Cp4.1LG05g13330 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGGCCTGGCACGTGAGTGTTTAGGCCCATCTCAAAAAGAAAATAATCTGACATGAAAATAAAATTTAATAAACAGTGGCAGTGATCGGAGCCCTAGAAAGTGCCGGCGAAGGGGAATCATCCACCGGCACCGTCCCTGTCACTGGTACTCTCCTCCCGTCTGAGCGATCGTGTTTCAATCTTAATGAATTAACGATTTGAACTGTTCTTCTTTCTTCTCAATTGCCTCAAGTAGTTTCAGTTTCCTCTCCGATGTTTTTAGCTTATGATTTTGCGAATTTTACTTTCTTCTCGAATATGGAAAGTTTAGGTCTCTCAATTACTTGTACAAATAAACGAGATAGTTTTTTATATCTTTGTGTTATCGGTATATTCGAGAAAATTGAGGTTCGTCCATTTCTGTATAGCCGCGATTATATCTCTCGAAGGATCGCGATTCAATCTCATTCTACTTTTGAAGCTGAATTTAGAAAAATGAGTTAATGAGGCTGCGACATTTGAAGAATTTGAGTCTTGTTGGGAAGCTCTTCTGAATAAACATTACATTATGGACAATGAATGGCTTCAGTTAATGTATTGTGCTGGACAACAGTGGGGGTACCTGTTTATGTGAGAGACACTTTCTTTGGAGAGTAGGTTTGAATTTGTTTTTTTGATGGATATGTTACTGCATCCACCACGTTACAGATGTTGGTTAGACAGTATGAAAAGGGCCATGGAAAATTGGTATGGAAAAGAATTAAAAGCTGATTATGATCCAACTAACTCTATGCTAGTTTTGAAGACAACAGGCTGCAGATCCATATTCAAGGAGGATATTCAGAAAGTTCCAGGAGGAATTGGTAGAAACTCTTGCCAATCCTGCAACCAAAATTGATGATACAGGAACCGTGCCAAGTATCGAAATTTGGGGATGATCATAAAGCACATGCGGTTAGTTGAGTTGAAAGCTAATTGCAGCTATCAATTGTTTGAATATCTGGGAATAATTTGCAGACATATATTATCAGTTTTCCTTCTCAATATGTATTGAATCGGTGGACTAGAAATGACAGAAATGGAGATGCAATAGATGACCATAATTCTGAATTTCCTATTGAATCTAGAGATTCTTTGACTGTTAGGTACAATAATCTTCCTCAAGAAGCAATCAAGTGTAACAGTTCAACCTTACCGCTAGCAGATATTAACCGTTTAAGCCCGTTATATATCACCGTCCTCTGTTAGGGAGAGGTTTCCACACCCTTATAAGGAATGTTTCGTTATCCTCTCCAACCGTTGTGGGATCTCACATCAAATGTGTTGAGGAAGGAGTAAAGTCAATTCATATTCATAACGTGGCTATGGATATGGATGCCTTAAAAGAGGCCTCCAGAAAGGTTGCTGCTGTGAAGAATCGTGGCCCTAGAGCTTCGAATGGTGATATCATGGCCAATGGAGTTGTTGATCAATGGTTGCAACAGAAGAGGATCAGGCAGCAACCTATGGATCAGTGGTTAGTCTCTTTAATTTGCAGTCTTAAAATCACTGAAATATATCATTATTTATTGATGATCCTCCTCCTCTTCCCGTGAGTGGAGTCCAGAAATTGTGCATTGTGCTTGAAAGACATCTAAAGCATTAGGGTAAAACACTAAATTTTTGTAACGGCCAGTAGATATTGTCCTCTCTGGACTTTTCCTTTCGGGCTTCCCCCTCAAGGCTTTAAAACGCGTCTGCTAGGGAAAGGTTTCCACACTCTTATAAGGTGTTTCGTTCTCCTCCCCCACCAATGCGGGATATCACAATCCACCCCCTTCAGGGCCCAGCGTCCTTACTGGCACACTGCCTCGTGTCTACCCCCTTTCGGGGAAGAGCCTCCTCGCTGGCATATCACCCAGTGTCTGGCTCTGATACCATTTGTAACGGCCCAAGCCCACCGCTAGCAGATATTGTCATTTTTTTGGCTTTCCTTTTTGGGCTTCCCCTCAAGGCTTTAAAACGCGTCTACTAGGGAAAGATTTCCACACTCTTATAAAGGATGTTTCGTTCTCCTCCCCAACCAACCAATGTTGTTTTAGATTGAGTGGTAGGCTTTACTTTTGAATCAATTGAACACGGAGAGTTGGAAGATTCATTAGCTAATGTCAATAATAACGCTTAGGGGCTTGGGCCACATAGAACTTACTGAGTTTTTCTTGTCCTATACCTGTACTTTGGTTGGATGGCTTTCATTGTCTATACACTTTCAGATAGGTATGCCGGTTTTTAACTTAATTATTTCTGAACTTGACTGTTCTTTGATGCATCTGTTGTGCTGTATATGATGAATTGTCAAATAGATAATGCTCGTGCTTGATATCGAAGCGAGTCGATAGATTTGTCAAGGCTTCAGTTAATTAGATTCAGGTTGGTAGCGGTCATGTGGTCGACTTGTTGGGTGAATTAAATTCGATGAATTGTCCAAATACGAGCCAACTGTTCGTCTCTGCAGTTTTCATATCTACTTTTCTAGTGAGATTGAAAAGAGAAAAGGCTTGAAATAACCTATCATCAATTTTGTGGATGTAACATTTGAGAAGATAATGAAGTTTTCAGGACATAACGTGCTTTCTTATTTGTTCTCTGTTTCTGTTGGTTCTTTTCCCAGGAATAGAAGGAGAAGAAAATTCATGATCTTGGAAAAAATTGATCAACGTTGTGAAGTGTATAGAGCAAATCTCCTACCTGTTCTTAGAGACGTGGAAGAGCAGAAGTTGAATCTATCAGTGATGGTCCAAAATGGGAGGAGCACAAACCCACCGCTAACCGATATTATCCGTTTTGGCCCGTTACATATCGCCGTCAGCCTCACGATTTTTAAACACGTCTACTAGAGAGAGGTGGTTTTCACATCCTTACAAAGAATGTTTCGTTTCCCTCTCCAATAGATGTAGGATCACACAATCCATTACCTTGGAGGTCAATGTTGTCGTTGGAACACCACCTGGTGTTCGACTCTGATATTATTTGTAACAGCCCAAGCTTACTGCCAACAGATATTGTTCTCTTTGGAGTTTCCTTCAAAGTTCTAAAACACATCTGTTAGGTAGAGGTTTCCATACCCTTAAGCATTGTTTTATTTCTCCCTCCAACTGACTTAGAGCTCACTAATTATGATTGTCATCATCTCTTGAGTTGATACCATTCATCCACCGTGTTCATCTTATTTAATGGCTCGTCTTTCCAAAGAATAAGAATGACGAATCAACAGAACAAGTGACCGGTGGCATCGAAAGGAACGGTCAGGGTGTCTACTGTCATGTAAGTGCTCTAAATTCTAAATGTTGTTGTGTAGAAAAAAATGCTATACCTTAACCTATTCGAGTGTGACAAAGAGGTGGTTGGATCTAGGATGAAGCATCATGAACATCTGGCATTAAAGCCTGCCTTTGGACGCTATTGACATCCTGATGACTCGACAACTTCTTTGGGTGATTCTTGTGAAGTAAATACAATGTATTGTTAAAAGTTCTTCAATTTTGTAGGAATATCATTTAATATTAGTTAGGTCCAATGAAAAAAAGCTCTATTTTTCTCGATTGCATGGCTCTGGTACCATATGTAACCGCTTAAGCTCACCACTAGTAAATATTATCCGTTTCGGCCCATTATGTATCGTCGTTTTGGCCCGTTATGTATTGTCGTCAGTCTCACGGTTTTAA TGGGCCTGGCACGTGAGTGTTTAGGCCCATCTCAAAAAGAAAATAATCTGACATGAAAATAAAATTTAATAAACAGTGGCAGTGATCGGAGCCCTAGAAAGTGCCGGCGAAGGGGAATCATCCACCGGCACCGTCCCTGTCACTGCCGCGATTATATCTCTCGAAGGATCGCGATTCAATCTCATTCTACTTTTGAAGCTGAATTTAGAAAAATGAGTTAATGAGGCTGCGACATTTGAAGAATTTGAGTCTTGTTGGGAAGCTCTTCTGAATAAACATTACATTATGGACAATGAATGGCTTCAGTTAATGTATTGTGCTGGACAACAGTGGGGGTACCTGTTTATGTGAGAGACACTTTCTTTGGAGAGTAGGTTTGAATTTGTTTTTTTGATGGATATGTTACTGCATCCACCACGTTACAGATGTTGGTTAGACAGTATGAAAAGGGCCATGGAAAATTGGTATGGAAAAGAATTAAAAGCTGATTATGATCCAACTAACTCTATGCTAGTTTTGAAGACAACAGGCTGCAGATCCATATTCAAGGAGGATATTCAGAAAGTTCCAGGAGGAATTGGTAGAAACTCTTGCCAATCCTGCAACCAAAATTGATGATACAGGAACCGTGCCAAGTATCGAAATTTGGGGATGATCATAAAGCACATGCGGTTAGTTGAGTTGAAAGCTAATTGCAGCTATCAATTGTTTGAATATCTGGGAATAATTTGCAGACATATATTATCAGTTTTCCTTCTCAATATGTATTGAATCGGTGGACTAGAAATGACAGAAATGGAGATGCAATAGATGACCATAATTCTGAATTTCCTATTGAATCTAGAGATTCTTTGACTGTTAGGTACAATAATCTTCCTCAAGAAGCAATCAAGTGTAACAGTTCAACCTTACCGCTAGCAGATATTAACCGTTTAAGCCCGTTATATATCACCGTCCTCTGTTAGGGAGAGGTTTCCACACCCTTATAAGGAATGTTTCGTTATCCTCTCCAACCGTTGTGGGATCTCACATCAAATGTGTTGAGGAAGGAGTAAAGTCAATTCATATTCATAACGTGGCTATGGATATGGATGCCTTAAAAGAGGCCTCCAGAAAGGTTGCTGCTGTGAAGAATCGTGGCCCTAGAGCTTCGAATGGTGATATCATGGCCAATGGAGTTGTTGATCAATGGTTGCAACAGAAGAGGATCAGGCAGCAACCTATGGATCAGTGGGGCTTGGGCCACATAGAACTTACTGAGTTTTTCTTGTCCTATACCTGTACTTTGGTTGGATGGCTTTCATTGTCTATACACTTTCAGATAGGAATAGAAGGAGAAGAAAATTCATGATCTTGGAAAAAATTGATCAACGTTGTGAAGTGTATAGAGCAAATCTCCTACCTGTTCTTAGAGACGTGGAAGAGCAGAAGTTGAATCTATCAGTGATGGTCCAAAATGGGAGGAGCACAAACCCACCGCTAACCGATATTATCCGTTTTGGCCCGTTACATATCGCCGTCAGCCTCACGATTTTTAAACACGTCTACTAGAGAGAGGTGGTTTTCACATCCTTACAAAGAATGTTTCGTTTCCCTCTCCAATAGATGTAGGATCACACAATCCATTACCTTGGAGGTCAATGTTGTCGTTGGAACACCACCTGGTGTTCGACTCTGATATTATTTGTAACAGCCCAAGCTTACTGCCAACAGATATTGTTCTCTTTGGAGTTTCCTTCAAAGTTCTAAAACACATCTGTTAGGTAGAGGTTTCCATACCCTTAAGCATTGTTTTATTTCTCCCTCCAACTGACTTAGAGCTCACTAATTATGATTGTCATCATCTCTTGAGTTGATACCATTCATCCACCGTGTTCATCTTATTTAATGGCTCGTCTTTCCAAAGAATAAGAATGACGAATCAACAGAACAAGTGACCGGTGGCATCGAAAGGAACGGTCAGGGTGTCTACTGTCATGATGAAGCATCATGAACATCTGGCATTAAAGCCTGCCTTTGGACGCTATTGACATCCTGATGACTCGACAACTTCTTTGGGTGATTCTTGTGAAGTAAATACAATGTATTGTTAAAAGTTCTTCAATTTTGTAGGAATATCATTTAATATTAGTTAGGTCCAATGAAAAAAAGCTCTATTTTTCTCGATTGCATGGCTCTGGTACCATATGTAACCGCTTAAGCTCACCACTAGTAAATATTATCCGTTTCGGCCCATTATGTATCGTCGTTTTGGCCCGTTATGTATTGTCGTCAGTCTCACGGTTTTAA ATGGATATGGATGCCTTAAAAGAGGCCTCCAGAAAGGTTGCTGCTGTGAAGAATCGTGGCCCTAGAGCTTCGAATGGTGATATCATGGCCAATGGAGTTGTTGATCAATGGTTGCAACAGAAGAGGATCAGGCAGCAACCTATGGATCAGTGGGGCTTGGGCCACATAGAACTTACTGAGTTTTTCTTGTCCTATACCTGTACTTTGGTTGGATGGCTTTCATTGTCTATACACTTTCAGATAGGAATAGAAGGAGAAGAAAATTCATGA MDMDALKEASRKVAAVKNRGPRASNGDIMANGVVDQWLQQKRIRQQPMDQWGLGHIELTEFFLSYTCTLVGWLSLSIHFQIGIEGEENS Homology
BLAST of Cp4.1LG05g13330 vs. NCBI nr
Match: XP_023534289.1 (protein FAR1-RELATED SEQUENCE 9-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 107 bits (268), Expect = 7.35e-28 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g13330 vs. NCBI nr
Match: KAG6604982.1 (Protein FAR1-RELATED SEQUENCE 9, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 90.9 bits (224), Expect = 3.66e-20 Identity = 44/46 (95.65%), Postives = 45/46 (97.83%), Query Frame = 0
BLAST of Cp4.1LG05g13330 vs. NCBI nr
Match: XP_022971143.1 (protein FAR1-RELATED SEQUENCE 9-like [Cucurbita maxima]) HSP 1 Score: 85.9 bits (211), Expect = 1.02e-19 Identity = 41/46 (89.13%), Postives = 44/46 (95.65%), Query Frame = 0
BLAST of Cp4.1LG05g13330 vs. NCBI nr
Match: KAG7035016.1 (hypothetical protein SDJN02_01809, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 58.9 bits (141), Expect = 3.08e-09 Identity = 29/38 (76.32%), Postives = 30/38 (78.95%), Query Frame = 0
BLAST of Cp4.1LG05g13330 vs. NCBI nr
Match: KAG6570968.1 (Protein FAR1-RELATED SEQUENCE 9, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 61.2 bits (147), Expect = 1.73e-08 Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0
BLAST of Cp4.1LG05g13330 vs. ExPASy TrEMBL
Match: A0A6J1I5Z3 (protein FAR1-RELATED SEQUENCE 9-like OS=Cucurbita maxima OX=3661 GN=LOC111469904 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 4.95e-20 Identity = 41/46 (89.13%), Postives = 44/46 (95.65%), Query Frame = 0
BLAST of Cp4.1LG05g13330 vs. ExPASy TrEMBL
Match: A0A6J1J9D1 (Protein FAR1-RELATED SEQUENCE OS=Cucurbita maxima OX=3661 GN=LOC111483778 PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 8.36e-09 Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0
BLAST of Cp4.1LG05g13330 vs. ExPASy TrEMBL
Match: A0A6J1FUG3 (Protein FAR1-RELATED SEQUENCE OS=Cucurbita moschata OX=3662 GN=LOC111448901 PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 8.36e-09 Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0
BLAST of Cp4.1LG05g13330 vs. ExPASy TrEMBL
Match: A0A5D3BPC1 (Protein FAR1-RELATED SEQUENCE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00680 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.91e-08 Identity = 29/32 (90.62%), Postives = 31/32 (96.88%), Query Frame = 0
BLAST of Cp4.1LG05g13330 vs. ExPASy TrEMBL
Match: A0A1S3BIG2 (Protein FAR1-RELATED SEQUENCE OS=Cucumis melo OX=3656 GN=LOC103490440 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.91e-08 Identity = 29/32 (90.62%), Postives = 31/32 (96.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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