Cp4.1LG06g05980 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g05980
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	alkylated DNA repair protein alkB homolog 8
Location	Cp4.1LG06: 3629339 .. 3631498 (-)
RNA-Seq Expression	Cp4.1LG06g05980
Synteny	Cp4.1LG06g05980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTAAACAATAGAAAAACCAAAAGTTTATTAATCTGATAAATACTTTATATTAATGGATAATTTAGGTATTAATAGATATATACCTAAAATTTTAACTTAATTATGATTAAAAATATATATTTTTTAATTCAATAATTACAGAGTAATCCTTATTCAATTTCAAGAACAAAACAGGTGATTTGTTTATTTATTTTTAAATTTAAAATTTAAGAAAAATACTGAATAAAAAAACTTGGCTGCCGGGAACCCAAATCGCATTCACCCGCCAAACTCTTCCCCGCAAATGGACTTGCCAAGATTCGCCCGTCCAAGGGGAGATAATGGATCTTCATCTTCTAGCCCTAATCTCTACGTCGCCAACTGTGGACCGGCCGTCGGAATCAGCCACCGCGCAGTTGCGGCGGTTTTTGGCGATTTTGGGGACGTGAAAGGGGTTCACGCAGCTGACGAGACCGGCACTCGCGTCATTGTATGCTTTTCCGAAGAATCCAGCGCCCGAGCCGCTCTTGAGGCGCTACACGGCCGCCCTTGCTCTCTTCTCGGAGGCCGGACTTTGCACATACGCTATTCCATCATCAGGCCGTCCATTTCGCAGCTTAATGATTCTGTTTCAGTTTCTTTGTCGGCTTCGGAGTTGGACATTCCTGGACTTTACCTATTGCACGACTTCGTCACTGCTAAAGAAGAGGAGGTGAGCGTTTTAGTTGGATTATGAGTACTGTCAAAGGATTCGACCTTTTTTCCCCCTTTGTTTACGATTTTTCGTGCTTGTAAAGGAATTGCTTTCGGAAGTTGATGCTCGGCCTTGGAATAATCTGGCGAAACGTAGAGTTCAGCATTATGGATATGAATTTTGCTATCAAGTAAGTGGCAGAACTTTTTGCCTTTTCCTTATTCCTCCTGTCTGTTGTACTGAATGATTTTGCAACGACAGGACTCGTGATTACTGAAAATCAGTTGGTTTTGTCTCTGTTTGTTTATTGTAGACGAGAAATGTTAATACTAGACATCAGTTGGGCGAACTTCCATCATTTGTTTCTCATGTAGTTGATCGGATCTCCATGTTTCCAAACGCTGAGGATGTTGCAGATGCTGTTCTTGATCAATTGACTGTATGCACTGTGTTTTTGATGAATTACTCTAAACTTGGTTGCTTGTAGTTGCTTAATTGCTTGTGCGCAATCTTTGAACTTTGTGATTGTAGCTCTTGCTATGATATCTGAAGTCGTTGTCATGTTTAGTATGAGACTGAAATCAATATCACATTACAGGTTAATGAATACCCACCTGGGGTGGGTTTGTCTCCTCATATAGACACCCATTCTGCATTTGAAGGATTGATTTTCAGCCTTTCCTTAGCAGGGCCATGCATTATGGAGTTTAGGAGGTATACCGAAGGCGCTTGGCACAAATGCCCTTCAAATATAGATTTGAAAATGGAGAATTCAGTAAACGACTCAAATTATCTGAGGAAAGCCATTTATCTTCCTCCTCGGTCGATGCTCCTACTGTCTGGAGAGGCACGTTACGCTTGGCATCATTACATTCCTCACCACAAGGTATATCAGATCGTCCATGAACAATTGCTGTTTTAGTGCGGTCGATTTACGAAATCTGTAGAGTTATCTGTTTATACATGTTAACAGCTATGAAGGGGTCGAGTAGTTTATTTTCAAATAGTTGGACCAATGGTTGAGGATGAGTTACACATTTGGATTTCTTTGTAGTACTTTGATAGTTATCTACAAAGATTATAGTCTTGTTTATTTCAAATGTTGTAGAGGTTTAAATTGTGTTCTTGTTGGATAGATTAAGTGAGGGTAAATCAGGCTAGATACCATGGGTGTAAGCACGATTATGTGTCGAATAACATTATCACTTAGCTATTGAATGAAAGAAACTGTGAACTTATACATTCTATTCTCATTTATGAAGTTGAAATTGTGTAAATGTTCTGTAATAGATTGACATGGTGAAGGACAGTGCAATCAGAAGGGGTCCTAGGAGGGTTTCTTTTACGTTTCGCAAGGTGAGTAGATTTAATGCTTATGTTCTTTCCGTTCGTCTCGTACATGATGAGCCTTACTTACCTGCATCTATTATTCATGATGTCAAGATGGCAGTTATCCTGCCTCATGGCAATTCTAAAGCTTTATAA

mRNA sequence

TATTAAACAATAGAAAAACCAAAAGTTTATTAATCTGATAAATACTTTATATTAATGGATAATTTAGGTATTAATAGATATATACCTAAAATTTTAACTTAATTATGATTAAAAATATATATTTTTTAATTCAATAATTACAGAGTAATCCTTATTCAATTTCAAGAACAAAACAGGTGATTTGTTTATTTATTTTTAAATTTAAAATTTAAGAAAAATACTGAATAAAAAAACTTGGCTGCCGGGAACCCAAATCGCATTCACCCGCCAAACTCTTCCCCGCAAATGGACTTGCCAAGATTCGCCCGTCCAAGGGGAGATAATGGATCTTCATCTTCTAGCCCTAATCTCTACGTCGCCAACTGTGGACCGGCCGTCGGAATCAGCCACCGCGCAGTTGCGGCGGTTTTTGGCGATTTTGGGGACGTGAAAGGGGTTCACGCAGCTGACGAGACCGGCACTCGCGTCATTGTATGCTTTTCCGAAGAATCCAGCGCCCGAGCCGCTCTTGAGGCGCTACACGGCCGCCCTTGCTCTCTTCTCGGAGGCCGGACTTTGCACATACGCTATTCCATCATCAGGCCGTCCATTTCGCAGCTTAATGATTCTGTTTCAGTTTCTTTGTCGGCTTCGGAGTTGGACATTCCTGGACTTTACCTATTGCACGACTTCGTCACTGCTAAAGAAGAGGAGGAATTGCTTTCGGAAGTTGATGCTCGGCCTTGGAATAATCTGGCGAAACGTAGAGTTCAGCATTATGGATATGAATTTTGCTATCAAACGAGAAATGTTAATACTAGACATCAGTTGGGCGAACTTCCATCATTTGTTTCTCATGTAGTTGATCGGATCTCCATGTTTCCAAACGCTGAGGATGTTGCAGATGCTGTTCTTGATCAATTGACTGTTAATGAATACCCACCTGGGGTGGGTTTGTCTCCTCATATAGACACCCATTCTGCATTTGAAGGATTGATTTTCAGCCTTTCCTTAGCAGGGCCATGCATTATGGAGTTTAGGAGGTATACCGAAGGCGCTTGGCACAAATGCCCTTCAAATATAGATTTGAAAATGGAGAATTCAGTAAACGACTCAAATTATCTGAGGAAAGCCATTTATCTTCCTCCTCGGTCGATGCTCCTACTGTCTGGAGAGGCACGTTACGCTTGGCATCATTACATTCCTCACCACAAGATTGACATGGTGAAGGACAGTGCAATCAGAAGGGGTCCTAGGAGGGTTTCTTTTACGTTTCGCAAGGTGAGTAGATTTAATGCTTATGTTCTTTCCGTTCGTCTCGTACATGATGAGCCTTACTTACCTGCATCTATTATTCATGATGTCAAGATGGCAGTTATCCTGCCTCATGGCAATTCTAAAGCTTTATAA

Coding sequence (CDS)

ATGGACTTGCCAAGATTCGCCCGTCCAAGGGGAGATAATGGATCTTCATCTTCTAGCCCTAATCTCTACGTCGCCAACTGTGGACCGGCCGTCGGAATCAGCCACCGCGCAGTTGCGGCGGTTTTTGGCGATTTTGGGGACGTGAAAGGGGTTCACGCAGCTGACGAGACCGGCACTCGCGTCATTGTATGCTTTTCCGAAGAATCCAGCGCCCGAGCCGCTCTTGAGGCGCTACACGGCCGCCCTTGCTCTCTTCTCGGAGGCCGGACTTTGCACATACGCTATTCCATCATCAGGCCGTCCATTTCGCAGCTTAATGATTCTGTTTCAGTTTCTTTGTCGGCTTCGGAGTTGGACATTCCTGGACTTTACCTATTGCACGACTTCGTCACTGCTAAAGAAGAGGAGGAATTGCTTTCGGAAGTTGATGCTCGGCCTTGGAATAATCTGGCGAAACGTAGAGTTCAGCATTATGGATATGAATTTTGCTATCAAACGAGAAATGTTAATACTAGACATCAGTTGGGCGAACTTCCATCATTTGTTTCTCATGTAGTTGATCGGATCTCCATGTTTCCAAACGCTGAGGATGTTGCAGATGCTGTTCTTGATCAATTGACTGTTAATGAATACCCACCTGGGGTGGGTTTGTCTCCTCATATAGACACCCATTCTGCATTTGAAGGATTGATTTTCAGCCTTTCCTTAGCAGGGCCATGCATTATGGAGTTTAGGAGGTATACCGAAGGCGCTTGGCACAAATGCCCTTCAAATATAGATTTGAAAATGGAGAATTCAGTAAACGACTCAAATTATCTGAGGAAAGCCATTTATCTTCCTCCTCGGTCGATGCTCCTACTGTCTGGAGAGGCACGTTACGCTTGGCATCATTACATTCCTCACCACAAGATTGACATGGTGAAGGACAGTGCAATCAGAAGGGGTCCTAGGAGGGTTTCTTTTACGTTTCGCAAGGTGAGTAGATTTAATGCTTATGTTCTTTCCGTTCGTCTCGTACATGATGAGCCTTACTTACCTGCATCTATTATTCATGATGTCAAGATGGCAGTTATCCTGCCTCATGGCAATTCTAAAGCTTTATAA

Protein sequence

MDLPRFARPRGDNGSSSSSPNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGTRVIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDSVSVSLSASELDIPGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELPSFVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPCIMEFRRYTEGAWHKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYIPHHKIDMVKDSAIRRGPRRVSFTFRKVSRFNAYVLSVRLVHDEPYLPASIIHDVKMAVILPHGNSKAL

Homology

[Close]

BLAST of Cp4.1LG06g05980 vs. ExPASy Swiss-Prot
Match: Q8RWY1 (Alkylated DNA repair protein ALKBH8 homolog OS=Arabidopsis thaliana OX=3702 GN=ALKBH8 PE=2 SV=2)

HSP 1 Score: 423.3 bits (1087), Expect = 2.8e-117
Identity = 217/329 (65.96%), Postives = 258/329 (78.42%), Query Frame = 0


Query: 4   PRFARPRGDNGSSSS----SPNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGT 63
           PRF RP   + SS S    S NLYVANCGPAVG++H A+AAVF +FG+V GV+AAD++G 
Sbjct: 4   PRFVRPTQSSPSSISGEPNSSNLYVANCGPAVGLTHNAIAAVFAEFGEVNGVYAADDSGV 63

Query: 64  RVIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIR-PSISQLNDSVSVSLSASEL 123
           RVIV F++  SA+AALEAL GRPC  L GR+LHIRYS+++ PS +Q+ND V VSL  SEL
Sbjct: 64  RVIVSFADPFSAKAALEALSGRPCPDLKGRSLHIRYSVLQLPSETQVNDCVPVSLIDSEL 123

Query: 124 DIPGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGEL 183
           +IPGL+LL DFVT  EE++LL+ VDAR W  LAKRRVQHYGYEFCY TRNV+T+ +LGEL
Sbjct: 124 NIPGLFLLPDFVTVAEEQQLLAAVDARHWIGLAKRRVQHYGYEFCYGTRNVDTKKRLGEL 183

Query: 184 PSFVSHVVDRISMFPNAED-VADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLA 243
           PSFVS +++RI +FPN ++  A   LDQLTVNEYP GVGLSPHIDTHSAFE  IFSLSLA
Sbjct: 184 PSFVSPILERIYLFPNFDNGSASLNLDQLTVNEYPSGVGLSPHIDTHSAFEDCIFSLSLA 243

Query: 244 GPCIMEFRRYTEGAWHKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHH 303
           GPCIMEFRRY+   W    ++ +        DS+ ++KA+YLPPRSMLLLSGEARYAW+H
Sbjct: 244 GPCIMEFRRYSVSTWKASTTDAE-----KSGDSSCIKKALYLPPRSMLLLSGEARYAWNH 303

Query: 304 YIPHHKIDMVKDSAIRRGPRRVSFTFRKV 327
           YIPHHKID VKD  IRR  RRVSFT RKV
Sbjct: 304 YIPHHKIDKVKDKVIRRSSRRVSFTLRKV 327

[Close]

BLAST of Cp4.1LG06g05980 vs. ExPASy Swiss-Prot
Match: Q07G10 (Alkylated DNA repair protein alkB homolog 8 OS=Xenopus tropicalis OX=8364 GN=alkbh8 PE=2 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 1.6e-27
Identity = 99/329 (30.09%), Postives = 148/329 (44.98%), Query Frame = 0


Query: 19  SPNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGTRVIVCFSEESSARAALEAL 78
           S +L VAN G   G+S + + AV    G V+ +           V +S    A  A  +L
Sbjct: 42  SQSLVVANGGLGNGVSRQQLLAVLERCGKVETL-LMPPNKPYAFVTYSSAEEAIKAYSSL 101

Query: 79  HGRP-CSLLGGRTLHIRYSIIRPSISQLNDSVSVSLSASELDIPGLYLLHDFVTAKEEEE 138
            G+  C     + + +  S +   +  + + +S SL       PGL ++ DFV+ ++E  
Sbjct: 102 SGQELCGEDAEQPITLYLSFVEKVV--VKEVLSPSLP------PGLIIVEDFVSPEQERT 161

Query: 139 LLSEVD----ARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQL-GELPSFVSHVVDRISMF 198
           +L  +D         +L  R+V+HYGYEF Y   NV+    L G LP F +  + +    
Sbjct: 162 MLESIDWDSETSSQKSLKHRQVKHYGYEFRYDNNNVDKDKPLPGGLPDFCTEALRKCVQ- 221

Query: 199 PNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPCIMEFRRYTEGAW 258
                +     DQLT+N+Y PG G+ PH+DTHSAFE  I SLSL    +M+F+       
Sbjct: 222 ---RGLIKHDPDQLTINQYEPGQGIPPHVDTHSAFEDEILSLSLGAEIVMDFKH------ 281

Query: 259 HKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYIPHHKIDMVKDS-- 318
                             N     + LP RS+L++SGE+RY W H I   K D+++ S  
Sbjct: 282 -----------------PNGSVVPVMLPQRSLLIMSGESRYLWTHGITPRKFDVIQVSEG 334

Query: 319 -------------AIRRGPRRVSFTFRKV 327
                         + +   R SFTFRKV
Sbjct: 342 QTVGTISGNSGELTLSKRSTRTSFTFRKV 334

[Close]

BLAST of Cp4.1LG06g05980 vs. ExPASy Swiss-Prot
Match: Q80Y20 (Alkylated DNA repair protein alkB homolog 8 OS=Mus musculus OX=10090 GN=Alkbh8 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.2e-25
Identity = 78/234 (33.33%), Postives = 116/234 (49.57%), Query Frame = 0


Query: 121 PGLYLLHDFVTAKEEEELLSEVDARPW----------NNLAKRRVQHYGYEFCYQTRNVN 180
           PGL ++ + ++++EE++LL  V+   W           +L  RRV+H+GYEF Y++  V+
Sbjct: 135 PGLLVVEEIISSEEEKKLLESVN---WTEDTGNQNFQRSLKHRRVKHFGYEFHYESNTVD 194

Query: 181 TRHQL-GELPSFVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEG 240
               L G LP   S +++++      E       DQLT+N+Y PG G+  HIDTHSAFE 
Sbjct: 195 KDKPLPGGLPEVCSSILEKLL----KEGYIKHKPDQLTINQYEPGHGIPAHIDTHSAFED 254

Query: 241 LIFSLSLAGPCIMEFRRYTEGAWHKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSG 300
            I SLSL    +M+F         K P  + ++              + LP RS+L+++G
Sbjct: 255 EIISLSLGSAIVMDF---------KHPEGVTVQ--------------VMLPRRSLLVMTG 314

Query: 301 EARYAWHHYIPHHKIDMVK---------------DSAIRRGPRRVSFTFRKVSR 329
           E+RY W H I   K D V+               D  + +   R SFTFRKV R
Sbjct: 315 ESRYLWTHGITPRKFDTVQASEQFKGGIITSDIGDLTLSKRGMRTSFTFRKVRR 338

[Close]

BLAST of Cp4.1LG06g05980 vs. ExPASy Swiss-Prot
Match: Q95K79 (Alkylated DNA repair protein alkB homolog 8 OS=Macaca fascicularis OX=9541 GN=ALKBH8 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.3e-23
Identity = 75/229 (32.75%), Postives = 109/229 (47.60%), Query Frame = 0


Query: 121 PGLYLLHDFVTAKEEEELLSEVD-------ARPWNNLAKRRVQHYGYEFCYQTRNVNTRH 180
           PGL ++ + ++++EE+ LL  VD            +L  RRV+H+GYEF Y+  NV+   
Sbjct: 135 PGLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDK 194

Query: 181 QL-GELPSFVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIF 240
            L G LP      +++       E       DQ+T+N+Y PG G+  HIDTHSAFE  I 
Sbjct: 195 PLPGGLPDICDSFLEKWL----REGYIKHKPDQMTINQYEPGQGIPAHIDTHSAFEDEIV 254

Query: 241 SLSLAGPCIMEFRRYTEGAWHKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEAR 300
           SLSL    +M+F ++ +G                          + LP RS+L+++GE+R
Sbjct: 255 SLSLGSEIVMDF-KHPDGT----------------------AVPVMLPRRSLLVMTGESR 314

Query: 301 YAWHHYIPHHKIDMVK---------------DSAIRRGPRRVSFTFRKV 327
           Y W H I   K D V+               D  + +   R SFTFRKV
Sbjct: 315 YLWTHGITCRKFDTVQASENHKSGIITSDVGDLTLSKRGLRTSFTFRKV 336

[Close]

BLAST of Cp4.1LG06g05980 vs. ExPASy Swiss-Prot
Match: A1A4L5 (Alkylated DNA repair protein alkB homolog 8 OS=Bos taurus OX=9913 GN=ALKBH8 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.0e-23
Identity = 76/229 (33.19%), Postives = 112/229 (48.91%), Query Frame = 0


Query: 121 PGLYLLHDFVTAKEEEELLSEV----DARPWN---NLAKRRVQHYGYEFCYQTRNVNTRH 180
           PGL ++ + +++++E+ LL  V    D    N   +L  RRV+H+GYEF Y+  NV+   
Sbjct: 135 PGLKVIEEIISSEDEKMLLESVNWTEDTENQNFQKSLKHRRVKHFGYEFHYENNNVDKDK 194

Query: 181 QL-GELPSFVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIF 240
            L G LP     ++++       E       DQLT+N+Y PG G+  HIDTHSAFE  I 
Sbjct: 195 PLPGGLPDICESILEKWL----KEGFIKHKPDQLTINQYEPGHGIPAHIDTHSAFEDEII 254

Query: 241 SLSLAGPCIMEFRRYTEGAWHKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEAR 300
           SLSL    +M+F ++ +G                      +   + LP RS+L+++GE+R
Sbjct: 255 SLSLGSEIVMDF-KHPDG----------------------MTVPVMLPCRSLLVMTGESR 314

Query: 301 YAWHHYIPHHKIDM---------------VKDSAIRRGPRRVSFTFRKV 327
           Y W H I   K D                V+D  + +   R SFTFRKV
Sbjct: 315 YLWTHGITPRKFDTVQASKGHKSGIITSDVEDLTLNKRGIRTSFTFRKV 336

[Close]

BLAST of Cp4.1LG06g05980 vs. NCBI nr
Match: XP_023536576.1 (alkylated DNA repair protein alkB homolog 8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 664 bits (1712), Expect = 1.13e-239
Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0


Query: 1   MDLPRFARPRGDNGSSSSSPNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGTR 60
           MDLPRFARPRGDNGSSSSSPNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGTR
Sbjct: 1   MDLPRFARPRGDNGSSSSSPNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGTR 60

Query: 61  VIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDSVSVSLSASELDI 120
           VIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDSVSVSLSASELDI
Sbjct: 61  VIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDSVSVSLSASELDI 120

Query: 121 PGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELPS 180
           PGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELPS
Sbjct: 121 PGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELPS 180

Query: 181 FVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC 240
           FVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC
Sbjct: 181 FVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC 240

Query: 241 IMEFRRYTEGAWHKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYIP 300
           IMEFRRYTEGAWHKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYIP
Sbjct: 241 IMEFRRYTEGAWHKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYIP 300

Query: 301 HHKIDMVKDSAIRRGPRRVSFTFRKV 326
           HHKIDMVKDSAIRRGPRRVSFTFRKV
Sbjct: 301 HHKIDMVKDSAIRRGPRRVSFTFRKV 326

[Close]

BLAST of Cp4.1LG06g05980 vs. NCBI nr
Match: XP_022936765.1 (alkylated DNA repair protein alkB homolog 8 [Cucurbita moschata])

HSP 1 Score: 659 bits (1699), Expect = 1.09e-237
Identity = 322/326 (98.77%), Postives = 325/326 (99.69%), Query Frame = 0


Query: 1   MDLPRFARPRGDNGSSSSSPNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGTR 60
           MDLPRFARPRGDNGSSSSSPNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGTR
Sbjct: 1   MDLPRFARPRGDNGSSSSSPNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGTR 60

Query: 61  VIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDSVSVSLSASELDI 120
           VIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDS+SVSLSASELDI
Sbjct: 61  VIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDSISVSLSASELDI 120

Query: 121 PGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELPS 180
           PGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELPS
Sbjct: 121 PGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELPS 180

Query: 181 FVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC 240
           FVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC
Sbjct: 181 FVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC 240

Query: 241 IMEFRRYTEGAWHKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYIP 300
           IMEFRRYTEG WHKCPS+IDLKMENSVNDSNYLR+AIYLPPRSMLLLSGEARYAWHHYIP
Sbjct: 241 IMEFRRYTEGTWHKCPSSIDLKMENSVNDSNYLRRAIYLPPRSMLLLSGEARYAWHHYIP 300

Query: 301 HHKIDMVKDSAIRRGPRRVSFTFRKV 326
           HHKIDMVKDSAIRRGPRRVSFTFRKV
Sbjct: 301 HHKIDMVKDSAIRRGPRRVSFTFRKV 326

[Close]

BLAST of Cp4.1LG06g05980 vs. NCBI nr
Match: KAG6591851.1 (Alkylated DNA repair protein ALKBH8-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 655 bits (1689), Expect = 3.63e-236
Identity = 320/326 (98.16%), Postives = 323/326 (99.08%), Query Frame = 0


Query: 1   MDLPRFARPRGDNGSSSSSPNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGTR 60
           MDLPRFARPRGDNGSSSSSPNLYVANCGPAVGISHR VAAVFGDFGDVKGVHAADETGTR
Sbjct: 1   MDLPRFARPRGDNGSSSSSPNLYVANCGPAVGISHRTVAAVFGDFGDVKGVHAADETGTR 60

Query: 61  VIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDSVSVSLSASELDI 120
           VIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDSVSVSLSASELDI
Sbjct: 61  VIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDSVSVSLSASELDI 120

Query: 121 PGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELPS 180
           PGLYLLHDFVTAKEEE+LL EVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELPS
Sbjct: 121 PGLYLLHDFVTAKEEEDLLLEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELPS 180

Query: 181 FVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC 240
           FVSHVVDRISMFPNAEDVADA+LDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC
Sbjct: 181 FVSHVVDRISMFPNAEDVADAILDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC 240

Query: 241 IMEFRRYTEGAWHKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYIP 300
           IMEFRRYTEG WHKCPS+IDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYIP
Sbjct: 241 IMEFRRYTEGTWHKCPSSIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYIP 300

Query: 301 HHKIDMVKDSAIRRGPRRVSFTFRKV 326
           HHKIDMVKDSAIRRGPRRVSFTFRKV
Sbjct: 301 HHKIDMVKDSAIRRGPRRVSFTFRKV 326

[Close]

BLAST of Cp4.1LG06g05980 vs. NCBI nr
Match: KAG7024716.1 (Alkylated DNA repair protein alkB-like 8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 654 bits (1688), Expect = 5.16e-236
Identity = 319/326 (97.85%), Postives = 323/326 (99.08%), Query Frame = 0


Query: 1   MDLPRFARPRGDNGSSSSSPNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGTR 60
           MDLPRFARPRGDNGSSSSSPNLYVANCGPAVGISHR VAAVFGDFGDVKGVHAADETGTR
Sbjct: 1   MDLPRFARPRGDNGSSSSSPNLYVANCGPAVGISHRTVAAVFGDFGDVKGVHAADETGTR 60

Query: 61  VIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDSVSVSLSASELDI 120
           V+VCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDSVSVSLSASELDI
Sbjct: 61  VVVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDSVSVSLSASELDI 120

Query: 121 PGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELPS 180
           PGLYLLHDFVTAKEEE+LL EVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELPS
Sbjct: 121 PGLYLLHDFVTAKEEEDLLLEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELPS 180

Query: 181 FVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC 240
           FVSHVVDRISMFPNAEDVADA+LDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC
Sbjct: 181 FVSHVVDRISMFPNAEDVADAILDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC 240

Query: 241 IMEFRRYTEGAWHKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYIP 300
           IMEFRRYTEG WHKCPS+IDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYIP
Sbjct: 241 IMEFRRYTEGTWHKCPSSIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYIP 300

Query: 301 HHKIDMVKDSAIRRGPRRVSFTFRKV 326
           HHKIDMVKDSAIRRGPRRVSFTFRKV
Sbjct: 301 HHKIDMVKDSAIRRGPRRVSFTFRKV 326

[Close]

BLAST of Cp4.1LG06g05980 vs. NCBI nr
Match: XP_022976809.1 (alkylated DNA repair protein alkB homolog 8 isoform X1 [Cucurbita maxima])

HSP 1 Score: 646 bits (1666), Expect = 1.16e-232
Identity = 316/326 (96.93%), Postives = 321/326 (98.47%), Query Frame = 0


Query: 1   MDLPRFARPRGDNGSSSSSPNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGTR 60
           MDLPRFARPRG+NGSSSSSPNLYVANCGPAVGISHR VAAVFGDFGDVKGVHAADETGTR
Sbjct: 1   MDLPRFARPRGENGSSSSSPNLYVANCGPAVGISHRTVAAVFGDFGDVKGVHAADETGTR 60

Query: 61  VIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDSVSVSLSASELDI 120
           VIVCFSEESSARAALEALHGRPC LLGGRTLHIRYSIIRPSISQLNDSVSVSLSASEL+I
Sbjct: 61  VIVCFSEESSARAALEALHGRPCPLLGGRTLHIRYSIIRPSISQLNDSVSVSLSASELNI 120

Query: 121 PGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELPS 180
           PGLYLLHDFVTAKEEEELL EVDARPWNNLAKRRVQHYGYEFCYQTRNVNT+HQLG LPS
Sbjct: 121 PGLYLLHDFVTAKEEEELLLEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTKHQLGGLPS 180

Query: 181 FVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC 240
           FVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC
Sbjct: 181 FVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC 240

Query: 241 IMEFRRYTEGAWHKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYIP 300
           IMEFRRYTEG WHKCPS+IDLKMENSVNDSNYLR+AIYLPPRSMLLLSGEARYAWHHYIP
Sbjct: 241 IMEFRRYTEGTWHKCPSSIDLKMENSVNDSNYLRRAIYLPPRSMLLLSGEARYAWHHYIP 300

Query: 301 HHKIDMVKDSAIRRGPRRVSFTFRKV 326
           HHKIDMVKDSAIRRGPRRVSFTFRKV
Sbjct: 301 HHKIDMVKDSAIRRGPRRVSFTFRKV 326

[Close]

BLAST of Cp4.1LG06g05980 vs. ExPASy TrEMBL
Match: A0A6J1FEN4 (alkylated DNA repair protein alkB homolog 8 OS=Cucurbita moschata OX=3662 GN=LOC111443258 PE=3 SV=1)

HSP 1 Score: 659 bits (1699), Expect = 5.26e-238
Identity = 322/326 (98.77%), Postives = 325/326 (99.69%), Query Frame = 0


Query: 1   MDLPRFARPRGDNGSSSSSPNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGTR 60
           MDLPRFARPRGDNGSSSSSPNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGTR
Sbjct: 1   MDLPRFARPRGDNGSSSSSPNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGTR 60

Query: 61  VIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDSVSVSLSASELDI 120
           VIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDS+SVSLSASELDI
Sbjct: 61  VIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDSISVSLSASELDI 120

Query: 121 PGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELPS 180
           PGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELPS
Sbjct: 121 PGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELPS 180

Query: 181 FVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC 240
           FVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC
Sbjct: 181 FVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC 240

Query: 241 IMEFRRYTEGAWHKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYIP 300
           IMEFRRYTEG WHKCPS+IDLKMENSVNDSNYLR+AIYLPPRSMLLLSGEARYAWHHYIP
Sbjct: 241 IMEFRRYTEGTWHKCPSSIDLKMENSVNDSNYLRRAIYLPPRSMLLLSGEARYAWHHYIP 300

Query: 301 HHKIDMVKDSAIRRGPRRVSFTFRKV 326
           HHKIDMVKDSAIRRGPRRVSFTFRKV
Sbjct: 301 HHKIDMVKDSAIRRGPRRVSFTFRKV 326

[Close]

BLAST of Cp4.1LG06g05980 vs. ExPASy TrEMBL
Match: A0A6J1IPP9 (alkylated DNA repair protein alkB homolog 8 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477075 PE=3 SV=1)

HSP 1 Score: 646 bits (1666), Expect = 5.62e-233
Identity = 316/326 (96.93%), Postives = 321/326 (98.47%), Query Frame = 0


Query: 1   MDLPRFARPRGDNGSSSSSPNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGTR 60
           MDLPRFARPRG+NGSSSSSPNLYVANCGPAVGISHR VAAVFGDFGDVKGVHAADETGTR
Sbjct: 1   MDLPRFARPRGENGSSSSSPNLYVANCGPAVGISHRTVAAVFGDFGDVKGVHAADETGTR 60

Query: 61  VIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDSVSVSLSASELDI 120
           VIVCFSEESSARAALEALHGRPC LLGGRTLHIRYSIIRPSISQLNDSVSVSLSASEL+I
Sbjct: 61  VIVCFSEESSARAALEALHGRPCPLLGGRTLHIRYSIIRPSISQLNDSVSVSLSASELNI 120

Query: 121 PGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELPS 180
           PGLYLLHDFVTAKEEEELL EVDARPWNNLAKRRVQHYGYEFCYQTRNVNT+HQLG LPS
Sbjct: 121 PGLYLLHDFVTAKEEEELLLEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTKHQLGGLPS 180

Query: 181 FVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC 240
           FVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC
Sbjct: 181 FVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC 240

Query: 241 IMEFRRYTEGAWHKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYIP 300
           IMEFRRYTEG WHKCPS+IDLKMENSVNDSNYLR+AIYLPPRSMLLLSGEARYAWHHYIP
Sbjct: 241 IMEFRRYTEGTWHKCPSSIDLKMENSVNDSNYLRRAIYLPPRSMLLLSGEARYAWHHYIP 300

Query: 301 HHKIDMVKDSAIRRGPRRVSFTFRKV 326
           HHKIDMVKDSAIRRGPRRVSFTFRKV
Sbjct: 301 HHKIDMVKDSAIRRGPRRVSFTFRKV 326

[Close]

BLAST of Cp4.1LG06g05980 vs. ExPASy TrEMBL
Match: A0A5D3BS48 (Alkylated DNA repair protein alkB-like protein 8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00710 PE=3 SV=1)

HSP 1 Score: 627 bits (1616), Expect = 5.48e-225
Identity = 316/367 (86.10%), Postives = 329/367 (89.65%), Query Frame = 0


Query: 1   MDLPRFARPRGDNGSSSSSPNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGTR 60
           M+LPRF RP   NGSSSS P LYVANCGPAVGISH  +AAVF  FG VKGVHAAD+TG R
Sbjct: 1   MELPRFTRPNQHNGSSSS-PILYVANCGPAVGISHPTIAAVFAHFGHVKGVHAADDTGAR 60

Query: 61  VIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDSVSVSLSASELDI 120
           VIVCFSEESSA+AALE LHGRPC LLGGRTLHIRYSIIRPSISQ NDSVSVSLSASELDI
Sbjct: 61  VIVCFSEESSAQAALETLHGRPCPLLGGRTLHIRYSIIRPSISQPNDSVSVSLSASELDI 120

Query: 121 PGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELPS 180
           PGL+LLHDFV AKEEE+LL EVDARPWNNLAKRRVQHYGYEFCYQTRNVNT+HQLGELP 
Sbjct: 121 PGLFLLHDFVNAKEEEDLLREVDARPWNNLAKRRVQHYGYEFCYQTRNVNTKHQLGELPP 180

Query: 181 FVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC 240
           FVSHVVDRIS+FPN EDVADA LDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC
Sbjct: 181 FVSHVVDRISLFPNTEDVADASLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC 240

Query: 241 IMEFRRYTEGAWHKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYIP 300
           IMEFRRY EGAWH+ P +IDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYIP
Sbjct: 241 IMEFRRYPEGAWHEFPLSIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYIP 300

Query: 301 HHKIDMVKDSAIRRGPRRVSFTFRKVSRFNAYVLSVRLVHDEPYLPASIIHDVKMAVILP 360
           HHKIDMVKDS+IRR PRRVSFTFRKV R NAYVLS+ LV  E  L A II DVK AVI  
Sbjct: 301 HHKIDMVKDSSIRRAPRRVSFTFRKVGRDNAYVLSIPLVPVELTLHAFIIIDVKTAVIST 360

Query: 361 HGNSKAL 367
           HGNS+ L
Sbjct: 361 HGNSEIL 366

[Close]

BLAST of Cp4.1LG06g05980 vs. ExPASy TrEMBL
Match: A0A0A0L3H6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G669210 PE=3 SV=1)

HSP 1 Score: 593 bits (1529), Expect = 4.34e-212
Identity = 293/327 (89.60%), Postives = 304/327 (92.97%), Query Frame = 0


Query: 1   MDLPRFARPRGDNGSSSSS-PNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGT 60
           M+LPRF+RP  D GSSSSS P LYVANCGPAVGISH A+AAVF  FG VKGVH AD+TG 
Sbjct: 1   MELPRFSRPNQDYGSSSSSTPILYVANCGPAVGISHPAIAAVFAHFGHVKGVHPADDTGA 60

Query: 61  RVIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDSVSVSLSASELD 120
           RVIVCFSEESSARAALEALHGRPC LLGGRTLHIRYSI RPSISQ NDS+SVSLSASELD
Sbjct: 61  RVIVCFSEESSARAALEALHGRPCPLLGGRTLHIRYSITRPSISQPNDSLSVSLSASELD 120

Query: 121 IPGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELP 180
           IPGL+LLHDFV AKEEE+LL EVDARPWNNLAKRRVQHYGYEFCYQTRNVNT+HQLGELP
Sbjct: 121 IPGLFLLHDFVNAKEEEDLLREVDARPWNNLAKRRVQHYGYEFCYQTRNVNTKHQLGELP 180

Query: 181 SFVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGP 240
           SFVSHVVDRISMFPN ED+ADA LDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGP
Sbjct: 181 SFVSHVVDRISMFPNTEDIADASLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGP 240

Query: 241 CIMEFRRYTEGAWHKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYI 300
           CIMEFRRY EG WHK PS+IDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARY WHHYI
Sbjct: 241 CIMEFRRYPEGTWHKFPSSIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYVWHHYI 300

Query: 301 PHHKIDMVKDSAIRRGPRRVSFTFRKV 326
           PHHKIDMVKDS+IRRG RRVSFTFRKV
Sbjct: 301 PHHKIDMVKDSSIRRGRRRVSFTFRKV 327

[Close]

BLAST of Cp4.1LG06g05980 vs. ExPASy TrEMBL
Match: A0A1S3B9H0 (alkylated DNA repair protein alkB homolog 8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487636 PE=3 SV=1)

HSP 1 Score: 590 bits (1520), Expect = 9.46e-211
Identity = 291/326 (89.26%), Postives = 302/326 (92.64%), Query Frame = 0


Query: 1   MDLPRFARPRGDNGSSSSSPNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGTR 60
           M+LPRF RP   NGSSSS P LYVANCGPAVGISH  +AAVF  FG VKGVHAAD+TG R
Sbjct: 1   MELPRFTRPNQHNGSSSS-PILYVANCGPAVGISHPTIAAVFAHFGHVKGVHAADDTGAR 60

Query: 61  VIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDSVSVSLSASELDI 120
           VIVCFSEESSA+AALE LHGRPC LLGGRTLHIRYSIIRPSISQ NDSVSVSLSASELDI
Sbjct: 61  VIVCFSEESSAQAALETLHGRPCPLLGGRTLHIRYSIIRPSISQPNDSVSVSLSASELDI 120

Query: 121 PGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELPS 180
           PGL+LLHDFV AKEEE+LL EVDARPWNNLAKRRVQHYGYEFCYQTRNVNT+HQLGELP 
Sbjct: 121 PGLFLLHDFVNAKEEEDLLREVDARPWNNLAKRRVQHYGYEFCYQTRNVNTKHQLGELPP 180

Query: 181 FVSHVVDRISMFPNAEDVADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC 240
           FVSHVVDRIS+FPN EDVADA LDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC
Sbjct: 181 FVSHVVDRISLFPNTEDVADASLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPC 240

Query: 241 IMEFRRYTEGAWHKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYIP 300
           IMEFRRY EGAWH+ P +IDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYIP
Sbjct: 241 IMEFRRYPEGAWHEFPLSIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHYIP 300

Query: 301 HHKIDMVKDSAIRRGPRRVSFTFRKV 326
           HHKIDMVKDS+IRR PRRVSFTFRKV
Sbjct: 301 HHKIDMVKDSSIRRAPRRVSFTFRKV 325

[Close]

BLAST of Cp4.1LG06g05980 vs. TAIR 10
Match: AT1G31600.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 423.3 bits (1087), Expect = 2.0e-118
Identity = 217/329 (65.96%), Postives = 258/329 (78.42%), Query Frame = 0


Query: 4   PRFARPRGDNGSSSS----SPNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGT 63
           PRF RP   + SS S    S NLYVANCGPAVG++H A+AAVF +FG+V GV+AAD++G 
Sbjct: 89  PRFVRPTQSSPSSISGEPNSSNLYVANCGPAVGLTHNAIAAVFAEFGEVNGVYAADDSGV 148

Query: 64  RVIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIR-PSISQLNDSVSVSLSASEL 123
           RVIV F++  SA+AALEAL GRPC  L GR+LHIRYS+++ PS +Q+ND V VSL  SEL
Sbjct: 149 RVIVSFADPFSAKAALEALSGRPCPDLKGRSLHIRYSVLQLPSETQVNDCVPVSLIDSEL 208

Query: 124 DIPGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGEL 183
           +IPGL+LL DFVT  EE++LL+ VDAR W  LAKRRVQHYGYEFCY TRNV+T+ +LGEL
Sbjct: 209 NIPGLFLLPDFVTVAEEQQLLAAVDARHWIGLAKRRVQHYGYEFCYGTRNVDTKKRLGEL 268

Query: 184 PSFVSHVVDRISMFPNAED-VADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLA 243
           PSFVS +++RI +FPN ++  A   LDQLTVNEYP GVGLSPHIDTHSAFE  IFSLSLA
Sbjct: 269 PSFVSPILERIYLFPNFDNGSASLNLDQLTVNEYPSGVGLSPHIDTHSAFEDCIFSLSLA 328

Query: 244 GPCIMEFRRYTEGAWHKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHH 303
           GPCIMEFRRY+   W    ++ +        DS+ ++KA+YLPPRSMLLLSGEARYAW+H
Sbjct: 329 GPCIMEFRRYSVSTWKASTTDAE-----KSGDSSCIKKALYLPPRSMLLLSGEARYAWNH 388

Query: 304 YIPHHKIDMVKDSAIRRGPRRVSFTFRKV 327
           YIPHHKID VKD  IRR  RRVSFT RKV
Sbjct: 389 YIPHHKIDKVKDKVIRRSSRRVSFTLRKV 412

[Close]

BLAST of Cp4.1LG06g05980 vs. TAIR 10
Match: AT1G31600.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 423.3 bits (1087), Expect = 2.0e-118
Identity = 217/329 (65.96%), Postives = 258/329 (78.42%), Query Frame = 0


Query: 4   PRFARPRGDNGSSSS----SPNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGT 63
           PRF RP   + SS S    S NLYVANCGPAVG++H A+AAVF +FG+V GV+AAD++G 
Sbjct: 89  PRFVRPTQSSPSSISGEPNSSNLYVANCGPAVGLTHNAIAAVFAEFGEVNGVYAADDSGV 148

Query: 64  RVIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIR-PSISQLNDSVSVSLSASEL 123
           RVIV F++  SA+AALEAL GRPC  L GR+LHIRYS+++ PS +Q+ND V VSL  SEL
Sbjct: 149 RVIVSFADPFSAKAALEALSGRPCPDLKGRSLHIRYSVLQLPSETQVNDCVPVSLIDSEL 208

Query: 124 DIPGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGEL 183
           +IPGL+LL DFVT  EE++LL+ VDAR W  LAKRRVQHYGYEFCY TRNV+T+ +LGEL
Sbjct: 209 NIPGLFLLPDFVTVAEEQQLLAAVDARHWIGLAKRRVQHYGYEFCYGTRNVDTKKRLGEL 268

Query: 184 PSFVSHVVDRISMFPNAED-VADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLA 243
           PSFVS +++RI +FPN ++  A   LDQLTVNEYP GVGLSPHIDTHSAFE  IFSLSLA
Sbjct: 269 PSFVSPILERIYLFPNFDNGSASLNLDQLTVNEYPSGVGLSPHIDTHSAFEDCIFSLSLA 328

Query: 244 GPCIMEFRRYTEGAWHKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHH 303
           GPCIMEFRRY+   W    ++ +        DS+ ++KA+YLPPRSMLLLSGEARYAW+H
Sbjct: 329 GPCIMEFRRYSVSTWKASTTDAE-----KSGDSSCIKKALYLPPRSMLLLSGEARYAWNH 388

Query: 304 YIPHHKIDMVKDSAIRRGPRRVSFTFRKV 327
           YIPHHKID VKD  IRR  RRVSFT RKV
Sbjct: 389 YIPHHKIDKVKDKVIRRSSRRVSFTLRKV 412

[Close]

BLAST of Cp4.1LG06g05980 vs. TAIR 10
Match: AT1G31600.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 418.7 bits (1075), Expect = 4.8e-117
Identity = 215/328 (65.55%), Postives = 256/328 (78.05%), Query Frame = 0


Query: 4   PRFARPRGDNGSSSS----SPNLYVANCGPAVGISHRAVAAVFGDFGDVKGVHAADETGT 63
           PRF RP   + SS S    S NLYVANCGPAVG++H A+AAVF +FG+V GV+AAD++G 
Sbjct: 4   PRFVRPTQSSPSSISGEPNSSNLYVANCGPAVGLTHNAIAAVFAEFGEVNGVYAADDSGV 63

Query: 64  RVIVCFSEESSARAALEALHGRPCSLLGGRTLHIRYSIIRPSISQLNDSVSVSLSASELD 123
           RVIV F++  SA+AALEAL GRPC  L GR+LHIRYS+++   S++ND V VSL  SEL+
Sbjct: 64  RVIVSFADPFSAKAALEALSGRPCPDLKGRSLHIRYSVLQLP-SEVNDCVPVSLIDSELN 123

Query: 124 IPGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGELP 183
           IPGL+LL DFVT  EE++LL+ VDAR W  LAKRRVQHYGYEFCY TRNV+T+ +LGELP
Sbjct: 124 IPGLFLLPDFVTVAEEQQLLAAVDARHWIGLAKRRVQHYGYEFCYGTRNVDTKKRLGELP 183

Query: 184 SFVSHVVDRISMFPNAED-VADAVLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAG 243
           SFVS +++RI +FPN ++  A   LDQLTVNEYP GVGLSPHIDTHSAFE  IFSLSLAG
Sbjct: 184 SFVSPILERIYLFPNFDNGSASLNLDQLTVNEYPSGVGLSPHIDTHSAFEDCIFSLSLAG 243

Query: 244 PCIMEFRRYTEGAWHKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSGEARYAWHHY 303
           PCIMEFRRY+   W    ++ +        DS+ ++KA+YLPPRSMLLLSGEARYAW+HY
Sbjct: 244 PCIMEFRRYSVSTWKASTTDAE-----KSGDSSCIKKALYLPPRSMLLLSGEARYAWNHY 303

Query: 304 IPHHKIDMVKDSAIRRGPRRVSFTFRKV 327
           IPHHKID VKD  IRR  RRVSFT RKV
Sbjct: 304 IPHHKIDKVKDKVIRRSSRRVSFTLRKV 325

[Close]

BLAST of Cp4.1LG06g05980 vs. TAIR 10
Match: AT4G02485.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 3.8e-13
Identity = 58/219 (26.48%), Postives = 93/219 (42.47%), Query Frame = 0


Query: 119 DIPGLYLLHDFVTAKEEEELLSEVDARPWNNLAKRRVQHYGYEFCYQTRNVNTRHQLGEL 178
           +I GL+L  +F++   +  LLS +    W                +   ++N   + G+L
Sbjct: 43  EINGLWLYRNFLSIAHQSHLLSAILNEGW----------------FVEESINQAMRFGDL 102

Query: 179 PSFVSHVVDRISMFPNAEDV---------ADAVLDQLTVNEYPPGVGLSPHIDTHSAFEG 238
           PS+ + + D I     + D+          + + DQL VN Y PG G+  H+D    FE 
Sbjct: 103 PSWATELSDLIRETLESVDLPVLSADLLWREPLFDQLIVNLYQPGEGICAHVDL-LRFED 162

Query: 239 LIFSLSLAGPCIMEFRRYTEGAWHKCPSNIDLKMENSVNDSNYLRKAIYLPPRSMLLLSG 298
            I  +SL  PC+M F                    +    + Y    + L P S++L+SG
Sbjct: 163 GIAIVSLESPCVMRF--------------------SPAEKNEYEAVDVLLNPGSLILMSG 222

Query: 299 EARYAWHHYI--PHHKIDMVKDSAIRRGPRRVSFTFRKV 327
           EARY W H I    +   + +   I +  RR+S T RK+
Sbjct: 223 EARYRWKHEINRKQNGFQLWEGEEIDQ-KRRISITLRKL 223

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g05980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWY1	2.8e-117	65.96	Alkylated DNA repair protein ALKBH8 homolog OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q07G10	1.6e-27	30.09	Alkylated DNA repair protein alkB homolog 8 OS=Xenopus tropicalis OX=8364 GN=alk...	[more]
Q80Y20	4.2e-25	33.33	Alkylated DNA repair protein alkB homolog 8 OS=Mus musculus OX=10090 GN=Alkbh8 P...	[more]
Q95K79	2.3e-23	32.75	Alkylated DNA repair protein alkB homolog 8 OS=Macaca fascicularis OX=9541 GN=AL...	[more]
A1A4L5	3.0e-23	33.19	Alkylated DNA repair protein alkB homolog 8 OS=Bos taurus OX=9913 GN=ALKBH8 PE=2...	[more]

BLAST of Cp4.1LG06g05980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023536576.1	1.13e-239	100.00	alkylated DNA repair protein alkB homolog 8 [Cucurbita pepo subsp. pepo]	[more]
XP_022936765.1	1.09e-237	98.77	alkylated DNA repair protein alkB homolog 8 [Cucurbita moschata]	[more]
KAG6591851.1	3.63e-236	98.16	Alkylated DNA repair protein ALKBH8-like protein, partial [Cucurbita argyrosperm...	[more]
KAG7024716.1	5.16e-236	97.85	Alkylated DNA repair protein alkB-like 8 [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022976809.1	1.16e-232	96.93	alkylated DNA repair protein alkB homolog 8 isoform X1 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG06g05980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FEN4	5.26e-238	98.77	alkylated DNA repair protein alkB homolog 8 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IPP9	5.62e-233	96.93	alkylated DNA repair protein alkB homolog 8 isoform X1 OS=Cucurbita maxima OX=36...	[more]
A0A5D3BS48	5.48e-225	86.10	Alkylated DNA repair protein alkB-like protein 8 isoform X1 OS=Cucumis melo var....	[more]
A0A0A0L3H6	4.34e-212	89.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G669210 PE=3 SV=1	[more]
A0A1S3B9H0	9.46e-211	89.26	alkylated DNA repair protein alkB homolog 8 isoform X1 OS=Cucumis melo OX=3656 G...	[more]

BLAST of Cp4.1LG06g05980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31600.1	2.0e-118	65.96	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G31600.3	2.0e-118	65.96	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G31600.2	4.8e-117	65.55	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G02485.1	3.8e-13	26.48	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037151	Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily	GENE3D	2.60.120.590		coord: 114..331 e-value: 6.6E-48 score: 164.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 10..112 e-value: 7.2E-9 score: 37.6
IPR027450	Alpha-ketoglutarate-dependent dioxygenase AlkB-like	PFAM	PF13532	2OG-FeII_Oxy_2	coord: 152..324 e-value: 1.4E-16 score: 61.2
None	No IPR available	PANTHER	PTHR13069	UNCHARACTERIZED	coord: 17..330
None	No IPR available	PANTHER	PTHR13069:SF8	ALKYLATED DNA REPAIR PROTEIN ALKBH8 HOMOLOG	coord: 17..330
None	No IPR available	SUPERFAMILY	51197	Clavaminate synthase-like	coord: 120..326
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 20..98 score: 9.933804
IPR005123	Oxoglutarate/iron-dependent dioxygenase	PROSITE	PS51471	FE2OG_OXY	coord: 202..327 score: 9.056503
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 13..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g05980.1	Cp4.1LG06g05980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding