Cp4.1LG07g01340 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATATTTTAAATAGAGAAAAAAAAAATTAAATACAGCAATATTGATCTCGCTTGTAATCCACTCTCCATTAAAAAAAATTAAAAAAAGTTAAAAAAGAAAAAGAAATAAATAGAAACTTCCAGATCCTGAGGGTATTTTCGTCATTTCGGTTTTAAAAAAAGACATCTCTGGTTCGACGGCAGGGTTGGGAAGTCGGAAAGCGCTTCCGTCTGGTTTCTTCGTGGAGAGTAAAGCAGAAGCCATTAACAAATAGCTTCAGAGTGCTTTTGAAGCGAACTCAGACCAACTCCATTTCTTCATCTTCTTCGCTTCCATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTGCAATTCTTCCCAATTCCTTTCTTCTTCTTCTTCTTCTTCAATGGACAGAGCTACTCCTGTTCGGAAGCCTCACACCTCTACTGCAGATCTGCTCACTTGGCCGGAAGTTCCGCCGGCTGATTCCTCTGCGCTTTCTTCTTCTGCTTCTCGCTCTGCTCCGAGGTCTCATCAGGTACTTTCTACATTTTTATCTTTTTTCCTTTTCTTCTTTCCTTTCGTCTTCTTCTGCTTATTCTCTTTGTTTTTGTTGTTTTTGTAGCCCTCCCCTGGGATTAGTAAGGTCGTCTTTGGAGGTCAGGTCACGGATGAGGAGGTTGAGAGCTTGAACAAAAGGTGAGATCTAAATCGGTTTTGTTCTTGCTTATTTCATTCCTGTTCTTTTGGATAATTTTTGTTTCGGTTTCTTTCTTGTGCCGAATTGTGAGTACTGTGAATTGTTAAGGTGGAAACTCGAATGAGCTAATCTGTTTCGTTTCGGTGTTTTCTTGATATTGAGAAGACTGTTTTGTTCTCTCTCCCTATTTCTCATTCGCTGCTATTTTGTCGCTCTTTTTCAGTTGTGTAGCGCTTGTTGAATTTGTATCATTTCTGTAAACCTCCGATCTGCTTGCTTAGTTTTTAAAAATTGGCCAAGTTATTCAAATTTCAAATCTCTATCTCTTCCTCCTTGCGTGGTAATATTTGTTTTGCTCAAATGACTGCTGATTGGATCTCAAATCCGTATTCCTTTCTGGTTTTCAAGGCATTTTCACAAATCTTTGATCAAATTTGTTCGTCCTTCCCGCATCAATTGATTTTAACGTCATTTGAATGCAAATTTTCTAGTTGCTTTTGAGTCTTAACGGTTTACAATCTTGAATTTGCTGGAGTCGTTTAGCTTGAGTTTCATATGAGGCGTCTCATTTGTTGTTTAATTTGCAAACACCAGGAAACCCTGTTCTGGTTATAAAATGAAGGAGATGACTGGCAGTGGCATTTTTGTTGCAAACGAAGAAGATGATGAACTAGAATCTGGAAGCGCCAACCCTTCACAGAATAAAACAGGAATACGTATGTACCAGGTATCCATCGAAGAAGATCATCATTTATTGCAGTTTATCTGTGACTGTGAGAAGAATTTGTGTTTGGTTAAGGCTTTTCTAACTTCTATTCTTGACGGCTCGATCAACTGCAGCAAGCCTTGGCTGGGATTAGTCATATTTCATTCGGTGAAGAAGGAAGTGTTTCTCCTAAAAAACCAACTACTCTACCCGAGGTTGCGAAGCAGCGTGAGCTGAGCGGGAACCTAGAAAGCGATGCCGATGCAATGTTGAAGAAGCAGCTTTCTGATGCTAAATGCAAGGAGCTTAGTGGACATGATATATTCGCGCCTCCTCCTGAGATCTTACCCCGACCAACAACTGCACGCACTTTGGATTTAAAAGGAAGCATTGAGATTGGGGAGCCTGATAATGTAAGTAGTACTCTTCTGATCAAGTAATTTTCAGGATGGAATTTTAGTCCTTCTAATTTCAAATACATCCATTTTGAATGCACACCCCACAAACGACACTCTCTCATTTTGCTTAGAAATTACATAATTTAGTGTTAGGTTCTCACCATAGCTGCTCGTTCGTTCGTTCGTTCGTCAGGCAGCATGGATAGAAGGGTCTTGCATCAACCAATTTATCTTACTCGTTCTTTTGCATCTTAGTTTCCTGATGGGGTTAGAATCTTAATGATGAAATCCTAGGATTCCAGTTGGTTAATATACGTGCGACTAAGTTATCATAAGGGTAGTTCATCAACTAATTCACTCGTTCCTTTGCATCATATTTTCACGATGGGGCCAGAAGCTCACTCACAATGATGAAATCCTAGGATTCCAGTTTGCTAATATACTTGCAATCATTACTAATTGCTCTACGTGGGGTTGCTTGTTCTGAATAATTTAGCATGTCCCTGTTTTTTTTTTTTTTGTTAACTTTTCTTCCAAGTCTTTCTTCGAAGCATATAATATCATTTAATTAGTTAATATATCATCATTGCGAGCTTCTGTTATCTTCAGTACTAACATCCCTAGTTTTCATTCATCCCTTTATTAATTCTAATAAGGCCTGCGTTCCTTCTGATATTCCACATGGGATACCAACACAGATAAACGTGATCCCTGGTGAAGAACCTTCAGTAAAGACAGCAAAGAAGATATACGACAAGAAATTTTCGGAGTTATCAGGAAACGACATCTTCAAAGGCGACGTTCCTCCGTCGTCTGCAGAGAAACCATTGAGCGTCGCAAAATTACGCGAAATGAGTGGGAGCGACATATTTGCAGACGGGAAGGTAGAGACCCGAGACTACTTAGGCGGGGTACGCAAACCCCCGGGCGGAGAGAGCAGCATTGCATTGGTTTAAGTAATCTAGGTTCTAACCAAAACTCAATACTTTCAGTTGGTGGGGAGATGGATATTATGAAAATTGTGATCTGGTTTGGGTAATTATTATGTTTTAGGGTTAACTATGGAGTCTGCTAATTGAGTTATGTACTTGGTTAGTTGTGTGCAGTTTTATGTTGGTTGGTTGGTTGGTTGGTTGTCTTCTTTCTTCCTATTTTACTCTTTCCATCTCTTGGGGTTCTTCTCATTTGTTTATCATTATATTGATTAATTGATTCGGTTATTATGCTCAACCCTAAAC AAATATTTTAAATAGAGAAAAAAAAAATTAAATACAGCAATATTGATCTCGCTTGTAATCCACTCTCCATTAAAAAAAATTAAAAAAAGTTAAAAAAGAAAAAGAAATAAATAGAAACTTCCAGATCCTGAGGGTATTTTCGTCATTTCGGTTTTAAAAAAAGACATCTCTGGTTCGACGGCAGGGTTGGGAAGTCGGAAAGCGCTTCCGTCTGGTTTCTTCGTGGAGAGTAAAGCAGAAGCCATTAACAAATAGCTTCAGAGTGCTTTTGAAGCGAACTCAGACCAACTCCATTTCTTCATCTTCTTCGCTTCCATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTGCAATTCTTCCCAATTCCTTTCTTCTTCTTCTTCTTCTTCAATGGACAGAGCTACTCCTGTTCGGAAGCCTCACACCTCTACTGCAGATCTGCTCACTTGGCCGGAAGTTCCGCCGGCTGATTCCTCTGCGCTTTCTTCTTCTGCTTCTCGCTCTGCTCCGAGGTCTCATCAGCCCTCCCCTGGGATTAGTAAGGTCGTCTTTGGAGGTCAGGTCACGGATGAGGAGGTTGAGAGCTTGAACAAAAGGAAACCCTGTTCTGGTTATAAAATGAAGGAGATGACTGGCAGTGGCATTTTTGTTGCAAACGAAGAAGATGATGAACTAGAATCTGGAAGCGCCAACCCTTCACAGAATAAAACAGGAATACGTATGTACCAGCAAGCCTTGGCTGGGATTAGTCATATTTCATTCGGTGAAGAAGGAAGTGTTTCTCCTAAAAAACCAACTACTCTACCCGAGGTTGCGAAGCAGCGTGAGCTGAGCGGGAACCTAGAAAGCGATGCCGATGCAATGTTGAAGAAGCAGCTTTCTGATGCTAAATGCAAGGAGCTTAGTGGACATGATATATTCGCGCCTCCTCCTGAGATCTTACCCCGACCAACAACTGCACGCACTTTGGATTTAAAAGGAAGCATTGAGATTGGGGAGCCTGATAATATAAACGTGATCCCTGGTGAAGAACCTTCAGTAAAGACAGCAAAGAAGATATACGACAAGAAATTTTCGGAGTTATCAGGAAACGACATCTTCAAAGGCGACGTTCCTCCGTCGTCTGCAGAGAAACCATTGAGCGTCGCAAAATTACGCGAAATGAGTGGGAGCGACATATTTGCAGACGGGAAGGTAGAGACCCGAGACTACTTAGGCGGGGTACGCAAACCCCCGGGCGGAGAGAGCAGCATTGCATTGGTTTAAGTAATCTAGGTTCTAACCAAAACTCAATACTTTCAGTTGGTGGGGAGATGGATATTATGAAAATTGTGATCTGGTTTGGGTAATTATTATGTTTTAGGGTTAACTATGGAGTCTGCTAATTGAGTTATGTACTTGGTTAGTTGTGTGCAGTTTTATGTTGGTTGGTTGGTTGGTTGGTTGTCTTCTTTCTTCCTATTTTACTCTTTCCATCTCTTGGGGTTCTTCTCATTTGTTTATCATTATATTGATTAATTGATTCGGTTATTATGCTCAACCCTAAAC ATGGACAGAGCTACTCCTGTTCGGAAGCCTCACACCTCTACTGCAGATCTGCTCACTTGGCCGGAAGTTCCGCCGGCTGATTCCTCTGCGCTTTCTTCTTCTGCTTCTCGCTCTGCTCCGAGGTCTCATCAGCCCTCCCCTGGGATTAGTAAGGTCGTCTTTGGAGGTCAGGTCACGGATGAGGAGGTTGAGAGCTTGAACAAAAGGAAACCCTGTTCTGGTTATAAAATGAAGGAGATGACTGGCAGTGGCATTTTTGTTGCAAACGAAGAAGATGATGAACTAGAATCTGGAAGCGCCAACCCTTCACAGAATAAAACAGGAATACGTATGTACCAGCAAGCCTTGGCTGGGATTAGTCATATTTCATTCGGTGAAGAAGGAAGTGTTTCTCCTAAAAAACCAACTACTCTACCCGAGGTTGCGAAGCAGCGTGAGCTGAGCGGGAACCTAGAAAGCGATGCCGATGCAATGTTGAAGAAGCAGCTTTCTGATGCTAAATGCAAGGAGCTTAGTGGACATGATATATTCGCGCCTCCTCCTGAGATCTTACCCCGACCAACAACTGCACGCACTTTGGATTTAAAAGGAAGCATTGAGATTGGGGAGCCTGATAATATAAACGTGATCCCTGGTGAAGAACCTTCAGTAAAGACAGCAAAGAAGATATACGACAAGAAATTTTCGGAGTTATCAGGAAACGACATCTTCAAAGGCGACGTTCCTCCGTCGTCTGCAGAGAAACCATTGAGCGTCGCAAAATTACGCGAAATGAGTGGGAGCGACATATTTGCAGACGGGAAGGTAGAGACCCGAGACTACTTAGGCGGGGTACGCAAACCCCCGGGCGGAGAGAGCAGCATTGCATTGGTTTAA MDRATPVRKPHTSTADLLTWPEVPPADSSALSSSASRSAPRSHQPSPGISKVVFGGQVTDEEVESLNKRKPCSGYKMKEMTGSGIFVANEEDDELESGSANPSQNKTGIRMYQQALAGISHISFGEEGSVSPKKPTTLPEVAKQRELSGNLESDADAMLKKQLSDAKCKELSGHDIFAPPPEILPRPTTARTLDLKGSIEIGEPDNINVIPGEEPSVKTAKKIYDKKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSDIFADGKVETRDYLGGVRKPPGGESSIALV Homology
BLAST of Cp4.1LG07g01340 vs. ExPASy Swiss-Prot
Match: Q9SIE0 (DNA oxidative demethylase ALKBH2 OS=Arabidopsis thaliana OX=3702 GN=ALKBH2 PE=2 SV=2) HSP 1 Score: 52.4 bits (124), Expect = 1.0e-05 Identity = 29/58 (50.00%), Postives = 39/58 (67.24%), Query Frame = 0
BLAST of Cp4.1LG07g01340 vs. NCBI nr
Match: XP_022951840.1 (uncharacterized protein LOC111454570 [Cucurbita moschata] >XP_023002695.1 uncharacterized protein LOC111496478 [Cucurbita maxima] >XP_023537292.1 uncharacterized protein LOC111798406 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 572 bits (1475), Expect = 1.02e-205 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
BLAST of Cp4.1LG07g01340 vs. NCBI nr
Match: KAG6585290.1 (hypothetical protein SDJN03_18023, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 570 bits (1470), Expect = 5.90e-205 Identity = 289/291 (99.31%), Postives = 290/291 (99.66%), Query Frame = 0
BLAST of Cp4.1LG07g01340 vs. NCBI nr
Match: XP_038884071.1 (uncharacterized protein LOC120075008 [Benincasa hispida]) HSP 1 Score: 546 bits (1407), Expect = 2.37e-195 Identity = 276/291 (94.85%), Postives = 282/291 (96.91%), Query Frame = 0
BLAST of Cp4.1LG07g01340 vs. NCBI nr
Match: XP_004142997.1 (uncharacterized protein LOC101215119 [Cucumis sativus] >KGN62250.1 hypothetical protein Csa_018791 [Cucumis sativus]) HSP 1 Score: 542 bits (1396), Expect = 1.12e-193 Identity = 274/291 (94.16%), Postives = 280/291 (96.22%), Query Frame = 0
BLAST of Cp4.1LG07g01340 vs. NCBI nr
Match: XP_008445341.1 (PREDICTED: uncharacterized protein LOC103488402 [Cucumis melo] >KAA0064833.1 uncharacterized protein E6C27_scaffold82G001450 [Cucumis melo var. makuwa]) HSP 1 Score: 540 bits (1390), Expect = 9.22e-193 Identity = 273/291 (93.81%), Postives = 280/291 (96.22%), Query Frame = 0
BLAST of Cp4.1LG07g01340 vs. ExPASy TrEMBL
Match: A0A6J1KPP3 (uncharacterized protein LOC111496478 OS=Cucurbita maxima OX=3661 GN=LOC111496478 PE=4 SV=1) HSP 1 Score: 572 bits (1475), Expect = 4.94e-206 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
BLAST of Cp4.1LG07g01340 vs. ExPASy TrEMBL
Match: A0A6J1GK09 (uncharacterized protein LOC111454570 OS=Cucurbita moschata OX=3662 GN=LOC111454570 PE=4 SV=1) HSP 1 Score: 572 bits (1475), Expect = 4.94e-206 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
BLAST of Cp4.1LG07g01340 vs. ExPASy TrEMBL
Match: A0A0A0LK08 (DUF4057 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G345910 PE=4 SV=1) HSP 1 Score: 542 bits (1396), Expect = 5.44e-194 Identity = 274/291 (94.16%), Postives = 280/291 (96.22%), Query Frame = 0
BLAST of Cp4.1LG07g01340 vs. ExPASy TrEMBL
Match: A0A5A7V9J6 (DUF4057 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001450 PE=4 SV=1) HSP 1 Score: 540 bits (1390), Expect = 4.47e-193 Identity = 273/291 (93.81%), Postives = 280/291 (96.22%), Query Frame = 0
BLAST of Cp4.1LG07g01340 vs. ExPASy TrEMBL
Match: A0A1S3BD79 (uncharacterized protein LOC103488402 OS=Cucumis melo OX=3656 GN=LOC103488402 PE=4 SV=1) HSP 1 Score: 540 bits (1390), Expect = 4.47e-193 Identity = 273/291 (93.81%), Postives = 280/291 (96.22%), Query Frame = 0
BLAST of Cp4.1LG07g01340 vs. TAIR 10
Match: AT1G78150.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35780.1); Has 152 Blast hits to 146 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 367.5 bits (942), Expect = 1.0e-101 Identity = 198/291 (68.04%), Postives = 227/291 (78.01%), Query Frame = 0
BLAST of Cp4.1LG07g01340 vs. TAIR 10
Match: AT1G78150.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 367.5 bits (942), Expect = 1.0e-101 Identity = 198/291 (68.04%), Postives = 227/291 (78.01%), Query Frame = 0
BLAST of Cp4.1LG07g01340 vs. TAIR 10
Match: AT1G78150.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35780.1). ) HSP 1 Score: 352.1 bits (902), Expect = 4.4e-97 Identity = 198/320 (61.88%), Postives = 227/320 (70.94%), Query Frame = 0
BLAST of Cp4.1LG07g01340 vs. TAIR 10
Match: AT1G35780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78150.2); Has 145 Blast hits to 144 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 350.5 bits (898), Expect = 1.3e-96 Identity = 194/294 (65.99%), Postives = 222/294 (75.51%), Query Frame = 0
BLAST of Cp4.1LG07g01340 vs. TAIR 10
Match: AT4G39860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22270.1); Has 152 Blast hits to 146 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 146; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 334.7 bits (857), Expect = 7.3e-92 Identity = 180/307 (58.63%), Postives = 219/307 (71.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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