Cp4.1LG05g03280 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG05g03280
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ubiquitin-conjugating enzyme E2 4-like
Location	Cp4.1LG05: 1949654 .. 1951857 (-)
RNA-Seq Expression	Cp4.1LG05g03280
Synteny	Cp4.1LG05g03280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATGTAAGAGAGAGAGAGCTTGAATCACTACTTCCGTGTCTGAACCGCTTTTGCGGGTAGGAAACCTCATTTCTCTTCCTATCACTATATCTCTTCTTTCTCTTACCCTTTTCCTCTCAAACCCAAATCCAAAACCAAAACCATGTCTTCTCCCAGCAAGCGACGCGAAATGGATTTGATGAAACTGTAAGTTCTTCCATGCCTTCCGATTTGATTCTTCTCTCCTTCTTCTTCCTCCTTTTTCCCCTTTGACTCTGCTGATGTTCACATCAGGATGATGAGTGATTACAAGGTGGAAACCATCAATGATAGCATGCAAGAGTTCTATGTCGACTTCCATGGTCCTAAAGACAGTAAATCATCTATACCCATCTTTGATTTCTCTATTTTCTTTGCTTTTTTACTAATTCCTCTTCTTCTACTGCGCCCTTCTGGATTTCCCCTTTTTCAGATGCTTAACAACTCTCTTTGAATCGACCTGTTTAGTTCTTAATTGCCTGCGTTTGTTGAATTTCCCTTCTCAAATGAATCCCAGTTGATATAGACTGTTCTGGGCAATATGATTTTGGGTTATATGGATTATCTTATCTTATCCCTTTCTCTTTGTTTGCTTGTTTGGTTTGAAATTGGAAGGTCTTTACCAAGGAGGTGTGTGGAGGATTAGGGTGGAGTTGCCAGATGCTTATCCTTACAAGTCACCTTCAATTGGCTTCATCAACAAAATTTATCATCCAAATGTTGATGAAATGTGAGTTGACATCACTCACACTCTGAAACTTATTACATTGGTTCTTCATAGGGGTAGGGTCTTATCTTGTTCTGGGGATGATTGTTGACTGATATAGATGTTTTACGAATCGCAGGTCGGGCTCGGTTTGTTTGGATGTTATCAACCAGACATGGAGCCCTATGTTTGGTGGGAAACCATCCCTACTCTTATCTTTGTAGAGTTATAATGTTATCTGTTTTGTTGTATATATTATATCATGGTGATCAATGGTGTTTTGTTTGTGGAATTACAATGCTGCGACCGAGGAATTGTGATCTAATTCGGGTGTTTTTCGTTGTATAGACCTTGTAAATGTTTTCGAAGTGTTTCTTCCACAACTTCTCCTGTATCCCAACCCGTCGGACCCGTTGAACGGCGAAGCTGCTGCAGTAATGATGCGTGATCGCGCTGCATATGAGCAAAGAGTAAAAGGTACTTCTATTGAAGATTTGGTAGTTTAAGCTAAGTTTAAGCTAAATACAAAACTAGATTTAGTAGCCGAACTTCACCAGTAGACAAATTCAGATTTTAGTGGCGGTCACCATTATGCCTGTGTGATCTAGATCACACCGATTGGGAAGGAGAACGAAACATTCTTTACAAGGATGCGGAAACCTCTCCTTAGCAAACTTGTTTTAAAAACCTCGAGGGAAAACTTGAAAGGAAAAGCTTAGAGAGGATATATCTACTAGCGGTGTGCTTGGGGTCAAACCCTTCTGTGTTCTGCATCCGTGATGATGATTGTGCATCTAATGGTTATAAACTTAGTAGGCATGTTATACTAGTCGTATCGGTTAACTTCCTCACCCCGACACACAAAGTTCAAACCTCTACAGGGTTCAAGACACGTACAAACCCCGTCCCGGCTGTTCTTTTCCTTGTTTTTCATTTGGGTTGTGTATGTATATGTACAGAATACTGTGAGAAATATGCAAAGCCAGAAGACATTGGAGGTGTTGGTGAGGAGAAATCCAGTGATGAAGAGGTGAGTGAAGATGAGTACTCCTCAGATGATGAGGAGATGGCAGGCCAAGCTGATGCTTGACTGGAAGGAAAACCATATCAACCCTCTTCTGTACATGATTCAAAAACTGGTTTACCATCAAAATTGAAAGCTATGGAGAAGGTTCCTAGCTCCTCTACTGTCTCTTATTTTCATGATAGTTGTTGTGTACATTAATCAAACTATGATATAATGTTTCATATATTGTCATTTACCATTTAATCTATAAACCAATTCTCTTGGGTTTTCTCCTTTTTCTCAACAGTTTCACGGTCTCTCCATCTCTAACGCAACGTTAGGGATGTAAGTGAGTCGGGTTGGTTCGGATATGGAGTAAAGCTCTGGTCGGAAGCTCCTGTATTCAATTTAAAAACTGAATTTTGTGCTACTGTACTTGGTTATTTCGAAAGCCCCGGTCGCGTTGTGTCGTC

mRNA sequence

AGATGTAAGAGAGAGAGAGCTTGAATCACTACTTCCGTGTCTGAACCGCTTTTGCGGGTAGGAAACCTCATTTCTCTTCCTATCACTATATCTCTTCTTTCTCTTACCCTTTTCCTCTCAAACCCAAATCCAAAACCAAAACCATGTCTTCTCCCAGCAAGCGACGCGAAATGGATTTGATGAAACTGATGATGAGTGATTACAAGGTGGAAACCATCAATGATAGCATGCAAGAGTTCTATGTCGACTTCCATGGTCCTAAAGACAGTCTTTACCAAGGAGGTGTGTGGAGGATTAGGGTGGAGTTGCCAGATGCTTATCCTTACAAGTCACCTTCAATTGGCTTCATCAACAAAATTTATCATCCAAATGTTGATGAAATGTCGGGCTCGGTTTGTTTGGATGTTATCAACCAGACATGGAGCCCTATGTTTGACCTTGTAAATGTTTTCGAAGTGTTTCTTCCACAACTTCTCCTGTATCCCAACCCGTCGGACCCGTTGAACGGCGAAGCTGCTGCAGTAATGATGCGTGATCGCGCTGCATATGAGCAAAGAGTAAAAGAATACTGTGAGAAATATGCAAAGCCAGAAGACATTGGAGGTGTTGGTGAGGAGAAATCCAGTGATGAAGAGGTGAGTGAAGATGAGTACTCCTCAGATGATGAGGAGATGGCAGGCCAAGCTGATGCTTGACTGGAAGGAAAACCATATCAACCCTCTTCTGTACATGATTCAAAAACTGGTTTACCATCAAAATTGAAAGCTATGGAGAAGGTTCCTAGCTCCTCTACTGTCTCTTATTTTCATGATAGTTGTTGTGTACATTAATCAAACTATGATATAATGTTTCATATATTGTCATTTACCATTTAATCTATAAACCAATTCTCTTGGGTTTTCTCCTTTTTCTCAACAGTTTCACGGTCTCTCCATCTCTAACGCAACGTTAGGGATGTAAGTGAGTCGGGTTGGTTCGGATATGGAGTAAAGCTCTGGTCGGAAGCTCCTGTATTCAATTTAAAAACTGAATTTTGTGCTACTGTACTTGGTTATTTCGAAAGCCCCGGTCGCGTTGTGTCGTC

Coding sequence (CDS)

ATGTCTTCTCCCAGCAAGCGACGCGAAATGGATTTGATGAAACTGATGATGAGTGATTACAAGGTGGAAACCATCAATGATAGCATGCAAGAGTTCTATGTCGACTTCCATGGTCCTAAAGACAGTCTTTACCAAGGAGGTGTGTGGAGGATTAGGGTGGAGTTGCCAGATGCTTATCCTTACAAGTCACCTTCAATTGGCTTCATCAACAAAATTTATCATCCAAATGTTGATGAAATGTCGGGCTCGGTTTGTTTGGATGTTATCAACCAGACATGGAGCCCTATGTTTGACCTTGTAAATGTTTTCGAAGTGTTTCTTCCACAACTTCTCCTGTATCCCAACCCGTCGGACCCGTTGAACGGCGAAGCTGCTGCAGTAATGATGCGTGATCGCGCTGCATATGAGCAAAGAGTAAAAGAATACTGTGAGAAATATGCAAAGCCAGAAGACATTGGAGGTGTTGGTGAGGAGAAATCCAGTGATGAAGAGGTGAGTGAAGATGAGTACTCCTCAGATGATGAGGAGATGGCAGGCCAAGCTGATGCTTGA

Protein sequence

MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQADA

Homology

[Close]

BLAST of Cp4.1LG05g03280 vs. ExPASy Swiss-Prot
Match: P42748 (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 SV=2)

HSP 1 Score: 312.4 bits (799), Expect = 3.4e-84
Identity = 153/176 (86.93%), Postives = 165/176 (93.75%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60
           MSSPSKRREMD+MKLMMSDYKVETIND MQEFYV+F+GPKDSLYQGGVW+IRVELPDAYP
Sbjct: 1   MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYP 60

Query: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPS+GFI KIYHPNVDE+SGSVCLDVINQTWSPMFDLVNVFE FLPQLLLYPNPSDPL
Sbjct: 61  YKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEE 177
           NGEAAA+MMRDR AYEQRVKEYCEKYAKP   G   E+KSSDEE+SE+EY SD+E+
Sbjct: 121 NGEAAALMMRDRPAYEQRVKEYCEKYAKP---GEGSEDKSSDEELSEEEYGSDNED 173

[Close]

BLAST of Cp4.1LG05g03280 vs. ExPASy Swiss-Prot
Match: P42749 (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 SV=2)

HSP 1 Score: 300.8 bits (769), Expect = 1.0e-80
Identity = 152/187 (81.28%), Postives = 164/187 (87.70%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVE IND MQEF+V+F GPKDS+Y+GGVW+IRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYP 60

Query: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPS+GFI KIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFE FLPQLLLYPNPSDPL
Sbjct: 61  YKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSS-----DDE 180
           NGEAAA+MMRDR  YEQRVKEYCEKYAKP       EE SSD+E+SEDEY+S     DD 
Sbjct: 121 NGEAAALMMRDRPTYEQRVKEYCEKYAKPR---ADTEEMSSDDEMSEDEYASDGDDEDDV 180

Query: 181 EMAGQAD 183
            +AG+ D
Sbjct: 181 AIAGKLD 184

[Close]

BLAST of Cp4.1LG05g03280 vs. ExPASy Swiss-Prot
Match: P16577 (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 1.8e-80
Identity = 147/183 (80.33%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKV+ IND M EF+V FHGPKDS+YQGGVW++RVEL +AYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVDMINDGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAYP 60

Query: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGF NKIYHPNVDEMSGSVCLDVINQTWSPMFDLVN+FEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDE-YSSDDEEMAG 180
           NGEAA++MMRD+ AYE +VKEYCE+YAKPEDI    EE+ SDEE+S+ E Y S DE + G
Sbjct: 121 NGEAASLMMRDKNAYENKVKEYCERYAKPEDISPEEEEEESDEELSDAEGYDSGDEAIMG 180

Query: 181 QAD 183
            AD
Sbjct: 181 HAD 183

[Close]

BLAST of Cp4.1LG05g03280 vs. ExPASy Swiss-Prot
Match: P42750 (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana OX=3702 GN=UBC6 PE=2 SV=2)

HSP 1 Score: 287.3 bits (734), Expect = 1.2e-76
Identity = 136/182 (74.73%), Postives = 158/182 (86.81%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60
           M+SPSKRREMD+MKLMMSDYKV+T+ND +Q FYV FHGP DSLYQGGVW+I+VELP+AYP
Sbjct: 1   MASPSKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYP 60

Query: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPS+GF+NKIYHPNVDE SG+VCLDVINQTWSPMFDL+NVFE FLPQLLLYPNPSDP 
Sbjct: 61  YKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPF 120

Query: 121 NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQ 180
           NGEAA+++MRDRAAYE +VKEYCEKYAKPE+I    ++  S  E   D    DD+E+ G+
Sbjct: 121 NGEAASLLMRDRAAYELKVKEYCEKYAKPEEILSDDDDDDSMSEDGSDSDDDDDDEIVGK 180

Query: 181 AD 183
           AD
Sbjct: 181 AD 182

[Close]

BLAST of Cp4.1LG05g03280 vs. ExPASy Swiss-Prot
Match: Q9P7R4 (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ubc8 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.0e-59
Identity = 109/183 (59.56%), Postives = 143/183 (78.14%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60
           MSSP +R E D+MKL+MSDY+V  +ND+MQEFYV FHGP ++ Y GG+W++ VELP  YP
Sbjct: 1   MSSPRRRIETDVMKLLMSDYEVTLVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYP 60

Query: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           +KSPSIGF+N+I+HPN+DE+SGSVCLDVINQTWSPMFD++N+FEVFLPQLL YPN SDPL
Sbjct: 61  WKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPL 120

Query: 121 NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQ 180
           NGEAAA+++R+   Y  +V++Y  +YA  ED      + S D+ +S  +  S D E+AG 
Sbjct: 121 NGEAAALLLREPNTYYAKVRDYIARYANKEDADITLNDSSDDDTMSSIDTESGD-EIAGP 180

Query: 181 ADA 184
            D+
Sbjct: 181 MDS 182

[Close]

BLAST of Cp4.1LG05g03280 vs. NCBI nr
Match: XP_022958690.1 (ubiquitin-conjugating enzyme E2 4-like [Cucurbita moschata] >XP_023534777.1 ubiquitin-conjugating enzyme E2 4-like [Cucurbita pepo subsp. pepo] >KAG6606082.1 Ubiquitin-conjugating enzyme E2 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 367 bits (941), Expect = 6.52e-128
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQ 180
           NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQ
Sbjct: 121 NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQ 180

Query: 181 ADA 183
           ADA
Sbjct: 181 ADA 183

[Close]

BLAST of Cp4.1LG05g03280 vs. NCBI nr
Match: XP_022996146.1 (ubiquitin-conjugating enzyme E2 4-like [Cucurbita maxima])

HSP 1 Score: 365 bits (937), Expect = 2.66e-127
Identity = 182/183 (99.45%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQ 180
           NGEAAAVMMRDR AYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQ
Sbjct: 121 NGEAAAVMMRDRTAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQ 180

Query: 181 ADA 183
           ADA
Sbjct: 181 ADA 183

[Close]

BLAST of Cp4.1LG05g03280 vs. NCBI nr
Match: KAG7036029.1 (Ubiquitin-conjugating enzyme E2 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 365 bits (937), Expect = 2.66e-127
Identity = 182/183 (99.45%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQ 180
           NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSS+DEEMAGQ
Sbjct: 121 NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSEDEEMAGQ 180

Query: 181 ADA 183
           ADA
Sbjct: 181 ADA 183

[Close]

BLAST of Cp4.1LG05g03280 vs. NCBI nr
Match: XP_004143895.1 (ubiquitin-conjugating enzyme E2 4 [Cucumis sativus] >XP_008437307.1 PREDICTED: ubiquitin-conjugating enzyme E2 4-like [Cucumis melo] >XP_038906796.1 ubiquitin-conjugating enzyme E2 4-like [Benincasa hispida] >KAA0042743.1 ubiquitin-conjugating enzyme E2 4-like isoform X1 [Cucumis melo var. makuwa] >KGN50082.1 hypothetical protein Csa_000238 [Cucumis sativus])

HSP 1 Score: 352 bits (903), Expect = 4.06e-122
Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGF+NKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQ 180
           NGEAAAVMMRDR AYEQRVKEYCEKYAKPEDIG V EEKSSDEE+SED+YSS DE MAGQ
Sbjct: 121 NGEAAAVMMRDRTAYEQRVKEYCEKYAKPEDIGAVPEEKSSDEELSEDDYSSGDEAMAGQ 180

Query: 181 ADA 183
           ADA
Sbjct: 181 ADA 183

[Close]

BLAST of Cp4.1LG05g03280 vs. NCBI nr
Match: XP_022159827.1 (ubiquitin-conjugating enzyme E2 4-like [Momordica charantia])

HSP 1 Score: 350 bits (898), Expect = 2.35e-121
Identity = 173/183 (94.54%), Postives = 178/183 (97.27%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVE INDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGF+NKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQ 180
           NGEAAAVMMRDR AYEQRVKEYCEKYAKPEDIG V EEKSSDEE+SED+Y+S DE+MAGQ
Sbjct: 121 NGEAAAVMMRDRTAYEQRVKEYCEKYAKPEDIGAVPEEKSSDEELSEDDYASSDEDMAGQ 180

Query: 181 ADA 183
           ADA
Sbjct: 181 ADA 183

[Close]

BLAST of Cp4.1LG05g03280 vs. ExPASy TrEMBL
Match: A0A6J1H475 (ubiquitin-conjugating enzyme E2 4-like OS=Cucurbita moschata OX=3662 GN=LOC111459841 PE=3 SV=1)

HSP 1 Score: 367 bits (941), Expect = 3.16e-128
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQ 180
           NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQ
Sbjct: 121 NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQ 180

Query: 181 ADA 183
           ADA
Sbjct: 181 ADA 183

[Close]

BLAST of Cp4.1LG05g03280 vs. ExPASy TrEMBL
Match: A0A6J1K3W2 (ubiquitin-conjugating enzyme E2 4-like OS=Cucurbita maxima OX=3661 GN=LOC111491458 PE=3 SV=1)

HSP 1 Score: 365 bits (937), Expect = 1.29e-127
Identity = 182/183 (99.45%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQ 180
           NGEAAAVMMRDR AYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQ
Sbjct: 121 NGEAAAVMMRDRTAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQ 180

Query: 181 ADA 183
           ADA
Sbjct: 181 ADA 183

[Close]

BLAST of Cp4.1LG05g03280 vs. ExPASy TrEMBL
Match: A0A5A7THI1 (Ubiquitin-conjugating enzyme E2 4-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002420 PE=3 SV=1)

HSP 1 Score: 352 bits (903), Expect = 1.97e-122
Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGF+NKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQ 180
           NGEAAAVMMRDR AYEQRVKEYCEKYAKPEDIG V EEKSSDEE+SED+YSS DE MAGQ
Sbjct: 121 NGEAAAVMMRDRTAYEQRVKEYCEKYAKPEDIGAVPEEKSSDEELSEDDYSSGDEAMAGQ 180

Query: 181 ADA 183
           ADA
Sbjct: 181 ADA 183

[Close]

BLAST of Cp4.1LG05g03280 vs. ExPASy TrEMBL
Match: A0A0A0KNV9 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152970 PE=3 SV=1)

HSP 1 Score: 352 bits (903), Expect = 1.97e-122
Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGF+NKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQ 180
           NGEAAAVMMRDR AYEQRVKEYCEKYAKPEDIG V EEKSSDEE+SED+YSS DE MAGQ
Sbjct: 121 NGEAAAVMMRDRTAYEQRVKEYCEKYAKPEDIGAVPEEKSSDEELSEDDYSSGDEAMAGQ 180

Query: 181 ADA 183
           ADA
Sbjct: 181 ADA 183

[Close]

BLAST of Cp4.1LG05g03280 vs. ExPASy TrEMBL
Match: A0A1S3AUA7 (ubiquitin-conjugating enzyme E2 4-like OS=Cucumis melo OX=3656 GN=LOC103482765 PE=3 SV=1)

HSP 1 Score: 352 bits (903), Expect = 1.97e-122
Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPSIGF+NKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQ 180
           NGEAAAVMMRDR AYEQRVKEYCEKYAKPEDIG V EEKSSDEE+SED+YSS DE MAGQ
Sbjct: 121 NGEAAAVMMRDRTAYEQRVKEYCEKYAKPEDIGAVPEEKSSDEELSEDDYSSGDEAMAGQ 180

Query: 181 ADA 183
           ADA
Sbjct: 181 ADA 183

[Close]

BLAST of Cp4.1LG05g03280 vs. TAIR 10
Match: AT5G41340.1 (ubiquitin conjugating enzyme 4 )

HSP 1 Score: 312.4 bits (799), Expect = 2.4e-85
Identity = 153/176 (86.93%), Postives = 165/176 (93.75%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60
           MSSPSKRREMD+MKLMMSDYKVETIND MQEFYV+F+GPKDSLYQGGVW+IRVELPDAYP
Sbjct: 1   MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYP 60

Query: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPS+GFI KIYHPNVDE+SGSVCLDVINQTWSPMFDLVNVFE FLPQLLLYPNPSDPL
Sbjct: 61  YKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEE 177
           NGEAAA+MMRDR AYEQRVKEYCEKYAKP   G   E+KSSDEE+SE+EY SD+E+
Sbjct: 121 NGEAAALMMRDRPAYEQRVKEYCEKYAKP---GEGSEDKSSDEELSEEEYGSDNED 173

[Close]

BLAST of Cp4.1LG05g03280 vs. TAIR 10
Match: AT1G63800.1 (ubiquitin-conjugating enzyme 5 )

HSP 1 Score: 300.8 bits (769), Expect = 7.3e-82
Identity = 152/187 (81.28%), Postives = 164/187 (87.70%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVE IND MQEF+V+F GPKDS+Y+GGVW+IRVELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYP 60

Query: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPS+GFI KIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFE FLPQLLLYPNPSDPL
Sbjct: 61  YKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120

Query: 121 NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSS-----DDE 180
           NGEAAA+MMRDR  YEQRVKEYCEKYAKP       EE SSD+E+SEDEY+S     DD 
Sbjct: 121 NGEAAALMMRDRPTYEQRVKEYCEKYAKPR---ADTEEMSSDDEMSEDEYASDGDDEDDV 180

Query: 181 EMAGQAD 183
            +AG+ D
Sbjct: 181 AIAGKLD 184

[Close]

BLAST of Cp4.1LG05g03280 vs. TAIR 10
Match: AT2G46030.1 (ubiquitin-conjugating enzyme 6 )

HSP 1 Score: 287.3 bits (734), Expect = 8.4e-78
Identity = 136/182 (74.73%), Postives = 158/182 (86.81%), Query Frame = 0


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60
           M+SPSKRREMD+MKLMMSDYKV+T+ND +Q FYV FHGP DSLYQGGVW+I+VELP+AYP
Sbjct: 1   MASPSKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYP 60

Query: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
           YKSPS+GF+NKIYHPNVDE SG+VCLDVINQTWSPMFDL+NVFE FLPQLLLYPNPSDP 
Sbjct: 61  YKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPF 120

Query: 121 NGEAAAVMMRDRAAYEQRVKEYCEKYAKPEDIGGVGEEKSSDEEVSEDEYSSDDEEMAGQ 180
           NGEAA+++MRDRAAYE +VKEYCEKYAKPE+I    ++  S  E   D    DD+E+ G+
Sbjct: 121 NGEAASLLMRDRAAYELKVKEYCEKYAKPEEILSDDDDDDSMSEDGSDSDDDDDDEIVGK 180

Query: 181 AD 183
           AD
Sbjct: 181 AD 182

[Close]

BLAST of Cp4.1LG05g03280 vs. TAIR 10
Match: AT1G64230.1 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 101.7 bits (252), Expect = 6.5e-22
Identity = 50/137 (36.50%), Postives = 74/137 (54.01%), Query Frame = 0


Query: 11  DLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYPYKSPSIGFIN 70
           DL K   +      + + M  +     GP DS Y GGV+ + +  P  YP+K P + F  
Sbjct: 12  DLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRT 71

Query: 71  KIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMR 130
           K++HPNV+  +GS+CLD++ + WSP   +  V  + +  LL  PNP DPL  E A +   
Sbjct: 72  KVFHPNVNS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPLVPEIAHMYKT 131

Query: 131 DRAAYEQRVKEYCEKYA 148
           DRA YE   + + +KYA
Sbjct: 132 DRAKYESTARSWTQKYA 146

[Close]

BLAST of Cp4.1LG05g03280 vs. TAIR 10
Match: AT1G64230.2 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 101.7 bits (252), Expect = 6.5e-22
Identity = 50/137 (36.50%), Postives = 74/137 (54.01%), Query Frame = 0


Query: 11  DLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYPYKSPSIGFIN 70
           DL K   +      + + M  +     GP DS Y GGV+ + +  P  YP+K P + F  
Sbjct: 12  DLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRT 71

Query: 71  KIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMR 130
           K++HPNV+  +GS+CLD++ + WSP   +  V  + +  LL  PNP DPL  E A +   
Sbjct: 72  KVFHPNVNS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPLVPEIAHMYKT 131

Query: 131 DRAAYEQRVKEYCEKYA 148
           DRA YE   + + +KYA
Sbjct: 132 DRAKYESTARSWTQKYA 146

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g03280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42748	3.4e-84	86.93	Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 S...	[more]
P42749	1.0e-80	81.28	Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 S...	[more]
P16577	1.8e-80	80.33	Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1...	[more]
P42750	1.2e-76	74.73	Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana OX=3702 GN=UBC6 PE=2 S...	[more]
Q9P7R4	1.0e-59	59.56	Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe (strain 972 / ATC...	[more]

BLAST of Cp4.1LG05g03280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958690.1	6.52e-128	100.00	ubiquitin-conjugating enzyme E2 4-like [Cucurbita moschata] >XP_023534777.1 ubiq...	[more]
XP_022996146.1	2.66e-127	99.45	ubiquitin-conjugating enzyme E2 4-like [Cucurbita maxima]	[more]
KAG7036029.1	2.66e-127	99.45	Ubiquitin-conjugating enzyme E2 5 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_004143895.1	4.06e-122	95.63	ubiquitin-conjugating enzyme E2 4 [Cucumis sativus] >XP_008437307.1 PREDICTED: u...	[more]
XP_022159827.1	2.35e-121	94.54	ubiquitin-conjugating enzyme E2 4-like [Momordica charantia]	[more]

BLAST of Cp4.1LG05g03280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H475	3.16e-128	100.00	ubiquitin-conjugating enzyme E2 4-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1K3W2	1.29e-127	99.45	ubiquitin-conjugating enzyme E2 4-like OS=Cucurbita maxima OX=3661 GN=LOC1114914...	[more]
A0A5A7THI1	1.97e-122	95.63	Ubiquitin-conjugating enzyme E2 4-like isoform X1 OS=Cucumis melo var. makuwa OX...	[more]
A0A0A0KNV9	1.97e-122	95.63	UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152970 PE...	[more]
A0A1S3AUA7	1.97e-122	95.63	ubiquitin-conjugating enzyme E2 4-like OS=Cucumis melo OX=3656 GN=LOC103482765 P...	[more]

BLAST of Cp4.1LG05g03280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41340.1	2.4e-85	86.93	ubiquitin conjugating enzyme 4	[more]
AT1G63800.1	7.3e-82	81.28	ubiquitin-conjugating enzyme 5	[more]
AT2G46030.1	8.4e-78	74.73	ubiquitin-conjugating enzyme 6	[more]
AT1G64230.1	6.5e-22	36.50	ubiquitin-conjugating enzyme 28	[more]
AT1G64230.2	6.5e-22	36.50	ubiquitin-conjugating enzyme 28	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 4..148 e-value: 7.2E-51 score: 185.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..183
None	No IPR available	PANTHER	PTHR24068:SF321	UBIQUITIN-CONJUGATING ENZYME E2-23 KDA	coord: 3..182
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 3..182
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 10..142 e-value: 7.4E-39 score: 132.6
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 1..148 score: 42.102623
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 7..143 e-value: 2.10588E-51 score: 159.675
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 1..156 e-value: 1.7E-50 score: 172.8
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 4..148
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 73..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG05g03280.1	Cp4.1LG05g03280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity