Cp4.1LG04g12500 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g12500
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	E3 ubiquitin-protein ligase RHF2A-like isoform X2
Location	Cp4.1LG04: 8061708 .. 8068409 (-)
RNA-Seq Expression	Cp4.1LG04g12500
Synteny	Cp4.1LG04g12500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAATAAGGATAGACGTGGGGCATTGGTACGGAAGCGAGTGGCGCGAGTAGTAAAACTCTGCCACGAGTTAAAGCCCATCATAGCTCATACGCACTGACCCGACGACCGACCCAAGCGCAGCACTCAGTAGCAGCCTTTTATCAAGTCAAGGCCGGAGCCAATTCTCCTCCTCCTCCTCCTCCTCCTCCGCCTGCTCCTCCTCCTAGGGTTCCACTGGTTCCAATCCAATCTTATTTACCCGTTCTCTCACAAGCTTCTCCTGCTGATCGTCGTTTCTCATGGAGGTAACTTTCTTCCCCTAAATCTCTTCTCTCTTCCTTCTTTTTGCGTTTCATGTCTCTATCTATCTTTAATTCTCTCTTTGATGAATATTATTGTGCCTACTTTTCTTCCTTTTTTCCGGATTCCGTTTTTCTTGGCTGTTGTTCACCGGATGGATTTATTCTGTTACTGGATTCTTTTACTTTTTTTTAATCTTGTTTTCATTGAGTATCGGAACTGGAGAGGAATGGCTTTGTTATCCTTTTCAAATGTACTTTCCTCTTGAATTTTCATTCTGGCTTTCTCTATATGTAGTTTTTGCGATCTTTTATTACTGTTCTCTTCGAACTAGCTGCTTGTTGCTTTTCGCTCTGGAAATTGTGGTTTTGAATTCTTTGATTCTTTATGGATGTTTGGGTAGGCTGTTTGTGCGTGGTTTAATTCACTTCAAATTTGTGTCGTGTCGCTAATTTATAATTGTTAGCACTTGTTTATCATTTCCTTGTTTAGTTGCTGCTTATATATCACGCAATAGATCATGTGTTTCTTGTATATTTTTAAGTTTTTCTTGGTGGTGATGATTTTTTTTTTTTTAAATTCGTGTAGTCTCCAACGATGGACGAAACTAAGAATTCTGAAGCGCATTTGACATCAGCTGCAGCTTTTGTCGAAGGTGGAATCCAGGATGCTTGTGATGACGCTTGCAGTATATGTCTTGAAAACTTCTGTGACAATGATCCTTCAACGGTAGTACTTATAGTGTGATTTGATTTTTAACTGGAAGTCAGATGGTCTGTTCTACTTAGTCAGTTGCTATATTTTGTTCAGATGACCAGTTGCAAACATGAGTTTCATCTGCAGTGCGTTCTTGAATGGTAATTTCTTTTTTTTTTTTTTTTTCAATATCTGTTTGAGATATCAGATCTGCTCGTGATCATCTTGTTTTACTATTGATTTGATTACGAAGACAGTGGATGTTTGGAAGACTACCAGATACCTGCCTCTAACTGTGGCTTCTTTTTGTATTTATACAGTTTCGTCAATTAAGTTCATTTGATGCACCAATTTGTAACAACCAGGGGTTCTTGGGCATTTCCCTTCTTTTATAATTTTCACCAGCCAATGAAAAGTATCTTATTTCCTTTTTCCTCCAAAAAGAAAGAAAAAATTATAGGGAAGTTCTAATACTTTGAAAGGGTTAGTAGATCATCATATAAGTAGAATCTTACGTATTTGAATTGTGAGACGGTTGATTTCTCAGTGCTAGAAATGAATCCAAATTTGAAAGACCATGCTAGGTACCTCGGGGGTGTAAGACTTAATAAAGTATCTGGGTCTGTTGCTATGACAGTTCTTCTATTGACTAGTGTCCAGACTACCAATCTATGATGTACTGGTGGGGATGGAAGTGTGTATGAGCTGTAAGCTGGTAAGCAATATGACTTACTACCTTCATTGTTAGTATCACATGTATTTAACATCTAGGTGATAGCTTATAGTGGTAAAGATGGTGGGAATTGGATGTTCTTCGTATTTCGAGGTATGATGTGCCTGAGTTTTCTAATATCATCTCCAGAATGTTGAGACGAGAGAAAAAGGTCAGCAGACCTCTTGCCATGTGGACATTTTCCTTGGATGGTTGAAGAAAATGGTGAGGATGAAAGCTAACTTCAAGAGTTGGATTTTGTTTTGAAGATTCTTGGATTTAACCAAGTGATCGTGGTTTTAACCCATGCCCAGCATTGCCTGCTTGGAATATTAAAAATTTGACACAGTAAACACTGGGTGGCTAGAGGATTTTGGGTAGAAATGATGTATTCATGTGAGGATTAAACTATACATGAATACTTATTTTTATTGCTTTTTCATTCTCTTAATAGTATTATACGTTGATAAAAAACTAAAAAAATAAAAAAATAAAAGAAAAGAAAAGAATTTTATAAAATATAATTGCAAATTGCAAAAAATATGATTTTCAAAAGCAACCAACAGATATGGACTTCAAGGCAAGACAGCCTTCCTGATGATCATTCCTGTAAAATCCCAACCTCTGATTCTTTGAAGCTTATCTTGACATTCCATCTTATCTTCTGAAACCAACACTTCTTTTGATGTGATCATATTTGGAAATTAAGTGCAAAATATCTTAGCAGACCTGTATAGCAAATATTTATATGCCTTTCAATGTCAAGTTGTGAGTTTTTCAAATATTTTTTGCAGATGCCTAAATTTTTTTATTTGAATGCTCGTCTATTTCTTTGATGTGCGTTTGCACTTATTCTGCATAGGAGTTTGTTGCGTATCACTTTTTACAAGCAATTGATCTCTAATGTATGTGATTTCAACATATTGAATCTCAAAGGAGAGATTATCTTCTGACAAAGAAAAGAAAGAGAGTTTTTGTGGGTAGTATCCATTGCAAGATCGTTTCCTGGACTTGAATATGAGCCGTAGTTGTTTGCTACCCTATTCTGTAAGCTCTATCATTGGAAAAGGCTAAGGATCACTGGATTCTCATAACCATTTTTTGACGTTTCTTTTTGGAAAAAAATTCTCTGATTTCAACCATGGGTACTCAATCTTATGGAACTGTTCGCAACCTCAAGTCTTCTAACAAGGAAGACCTACTTTGGTGTCCTTGGCCTAAAATAGAGAAGACCTACTTTGGAAGTGTGATAATATGTGTCTTTTATAACCAAATATCTATTAACTGATTTACGGGAGGCTTCTATTTTGGGTGGTACTTTATGCTTCTTCCTCTGACGGTTTTTCTTTAAAAAAGTTGGTGCTTTCTTTGGCAGTTTTCTCATGAAGGAATTATTACTTAGTACAAGATCCAGAAGAGGCACCCCTGTATTGTTCTTTTTTTAAATCTGGTCTTGGTCATATATTGAAGTGAAACAAAATAGATTGGTTTGGGCTTTGATTGAGTGAACCAATCATCATTAAACAAAAAATCATTTAAACATAGTTCCATTCAGAATACCGTGCTGTCTAATTACTTAGATTATTAACTAACAATAAGTTGGCTTGGATAGTCCATTATCTGCTTCTTAGGCTGCTTCTGTTGTGATTCTGATCCTATGAATCATATATTTTGTTACTTTTAGATTGAGGGGTTTGTGTTGTTTATAATATGTTTATATATTTCTTTCATTTTTTGCCATGATGCTTTATGGTGGTAGGGCTCAGTTGGGAGTGGTTTTCTTTCAGTTCTACTGTATGATAGTTTTTTTAGGGAAGGTTCAAATTTCAAATTTCTTAGACTAGAGTTCAGGCGGTTATTGTTTTAAGTAGAAATGTAAAACATATTATTATTAGTTTTAAGAAGGTTGGAAATTATATAAAGCTTCACAGTGAATAAAAAATGGGAAGAACATTTTGAATTGAAAAGCCATAGACCAGAAACGTGATATTAATCTGCAAAGAAATTGAAATCCCGTCTTCATCAAGCAAATTATTCTGAAATTTCTCAAGTACCTCTCTTTAGCCAGTTACTCCACAACATGATCAATACTCCCAGCTCTGCCGAAGTTGTGCATTATTTTCTGCATTAAAATGAAGTTTGAGGTTATGACTGGAATTTAAATTTGATTGGTTCAAGCATGTTTATTTTGTCCCATCTTTTAATAGGTGTCAGAGAAGCTCCCAATGCCCCATGTGTTGGCAACCTGTTAGTCTGAAGGATCCAACCAGGTTTATACTGATTCCATTTTTGTATCATCACTTTTTCATTTAAATTTGAAAGCAGATGAAGGTTGTTTATGTGAGGTTGTTCTGCAGTCAGGAGTTGCTCGAAGCAGTAGAACAAGAGAGAAGTTTTAGACTTAATCCAGTTAGAAACTCAACAATATTTCGACATCCCACTTTTGGTGACTTTGAGTTACAGCATGTATGTATCCAATATGATACTTACCCTAAAGTCATTAAATCATGGACACCAAAATCTAAGTTGGGGAACATTTTTTCTCAATGCAGCTGCCAGCTGGTGCTGATGAGGCTGACCTTGAAGAGCGTATACTCCAACACCTAGCTGCTGCAGCTGCCATGGGACAAGCTCGCCATAGTGCCAGAAGGGAAGGCCACAGACATCGGTCAGGAATTCATGGCCGTCCCCAATTGTTGGTGTTTTCTTCCCCTCCTAATTCTTCATCGACCTCTCAACTTCCTCGTGACAATCGGGAAGGTGAAGCAGCCTCAAGAATCATGGTAGCTACTGTATCACCACCTCAACCTGCTGGAGAAGAGTCTCCACAACTCAATGCTCCAGCATCTCCCGTGCAAACTGATCAGTCTTCTCCATCAGCACCTCAATACAGTCCACGTTCTGCCAGCCAACTTGGATCTCCTTCGAGCGATAGGTATTCATTATTCATTGGATTTATAGAGGTGGTGCTAATTTAATTGAAATGTGTCTTCGCATGCAGCTACATGGAATTTATCGATCATGTATTAATATTATTGTCCCACACCGTTCTTAGGAGATCCACCAGTCAACCAGTGCGAAGTAGTCAAGATAGAGCCGGACCATCATCAGAATTGCAATCACTCTCGGATTCACTGAAGTCTCGATTTAATGCAATGTCAATGAGGTTTGTAATATATGTCTTAATGGCTTTTATTTTTCCTAGTGTAATTTCTGATTACTTTGTTCTTTCATGACTTTAGCACCTCCATTATTCTTTTCTTTTCAGATACAAAGATTCAATCGCAAAGAGCACAAGAGGCTGGAAGGAGAAATTGTTCTCTCGCAATACTTCAATGTCAGATATTGGCTCTGAGGTTAGAAGAGAGGTTAATGTTGGGATAGCAACGGTATCGCGCATGATGGAACGTCTTGAAACAAGAGATGCTAGAAAAAGTAGCAGTCCTGAGTCCAGTAATGTAGGGGATAACAACCCGGTTTCGGAATCAAATGATAGACGGACACCAAAGAATGGAGGAAACAATCCTTTGAGCGTCTCAAATAAAAAAGGTTCATGCCCTGCAGAATCCAGTTCAAGTTGAACATTCTCAGAATTGGCTTCACTCAAAGGCCATCTTATAAGAGGTGAATACTGCAATTGATTGTTTCCTTCTTCCATACTACAAGAAATAGCCTGTAGTAGACTGATGTTTTAAAAAAAAAATATGGAAAAAAAAAAAAAAAAAAAAAAAAAAGCNAAAATGACTGAGCTTTAGTTTATTTTATAATTTGTTAGAGTCAATTTAAATATTAGTCCGTGTATCATTTATAACTAGTAAATAGCTTATTTACTTGTAAATTGACGCCGTCATAGTTGGAAGAATTTAAGACGCCTCTACTAGAAGCTTTTATATCTATAAGGAATGTTTCCTTCTCTTTTCCAATTGACGTGGGATCTCACATGTCATTAGGTTTAATATAGGGGTCTCATGCTATTTGTTGAATTTATAATGTGCGCTTATGGTAGAATACTGAAAGGTAAATAGAAAGAAACTATTGTAGACGTGTTTTGGAGTATTTCTCGTATATTTCCTTCTAGAAGGAAGAGTTCCTCTAGTTCTATAACTTAGGCCTCTAGTTCTATAACTTTTTTGATAATGCTCTTTTCTTCCATATCATTAAAGAGAAGATTCTTCTGGAGTGCTTAATTTTCCACTAATTAGTTAGTGGGTTGAATCATTCATTAGATGGCTGATTGATGACATTCTATTTTGTCAATTTCTCTTCATGCACAACCCACTCATTAGGTGGCTGATTGATGACATTCTATTTTGTCAATTTCTCTTCATGCAAGTAATTTTGATTATCTTGGTTGATTGAGCTTTATCTACGGCTATGCTCGAGTTGATATCCTTTGTTCTTCTTGACTTTATCATGATAACGTCGATAGTTTTACTATTACAGGACATTCGACTATTTAATGTCGTGTTTTATTTTAGGCTATAGAGGCAATAAGGCATGGGTTTGAAGTGTATCAATATATTGTTATAAACTTATGTCCAACACTTGACAATTGTGTTTATTTCACCATTGCCTCTTACTTTACCGTTCTTCGATGCCCACGACAAAAACTTATCATCATTGTTTCTATGTTTTTTATTGACAGAATGACTCGATGGAATTTTTTAGAATATAACCAAGGAGATTTGGCTTCCTCAACTACAATTGTGACCCCCTCTTTTAACCTAGTCATACAAAGGGTGAAAGTAGTCGAGCAATTCGAAATCGAATTGCTCGATTTTTAACACTAAATGTAAGCCCCACATAGTAATGACAGTTATGAGAATCGGCCCCTCACATAGAAACGACATTTGTGAGCAACGACTTGTAAATTTGAGCAAACTAATATTTGGGTTGAACTTATCAAGGATGGCACATATTCTATTTCATGACCAATATCACTTTCGATTTGTTTAGTGTTATTGAAATGAAGTAGCATATGCAGTTTACTCTTTTCTTTTAGTCGACACTCACA

mRNA sequence

TGAATAAGGATAGACGTGGGGCATTGGTACGGAAGCGAGTGGCGCGAGTAGTAAAACTCTGCCACGAGTTAAAGCCCATCATAGCTCATACGCACTGACCCGACGACCGACCCAAGCGCAGCACTCAGTAGCAGCCTTTTATCAAGTCAAGGCCGGAGCCAATTCTCCTCCTCCTCCTCCTCCTCCTCCGCCTGCTCCTCCTCCTAGGGTTCCACTGGTTCCAATCCAATCTTATTTACCCGTTCTCTCACAAGCTTCTCCTGCTGATCGTCGTTTCTCATGGAGTCTCCAACGATGGACGAAACTAAGAATTCTGAAGCGCATTTGACATCAGCTGCAGCTTTTGTCGAAGGTGGAATCCAGGATGCTTGTGATGACGCTTGCAGTATATGTCTTGAAAACTTCTGTGACAATGATCCTTCAACGATGACCAGTTGCAAACATGAGTTTCATCTGCAGTGCGTTCTTGAATGGTGTCAGAGAAGCTCCCAATGCCCCATGTGTTGGCAACCTGTTAGTCTGAAGGATCCAACCAGTCAGGAGTTGCTCGAAGCAGTAGAACAAGAGAGAAGTTTTAGACTTAATCCAGTTAGAAACTCAACAATATTTCGACATCCCACTTTTGGTGACTTTGAGTTACAGCATCTGCCAGCTGGTGCTGATGAGGCTGACCTTGAAGAGCGTATACTCCAACACCTAGCTGCTGCAGCTGCCATGGGACAAGCTCGCCATAGTGCCAGAAGGGAAGGCCACAGACATCGGTCAGGAATTCATGGCCGTCCCCAATTGTTGGTGTTTTCTTCCCCTCCTAATTCTTCATCGACCTCTCAACTTCCTCGTGACAATCGGGAAGGTGAAGCAGCCTCAAGAATCATGGTAGCTACTGTATCACCACCTCAACCTGCTGGAGAAGAGTCTCCACAACTCAATGCTCCAGCATCTCCCGTGCAAACTGATCAGTCTTCTCCATCAGCACCTCAATACAGTCCACGTTCTGCCAGCCAACTTGGATCTCCTTCGAGCGATAGGAGATCCACCAGTCAACCAGTGCGAAGTAGTCAAGATAGAGCCGGACCATCATCAGAATTGCAATCACTCTCGGATTCACTGAAGTCTCGATTTAATGCAATGTCAATGAGATACAAAGATTCAATCGCAAAGAGCACAAGAGGCTGGAAGGAGAAATTGTTCTCTCGCAATACTTCAATGTCAGATATTGGCTCTGAGGTTAGAAGAGAGGTTAATGTTGGGATAGCAACGGTATCGCGCATGATGGAACGTCTTGAAACAAGAGATGCTAGAAAAAGTAGCAGTCCTGAGTCCAGTAATGTAGGGGATAACAACCCGGTTTCGGAATCAAATGATAGACGGACACCAAAGAATGGAGGAAACAATCCTTTGAGCGTCTCAAATAAAAAAGGTTCATGCCCTGCAGAATCCAGTTCAAGTTGAACATTCTCAGAATTGGCTTCACTCAAAGGCCATCTTATAAGAGAATGACTCGATGGAATTTTTTAGAATATAACCAAGGAGATTTGGCTTCCTCAACTACAATTGTGACCCCCTCTTTTAACCTAGTCATACAAAGGGTGAAAGTAGTCGAGCAATTCGAAATCGAATTGCTCGATTTTTAACACTAAATGTAAGCCCCACATAGTAATGACAGTTATGAGAATCGGCCCCTCACATAGAAACGACATTTGTGAGCAACGACTTGTAAATTTGAGCAAACTAATATTTGGGTTGAACTTATCAAGGATGGCACATATTCTATTTCATGACCAATATCACTTTCGATTTGTTTAGTGTTATTGAAATGAAGTAGCATATGCAGTTTACTCTTTTCTTTTAGTCGACACTCACA

Coding sequence (CDS)

ATGGAGTCTCCAACGATGGACGAAACTAAGAATTCTGAAGCGCATTTGACATCAGCTGCAGCTTTTGTCGAAGGTGGAATCCAGGATGCTTGTGATGACGCTTGCAGTATATGTCTTGAAAACTTCTGTGACAATGATCCTTCAACGATGACCAGTTGCAAACATGAGTTTCATCTGCAGTGCGTTCTTGAATGGTGTCAGAGAAGCTCCCAATGCCCCATGTGTTGGCAACCTGTTAGTCTGAAGGATCCAACCAGTCAGGAGTTGCTCGAAGCAGTAGAACAAGAGAGAAGTTTTAGACTTAATCCAGTTAGAAACTCAACAATATTTCGACATCCCACTTTTGGTGACTTTGAGTTACAGCATCTGCCAGCTGGTGCTGATGAGGCTGACCTTGAAGAGCGTATACTCCAACACCTAGCTGCTGCAGCTGCCATGGGACAAGCTCGCCATAGTGCCAGAAGGGAAGGCCACAGACATCGGTCAGGAATTCATGGCCGTCCCCAATTGTTGGTGTTTTCTTCCCCTCCTAATTCTTCATCGACCTCTCAACTTCCTCGTGACAATCGGGAAGGTGAAGCAGCCTCAAGAATCATGGTAGCTACTGTATCACCACCTCAACCTGCTGGAGAAGAGTCTCCACAACTCAATGCTCCAGCATCTCCCGTGCAAACTGATCAGTCTTCTCCATCAGCACCTCAATACAGTCCACGTTCTGCCAGCCAACTTGGATCTCCTTCGAGCGATAGGAGATCCACCAGTCAACCAGTGCGAAGTAGTCAAGATAGAGCCGGACCATCATCAGAATTGCAATCACTCTCGGATTCACTGAAGTCTCGATTTAATGCAATGTCAATGAGATACAAAGATTCAATCGCAAAGAGCACAAGAGGCTGGAAGGAGAAATTGTTCTCTCGCAATACTTCAATGTCAGATATTGGCTCTGAGGTTAGAAGAGAGGTTAATGTTGGGATAGCAACGGTATCGCGCATGATGGAACGTCTTGAAACAAGAGATGCTAGAAAAAGTAGCAGTCCTGAGTCCAGTAATGTAGGGGATAACAACCCGGTTTCGGAATCAAATGATAGACGGACACCAAAGAATGGAGGAAACAATCCTTTGAGCGTCTCAAATAAAAAAGGTTCATGCCCTGCAGAATCCAGTTCAAGTTGA

Protein sequence

MESPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQCVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQHLPAGADEADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSSTSQLPRDNREGEAASRIMVATVSPPQPAGEESPQLNAPASPVQTDQSSPSAPQYSPRSASQLGSPSSDRRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSESNDRRTPKNGGNNPLSVSNKKGSCPAESSSS

Homology

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BLAST of Cp4.1LG04g12500 vs. ExPASy Swiss-Prot
Match: Q9ZT42 (E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 5.4e-111
Identity = 232/386 (60.10%), Postives = 274/386 (70.98%), Query Frame = 0


Query: 8   ETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQCVLEWCQ 67
           ET  SE HLTSAAAFVEGGIQDACDDACSICLE+FC++DPST+TSCKHE+HLQC+LEWCQ
Sbjct: 6   ETTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQ 65

Query: 68  RSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQHLPAGA 127
           RSSQCPMCWQ +SLKDPTSQELLEAVEQER+FR NP RN+TIFRHPT GDFELQHLP G 
Sbjct: 66  RSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQHLPVGV 125

Query: 128 DEADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSSTSQLPR 187
           D A++EERI+QHLAAAAAMG+ARH  RREGHR RS   G  Q +VFSS PN+SS    P 
Sbjct: 126 DNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQPNASSPP--PH 185

Query: 188 DNREGEAASRIMVATVS--PPQPAGEESPQLNA-PASPVQTDQSSPSAPQYSPRSASQLG 247
                  + R    TVS  P    GE S Q N  P +     Q SPSA            
Sbjct: 186 PPMPSSPSQRDESDTVSNLPHNALGEGSHQSNTQPPTSSHPRQVSPSA------------ 245

Query: 248 SPSSDRRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEKLF 307
              S+ R  +Q   S QDRAGP SELQS S+SLKSR NA+S RYK+SI+K+TR WK++LF
Sbjct: 246 -SDSNSRPLNQSSPSEQDRAGP-SELQSFSESLKSRLNAVSTRYKESISKNTRNWKDRLF 305

Query: 308 SRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSESNDRR 367
           SRNTSM+D+GSEV+REV+ GIATVSRMMERLETR+  + S+   S+V +N+    +N+  
Sbjct: 306 SRNTSMADLGSEVKREVSAGIATVSRMMERLETRENSRPSTASVSDVSENHTPETNNEHN 365

Query: 368 TPKNGGNNPLSVSNKKGSCPAESSSS 391
               G  + ++    K +C   S SS
Sbjct: 366 RAAAGDEHSVNERGVKETCATGSGSS 375

[Close]

BLAST of Cp4.1LG04g12500 vs. ExPASy Swiss-Prot
Match: Q4TU14 (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.7e-37
Identity = 124/334 (37.13%), Postives = 175/334 (52.40%), Query Frame = 0


Query: 17  TSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQCVLEWCQRSSQCPMCW 76
           +S+A  V     +  DDACSICLE F   DPST+TSCKHE+HLQC++EW QRS +CP+CW
Sbjct: 28  SSSALVVASDDDNNTDDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICW 87

Query: 77  QPVSLKDPTSQELLEAVEQERSFRLNPVRNST-IFRHPTFGDFELQHLPAGADEADLEER 136
           Q   L+DP SQELL AVE+ER  +   + +S+ I  H +  DF  +     +  +  +E+
Sbjct: 88  QLFVLRDPASQELLAAVEKERLLKTRNISSSSPISIHHSHDDFHSEE--EESQFSSFDEQ 147

Query: 137 ILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSSTSQLPRDNREGEAA 196
            L+HL  AA     R   RR   +  S        LV SS P +   + L    R   A 
Sbjct: 148 FLRHLTEAA---HRRCLLRRRDGQISSS-------LVSSSDPTTIHPTDLVNLYRL-SAI 207

Query: 197 SRIMVATVSPPQPAGEESPQLNAPASPVQTDQSSPSAPQYSPRSASQLGSPSSDRRSTSQ 256
           S +     +P    G  +P      SPV    S P+       + S++    S  RS+  
Sbjct: 208 SHVEHQNSNPCPSPGSMTP------SPVSGHSSIPA----DSNNGSRISPGPSPSRSSQS 267

Query: 257 PVRSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEKLFSRNTSMSDIGS 316
           P          S E  SL +++KS+  A S +YK+SI+KS +G KEKL +RN S+ ++  
Sbjct: 268 P---------KSPEASSLPEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNSVKELSK 327

Query: 317 EVRREVNVGIATVSRMMERLETRDARKSSSPESS 350
            V+RE+N GIA V+RM+ER++    R   S   S
Sbjct: 328 GVQREMNAGIAGVARMIERMDFSSKRFGGSAHVS 329

[Close]

BLAST of Cp4.1LG04g12500 vs. ExPASy Swiss-Prot
Match: Q2HIJ8 (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RHB1A PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.9e-08
Identity = 25/55 (45.45%), Postives = 35/55 (63.64%), Query Frame = 0


Query: 29  DACDDACSICLENFCDNDPSTMTSCKHEFHLQCVLEWCQRSSQCPMCWQPVSLKD 84
           D  +D C IC E++   +P   T C+HEFHL C+LEW +RS +CP+C + V   D
Sbjct: 133 DEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDKEVVFDD 187

[Close]

BLAST of Cp4.1LG04g12500 vs. ExPASy Swiss-Prot
Match: Q8LE94 (E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g02290 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.5e-07
Identity = 20/44 (45.45%), Postives = 27/44 (61.36%), Query Frame = 0


Query: 32  DDACSICLENFCDNDPSTMTSCKHEFHLQCVLEWCQRSSQCPMC 76
           +D C  CLE +   +P  +T C H FHL C+ EW +RS  CP+C
Sbjct: 178 EDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVC 221

[Close]

BLAST of Cp4.1LG04g12500 vs. ExPASy Swiss-Prot
Match: Q93ZF6 (E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.2e-07
Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 0


Query: 33  DACSICLENFCDNDPSTMTSCKHEFHLQCVLEWCQRSSQCPMC 76
           D C ICLE +  ++P  +T C H+FHL C+L W +RS  CP+C
Sbjct: 102 DECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVC 144

[Close]

BLAST of Cp4.1LG04g12500 vs. NCBI nr
Match: XP_023531099.1 (E3 ubiquitin-protein ligase RHF2A-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 738 bits (1905), Expect = 6.95e-268
Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 0


Query: 3   SPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQCV 62
           SPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQCV
Sbjct: 5   SPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQCV 64

Query: 63  LEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQH 122
           LEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQH
Sbjct: 65  LEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQH 124

Query: 123 LPAGADEADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSST 182
           LPAGADEADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSST
Sbjct: 125 LPAGADEADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSST 184

Query: 183 SQLPRDNREGEAASRIMVATVSPPQPAGEESPQLNAPASPVQTDQSSPSAPQYSPRSASQ 242
           SQLPRDNREGEAASRIMVATVSPPQPAGEESPQLNAPASPVQTDQSSPSAPQYSPRSASQ
Sbjct: 185 SQLPRDNREGEAASRIMVATVSPPQPAGEESPQLNAPASPVQTDQSSPSAPQYSPRSASQ 244

Query: 243 LGSPSSDRRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEK 302
           LGSPSSDRRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEK
Sbjct: 245 LGSPSSDRRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEK 304

Query: 303 LFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSESND 362
           LFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSESND
Sbjct: 305 LFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSESND 364

Query: 363 RRTPKNGGNNPLSVSNKKGSCPAESSSS 390
           RRTPKNGGNNPLSVSNKKGSCPAESSSS
Sbjct: 365 RRTPKNGGNNPLSVSNKKGSCPAESSSS 392

[Close]

BLAST of Cp4.1LG04g12500 vs. NCBI nr
Match: XP_023531098.1 (E3 ubiquitin-protein ligase RHF2A-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 731 bits (1886), Expect = 9.96e-265
Identity = 390/408 (95.59%), Postives = 390/408 (95.59%), Query Frame = 0


Query: 1   MESPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQ 60
           MESPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQ
Sbjct: 1   MESPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQ 60

Query: 61  CVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL 120
           CVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL
Sbjct: 61  CVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL 120

Query: 121 QHLPAGADEADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS 180
           QHLPAGADEADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS
Sbjct: 121 QHLPAGADEADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS 180

Query: 181 STSQLPRDNREGEAASRIMVATVSPPQPAGEESPQLNAPASPVQTDQSSPSAPQYSPRSA 240
           STSQLPRDNREGEAASRIMVATVSPPQPAGEESPQLNAPASPVQTDQSSPSAPQYSPRSA
Sbjct: 181 STSQLPRDNREGEAASRIMVATVSPPQPAGEESPQLNAPASPVQTDQSSPSAPQYSPRSA 240

Query: 241 SQLGSPSSD------------------RRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFN 300
           SQLGSPSSD                  RRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFN
Sbjct: 241 SQLGSPSSDSYMEFIDHVLILLSHTVLRRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFN 300

Query: 301 AMSMRYKDSIAKSTRGWKEKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARK 360
           AMSMRYKDSIAKSTRGWKEKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARK
Sbjct: 301 AMSMRYKDSIAKSTRGWKEKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARK 360

Query: 361 SSSPESSNVGDNNPVSESNDRRTPKNGGNNPLSVSNKKGSCPAESSSS 390
           SSSPESSNVGDNNPVSESNDRRTPKNGGNNPLSVSNKKGSCPAESSSS
Sbjct: 361 SSSPESSNVGDNNPVSESNDRRTPKNGGNNPLSVSNKKGSCPAESSSS 408

[Close]

BLAST of Cp4.1LG04g12500 vs. NCBI nr
Match: KAG7022145.1 (E3 ubiquitin-protein ligase RHF2A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 726 bits (1874), Expect = 3.42e-263
Identity = 383/390 (98.21%), Postives = 386/390 (98.97%), Query Frame = 0


Query: 1   MESPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQ 60
           MESPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCD+DPSTMTSCKHEFHLQ
Sbjct: 1   MESPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQ 60

Query: 61  CVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL 120
           CVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL
Sbjct: 61  CVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL 120

Query: 121 QHLPAGADEADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS 180
           QHLPAGAD+ADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS
Sbjct: 121 QHLPAGADDADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS 180

Query: 181 STSQLPRDNREGEAASRIMVATVSPPQPAGEESPQLNAPASPVQTDQSSPSAPQYSPRSA 240
           STS LPRDNREGEAASRIMVATVSPPQPAGEESPQLNA ASPVQTDQSSPSAPQYS RSA
Sbjct: 181 STSPLPRDNREGEAASRIMVATVSPPQPAGEESPQLNASASPVQTDQSSPSAPQYSSRSA 240

Query: 241 SQLGSPSSDRRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWK 300
           SQLGSPSSDRRSTSQPV SSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWK
Sbjct: 241 SQLGSPSSDRRSTSQPVPSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWK 300

Query: 301 EKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSES 360
           EKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSES
Sbjct: 301 EKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSES 360

Query: 361 NDRRTPKNGGNNPLSVSNKKGSCPAESSSS 390
           NDRRTPKNGGNNPLSVSNK+GSCPAESSSS
Sbjct: 361 NDRRTPKNGGNNPLSVSNKEGSCPAESSSS 390

[Close]

BLAST of Cp4.1LG04g12500 vs. NCBI nr
Match: XP_023531096.1 (E3 ubiquitin-protein ligase RHF2A-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531097.1 E3 ubiquitin-protein ligase RHF2A-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 727 bits (1876), Expect = 3.59e-263
Identity = 388/406 (95.57%), Postives = 388/406 (95.57%), Query Frame = 0


Query: 3   SPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQCV 62
           SPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQCV
Sbjct: 5   SPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQCV 64

Query: 63  LEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQH 122
           LEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQH
Sbjct: 65  LEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQH 124

Query: 123 LPAGADEADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSST 182
           LPAGADEADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSST
Sbjct: 125 LPAGADEADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSST 184

Query: 183 SQLPRDNREGEAASRIMVATVSPPQPAGEESPQLNAPASPVQTDQSSPSAPQYSPRSASQ 242
           SQLPRDNREGEAASRIMVATVSPPQPAGEESPQLNAPASPVQTDQSSPSAPQYSPRSASQ
Sbjct: 185 SQLPRDNREGEAASRIMVATVSPPQPAGEESPQLNAPASPVQTDQSSPSAPQYSPRSASQ 244

Query: 243 LGSPSSD------------------RRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFNAM 302
           LGSPSSD                  RRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFNAM
Sbjct: 245 LGSPSSDSYMEFIDHVLILLSHTVLRRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFNAM 304

Query: 303 SMRYKDSIAKSTRGWKEKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSS 362
           SMRYKDSIAKSTRGWKEKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSS
Sbjct: 305 SMRYKDSIAKSTRGWKEKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSS 364

Query: 363 SPESSNVGDNNPVSESNDRRTPKNGGNNPLSVSNKKGSCPAESSSS 390
           SPESSNVGDNNPVSESNDRRTPKNGGNNPLSVSNKKGSCPAESSSS
Sbjct: 365 SPESSNVGDNNPVSESNDRRTPKNGGNNPLSVSNKKGSCPAESSSS 410

[Close]

BLAST of Cp4.1LG04g12500 vs. NCBI nr
Match: KAG6588231.1 (E3 ubiquitin-protein ligase RHF2A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 723 bits (1867), Expect = 3.98e-262
Identity = 382/390 (97.95%), Postives = 385/390 (98.72%), Query Frame = 0


Query: 1   MESPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQ 60
           MESPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCD+DPSTMTSCKHEFHLQ
Sbjct: 1   MESPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQ 60

Query: 61  CVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL 120
           CVLEWCQRSSQCPMCWQPVSLKDPTSQ LLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL
Sbjct: 61  CVLEWCQRSSQCPMCWQPVSLKDPTSQGLLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL 120

Query: 121 QHLPAGADEADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS 180
           QHLPAGAD+ADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS
Sbjct: 121 QHLPAGADDADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS 180

Query: 181 STSQLPRDNREGEAASRIMVATVSPPQPAGEESPQLNAPASPVQTDQSSPSAPQYSPRSA 240
           STS LPRDNREGEAASRIMVATVSPPQPAGEESPQLNA ASPVQTDQSSPSAPQYS RSA
Sbjct: 181 STSPLPRDNREGEAASRIMVATVSPPQPAGEESPQLNASASPVQTDQSSPSAPQYSSRSA 240

Query: 241 SQLGSPSSDRRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWK 300
           SQLGSPSSDRRSTSQPV SSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWK
Sbjct: 241 SQLGSPSSDRRSTSQPVPSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWK 300

Query: 301 EKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSES 360
           EKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSES
Sbjct: 301 EKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSES 360

Query: 361 NDRRTPKNGGNNPLSVSNKKGSCPAESSSS 390
           NDRRTPKNGGNNPLSVSNK+GSCPAESSSS
Sbjct: 361 NDRRTPKNGGNNPLSVSNKEGSCPAESSSS 390

[Close]

BLAST of Cp4.1LG04g12500 vs. ExPASy TrEMBL
Match: A0A6J1EBH9 (E3 ubiquitin-protein ligase RHF2A-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111432630 PE=4 SV=1)

HSP 1 Score: 721 bits (1861), Expect = 1.71e-261
Identity = 380/390 (97.44%), Postives = 385/390 (98.72%), Query Frame = 0


Query: 1   MESPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQ 60
           + SPTMDETKNSEAHLTSAAAFV+GGIQDACDDACSICLENFCD+DPSTMTSCKHEFHLQ
Sbjct: 3   VRSPTMDETKNSEAHLTSAAAFVKGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQ 62

Query: 61  CVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL 120
           CVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL
Sbjct: 63  CVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL 122

Query: 121 QHLPAGADEADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS 180
           QHLPAGAD+ADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS
Sbjct: 123 QHLPAGADDADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS 182

Query: 181 STSQLPRDNREGEAASRIMVATVSPPQPAGEESPQLNAPASPVQTDQSSPSAPQYSPRSA 240
           STS LPRDNREGEAASRIMVATVSPPQPAGEESPQLNA ASPVQTDQSSPSAPQYS RSA
Sbjct: 183 STSPLPRDNREGEAASRIMVATVSPPQPAGEESPQLNASASPVQTDQSSPSAPQYSSRSA 242

Query: 241 SQLGSPSSDRRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWK 300
           SQLGSPSSDRRSTSQPV SSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWK
Sbjct: 243 SQLGSPSSDRRSTSQPVPSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWK 302

Query: 301 EKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSES 360
           EKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSES
Sbjct: 303 EKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSES 362

Query: 361 NDRRTPKNGGNNPLSVSNKKGSCPAESSSS 390
           NDRRTPKNGGNNPLSVSNK+GSCPAESSSS
Sbjct: 363 NDRRTPKNGGNNPLSVSNKEGSCPAESSSS 392

[Close]

BLAST of Cp4.1LG04g12500 vs. ExPASy TrEMBL
Match: A0A6J1EEY4 (E3 ubiquitin-protein ligase RHF2A-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432630 PE=4 SV=1)

HSP 1 Score: 713 bits (1841), Expect = 3.47e-258
Identity = 382/408 (93.63%), Postives = 386/408 (94.61%), Query Frame = 0


Query: 1   MESPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQ 60
           MESPTMDETKNSEAHLTSAAAFV+GGIQDACDDACSICLENFCD+DPSTMTSCKHEFHLQ
Sbjct: 1   MESPTMDETKNSEAHLTSAAAFVKGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQ 60

Query: 61  CVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL 120
           CVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL
Sbjct: 61  CVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL 120

Query: 121 QHLPAGADEADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS 180
           QHLPAGAD+ADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS
Sbjct: 121 QHLPAGADDADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS 180

Query: 181 STSQLPRDNREGEAASRIMVATVSPPQPAGEESPQLNAPASPVQTDQSSPSAPQYSPRSA 240
           STS LPRDNREGEAASRIMVATVSPPQPAGEESPQLNA ASPVQTDQSSPSAPQYS RSA
Sbjct: 181 STSPLPRDNREGEAASRIMVATVSPPQPAGEESPQLNASASPVQTDQSSPSAPQYSSRSA 240

Query: 241 SQLGSPSSD------------------RRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFN 300
           SQLGSPSSD                  RRSTSQPV SSQDRAGPSSELQSLSDSLKSRFN
Sbjct: 241 SQLGSPSSDSYMEFIGHVLILLSHTVLRRSTSQPVPSSQDRAGPSSELQSLSDSLKSRFN 300

Query: 301 AMSMRYKDSIAKSTRGWKEKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARK 360
           AMSMRYKDSIAKSTRGWKEKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARK
Sbjct: 301 AMSMRYKDSIAKSTRGWKEKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARK 360

Query: 361 SSSPESSNVGDNNPVSESNDRRTPKNGGNNPLSVSNKKGSCPAESSSS 390
           SSSPESSNVGDNNPVSESNDRRTPKNGGNNPLSVSNK+GSCPAESSSS
Sbjct: 361 SSSPESSNVGDNNPVSESNDRRTPKNGGNNPLSVSNKEGSCPAESSSS 408

[Close]

BLAST of Cp4.1LG04g12500 vs. ExPASy TrEMBL
Match: A0A6J1ID33 (E3 ubiquitin-protein ligase RHF2A-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111472697 PE=4 SV=1)

HSP 1 Score: 711 bits (1836), Expect = 1.10e-257
Identity = 375/388 (96.65%), Postives = 380/388 (97.94%), Query Frame = 0


Query: 3   SPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQCV 62
           SPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCD+DPSTMTSCKHEFHLQCV
Sbjct: 5   SPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQCV 64

Query: 63  LEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQH 122
           LEWCQRSSQCPMCWQP+SLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQH
Sbjct: 65  LEWCQRSSQCPMCWQPISLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQH 124

Query: 123 LPAGADEADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSST 182
           LPAGA +ADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSST
Sbjct: 125 LPAGAGDADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSST 184

Query: 183 SQLPRDNREGEAASRIMVATVSPPQPAGEESPQLNAPASPVQTDQSSPSAPQYSPRSASQ 242
           S LPRDN+EGEAASRIMVATVSPPQP GEESPQLNA ASPVQTDQSSPSAPQYS RSASQ
Sbjct: 185 SPLPRDNQEGEAASRIMVATVSPPQPVGEESPQLNASASPVQTDQSSPSAPQYSSRSASQ 244

Query: 243 LGSPSSDRRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEK 302
           LGSPSSDRRSTSQPV SSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEK
Sbjct: 245 LGSPSSDRRSTSQPVSSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEK 304

Query: 303 LFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSESND 362
           LFSRNTSMSDIGSEVRREVNVGIATVSRMME LETRDARKSSSPESSNVGDNNPVSESND
Sbjct: 305 LFSRNTSMSDIGSEVRREVNVGIATVSRMMEHLETRDARKSSSPESSNVGDNNPVSESND 364

Query: 363 RRTPKNGGNNPLSVSNKKGSCPAESSSS 390
           RRTPKN GNNPLSVSNK+GSCPAESSSS
Sbjct: 365 RRTPKNEGNNPLSVSNKEGSCPAESSSS 392

[Close]

BLAST of Cp4.1LG04g12500 vs. ExPASy TrEMBL
Match: A0A6J1EEX9 (E3 ubiquitin-protein ligase RHF2A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432630 PE=4 SV=1)

HSP 1 Score: 710 bits (1832), Expect = 8.78e-257
Identity = 380/408 (93.14%), Postives = 385/408 (94.36%), Query Frame = 0


Query: 1   MESPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQ 60
           + SPTMDETKNSEAHLTSAAAFV+GGIQDACDDACSICLENFCD+DPSTMTSCKHEFHLQ
Sbjct: 3   VRSPTMDETKNSEAHLTSAAAFVKGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQ 62

Query: 61  CVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL 120
           CVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL
Sbjct: 63  CVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL 122

Query: 121 QHLPAGADEADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS 180
           QHLPAGAD+ADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS
Sbjct: 123 QHLPAGADDADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS 182

Query: 181 STSQLPRDNREGEAASRIMVATVSPPQPAGEESPQLNAPASPVQTDQSSPSAPQYSPRSA 240
           STS LPRDNREGEAASRIMVATVSPPQPAGEESPQLNA ASPVQTDQSSPSAPQYS RSA
Sbjct: 183 STSPLPRDNREGEAASRIMVATVSPPQPAGEESPQLNASASPVQTDQSSPSAPQYSSRSA 242

Query: 241 SQLGSPSSD------------------RRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFN 300
           SQLGSPSSD                  RRSTSQPV SSQDRAGPSSELQSLSDSLKSRFN
Sbjct: 243 SQLGSPSSDSYMEFIGHVLILLSHTVLRRSTSQPVPSSQDRAGPSSELQSLSDSLKSRFN 302

Query: 301 AMSMRYKDSIAKSTRGWKEKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARK 360
           AMSMRYKDSIAKSTRGWKEKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARK
Sbjct: 303 AMSMRYKDSIAKSTRGWKEKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARK 362

Query: 361 SSSPESSNVGDNNPVSESNDRRTPKNGGNNPLSVSNKKGSCPAESSSS 390
           SSSPESSNVGDNNPVSESNDRRTPKNGGNNPLSVSNK+GSCPAESSSS
Sbjct: 363 SSSPESSNVGDNNPVSESNDRRTPKNGGNNPLSVSNKEGSCPAESSSS 410

[Close]

BLAST of Cp4.1LG04g12500 vs. ExPASy TrEMBL
Match: A0A6J1IF73 (E3 ubiquitin-protein ligase RHF2A-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472697 PE=4 SV=1)

HSP 1 Score: 704 bits (1817), Expect = 1.57e-254
Identity = 377/408 (92.40%), Postives = 382/408 (93.63%), Query Frame = 0


Query: 1   MESPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQ 60
           MESPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCD+DPSTMTSCKHEFHLQ
Sbjct: 1   MESPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQ 60

Query: 61  CVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL 120
           CVLEWCQRSSQCPMCWQP+SLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL
Sbjct: 61  CVLEWCQRSSQCPMCWQPISLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL 120

Query: 121 QHLPAGADEADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS 180
           QHLPAGA +ADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS
Sbjct: 121 QHLPAGAGDADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS 180

Query: 181 STSQLPRDNREGEAASRIMVATVSPPQPAGEESPQLNAPASPVQTDQSSPSAPQYSPRSA 240
           STS LPRDN+EGEAASRIMVATVSPPQP GEESPQLNA ASPVQTDQSSPSAPQYS RSA
Sbjct: 181 STSPLPRDNQEGEAASRIMVATVSPPQPVGEESPQLNASASPVQTDQSSPSAPQYSSRSA 240

Query: 241 SQLGSPSSD------------------RRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFN 300
           SQLGSPSSD                  RRSTSQPV SSQDRAGPSSELQSLSDSLKSRFN
Sbjct: 241 SQLGSPSSDSYMEFIGHVLILLSHTILRRSTSQPVSSSQDRAGPSSELQSLSDSLKSRFN 300

Query: 301 AMSMRYKDSIAKSTRGWKEKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARK 360
           AMSMRYKDSIAKSTRGWKEKLFSRNTSMSDIGSEVRREVNVGIATVSRMME LETRDARK
Sbjct: 301 AMSMRYKDSIAKSTRGWKEKLFSRNTSMSDIGSEVRREVNVGIATVSRMMEHLETRDARK 360

Query: 361 SSSPESSNVGDNNPVSESNDRRTPKNGGNNPLSVSNKKGSCPAESSSS 390
           SSSPESSNVGDNNPVSESNDRRTPKN GNNPLSVSNK+GSCPAESSSS
Sbjct: 361 SSSPESSNVGDNNPVSESNDRRTPKNEGNNPLSVSNKEGSCPAESSSS 408

[Close]

BLAST of Cp4.1LG04g12500 vs. TAIR 10
Match: AT5G22000.1 (RING-H2 group F2A )

HSP 1 Score: 402.5 bits (1033), Expect = 3.8e-112
Identity = 232/386 (60.10%), Postives = 274/386 (70.98%), Query Frame = 0


Query: 8   ETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQCVLEWCQ 67
           ET  SE HLTSAAAFVEGGIQDACDDACSICLE+FC++DPST+TSCKHE+HLQC+LEWCQ
Sbjct: 6   ETTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQ 65

Query: 68  RSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQHLPAGA 127
           RSSQCPMCWQ +SLKDPTSQELLEAVEQER+FR NP RN+TIFRHPT GDFELQHLP G 
Sbjct: 66  RSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQHLPVGV 125

Query: 128 DEADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSSTSQLPR 187
           D A++EERI+QHLAAAAAMG+ARH  RREGHR RS   G  Q +VFSS PN+SS    P 
Sbjct: 126 DNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQPNASSPP--PH 185

Query: 188 DNREGEAASRIMVATVS--PPQPAGEESPQLNA-PASPVQTDQSSPSAPQYSPRSASQLG 247
                  + R    TVS  P    GE S Q N  P +     Q SPSA            
Sbjct: 186 PPMPSSPSQRDESDTVSNLPHNALGEGSHQSNTQPPTSSHPRQVSPSA------------ 245

Query: 248 SPSSDRRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEKLF 307
              S+ R  +Q   S QDRAGP SELQS S+SLKSR NA+S RYK+SI+K+TR WK++LF
Sbjct: 246 -SDSNSRPLNQSSPSEQDRAGP-SELQSFSESLKSRLNAVSTRYKESISKNTRNWKDRLF 305

Query: 308 SRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSESNDRR 367
           SRNTSM+D+GSEV+REV+ GIATVSRMMERLETR+  + S+   S+V +N+    +N+  
Sbjct: 306 SRNTSMADLGSEVKREVSAGIATVSRMMERLETRENSRPSTASVSDVSENHTPETNNEHN 365

Query: 368 TPKNGGNNPLSVSNKKGSCPAESSSS 391
               G  + ++    K +C   S SS
Sbjct: 366 RAAAGDEHSVNERGVKETCATGSGSS 375

[Close]

BLAST of Cp4.1LG04g12500 vs. TAIR 10
Match: AT5G22000.3 (RING-H2 group F2A )

HSP 1 Score: 402.5 bits (1033), Expect = 3.8e-112
Identity = 232/386 (60.10%), Postives = 274/386 (70.98%), Query Frame = 0


Query: 8   ETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQCVLEWCQ 67
           ET  SE HLTSAAAFVEGGIQDACDDACSICLE+FC++DPST+TSCKHE+HLQC+LEWCQ
Sbjct: 6   ETTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQ 65

Query: 68  RSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQHLPAGA 127
           RSSQCPMCWQ +SLKDPTSQELLEAVEQER+FR NP RN+TIFRHPT GDFELQHLP G 
Sbjct: 66  RSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQHLPVGV 125

Query: 128 DEADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSSTSQLPR 187
           D A++EERI+QHLAAAAAMG+ARH  RREGHR RS   G  Q +VFSS PN+SS    P 
Sbjct: 126 DNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQPNASSPP--PH 185

Query: 188 DNREGEAASRIMVATVS--PPQPAGEESPQLNA-PASPVQTDQSSPSAPQYSPRSASQLG 247
                  + R    TVS  P    GE S Q N  P +     Q SPSA            
Sbjct: 186 PPMPSSPSQRDESDTVSNLPHNALGEGSHQSNTQPPTSSHPRQVSPSA------------ 245

Query: 248 SPSSDRRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEKLF 307
              S+ R  +Q   S QDRAGP SELQS S+SLKSR NA+S RYK+SI+K+TR WK++LF
Sbjct: 246 -SDSNSRPLNQSSPSEQDRAGP-SELQSFSESLKSRLNAVSTRYKESISKNTRNWKDRLF 305

Query: 308 SRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSESNDRR 367
           SRNTSM+D+GSEV+REV+ GIATVSRMMERLETR+  + S+   S+V +N+    +N+  
Sbjct: 306 SRNTSMADLGSEVKREVSAGIATVSRMMERLETRENSRPSTASVSDVSENHTPETNNEHN 365

Query: 368 TPKNGGNNPLSVSNKKGSCPAESSSS 391
               G  + ++    K +C   S SS
Sbjct: 366 RAAAGDEHSVNERGVKETCATGSGSS 375

[Close]

BLAST of Cp4.1LG04g12500 vs. TAIR 10
Match: AT5G22000.2 (RING-H2 group F2A )

HSP 1 Score: 401.0 bits (1029), Expect = 1.1e-111
Identity = 231/385 (60.00%), Postives = 273/385 (70.91%), Query Frame = 0


Query: 9   TKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQCVLEWCQR 68
           T  SE HLTSAAAFVEGGIQDACDDACSICLE+FC++DPST+TSCKHE+HLQC+LEWCQR
Sbjct: 7   TTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQR 66

Query: 69  SSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQHLPAGAD 128
           SSQCPMCWQ +SLKDPTSQELLEAVEQER+FR NP RN+TIFRHPT GDFELQHLP G D
Sbjct: 67  SSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQHLPVGVD 126

Query: 129 EADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSSTSQLPRD 188
            A++EERI+QHLAAAAAMG+ARH  RREGHR RS   G  Q +VFSS PN+SS    P  
Sbjct: 127 NAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQPNASSPP--PHP 186

Query: 189 NREGEAASRIMVATVS--PPQPAGEESPQLNA-PASPVQTDQSSPSAPQYSPRSASQLGS 248
                 + R    TVS  P    GE S Q N  P +     Q SPSA             
Sbjct: 187 PMPSSPSQRDESDTVSNLPHNALGEGSHQSNTQPPTSSHPRQVSPSA------------- 246

Query: 249 PSSDRRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEKLFS 308
             S+ R  +Q   S QDRAGP SELQS S+SLKSR NA+S RYK+SI+K+TR WK++LFS
Sbjct: 247 SDSNSRPLNQSSPSEQDRAGP-SELQSFSESLKSRLNAVSTRYKESISKNTRNWKDRLFS 306

Query: 309 RNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSESNDRRT 368
           RNTSM+D+GSEV+REV+ GIATVSRMMERLETR+  + S+   S+V +N+    +N+   
Sbjct: 307 RNTSMADLGSEVKREVSAGIATVSRMMERLETRENSRPSTASVSDVSENHTPETNNEHNR 366

Query: 369 PKNGGNNPLSVSNKKGSCPAESSSS 391
              G  + ++    K +C   S SS
Sbjct: 367 AAAGDEHSVNERGVKETCATGSGSS 375

[Close]

BLAST of Cp4.1LG04g12500 vs. TAIR 10
Match: AT4G14220.1 (RING-H2 group F1A )

HSP 1 Score: 156.4 bits (394), Expect = 4.8e-38
Identity = 124/334 (37.13%), Postives = 175/334 (52.40%), Query Frame = 0


Query: 17  TSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQCVLEWCQRSSQCPMCW 76
           +S+A  V     +  DDACSICLE F   DPST+TSCKHE+HLQC++EW QRS +CP+CW
Sbjct: 28  SSSALVVASDDDNNTDDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICW 87

Query: 77  QPVSLKDPTSQELLEAVEQERSFRLNPVRNST-IFRHPTFGDFELQHLPAGADEADLEER 136
           Q   L+DP SQELL AVE+ER  +   + +S+ I  H +  DF  +     +  +  +E+
Sbjct: 88  QLFVLRDPASQELLAAVEKERLLKTRNISSSSPISIHHSHDDFHSEE--EESQFSSFDEQ 147

Query: 137 ILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSSTSQLPRDNREGEAA 196
            L+HL  AA     R   RR   +  S        LV SS P +   + L    R   A 
Sbjct: 148 FLRHLTEAA---HRRCLLRRRDGQISSS-------LVSSSDPTTIHPTDLVNLYRL-SAI 207

Query: 197 SRIMVATVSPPQPAGEESPQLNAPASPVQTDQSSPSAPQYSPRSASQLGSPSSDRRSTSQ 256
           S +     +P    G  +P      SPV    S P+       + S++    S  RS+  
Sbjct: 208 SHVEHQNSNPCPSPGSMTP------SPVSGHSSIPA----DSNNGSRISPGPSPSRSSQS 267

Query: 257 PVRSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEKLFSRNTSMSDIGS 316
           P          S E  SL +++KS+  A S +YK+SI+KS +G KEKL +RN S+ ++  
Sbjct: 268 P---------KSPEASSLPEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNSVKELSK 327

Query: 317 EVRREVNVGIATVSRMMERLETRDARKSSSPESS 350
            V+RE+N GIA V+RM+ER++    R   S   S
Sbjct: 328 GVQREMNAGIAGVARMIERMDFSSKRFGGSAHVS 329

[Close]

BLAST of Cp4.1LG04g12500 vs. TAIR 10
Match: AT4G00335.1 (RING-H2 finger B1A )

HSP 1 Score: 61.2 bits (147), Expect = 2.1e-09
Identity = 25/55 (45.45%), Postives = 35/55 (63.64%), Query Frame = 0


Query: 29  DACDDACSICLENFCDNDPSTMTSCKHEFHLQCVLEWCQRSSQCPMCWQPVSLKD 84
           D  +D C IC E++   +P   T C+HEFHL C+LEW +RS +CP+C + V   D
Sbjct: 133 DEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDKEVVFDD 187

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g12500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT42	5.4e-111	60.10	E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 ...	[more]
Q4TU14	6.7e-37	37.13	E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 ...	[more]
Q2HIJ8	2.9e-08	45.45	Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q8LE94	1.5e-07	45.45	E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g022...	[more]
Q93ZF6	4.2e-07	48.84	E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 ...	[more]

BLAST of Cp4.1LG04g12500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023531099.1	6.95e-268	100.00	E3 ubiquitin-protein ligase RHF2A-like isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_023531098.1	9.96e-265	95.59	E3 ubiquitin-protein ligase RHF2A-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
KAG7022145.1	3.42e-263	98.21	E3 ubiquitin-protein ligase RHF2A [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023531096.1	3.59e-263	95.57	E3 ubiquitin-protein ligase RHF2A-like isoform X1 [Cucurbita pepo subsp. pepo] >...	[more]
KAG6588231.1	3.98e-262	97.95	E3 ubiquitin-protein ligase RHF2A, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cp4.1LG04g12500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EBH9	1.71e-261	97.44	E3 ubiquitin-protein ligase RHF2A-like isoform X3 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1EEY4	3.47e-258	93.63	E3 ubiquitin-protein ligase RHF2A-like isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1ID33	1.10e-257	96.65	E3 ubiquitin-protein ligase RHF2A-like isoform X3 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1EEX9	8.78e-257	93.14	E3 ubiquitin-protein ligase RHF2A-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1IF73	1.57e-254	92.40	E3 ubiquitin-protein ligase RHF2A-like isoform X2 OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of Cp4.1LG04g12500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22000.1	3.8e-112	60.10	RING-H2 group F2A	[more]
AT5G22000.3	3.8e-112	60.10	RING-H2 group F2A	[more]
AT5G22000.2	1.1e-111	60.00	RING-H2 group F2A	[more]
AT4G14220.1	4.8e-38	37.13	RING-H2 group F1A	[more]
AT4G00335.1	2.1e-09	45.45	RING-H2 finger B1A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 35..75 e-value: 3.7E-5 score: 33.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 34..75 e-value: 1.4E-8 score: 35.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 35..75 score: 12.120453
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 14..84 e-value: 5.7E-14 score: 53.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 332..390
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 344..390
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..189
None	No IPR available	PANTHER	PTHR46463	ZINC FINGER, RING/FYVE/PHD-TYPE	coord: 4..389
None	No IPR available	PANTHER	PTHR46463:SF27	E3 UBIQUITIN-PROTEIN LIGASE RHF2A	coord: 4..389
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 28..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g12500.1	Cp4.1LG04g12500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0004842	ubiquitin-protein transferase activity