Cp4.1LG05g13060 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCTTTCGTCTGGAAAAAATTGTAAATGCTGTGCAAAATCTAGGACTTTCTTCTCTAGCAACAGACCAAGGATTGTCTGTAGTCCGCAAAGGCTATTGTGCAGTTTATGTAGGAGAGAGCCAAAGGCGGTTTGTGATTCCAATAGCATACTTGAATCAGCCATTTTTCAAGGACTTGCTCAGTGAAGCTGAAGAAGAATTTGGTTACAATCACCCTATGGGAGGTCTCACCATTCCCTGCAGTGATGATAAATTCATTGATCTCCTCTCTCATTTGAATTAG ATGGGCTTTCGTCTGGAAAAAATTGTAAATGCTGTGCAAAATCTAGGACTTTCTTCTCTAGCAACAGACCAAGGATTGTCTGTAGTCCGCAAAGGCTATTGTGCAGTTTATGTAGGAGAGAGCCAAAGGCGGTTTGTGATTCCAATAGCATACTTGAATCAGCCATTTTTCAAGGACTTGCTCAGTGAAGCTGAAGAAGAATTTGGTTACAATCACCCTATGGGAGGTCTCACCATTCCCTGCAGTGATGATAAATTCATTGATCTCCTCTCTCATTTGAATTAG ATGGGCTTTCGTCTGGAAAAAATTGTAAATGCTGTGCAAAATCTAGGACTTTCTTCTCTAGCAACAGACCAAGGATTGTCTGTAGTCCGCAAAGGCTATTGTGCAGTTTATGTAGGAGAGAGCCAAAGGCGGTTTGTGATTCCAATAGCATACTTGAATCAGCCATTTTTCAAGGACTTGCTCAGTGAAGCTGAAGAAGAATTTGGTTACAATCACCCTATGGGAGGTCTCACCATTCCCTGCAGTGATGATAAATTCATTGATCTCCTCTCTCATTTGAATTAG MGFRLEKIVNAVQNLGLSSLATDQGLSVVRKGYCAVYVGESQRRFVIPIAYLNQPFFKDLLSEAEEEFGYNHPMGGLTIPCSDDKFIDLLSHLN Homology
BLAST of Cp4.1LG05g13060 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 2.0e-24 Identity = 55/97 (56.70%), Postives = 70/97 (72.16%), Query Frame = 0
BLAST of Cp4.1LG05g13060 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 6.0e-24 Identity = 53/97 (54.64%), Postives = 70/97 (72.16%), Query Frame = 0
BLAST of Cp4.1LG05g13060 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.3e-23 Identity = 58/95 (61.05%), Postives = 67/95 (70.53%), Query Frame = 0
BLAST of Cp4.1LG05g13060 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.1e-22 Identity = 57/94 (60.64%), Postives = 65/94 (69.15%), Query Frame = 0
BLAST of Cp4.1LG05g13060 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 2.5e-22 Identity = 54/94 (57.45%), Postives = 69/94 (73.40%), Query Frame = 0
BLAST of Cp4.1LG05g13060 vs. NCBI nr
Match: KAG6605033.1 (hypothetical protein SDJN03_02350, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 193 bits (490), Expect = 5.18e-62 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g13060 vs. NCBI nr
Match: KGN61867.1 (hypothetical protein Csa_005975 [Cucumis sativus]) HSP 1 Score: 158 bits (400), Expect = 2.88e-48 Identity = 77/95 (81.05%), Postives = 86/95 (90.53%), Query Frame = 0
BLAST of Cp4.1LG05g13060 vs. NCBI nr
Match: KAA0045666.1 (auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYJ99617.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa]) HSP 1 Score: 158 bits (400), Expect = 2.88e-48 Identity = 78/95 (82.11%), Postives = 84/95 (88.42%), Query Frame = 0
BLAST of Cp4.1LG05g13060 vs. NCBI nr
Match: XP_038902470.1 (auxin-induced protein 15A-like [Benincasa hispida]) HSP 1 Score: 157 bits (396), Expect = 1.25e-47 Identity = 74/95 (77.89%), Postives = 84/95 (88.42%), Query Frame = 0
BLAST of Cp4.1LG05g13060 vs. NCBI nr
Match: XP_022146118.1 (auxin-responsive protein SAUR24-like [Momordica charantia]) HSP 1 Score: 153 bits (387), Expect = 2.94e-46 Identity = 74/95 (77.89%), Postives = 85/95 (89.47%), Query Frame = 0
BLAST of Cp4.1LG05g13060 vs. ExPASy TrEMBL
Match: A0A5A7TU59 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001910 PE=3 SV=1) HSP 1 Score: 158 bits (400), Expect = 1.39e-48 Identity = 78/95 (82.11%), Postives = 84/95 (88.42%), Query Frame = 0
BLAST of Cp4.1LG05g13060 vs. ExPASy TrEMBL
Match: A0A0A0LM55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258630 PE=3 SV=1) HSP 1 Score: 158 bits (400), Expect = 1.39e-48 Identity = 77/95 (81.05%), Postives = 86/95 (90.53%), Query Frame = 0
BLAST of Cp4.1LG05g13060 vs. ExPASy TrEMBL
Match: A0A5D3BN78 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001920 PE=3 SV=1) HSP 1 Score: 153 bits (387), Expect = 1.42e-46 Identity = 74/95 (77.89%), Postives = 82/95 (86.32%), Query Frame = 0
BLAST of Cp4.1LG05g13060 vs. ExPASy TrEMBL
Match: A0A6J1CXQ4 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111015414 PE=3 SV=1) HSP 1 Score: 153 bits (387), Expect = 1.42e-46 Identity = 74/95 (77.89%), Postives = 85/95 (89.47%), Query Frame = 0
BLAST of Cp4.1LG05g13060 vs. ExPASy TrEMBL
Match: A0A1S3C683 (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497507 PE=3 SV=1) HSP 1 Score: 153 bits (387), Expect = 1.42e-46 Identity = 74/95 (77.89%), Postives = 82/95 (86.32%), Query Frame = 0
BLAST of Cp4.1LG05g13060 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 102.8 bits (255), Expect = 1.5e-22 Identity = 49/79 (62.03%), Postives = 63/79 (79.75%), Query Frame = 0
BLAST of Cp4.1LG05g13060 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 98.6 bits (244), Expect = 2.8e-21 Identity = 47/96 (48.96%), Postives = 67/96 (69.79%), Query Frame = 0
BLAST of Cp4.1LG05g13060 vs. TAIR 10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 98.6 bits (244), Expect = 2.8e-21 Identity = 48/94 (51.06%), Postives = 66/94 (70.21%), Query Frame = 0
BLAST of Cp4.1LG05g13060 vs. TAIR 10
Match: AT4G34770.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 97.4 bits (241), Expect = 6.3e-21 Identity = 52/102 (50.98%), Postives = 69/102 (67.65%), Query Frame = 0
BLAST of Cp4.1LG05g13060 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 96.7 bits (239), Expect = 1.1e-20 Identity = 53/101 (52.48%), Postives = 67/101 (66.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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