Cp4.1LG04g15630 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG04g15630
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionNon-specific serine/threonine protein kinase
LocationCp4.1LG04: 12221981 .. 12227279 (-)
RNA-Seq ExpressionCp4.1LG04g15630
SyntenyCp4.1LG04g15630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGTATCAAGGCTGGCAATCGATATGGAGTTGTTTGATGCATGGACTGCCCATGTTTAGTCATGTGTTTGTGGTGGTAAGTTCATGTTTTTTGTTGTGGCTTTTGAAGAGGAAACGATGTATTTAATAGCTACTCTGTAAAGGATATCATAGACAATTGGTTTTGTTTTTGTTTGTTTGTTTTATTTATGGAAAGTTTGTTATGCAATGAGGGTATCTGCTTTATGCTTCTAATTGATGCTTTTCCTTAGGAGTTTGTAACGTCCTCGCCGTCCATCAATTAAAAGTTTGTTTCTTGTTAAAAAAGCTTGTTTCTTTTATATACAAATGAACTCAATGATAGTGAAAAGCCGAAAGAGTTGCAACTCTCTAATTGGTCAGTATTGAAAACGGAGAGTAACTATAAAATATTTTCTATTTAAGACATCAAGATGAGGAAATAAGTGATAGAACCTCCCAAATCTGACGTAGGCCTTTCCTCCTAATATGTTTGCAAAGATTCGATTTTGAGCCAATCTTCTTGGAACAATGCACAAAAATTGTTTACTTGTAGTTGCTTTCAAATATCTTTTAAGGTTTGACAAAAAGAACGTTGCATCATAAAATGGATTATAAGGAGTCTAGGACATTGCACCTAAGCTAAAATGCCCCTTATGAGTCTCTAGACGGAACAATAAGAGGTCTCTCTTCTCAGAGACAACACTGTTGAGGATTGAGGTATTCTCTGGGGTTTCTTTTCTGAACTCAATCATTGTTAAGGTCACTCAAGTTTAGAGACCACTGAAGAGTTTTGCAACTTCAAGGAACCTTCAAGCTCCGTAACTTCTTGCAGAAAGCTGGAATAAGAATAAGTCTGCTTGAGCCTGCTGCACAGAATTTAATAAAAACCATAGCCCCTTCTAAGCACCAACTTCTTGAACCAGTCCCTAAGAGAGGTTTTGACGATCTACATAAGGTGCTACCATTTAGCCACCTCTCGATCATAAAGAAGGCTCTCTAAAACCAATAGTCCAGCTGCTACTTACATTAGGCTGTTCATGACCTTTTTAACTTAGAGAAGTTTATTGGAGAATAACATGAAGAGCCTTAAAAGATTTTGTATAAAGTGGGAATTATTATTTATTTATTTATTTTTGATAAGAGACAGATTCATTGATGATTGAAATTTATAAAAGGGATGTAATATCCATTATGATTACAAAAAACCTCCCCAATTTACAACGAGGGAGGTACAACTATAGGAAGTAAAAATATTAGACAGCTTACACCAAAATATAGCTTGGTAAACAATATTGTCGAAGAGTTTTGTATAAATCTGTGTCATATGGTCAGAAGAAAGTATAGGGTCTATCTCCGATTTTAATCTCAGAGAAGCCAGTTAAGATGTCCTTTACCTCAATAATACTAACACATTGCTCCTAGAACTACTGTAGCGACGTTTCTTAGGCAGCCCACCTGTGGTGAGTGTTTCATGTTTAAGCATCATAATTTCTTTTCATGTTTGAGCATCATAATTTCTTTCACAAAGAATCAGGATCAAAAGATGCCTCAACCACTTTGCAAGATGGGGCTCCTTCCTCTCTTCGGTCCTGTTCATGCAAGCCCTCCCTGAAGCAAGAAATTTTTTTAGTTTTCCTATGACATCTTCTTTCTGAATTGGCTTCTTCCAATAGAAAGTTTCTTATACGTATATCAATTTTAGACTCAACCATCTTTGGAACAGGGAAGATGGGGAGTTAATAAATTGGCAGGCAAGCAGGATCAAAGGGAGGCAGTCTCCTTTTGAGATAGGGTCAGATCTCTACTTTTGTAACATAGCATTTTCTGCACCATGAGGTTTCATTATAACATGGATTCAAGCAAACCCTCAAAGGGCCAGGTGGAATTTACTGGTAGACCATTGGAAAAGAGCTTATATTGAATCTTGATACCTTTGCAGCTCTAGAATGTTCCTTATTGTTGGTGTCAATGTCATTCATGACCCTCTGAGATTAAATAAACTTAGGACGTTACCTACTCCAAACTGCCATTGAAATATAAATTTACTAAATACTGGCTGACTAACCTACTGTACCAGTACTGAGTTCGTAATTATGATCTGAGTCAAAATTTTCCAATTGGGATCCGTTTTTGTAACTCCCAAGGTCTTGCCTCTTGGGGTTTTCTCATCTCCTTTGTGCATCTTCTCTTTGATTAATGAATATGTCTTGTTTCTTATATAAAATAACCTACTCTACCAAGTTACCTACTAAAGCATCTGACTTATATGTCCTGCTAAAACCAACTTCCTGCAATTATATGTTGCTGAGTGCTGACTATATAATGGATATTTATTTTTTTCTTACAAATGAGTAAGTGTTTGTTAGATCACCATAGTTATTTTGAAGTCATCTCAGGAGTGTGGACTTATCTCTTGTTACTTATAGACATACATTTTAATGCTATGCTATAATGAAGTTTATTGTATTTGAGAATCAATGCAGGCGGATGCTGCTCTGTTGCTTCTTGGAAAAATAATTGAACGAGTGAGTTCATATTTCCCAATGACTTTACTTTCTTGTTCTTTCTGTTGAGTAGTTAGAGTGAATCTTTCTACTGTATTGTTAACTTCCTAGAACTTTTTTTTGTTGGCTCAAGTCTCTCATGTAGTCCAATGAGAAGAAGTTTCATTTCTCTTAAAAAACAAGTCCCTCATGTAGTAGTTTCTTTGTTCAGGATTTATTGAAGACATGTGTGATTCCTCAAGATGTTTGGGAACATTTATTTTTCAAACGGATGCCATCGATGTAAGTTCTTATTTTCAACCTTTTTTTAGTTTGATTGAAACCTTTTTAATCCTCTATCATTTCCACTTTTTTTTTCCCTTTAAATTATCATTATTAAAAAAAGAAGTTAATTTCTTGTTTAAAAAAGCAAAGAAAAAACAAGAAACACAATCTTGTGATTGAAACAGGAAAACTGCTTAGAAAATATTGTTCTCCTTAGGGATAAGTTATCCAAATGGAGAAATTCTTGAGGGATTTTGCATTATCTAAAGGAGGGAGAGTTACCTGGATTCTTTTGGTGTTGGCAGCTATTACGTTATATTTCTTGTCCAGTGTCCAAATGCCAAGAAAATTGGCAATTAGAATAGAGAAATATATGGAATAAAGCTTTAGATGGAAAACATGACCTGAAACTAAATCATTTTTTGAGCTGGTGTATTATGTGCAAAAGATGTGTCGAGAACCATTCATTTATTTGTCCATTGCCCCTTTAGATACTTTAGAACTTTGTAGGCAGCTTTCCCGATTTGAGAATATGTGGCTGAACCATTCTGAAGTTTTGCCAATGGTAGAATATTGGTGGAAGAATACGCCCCTCCGTGGACGGCCGGGGCACGGTTTCATCAACAAACTTAAAAGACTAAAAGAAGTCTTAAAGAAATGGAACAAGGAGGTTTTTGGTTGTATTTCCACAAAAAGAAACCAACTACTAACTCAAATTGCTCTCCTTGATCAGATGGAGGAAACTAACTCCATCCCTCTAGTTCAACACACAGAAAAAGCTCATGAAAGCAGAACTTATTTCAAAAGAACTGTCCCTACATCACTATGAATTTGAGCTGCAATGTTTTGTAGTGAGAATGGGGGAGCATCAGTGGCATCTACATTTTCATCCTTTTGGAATGAATTCAAACTTTTGTTTGCATCATTGACCACATGGTTCCTTGATTTTATCTCGTCAAATTTCTAGAATGAAATGATTTCGAAGTCTAAGTGTTTATTTTCTTGAAAAGTTTGTACTACACGCATTTGACTGAAATGAGGGGAAAAATTTGGTGCCTGAGAGATGCGTTTTCATAATTCCAGTTAAGCTTTGCATGTTAACAATGTTATTCTAATTACATGGTAATGATGCCATCTAGAGGACTTGAGACTTGAGAGTTCGTGCTTGTCATATTTCATAGGATTTTGGGTAGAATATCACCTAATTTTATGTGGTATGGTTGTCTTGCAGATCTGCTTTGTACCTAATATCCTGTTACTTCTCGAGAAAAGGGTCTCAAGTAAGTTGCTTCAGCGGGAATGTCTGTCTCTGCGCATGTCATCTTGATCACTGTTTACCTTGCAATGCTCAGACTGCCAATTTGTCATTTGTCCAGTAGCTGTTATTGCTCTATCCTTGAGTTTGCAATATATTTCGGTTTCCTAGGGAGTATATATAATTTATAAGAAGTTAGATCTATCTACCAGATGGACAAATAAGTTATTACTTCTCTGTCTAAAAGTGGCCTCCTAAGCCTTGGGGCTAGGAATTGACAGAAGTCACCTTTGCAATCATTTTAACGACATATCATAATTCAGAAGTCAATCAAGATCATGGGGAGATCTCTTAGCACAATATGCTTAGACATAACCCTGAGCAATTACTAAGAAAAATCCTGATCTTTCACAGTTCGCTTAGCATAATTTCTCTTTTCTTGAAGTTCTTTTATTTCTATTTCATCTTAATATTAAGTTACCCATTTTGAGATATACCATGTTGCGCATTGGTGGGAGTTTGATATTACATGTGACTATGAGATTCAATTGAGGAATGAACTCCTGACTCATGCAATTTTCTTTTATGTATTATTTTCATTCAGGGTGACCTTCGAGACATTTTCCATCTTAGAAAAAATCTTCTGAGAGCAGTTCTAGGTCATCTTAACTTGAAGGTTTATTCCTCCTCCTCTCTGATTTTCTAATTCTTTTTTCTTTTCTTTTTTTTGTTTGTTGTTGAATCATTAAATATGTGGCGGCTAATCTTCTAATAGTTCAATCGTGAAAACTTAAAACTTCGTTTCAATTTAAAGAGTGCAGTATAAAGACTTTCCAATTTTGCTAGAGAATGAAAATGATATGAACATCAAATGGATTATCATCTGTACTATTTATGAAATGGTTAAAAGGTTTTTTTTGGAAACTGTGAGAACTCCGATTCAGGGAATTACAAAAAAACCTCCCCAAATGGATAGTAAAAGGAAAAGCTAGAGTGACGAAGGAGTGAACATTTGCACCTAGAAGAAAAAACAATAGTAAAGAAATGAGTGATTGATGATTCCATGCCCCAAAAAATCAGCTGAGAGAGTAGATCGTGTGGGCCATTTGGGAGGGCAGTCTCCATCTGAATGTTGCAAAAATCTGCTGCAAAATCACAAGATAGGAAGATGTGGCTTTGGGATTCAGAGTTGTGTTTACATACGTTGCACTAATGGGGAGATAATCCATATACGGTATCCTAATTTGAGGCTTGTTGCAAGTCTTAAAGGCCTGGTG

mRNA sequence

TTGTATCAAGGCTGGCAATCGATATGGAGTTGTTTGATGCATGGACTGCCCATGTTTAGTCATGTGTTTGTGGTGGCGGATGCTGCTCTGTTGCTTCTTGGAAAAATAATTGAACGAGATTTATTGAAGACATGTGTGATTCCTCAAGATGTTTGGGAACATTTATTTTTCAAACGGATGCCATCGATATCTGCTTTGTACCTAATATCCTGTTACTTCTCGAGAAAAGGGTCTCAAGTAAGTTGCTTCAGCGGGAATGTCTGTCTCTGCGCATGTCATCTTGATCACTGTTTACCTTGCAATGCTCAGACTGCCAATTTGTCATTTGTCCAGTAGCTGTTATTGCTCTATCCTTGAGTTTGCAATATATTTCGGTTTCCTAGGGAGTATATATAATTTATAAGAAGTTAGATCTATCTACCAGATGGACAAATAAGTTATTACTTCTCTGTCTAAAAGTGGCCTCCTAAGCCTTGGGGCTAGGAATTGACAGAAGTCACCTTTGCAATCATTTTAACGACATATCATAATTCAGAAGTCAATCAAGATCATGGGGAGATCTCTTAGCACAATATGCTTAGACATAACCCTGAGCAATTACTAAGAAAAATCCTGATCTTTCACAGTTCGCTTAGCATAATTTCTCTTTTCTTGAAGTTCTTTTATTTCTATTTCATCTTAATATTAAGTTACCCATTTTGAGATATACCATGTTGCGCATTGGTGGGAGTTTGATATTACATGTGACTATGAGATTCAATTGAGGAATGAACTCCTGACTCATGCAATTTTCTTTTATGTATTATTTTCATTCAGGGTGACCTTCGAGACATTTTCCATCTTAGAAAAAATCTTCTGAGAGCAGTTCTAGGTCATCTTAACTTGAAGGTTTATTCCTCCTCCTCTCTGATTTTCTAATTCTTTTTTCTTTTCTTTTTTTTGTTTGTTGTTGAATCATTAAATATGTGGCGGCTAATCTTCTAATAGTTCAATCGTGAAAACTTAAAACTTCGTTTCAATTTAAAGAGTGCAGTATAAAGACTTTCCAATTTTGCTAGAGAATGAAAATGATATGAACATCAAATGGATTATCATCTGTACTATTTATGAAATGGTTAAAAGGTTTTTTTTGGAAACTGTGAGAACTCCGATTCAGGGAATTACAAAAAAACCTCCCCAAATGGATAGTAAAAGGAAAAGCTAGAGTGACGAAGGAGTGAACATTTGCACCTAGAAGAAAAAACAATAGTAAAGAAATGAGTGATTGATGATTCCATGCCCCAAAAAATCAGCTGAGAGAGTAGATCGTGTGGGCCATTTGGGAGGGCAGTCTCCATCTGAATGTTGCAAAAATCTGCTGCAAAATCACAAGATAGGAAGATGTGGCTTTGGGATTCAGAGTTGTGTTTACATACGTTGCACTAATGGGGAGATAATCCATATACGGTATCCTAATTTGAGGCTTGTTGCAAGTCTTAAAGGCCTGGTG

Coding sequence (CDS)

TTGTATCAAGGCTGGCAATCGATATGGAGTTGTTTGATGCATGGACTGCCCATGTTTAGTCATGTGTTTGTGGTGGCGGATGCTGCTCTGTTGCTTCTTGGAAAAATAATTGAACGAGATTTATTGAAGACATGTGTGATTCCTCAAGATGTTTGGGAACATTTATTTTTCAAACGGATGCCATCGATATCTGCTTTGTACCTAATATCCTGTTACTTCTCGAGAAAAGGGTCTCAAGTAAGTTGCTTCAGCGGGAATGTCTGTCTCTGCGCATGTCATCTTGATCACTGTTTACCTTGCAATGCTCAGACTGCCAATTTGTCATTTGTCCAGTAG

Protein sequence

LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRMPSISALYLISCYFSRKGSQVSCFSGNVCLCACHLDHCLPCNAQTANLSFVQ
Homology
[Close]
BLAST of Cp4.1LG04g15630 vs. ExPASy Swiss-Prot
Match: Q9M3G7 (Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana OX=3702 GN=ATM PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.5e-18
Identity = 42/79 (53.16%), Postives = 56/79 (70.89%), Query Frame = 0 

Query: 1    LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM 60
            L +GWQSIWS L+HGL  FS + V+ DA L+LLG II  + +   ++PQ+VW+H  F+ +
Sbjct: 1282 LDRGWQSIWSSLIHGLATFSSMSVIVDAVLVLLGSIISSNHITVKILPQEVWDHQLFRHI 1341

Query: 61   PSISALYLISCYFSRKGSQ 80
            PS  ALY I+CYFSR G Q
Sbjct: 1342 PSEPALYFIACYFSRMGCQ 1360

[Close]
BLAST of Cp4.1LG04g15630 vs. NCBI nr
Match: XP_022928417.1 (serine/threonine-protein kinase ATM isoform X2 [Cucurbita moschata])

HSP 1 Score: 167 bits (422), Expect = 3.26e-45
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1   LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM 60
           LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM
Sbjct: 465 LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM 524

Query: 61  PSISALYLISCYFSRKGSQ 79
           PSISALYLISCYFSRKGSQ
Sbjct: 525 PSISALYLISCYFSRKGSQ 543

[Close]
BLAST of Cp4.1LG04g15630 vs. NCBI nr
Match: XP_022928409.1 (serine/threonine-protein kinase ATM isoform X1 [Cucurbita moschata])

HSP 1 Score: 167 bits (422), Expect = 3.26e-45
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1   LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM 60
           LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM
Sbjct: 465 LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM 524

Query: 61  PSISALYLISCYFSRKGSQ 79
           PSISALYLISCYFSRKGSQ
Sbjct: 525 PSISALYLISCYFSRKGSQ 543

[Close]
BLAST of Cp4.1LG04g15630 vs. NCBI nr
Match: XP_023531465.1 (serine/threonine-protein kinase ATM [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167 bits (422), Expect = 3.26e-45
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1   LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM 60
           LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM
Sbjct: 465 LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM 524

Query: 61  PSISALYLISCYFSRKGSQ 79
           PSISALYLISCYFSRKGSQ
Sbjct: 525 PSISALYLISCYFSRKGSQ 543

[Close]
BLAST of Cp4.1LG04g15630 vs. NCBI nr
Match: XP_023004533.1 (serine/threonine-protein kinase ATM isoform X3 [Cucurbita maxima])

HSP 1 Score: 166 bits (419), Expect = 8.26e-45
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1   LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM 60
           LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDL+KTCVIPQDVWEHLFFKRM
Sbjct: 103 LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLVKTCVIPQDVWEHLFFKRM 162

Query: 61  PSISALYLISCYFSRKGSQ 79
           PSISALYLISCYFSRKGSQ
Sbjct: 163 PSISALYLISCYFSRKGSQ 181

[Close]
BLAST of Cp4.1LG04g15630 vs. NCBI nr
Match: XP_023004525.1 (serine/threonine-protein kinase ATM isoform X2 [Cucurbita maxima])

HSP 1 Score: 166 bits (419), Expect = 8.27e-45
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1   LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM 60
           LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDL+KTCVIPQDVWEHLFFKRM
Sbjct: 465 LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLVKTCVIPQDVWEHLFFKRM 524

Query: 61  PSISALYLISCYFSRKGSQ 79
           PSISALYLISCYFSRKGSQ
Sbjct: 525 PSISALYLISCYFSRKGSQ 543

[Close]
BLAST of Cp4.1LG04g15630 vs. ExPASy TrEMBL
Match: A0A6J1EJV2 (Non-specific serine/threonine protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111435229 PE=4 SV=1)

HSP 1 Score: 167 bits (422), Expect = 1.58e-45
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1   LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM 60
           LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM
Sbjct: 465 LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM 524

Query: 61  PSISALYLISCYFSRKGSQ 79
           PSISALYLISCYFSRKGSQ
Sbjct: 525 PSISALYLISCYFSRKGSQ 543

[Close]
BLAST of Cp4.1LG04g15630 vs. ExPASy TrEMBL
Match: A0A6J1EKR8 (Non-specific serine/threonine protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111435229 PE=4 SV=1)

HSP 1 Score: 167 bits (422), Expect = 1.58e-45
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1   LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM 60
           LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM
Sbjct: 465 LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM 524

Query: 61  PSISALYLISCYFSRKGSQ 79
           PSISALYLISCYFSRKGSQ
Sbjct: 525 PSISALYLISCYFSRKGSQ 543

[Close]
BLAST of Cp4.1LG04g15630 vs. ExPASy TrEMBL
Match: A0A6J1KZU1 (Non-specific serine/threonine protein kinase OS=Cucurbita maxima OX=3661 GN=LOC111497793 PE=4 SV=1)

HSP 1 Score: 166 bits (419), Expect = 4.00e-45
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1   LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM 60
           LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDL+KTCVIPQDVWEHLFFKRM
Sbjct: 103 LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLVKTCVIPQDVWEHLFFKRM 162

Query: 61  PSISALYLISCYFSRKGSQ 79
           PSISALYLISCYFSRKGSQ
Sbjct: 163 PSISALYLISCYFSRKGSQ 181

[Close]
BLAST of Cp4.1LG04g15630 vs. ExPASy TrEMBL
Match: A0A6J1KUU2 (Non-specific serine/threonine protein kinase OS=Cucurbita maxima OX=3661 GN=LOC111497793 PE=4 SV=1)

HSP 1 Score: 166 bits (419), Expect = 4.01e-45
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1   LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM 60
           LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDL+KTCVIPQDVWEHLFFKRM
Sbjct: 465 LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLVKTCVIPQDVWEHLFFKRM 524

Query: 61  PSISALYLISCYFSRKGSQ 79
           PSISALYLISCYFSRKGSQ
Sbjct: 525 PSISALYLISCYFSRKGSQ 543

[Close]
BLAST of Cp4.1LG04g15630 vs. ExPASy TrEMBL
Match: A0A6J1KZS2 (Non-specific serine/threonine protein kinase OS=Cucurbita maxima OX=3661 GN=LOC111497793 PE=4 SV=1)

HSP 1 Score: 166 bits (419), Expect = 4.01e-45
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1   LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM 60
           LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDL+KTCVIPQDVWEHLFFKRM
Sbjct: 465 LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLVKTCVIPQDVWEHLFFKRM 524

Query: 61  PSISALYLISCYFSRKGSQ 79
           PSISALYLISCYFSRKGSQ
Sbjct: 525 PSISALYLISCYFSRKGSQ 543

[Close]
BLAST of Cp4.1LG04g15630 vs. TAIR 10
Match: AT3G48190.1 (ataxia-telangiectasia mutated )

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-19
Identity = 42/79 (53.16%), Postives = 56/79 (70.89%), Query Frame = 0 

Query: 1    LYQGWQSIWSCLMHGLPMFSHVFVVADAALLLLGKIIERDLLKTCVIPQDVWEHLFFKRM 60
            L +GWQSIWS L+HGL  FS + V+ DA L+LLG II  + +   ++PQ+VW+H  F+ +
Sbjct: 1282 LDRGWQSIWSSLIHGLATFSSMSVIVDAVLVLLGSIISSNHITVKILPQEVWDHQLFRHI 1341

Query: 61   PSISALYLISCYFSRKGSQ 80
            PS  ALY I+CYFSR G Q
Sbjct: 1342 PSEPALYFIACYFSRMGCQ 1360

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g15630 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M3G71.5e-1853.16Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana OX=3702 GN=ATM PE=1 ... [more]
BLAST of Cp4.1LG04g15630 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022928417.13.26e-45100.00serine/threonine-protein kinase ATM isoform X2 [Cucurbita moschata][more]
XP_022928409.13.26e-45100.00serine/threonine-protein kinase ATM isoform X1 [Cucurbita moschata][more]
XP_023531465.13.26e-45100.00serine/threonine-protein kinase ATM [Cucurbita pepo subsp. pepo][more]
XP_023004533.18.26e-4598.73serine/threonine-protein kinase ATM isoform X3 [Cucurbita maxima][more]
XP_023004525.18.27e-4598.73serine/threonine-protein kinase ATM isoform X2 [Cucurbita maxima][more]
BLAST of Cp4.1LG04g15630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EJV21.58e-45100.00Non-specific serine/threonine protein kinase OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A6J1EKR81.58e-45100.00Non-specific serine/threonine protein kinase OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A6J1KZU14.00e-4598.73Non-specific serine/threonine protein kinase OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
A0A6J1KUU24.01e-4598.73Non-specific serine/threonine protein kinase OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
A0A6J1KZS24.01e-4598.73Non-specific serine/threonine protein kinase OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
BLAST of Cp4.1LG04g15630 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G48190.11.1e-1953.16ataxia-telangiectasia mutated [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038980Serine/threonine-protein kinase ATM, plantPANTHERPTHR37079SERINE/THREONINE-PROTEIN KINASE ATMcoord: 2..80
NoneNo IPR availablePANTHERPTHR37079:SF4SERINE/THREONINE-PROTEIN KINASE ATMcoord: 2..80

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g15630.1Cp4.1LG04g15630.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006974 cellular response to DNA damage stimulus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0106310 protein serine kinase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0004712 protein serine/threonine/tyrosine kinase activity