Cp4.1LG05g00310 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAGAATCTCATTCATTTTCGTCTTCATATTGGCCTTCCTCTCAGTTGCAGCCATGGCAGAGCCCAAAGAAAAAGATGGTGCAGTGACTAACTTCCATGACCAGCAGTTCATATGGGGAAGGAAGGAGAGAGTGAATCATGGAAGCTTTAGAAGCCCTAAGAAACACCTTCTCAATCCTCACCATTTTCAGCCATTTGATCCCTTTCAAGACCCTATTGATCTCTGA ATGGCTAGAATCTCATTCATTTTCGTCTTCATATTGGCCTTCCTCTCAGTTGCAGCCATGGCAGAGCCCAAAGAAAAAGATGGTGCAGTGACTAACTTCCATGACCAGCAGTTCATATGGGGAAGGAAGGAGAGAGTGAATCATGGAAGCTTTAGAAGCCCTAAGAAACACCTTCTCAATCCTCACCATTTTCAGCCATTTGATCCCTTTCAAGACCCTATTGATCTCTGA ATGGCTAGAATCTCATTCATTTTCGTCTTCATATTGGCCTTCCTCTCAGTTGCAGCCATGGCAGAGCCCAAAGAAAAAGATGGTGCAGTGACTAACTTCCATGACCAGCAGTTCATATGGGGAAGGAAGGAGAGAGTGAATCATGGAAGCTTTAGAAGCCCTAAGAAACACCTTCTCAATCCTCACCATTTTCAGCCATTTGATCCCTTTCAAGACCCTATTGATCTCTGA MARISFIFVFILAFLSVAAMAEPKEKDGAVTNFHDQQFIWGRKERVNHGSFRSPKKHLLNPHHFQPFDPFQDPIDL Homology
BLAST of Cp4.1LG05g00310 vs. NCBI nr
Match: KGN60344.1 (hypothetical protein Csa_002159 [Cucumis sativus]) HSP 1 Score: 85.9 bits (211), Expect = 5.82e-20 Identity = 46/79 (58.23%), Postives = 55/79 (69.62%), Query Frame = 0
BLAST of Cp4.1LG05g00310 vs. NCBI nr
Match: XP_007158215.1 (hypothetical protein PHAVU_002G133900g, partial [Phaseolus vulgaris] >ESW30209.1 hypothetical protein PHAVU_002G133900g, partial [Phaseolus vulgaris]) HSP 1 Score: 48.9 bits (115), Expect = 2.43e-05 Identity = 27/67 (40.30%), Postives = 35/67 (52.24%), Query Frame = 0
BLAST of Cp4.1LG05g00310 vs. NCBI nr
Match: PQM41608.1 (hypothetical protein Pyn_19607 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 48.5 bits (114), Expect = 4.19e-05 Identity = 25/47 (53.19%), Postives = 30/47 (63.83%), Query Frame = 0
BLAST of Cp4.1LG05g00310 vs. NCBI nr
Match: PQP94128.1 (hypothetical protein Pyn_34841 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 48.5 bits (114), Expect = 4.19e-05 Identity = 25/47 (53.19%), Postives = 30/47 (63.83%), Query Frame = 0
BLAST of Cp4.1LG05g00310 vs. NCBI nr
Match: KAF3959830.1 (hypothetical protein CMV_015393 [Castanea mollissima]) HSP 1 Score: 45.8 bits (107), Expect = 4.00e-04 Identity = 23/50 (46.00%), Postives = 29/50 (58.00%), Query Frame = 0
BLAST of Cp4.1LG05g00310 vs. ExPASy TrEMBL
Match: A0A0A0LH37 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895900 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 2.82e-20 Identity = 46/79 (58.23%), Postives = 55/79 (69.62%), Query Frame = 0
BLAST of Cp4.1LG05g00310 vs. ExPASy TrEMBL
Match: V7CJC2 (Uncharacterized protein (Fragment) OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G133900g PE=4 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 1.18e-05 Identity = 27/67 (40.30%), Postives = 35/67 (52.24%), Query Frame = 0
BLAST of Cp4.1LG05g00310 vs. ExPASy TrEMBL
Match: A0A314XPF7 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_34841 PE=4 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 2.03e-05 Identity = 25/47 (53.19%), Postives = 30/47 (63.83%), Query Frame = 0
BLAST of Cp4.1LG05g00310 vs. ExPASy TrEMBL
Match: A0A314UXH9 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_19607 PE=4 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 2.03e-05 Identity = 25/47 (53.19%), Postives = 30/47 (63.83%), Query Frame = 0
BLAST of Cp4.1LG05g00310 vs. ExPASy TrEMBL
Match: A0A1R3JFD0 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_16914 PE=4 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 7.59e-04 Identity = 26/59 (44.07%), Postives = 34/59 (57.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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