAGTTACAGTTTTATCACTTGAGAGCTATGTTATTCTCTGCGTTTATTAAGTACACGTATAAATATCTCGAGCAAAGTGCTTCGTCTAGCGAGAACTCTCTTATTTTGGTATTGACGTTGTATACATCCATTGGTTAGGTTTAATGAGTTTAGTAACAATGGTGGGTCAGCGGCTGCGGAATTGTCTCCAAAGGTAGCTGTTTTGAGGAGAAATTTATCATCCAAGCTGGGGGTAGCGATACCTGATATTGATGTAAGGCCATTTATTTGTAACCATCTGTTTGCCTAAAGTTTTTGTCTGTCGTTCTCTTCTTATTCACCACTTCATAAAAGAGCGTACACCTTCGCGCGCTTATGTAACTTATGTTGTCAATATGAGTATGCGATGACTTTTCTTTTTCAAACTCTGATCATTTCTGCAGGTTACACACTTGGTTGCCATTTCTTTATCTCTTAAAGGAATTGGAGGCCTTCTGTTTGTTTTTGGAAGCAGCGTTGGAGCTTATCTCCTGGTAAGGATTCACCATGTTCGTAATTTTAGCCTCGAATATAAATTTGGTTAGTAAGATCCCACATTGGTTGAGTGCTAGTGAGAACGCTGGGCCCCGAAGAGGGTGGATTGTGAGATCTCACATCGATTGGGGAGGAGAATGGAACACCCTTTATAAGGGTGTGGAAAATTCTCCCTAGATGATGCGTTTTAAAAAACCTTGAGGGAAAATCCGAAAGGAAAAGCCAAAAAAGGACAATATCTGCTAGTTGTGTGCTTGGCCTGTTACGGTGTTACTAAAAATTTATGGACGTCTTTAAAGAAAATATTGCCTTCTCTTTCAGCTTCTGCAATTGGCTATAATCACTCCGGTTCTTTATGATTTCTTCAACATTAGCCCCCAGAAGCCTTTTTTCGGTATCCTGCTTGGCGATTTCTTGCAGGTTTGTCCATATGTTTTCTGAATTTCGCCCCCATGATTTCATTTTAATCATCTCAGTTTACCTGTGAAATAAAAAGAAAAAAACTTATGGAATCCTATTTTTCTTGGCAGCACATTGCACTTTTTGGTGCTCTGCTGTTCTTCTTGGGGATGAAGAACACAGTTCCAAAGAGGCAACCGAAAAAGAAGGCGCCGAAAACAAAAACGTATTAGATTTGTGAACGAAGCAACAGGTTGGCGATCGGATTAATTTGGTCTGGCACTCAGTTCTTAGGTTTTTACACATTTTCACCATTTGATGCAAACAAGTTATTTACTTCTCTTGTAGTTGGCTGTTCTCTTTTTCTCGCATTTACTTTGCTTCATTATTGCTTCTGATGAGTTATTATTTAAGTTGAGCTGCGGCATAATAGGTCTTTGTACTTGTGCTCTGGATAAAAGAATTACACTAATTTTTTTTAACTAAGGAGTTAGCTTGATGTGCTTATTTAGCTCAGATTTCTTAGTATTTGAACCAACCAGTTGAACAAGCCTCTTCTACATGCTTCTTATCTACCATCTACCGTTATAGTATAGGATGAGGAACTAGTTGAACTATGCTCGAATTGAC

mRNA sequence

TTACAACACCCAGTTGTATATTCCAGAATTCACACTAGAAATTTCAAGTGGGTCTAGCAAGGCGGCCATTTAAGGCACAGCGAGCACGAAATTTGATCGAATAGTCGGAGGCGAAGGAGTTGCCGATCCATAACAGGAGTCTGTTCTTGAACCTCGGATCTGCAACAAGAAACATGGGGTTCTTCTCCTTCCTTGGACGGGTCCTCTTTGCCTCCATCTTCATCCTCTCCGCTTGGCAAATGTTTAATGAGTTTAGTAACAATGGTGGGTCAGCGGCTGCGGAATTGTCTCCAAAGGTAGCTGTTTTGAGGAGAAATTTATCATCCAAGCTGGGGGTAGCGATACCTGATATTGATGTTACACACTTGGTTGCCATTTCTTTATCTCTTAAAGGAATTGGAGGCCTTCTGTTTGTTTTTGGAAGCAGCGTTGGAGCTTATCTCCTGCACATTGCACTTTTTGGTGCTCTGCTGTTCTTCTTGGGGATGAAGAACACAGTTCCAAAGAGGCAACCGAAAAAGAAGGCGCCGAAAACAAAAACGTATTAGATTTGTGAACGAAGCAACAGGTTGGCGATCGGATTAATTTGGTCTGGCACTCAGTTCTTAGGTTTTTACACATTTTCACCATTTGATGCAAACAAGTTATTTACTTCTCTTGTAGTTGGCTGTTCTCTTTTTCTCGCATTTACTTTGCTTCATTATTGCTTCTGATGAGTTATTATTTAAGTTGAGCTGCGGCATAATAGGTCTTTGTACTTGTGCTCTGGATAAAAGAATTACACTAATTTTTTTTAACTAAGGAGTTAGCTTGATGTGCTTATTTAGCTCAGATTTCTTAGTATTTGAACCAACCAGTTGAACAAGCCTCTTCTACATGCTTCTTATCTACCATCTACCGTTATAGTATAGGATGAGGAACTAGTTGAACTATGCTCGAATTGAC

Coding sequence (CDS)

ATGGGGTTCTTCTCCTTCCTTGGACGGGTCCTCTTTGCCTCCATCTTCATCCTCTCCGCTTGGCAAATGTTTAATGAGTTTAGTAACAATGGTGGGTCAGCGGCTGCGGAATTGTCTCCAAAGGTAGCTGTTTTGAGGAGAAATTTATCATCCAAGCTGGGGGTAGCGATACCTGATATTGATGTTACACACTTGGTTGCCATTTCTTTATCTCTTAAAGGAATTGGAGGCCTTCTGTTTGTTTTTGGAAGCAGCGTTGGAGCTTATCTCCTGCACATTGCACTTTTTGGTGCTCTGCTGTTCTTCTTGGGGATGAAGAACACAGTTCCAAAGAGGCAACCGAAAAAGAAGGCGCCGAAAACAAAAACGTATTAG

Protein sequence

MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDIDVTHLVAISLSLKGIGGLLFVFGSSVGAYLLHIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY

Homology

[Close]

BLAST of Cp4.1LG08g03470 vs. NCBI nr
Match: KAG6597378.1 (hypothetical protein SDJN03_10558, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 217 bits (553), Expect = 3.39e-70
Identity = 124/157 (78.98%), Postives = 124/157 (78.98%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI
Sbjct: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60

Query: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLL----------------------------- 120
           DVTHLVAISLSLKGIGGLLFVFGSSVGAYLL                             
Sbjct: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNFSPQNPFFGILLS 120

Query: 121 ----HIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 124
               HIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY
Sbjct: 121 DFLQHIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 157

[Close]

BLAST of Cp4.1LG08g03470 vs. NCBI nr
Match: XP_023538935.1 (uncharacterized protein LOC111799718 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 217 bits (553), Expect = 3.39e-70
Identity = 124/157 (78.98%), Postives = 124/157 (78.98%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI
Sbjct: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60

Query: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLL----------------------------- 120
           DVTHLVAISLSLKGIGGLLFVFGSSVGAYLL                             
Sbjct: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNISPQKPFFGILLG 120

Query: 121 ----HIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 124
               HIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY
Sbjct: 121 DFLQHIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 157

[Close]

BLAST of Cp4.1LG08g03470 vs. NCBI nr
Match: XP_022975056.1 (uncharacterized protein LOC111474025 [Cucurbita maxima])

HSP 1 Score: 214 bits (546), Expect = 3.96e-69
Identity = 123/157 (78.34%), Postives = 123/157 (78.34%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAA LSPKVAVLRRNLSSKLGVAIPDI
Sbjct: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAVLSPKVAVLRRNLSSKLGVAIPDI 60

Query: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLL----------------------------- 120
           DVTHLVAISLSLKGIGGLLFVFGSSVGAYLL                             
Sbjct: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNFSLQKPFFGILLG 120

Query: 121 ----HIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 124
               HIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY
Sbjct: 121 DFLQHIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 157

[Close]

BLAST of Cp4.1LG08g03470 vs. NCBI nr
Match: XP_022942464.1 (uncharacterized protein LOC111447492 [Cucurbita moschata])

HSP 1 Score: 214 bits (545), Expect = 5.62e-69
Identity = 123/157 (78.34%), Postives = 123/157 (78.34%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI
Sbjct: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60

Query: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLL----------------------------- 120
           DVTHLVAISLSLKGIGGLLFVFGSSVGAYLL                             
Sbjct: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNFSPQNPFFGILLS 120

Query: 121 ----HIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 124
               HIALFGALLFFL MKNTVPKRQPKKKAPKTKTY
Sbjct: 121 DFLQHIALFGALLFFLEMKNTVPKRQPKKKAPKTKTY 157

[Close]

BLAST of Cp4.1LG08g03470 vs. NCBI nr
Match: XP_022924237.1 (uncharacterized protein LOC111431764 [Cucurbita moschata])

HSP 1 Score: 181 bits (459), Expect = 7.24e-56
Identity = 107/158 (67.72%), Postives = 112/158 (70.89%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           M FFSFLGRVLFASIFILSAWQMFNEF +NGG AAAELS KVAVLRRNLSSKLGVAIP+I
Sbjct: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI 60

Query: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLL----------------------------- 120
           DV HLVAISLSLKGIGGLLFVFGS VGAYLL                             
Sbjct: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLF 120

Query: 121 -----HIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 124
                HIALFGAL+FFLGMK T P++  KKK  KTKTY
Sbjct: 121 SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY 158

[Close]

BLAST of Cp4.1LG08g03470 vs. ExPASy TrEMBL
Match: A0A6J1ID53 (uncharacterized protein LOC111474025 OS=Cucurbita maxima OX=3661 GN=LOC111474025 PE=4 SV=1)

HSP 1 Score: 214 bits (546), Expect = 1.92e-69
Identity = 123/157 (78.34%), Postives = 123/157 (78.34%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAA LSPKVAVLRRNLSSKLGVAIPDI
Sbjct: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAVLSPKVAVLRRNLSSKLGVAIPDI 60

Query: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLL----------------------------- 120
           DVTHLVAISLSLKGIGGLLFVFGSSVGAYLL                             
Sbjct: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNFSLQKPFFGILLG 120

Query: 121 ----HIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 124
               HIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY
Sbjct: 121 DFLQHIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 157

[Close]

BLAST of Cp4.1LG08g03470 vs. ExPASy TrEMBL
Match: A0A6J1FRE6 (uncharacterized protein LOC111447492 OS=Cucurbita moschata OX=3662 GN=LOC111447492 PE=4 SV=1)

HSP 1 Score: 214 bits (545), Expect = 2.72e-69
Identity = 123/157 (78.34%), Postives = 123/157 (78.34%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI
Sbjct: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60

Query: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLL----------------------------- 120
           DVTHLVAISLSLKGIGGLLFVFGSSVGAYLL                             
Sbjct: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLLLLQLAIITPVLYDFFNFSPQNPFFGILLS 120

Query: 121 ----HIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 124
               HIALFGALLFFL MKNTVPKRQPKKKAPKTKTY
Sbjct: 121 DFLQHIALFGALLFFLEMKNTVPKRQPKKKAPKTKTY 157

[Close]

BLAST of Cp4.1LG08g03470 vs. ExPASy TrEMBL
Match: A0A6J1E8C2 (uncharacterized protein LOC111431764 OS=Cucurbita moschata OX=3662 GN=LOC111431764 PE=4 SV=1)

HSP 1 Score: 181 bits (459), Expect = 3.51e-56
Identity = 107/158 (67.72%), Postives = 112/158 (70.89%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           M FFSFLGRVLFASIFILSAWQMFNEF +NGG AAAELS KVAVLRRNLSSKLGVAIP+I
Sbjct: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEI 60

Query: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLL----------------------------- 120
           DV HLVAISLSLKGIGGLLFVFGS VGAYLL                             
Sbjct: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLF 120

Query: 121 -----HIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 124
                HIALFGAL+FFLGMK T P++  KKK  KTKTY
Sbjct: 121 SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY 158

[Close]

BLAST of Cp4.1LG08g03470 vs. ExPASy TrEMBL
Match: A0A6J1ISL2 (uncharacterized protein LOC111479010 OS=Cucurbita maxima OX=3661 GN=LOC111479010 PE=4 SV=1)

HSP 1 Score: 180 bits (457), Expect = 7.07e-56
Identity = 106/158 (67.09%), Postives = 112/158 (70.89%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           M FFSFLGRVLFASIFILSAWQMFNEF +NGG A+AEL+ KVAVLRRNLSSKLGVAIPDI
Sbjct: 1   MRFFSFLGRVLFASIFILSAWQMFNEFGHNGGPASAELALKVAVLRRNLSSKLGVAIPDI 60

Query: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLL----------------------------- 120
           DV HLVAISLSLKGIGGLLFVFGS VGAYLL                             
Sbjct: 61  DVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLF 120

Query: 121 -----HIALFGALLFFLGMKNTVPKRQPKKKAPKTKTY 124
                HIALFGAL+FFLGMK T P++  KKK  KTKTY
Sbjct: 121 SDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY 158

[Close]

BLAST of Cp4.1LG08g03470 vs. ExPASy TrEMBL
Match: A0A5A7U0G2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G005120 PE=4 SV=1)

HSP 1 Score: 173 bits (439), Expect = 3.87e-53
Identity = 104/158 (65.82%), Postives = 109/158 (68.99%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           MGFFSF GR+LFAS FILSAWQMFNEF NNGG AAAELS KVAVLRRNLSSKL VAIPDI
Sbjct: 1   MGFFSFFGRLLFASFFILSAWQMFNEFGNNGGPAAAELSSKVAVLRRNLSSKLAVAIPDI 60

Query: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLL----------------------------- 120
           DV HLVA+SLSLKGIGGLLFVFGS VGAYLL                             
Sbjct: 61  DVRHLVALSLSLKGIGGLLFVFGSRVGAYLLLLHLVIITPVLFDFFNFSLQKPNFGIPLS 120

Query: 121 ----HIALFGALLFFLGMKNTV-PKRQPKKKAPKTKTY 124
               HIALFGALLFFLGMK+T  PK+  KKK  K K +
Sbjct: 121 DFLQHIALFGALLFFLGMKSTTSPKKPLKKKTQKAKAH 158

[Close]

BLAST of Cp4.1LG08g03470 vs. TAIR 10
Match: AT5G43460.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 129.8 bits (325), Expect = 1.5e-30
Identity = 78/156 (50.00%), Postives = 100/156 (64.10%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           MGFFSFLGRVLFAS+FILSAWQMFN+    GG AA EL+PK+ +++ +LSS+LGV +P I
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFND----GGPAAKELAPKLDLVKAHLSSRLGVTLPKI 60

Query: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLL----------------------------- 120
           +V  +VA  ++LKG+GGLLFV G++ GAYLL                             
Sbjct: 61  EVRQVVATIIALKGVGGLLFVIGNTFGAYLLASYLVVFGPILYDFYNYGPQERHFSLLLT 120

Query: 121 ----HIALFGALLFFLGMKNTVP-KRQPKKKAPKTK 123
                +ALFGALLFF+GMKN+ P K+  KK+ PK K
Sbjct: 121 EFLQSVALFGALLFFIGMKNSTPAKKNLKKRTPKPK 152

[Close]

BLAST of Cp4.1LG08g03470 vs. TAIR 10
Match: AT1G04340.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 126.3 bits (316), Expect = 1.7e-29
Identity = 77/157 (49.04%), Postives = 98/157 (62.42%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           MGFFSFLGRVLFAS+FILSAWQMFN+F  +GG AA EL+PK+ + + +LSS LGV++P++
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNDFGTDGGPAAKELAPKLDLTKAHLSSILGVSLPNL 60

Query: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLL----------------------------- 120
           +V  +V   ++LKG+GGLLFV G+  GAYLL                             
Sbjct: 61  EVKQVVWAIVALKGLGGLLFVIGNIFGAYLLAVYLVVVSPILYDFYNYGPEDRQFSLLLT 120

Query: 121 ----HIALFGALLFFLGMKN--TVPKRQPKKKAPKTK 123
                +AL GALLFF+GMKN  T  KR  KK+ PK K
Sbjct: 121 EFLQSVALLGALLFFIGMKNSTTSSKRILKKRTPKPK 157

[Close]

BLAST of Cp4.1LG08g03470 vs. TAIR 10
Match: AT4G14420.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 109.0 bits (271), Expect = 2.8e-24
Identity = 68/156 (43.59%), Postives = 88/156 (56.41%), Query Frame = 0


Query: 1   MGFFSFLGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDI 60
           M   SFLGR LF S+F+LSAWQ FN+F  +GG +A  L PK      ++++  G  +P +
Sbjct: 1   MELASFLGRALFVSVFLLSAWQEFNDFGEDGGRSAKSLKPKFNAFVNHVTTHTGQQLPPV 60

Query: 61  DVTHLVAISLSLKGIGGLLFVFGSSVGAYLL----------------------------- 120
           D+  LVA +++LKGIGGLLFVFGSS+GAYLL                             
Sbjct: 61  DMKILVAAAIALKGIGGLLFVFGSSLGAYLLLLHQAVATPILYDFYNYDVDRKEFGQLFS 120

Query: 121 ----HIALFGALLFFLGMKNTVPK-RQPKKKAPKTK 123
                +AL G LLFF+GMKN+    RQ +KKAPK K
Sbjct: 121 KFTQSLALLGGLLFFIGMKNSRKHGRQLRKKAPKAK 156

[Close]

BLAST of Cp4.1LG08g03470 vs. TAIR 10
Match: AT3G23190.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 48.1 bits (113), Expect = 5.8e-06
Identity = 33/96 (34.38%), Postives = 52/96 (54.17%), Query Frame = 0


Query: 8   GRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDIDVTHLVA 67
           GRV+FAS F++SAW+ +  F    G AA EL PK+        +             +VA
Sbjct: 25  GRVVFASAFLVSAWREYYGF----GLAADELRPKLGFFENQAKA-------------IVA 84

Query: 68  ISLSLKGIGGLLFVFGSSVGAYLLHI--ALFGALLF 102
           + + +K +GG+LF+F + VGA LL +  A+   +L+
Sbjct: 85  LGILMKFVGGILFIFNTYVGAALLLVYQAILSPILY 103

[Close]

BLAST of Cp4.1LG08g03470 vs. TAIR 10
Match: AT3G23180.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 47.4 bits (111), Expect = 9.9e-06
Identity = 28/85 (32.94%), Postives = 42/85 (49.41%), Query Frame = 0


Query: 7  LGRVLFASIFILSAWQMFNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDIDVTHLV 66
          +GR LFAS F LS+W  + E   N        SPK                    + HL+
Sbjct: 24 IGRALFASSFFLSSWHDYMELKANWNGTEDYWSPK-------------FGYSGDQIKHLM 83

Query: 67 AISLSLKGIGGLLFVFGSSVGAYLL 92
           +S+ ++ +GGL+F++GS  GA+LL
Sbjct: 84 TVSIIVRTLGGLIFIYGSFFGAFLL 95

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g03470 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG08g03470 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597378.1	3.39e-70	78.98	hypothetical protein SDJN03_10558, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023538935.1	3.39e-70	78.98	uncharacterized protein LOC111799718 [Cucurbita pepo subsp. pepo]	[more]
XP_022975056.1	3.96e-69	78.34	uncharacterized protein LOC111474025 [Cucurbita maxima]	[more]
XP_022942464.1	5.62e-69	78.34	uncharacterized protein LOC111447492 [Cucurbita moschata]	[more]
XP_022924237.1	7.24e-56	67.72	uncharacterized protein LOC111431764 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG08g03470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ID53	1.92e-69	78.34	uncharacterized protein LOC111474025 OS=Cucurbita maxima OX=3661 GN=LOC111474025...	[more]
A0A6J1FRE6	2.72e-69	78.34	uncharacterized protein LOC111447492 OS=Cucurbita moschata OX=3662 GN=LOC1114474...	[more]
A0A6J1E8C2	3.51e-56	67.72	uncharacterized protein LOC111431764 OS=Cucurbita moschata OX=3662 GN=LOC1114317...	[more]
A0A6J1ISL2	7.07e-56	67.09	uncharacterized protein LOC111479010 OS=Cucurbita maxima OX=3661 GN=LOC111479010...	[more]
A0A5A7U0G2	3.87e-53	65.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Cp4.1LG08g03470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43460.1	1.5e-30	50.00	HR-like lesion-inducing protein-related	[more]
AT1G04340.1	1.7e-29	49.04	HR-like lesion-inducing protein-related	[more]
AT4G14420.1	2.8e-24	43.59	HR-like lesion-inducing protein-related	[more]
AT3G23190.1	5.8e-06	34.38	HR-like lesion-inducing protein-related	[more]
AT3G23180.1	9.9e-06	32.94	HR-like lesion-inducing protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008637	HR-like lesion-inducer	PFAM	PF05514	HR_lesion	coord: 1..93 e-value: 2.2E-33 score: 115.4
None	No IPR available	PANTHER	PTHR31474	FAMILY NOT NAMED	coord: 91..123 coord: 1..95
None	No IPR available	PANTHER	PTHR31474:SF4	BNAA10G27800D PROTEIN	coord: 91..123 coord: 1..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g03470.1	Cp4.1LG08g03470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane