Cp4.1LG04g12500 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAATAAGGATAGACGTGGGGCATTGGTACGGAAGCGAGTGGCGCGAGTAGTAAAACTCTGCCACGAGTTAAAGCCCATCATAGCTCATACGCACTGACCCGACGACCGACCCAAGCGCAGCACTCAGTAGCAGCCTTTTATCAAGTCAAGGCCGGAGCCAATTCTCCTCCTCCTCCTCCTCCTCCTCCGCCTGCTCCTCCTCCTAGGGTTCCACTGGTTCCAATCCAATCTTATTTACCCGTTCTCTCACAAGCTTCTCCTGCTGATCGTCGTTTCTCATGGAGGTAACTTTCTTCCCCTAAATCTCTTCTCTCTTCCTTCTTTTTGCGTTTCATGTCTCTATCTATCTTTAATTCTCTCTTTGATGAATATTATTGTGCCTACTTTTCTTCCTTTTTTCCGGATTCCGTTTTTCTTGGCTGTTGTTCACCGGATGGATTTATTCTGTTACTGGATTCTTTTACTTTTTTTTAATCTTGTTTTCATTGAGTATCGGAACTGGAGAGGAATGGCTTTGTTATCCTTTTCAAATGTACTTTCCTCTTGAATTTTCATTCTGGCTTTCTCTATATGTAGTTTTTGCGATCTTTTATTACTGTTCTCTTCGAACTAGCTGCTTGTTGCTTTTCGCTCTGGAAATTGTGGTTTTGAATTCTTTGATTCTTTATGGATGTTTGGGTAGGCTGTTTGTGCGTGGTTTAATTCACTTCAAATTTGTGTCGTGTCGCTAATTTATAATTGTTAGCACTTGTTTATCATTTCCTTGTTTAGTTGCTGCTTATATATCACGCAATAGATCATGTGTTTCTTGTATATTTTTAAGTTTTTCTTGGTGGTGATGATTTTTTTTTTTTTAAATTCGTGTAGTCTCCAACGATGGACGAAACTAAGAATTCTGAAGCGCATTTGACATCAGCTGCAGCTTTTGTCGAAGGTGGAATCCAGGATGCTTGTGATGACGCTTGCAGTATATGTCTTGAAAACTTCTGTGACAATGATCCTTCAACGGTAGTACTTATAGTGTGATTTGATTTTTAACTGGAAGTCAGATGGTCTGTTCTACTTAGTCAGTTGCTATATTTTGTTCAGATGACCAGTTGCAAACATGAGTTTCATCTGCAGTGCGTTCTTGAATGGTAATTTCTTTTTTTTTTTTTTTTTCAATATCTGTTTGAGATATCAGATCTGCTCGTGATCATCTTGTTTTACTATTGATTTGATTACGAAGACAGTGGATGTTTGGAAGACTACCAGATACCTGCCTCTAACTGTGGCTTCTTTTTGTATTTATACAGTTTCGTCAATTAAGTTCATTTGATGCACCAATTTGTAACAACCAGGGGTTCTTGGGCATTTCCCTTCTTTTATAATTTTCACCAGCCAATGAAAAGTATCTTATTTCCTTTTTCCTCCAAAAAGAAAGAAAAAATTATAGGGAAGTTCTAATACTTTGAAAGGGTTAGTAGATCATCATATAAGTAGAATCTTACGTATTTGAATTGTGAGACGGTTGATTTCTCAGTGCTAGAAATGAATCCAAATTTGAAAGACCATGCTAGGTACCTCGGGGGTGTAAGACTTAATAAAGTATCTGGGTCTGTTGCTATGACAGTTCTTCTATTGACTAGTGTCCAGACTACCAATCTATGATGTACTGGTGGGGATGGAAGTGTGTATGAGCTGTAAGCTGGTAAGCAATATGACTTACTACCTTCATTGTTAGTATCACATGTATTTAACATCTAGGTGATAGCTTATAGTGGTAAAGATGGTGGGAATTGGATGTTCTTCGTATTTCGAGGTATGATGTGCCTGAGTTTTCTAATATCATCTCCAGAATGTTGAGACGAGAGAAAAAGGTCAGCAGACCTCTTGCCATGTGGACATTTTCCTTGGATGGTTGAAGAAAATGGTGAGGATGAAAGCTAACTTCAAGAGTTGGATTTTGTTTTGAAGATTCTTGGATTTAACCAAGTGATCGTGGTTTTAACCCATGCCCAGCATTGCCTGCTTGGAATATTAAAAATTTGACACAGTAAACACTGGGTGGCTAGAGGATTTTGGGTAGAAATGATGTATTCATGTGAGGATTAAACTATACATGAATACTTATTTTTATTGCTTTTTCATTCTCTTAATAGTATTATACGTTGATAAAAAACTAAAAAAATAAAAAAATAAAAGAAAAGAAAAGAATTTTATAAAATATAATTGCAAATTGCAAAAAATATGATTTTCAAAAGCAACCAACAGATATGGACTTCAAGGCAAGACAGCCTTCCTGATGATCATTCCTGTAAAATCCCAACCTCTGATTCTTTGAAGCTTATCTTGACATTCCATCTTATCTTCTGAAACCAACACTTCTTTTGATGTGATCATATTTGGAAATTAAGTGCAAAATATCTTAGCAGACCTGTATAGCAAATATTTATATGCCTTTCAATGTCAAGTTGTGAGTTTTTCAAATATTTTTTGCAGATGCCTAAATTTTTTTATTTGAATGCTCGTCTATTTCTTTGATGTGCGTTTGCACTTATTCTGCATAGGAGTTTGTTGCGTATCACTTTTTACAAGCAATTGATCTCTAATGTATGTGATTTCAACATATTGAATCTCAAAGGAGAGATTATCTTCTGACAAAGAAAAGAAAGAGAGTTTTTGTGGGTAGTATCCATTGCAAGATCGTTTCCTGGACTTGAATATGAGCCGTAGTTGTTTGCTACCCTATTCTGTAAGCTCTATCATTGGAAAAGGCTAAGGATCACTGGATTCTCATAACCATTTTTTGACGTTTCTTTTTGGAAAAAAATTCTCTGATTTCAACCATGGGTACTCAATCTTATGGAACTGTTCGCAACCTCAAGTCTTCTAACAAGGAAGACCTACTTTGGTGTCCTTGGCCTAAAATAGAGAAGACCTACTTTGGAAGTGTGATAATATGTGTCTTTTATAACCAAATATCTATTAACTGATTTACGGGAGGCTTCTATTTTGGGTGGTACTTTATGCTTCTTCCTCTGACGGTTTTTCTTTAAAAAAGTTGGTGCTTTCTTTGGCAGTTTTCTCATGAAGGAATTATTACTTAGTACAAGATCCAGAAGAGGCACCCCTGTATTGTTCTTTTTTTAAATCTGGTCTTGGTCATATATTGAAGTGAAACAAAATAGATTGGTTTGGGCTTTGATTGAGTGAACCAATCATCATTAAACAAAAAATCATTTAAACATAGTTCCATTCAGAATACCGTGCTGTCTAATTACTTAGATTATTAACTAACAATAAGTTGGCTTGGATAGTCCATTATCTGCTTCTTAGGCTGCTTCTGTTGTGATTCTGATCCTATGAATCATATATTTTGTTACTTTTAGATTGAGGGGTTTGTGTTGTTTATAATATGTTTATATATTTCTTTCATTTTTTGCCATGATGCTTTATGGTGGTAGGGCTCAGTTGGGAGTGGTTTTCTTTCAGTTCTACTGTATGATAGTTTTTTTAGGGAAGGTTCAAATTTCAAATTTCTTAGACTAGAGTTCAGGCGGTTATTGTTTTAAGTAGAAATGTAAAACATATTATTATTAGTTTTAAGAAGGTTGGAAATTATATAAAGCTTCACAGTGAATAAAAAATGGGAAGAACATTTTGAATTGAAAAGCCATAGACCAGAAACGTGATATTAATCTGCAAAGAAATTGAAATCCCGTCTTCATCAAGCAAATTATTCTGAAATTTCTCAAGTACCTCTCTTTAGCCAGTTACTCCACAACATGATCAATACTCCCAGCTCTGCCGAAGTTGTGCATTATTTTCTGCATTAAAATGAAGTTTGAGGTTATGACTGGAATTTAAATTTGATTGGTTCAAGCATGTTTATTTTGTCCCATCTTTTAATAGGTGTCAGAGAAGCTCCCAATGCCCCATGTGTTGGCAACCTGTTAGTCTGAAGGATCCAACCAGGTTTATACTGATTCCATTTTTGTATCATCACTTTTTCATTTAAATTTGAAAGCAGATGAAGGTTGTTTATGTGAGGTTGTTCTGCAGTCAGGAGTTGCTCGAAGCAGTAGAACAAGAGAGAAGTTTTAGACTTAATCCAGTTAGAAACTCAACAATATTTCGACATCCCACTTTTGGTGACTTTGAGTTACAGCATGTATGTATCCAATATGATACTTACCCTAAAGTCATTAAATCATGGACACCAAAATCTAAGTTGGGGAACATTTTTTCTCAATGCAGCTGCCAGCTGGTGCTGATGAGGCTGACCTTGAAGAGCGTATACTCCAACACCTAGCTGCTGCAGCTGCCATGGGACAAGCTCGCCATAGTGCCAGAAGGGAAGGCCACAGACATCGGTCAGGAATTCATGGCCGTCCCCAATTGTTGGTGTTTTCTTCCCCTCCTAATTCTTCATCGACCTCTCAACTTCCTCGTGACAATCGGGAAGGTGAAGCAGCCTCAAGAATCATGGTAGCTACTGTATCACCACCTCAACCTGCTGGAGAAGAGTCTCCACAACTCAATGCTCCAGCATCTCCCGTGCAAACTGATCAGTCTTCTCCATCAGCACCTCAATACAGTCCACGTTCTGCCAGCCAACTTGGATCTCCTTCGAGCGATAGGTATTCATTATTCATTGGATTTATAGAGGTGGTGCTAATTTAATTGAAATGTGTCTTCGCATGCAGCTACATGGAATTTATCGATCATGTATTAATATTATTGTCCCACACCGTTCTTAGGAGATCCACCAGTCAACCAGTGCGAAGTAGTCAAGATAGAGCCGGACCATCATCAGAATTGCAATCACTCTCGGATTCACTGAAGTCTCGATTTAATGCAATGTCAATGAGGTTTGTAATATATGTCTTAATGGCTTTTATTTTTCCTAGTGTAATTTCTGATTACTTTGTTCTTTCATGACTTTAGCACCTCCATTATTCTTTTCTTTTCAGATACAAAGATTCAATCGCAAAGAGCACAAGAGGCTGGAAGGAGAAATTGTTCTCTCGCAATACTTCAATGTCAGATATTGGCTCTGAGGTTAGAAGAGAGGTTAATGTTGGGATAGCAACGGTATCGCGCATGATGGAACGTCTTGAAACAAGAGATGCTAGAAAAAGTAGCAGTCCTGAGTCCAGTAATGTAGGGGATAACAACCCGGTTTCGGAATCAAATGATAGACGGACACCAAAGAATGGAGGAAACAATCCTTTGAGCGTCTCAAATAAAAAAGGTTCATGCCCTGCAGAATCCAGTTCAAGTTGAACATTCTCAGAATTGGCTTCACTCAAAGGCCATCTTATAAGAGGTGAATACTGCAATTGATTGTTTCCTTCTTCCATACTACAAGAAATAGCCTGTAGTAGACTGATGTTTTAAAAAAAAAATATGGAAAAAAAAAAAAAAAAAAAAAAAAAAGCNAAAATGACTGAGCTTTAGTTTATTTTATAATTTGTTAGAGTCAATTTAAATATTAGTCCGTGTATCATTTATAACTAGTAAATAGCTTATTTACTTGTAAATTGACGCCGTCATAGTTGGAAGAATTTAAGACGCCTCTACTAGAAGCTTTTATATCTATAAGGAATGTTTCCTTCTCTTTTCCAATTGACGTGGGATCTCACATGTCATTAGGTTTAATATAGGGGTCTCATGCTATTTGTTGAATTTATAATGTGCGCTTATGGTAGAATACTGAAAGGTAAATAGAAAGAAACTATTGTAGACGTGTTTTGGAGTATTTCTCGTATATTTCCTTCTAGAAGGAAGAGTTCCTCTAGTTCTATAACTTAGGCCTCTAGTTCTATAACTTTTTTGATAATGCTCTTTTCTTCCATATCATTAAAGAGAAGATTCTTCTGGAGTGCTTAATTTTCCACTAATTAGTTAGTGGGTTGAATCATTCATTAGATGGCTGATTGATGACATTCTATTTTGTCAATTTCTCTTCATGCACAACCCACTCATTAGGTGGCTGATTGATGACATTCTATTTTGTCAATTTCTCTTCATGCAAGTAATTTTGATTATCTTGGTTGATTGAGCTTTATCTACGGCTATGCTCGAGTTGATATCCTTTGTTCTTCTTGACTTTATCATGATAACGTCGATAGTTTTACTATTACAGGACATTCGACTATTTAATGTCGTGTTTTATTTTAGGCTATAGAGGCAATAAGGCATGGGTTTGAAGTGTATCAATATATTGTTATAAACTTATGTCCAACACTTGACAATTGTGTTTATTTCACCATTGCCTCTTACTTTACCGTTCTTCGATGCCCACGACAAAAACTTATCATCATTGTTTCTATGTTTTTTATTGACAGAATGACTCGATGGAATTTTTTAGAATATAACCAAGGAGATTTGGCTTCCTCAACTACAATTGTGACCCCCTCTTTTAACCTAGTCATACAAAGGGTGAAAGTAGTCGAGCAATTCGAAATCGAATTGCTCGATTTTTAACACTAAATGTAAGCCCCACATAGTAATGACAGTTATGAGAATCGGCCCCTCACATAGAAACGACATTTGTGAGCAACGACTTGTAAATTTGAGCAAACTAATATTTGGGTTGAACTTATCAAGGATGGCACATATTCTATTTCATGACCAATATCACTTTCGATTTGTTTAGTGTTATTGAAATGAAGTAGCATATGCAGTTTACTCTTTTCTTTTAGTCGACACTCACA TGAATAAGGATAGACGTGGGGCATTGGTACGGAAGCGAGTGGCGCGAGTAGTAAAACTCTGCCACGAGTTAAAGCCCATCATAGCTCATACGCACTGACCCGACGACCGACCCAAGCGCAGCACTCAGTAGCAGCCTTTTATCAAGTCAAGGCCGGAGCCAATTCTCCTCCTCCTCCTCCTCCTCCTCCGCCTGCTCCTCCTCCTAGGGTTCCACTGGTTCCAATCCAATCTTATTTACCCGTTCTCTCACAAGCTTCTCCTGCTGATCGTCGTTTCTCATGGAGTCTCCAACGATGGACGAAACTAAGAATTCTGAAGCGCATTTGACATCAGCTGCAGCTTTTGTCGAAGGTGGAATCCAGGATGCTTGTGATGACGCTTGCAGTATATGTCTTGAAAACTTCTGTGACAATGATCCTTCAACGATGACCAGTTGCAAACATGAGTTTCATCTGCAGTGCGTTCTTGAATGGTGTCAGAGAAGCTCCCAATGCCCCATGTGTTGGCAACCTGTTAGTCTGAAGGATCCAACCAGTCAGGAGTTGCTCGAAGCAGTAGAACAAGAGAGAAGTTTTAGACTTAATCCAGTTAGAAACTCAACAATATTTCGACATCCCACTTTTGGTGACTTTGAGTTACAGCATCTGCCAGCTGGTGCTGATGAGGCTGACCTTGAAGAGCGTATACTCCAACACCTAGCTGCTGCAGCTGCCATGGGACAAGCTCGCCATAGTGCCAGAAGGGAAGGCCACAGACATCGGTCAGGAATTCATGGCCGTCCCCAATTGTTGGTGTTTTCTTCCCCTCCTAATTCTTCATCGACCTCTCAACTTCCTCGTGACAATCGGGAAGGTGAAGCAGCCTCAAGAATCATGGTAGCTACTGTATCACCACCTCAACCTGCTGGAGAAGAGTCTCCACAACTCAATGCTCCAGCATCTCCCGTGCAAACTGATCAGTCTTCTCCATCAGCACCTCAATACAGTCCACGTTCTGCCAGCCAACTTGGATCTCCTTCGAGCGATAGGAGATCCACCAGTCAACCAGTGCGAAGTAGTCAAGATAGAGCCGGACCATCATCAGAATTGCAATCACTCTCGGATTCACTGAAGTCTCGATTTAATGCAATGTCAATGAGATACAAAGATTCAATCGCAAAGAGCACAAGAGGCTGGAAGGAGAAATTGTTCTCTCGCAATACTTCAATGTCAGATATTGGCTCTGAGGTTAGAAGAGAGGTTAATGTTGGGATAGCAACGGTATCGCGCATGATGGAACGTCTTGAAACAAGAGATGCTAGAAAAAGTAGCAGTCCTGAGTCCAGTAATGTAGGGGATAACAACCCGGTTTCGGAATCAAATGATAGACGGACACCAAAGAATGGAGGAAACAATCCTTTGAGCGTCTCAAATAAAAAAGGTTCATGCCCTGCAGAATCCAGTTCAAGTTGAACATTCTCAGAATTGGCTTCACTCAAAGGCCATCTTATAAGAGAATGACTCGATGGAATTTTTTAGAATATAACCAAGGAGATTTGGCTTCCTCAACTACAATTGTGACCCCCTCTTTTAACCTAGTCATACAAAGGGTGAAAGTAGTCGAGCAATTCGAAATCGAATTGCTCGATTTTTAACACTAAATGTAAGCCCCACATAGTAATGACAGTTATGAGAATCGGCCCCTCACATAGAAACGACATTTGTGAGCAACGACTTGTAAATTTGAGCAAACTAATATTTGGGTTGAACTTATCAAGGATGGCACATATTCTATTTCATGACCAATATCACTTTCGATTTGTTTAGTGTTATTGAAATGAAGTAGCATATGCAGTTTACTCTTTTCTTTTAGTCGACACTCACA ATGGAGTCTCCAACGATGGACGAAACTAAGAATTCTGAAGCGCATTTGACATCAGCTGCAGCTTTTGTCGAAGGTGGAATCCAGGATGCTTGTGATGACGCTTGCAGTATATGTCTTGAAAACTTCTGTGACAATGATCCTTCAACGATGACCAGTTGCAAACATGAGTTTCATCTGCAGTGCGTTCTTGAATGGTGTCAGAGAAGCTCCCAATGCCCCATGTGTTGGCAACCTGTTAGTCTGAAGGATCCAACCAGTCAGGAGTTGCTCGAAGCAGTAGAACAAGAGAGAAGTTTTAGACTTAATCCAGTTAGAAACTCAACAATATTTCGACATCCCACTTTTGGTGACTTTGAGTTACAGCATCTGCCAGCTGGTGCTGATGAGGCTGACCTTGAAGAGCGTATACTCCAACACCTAGCTGCTGCAGCTGCCATGGGACAAGCTCGCCATAGTGCCAGAAGGGAAGGCCACAGACATCGGTCAGGAATTCATGGCCGTCCCCAATTGTTGGTGTTTTCTTCCCCTCCTAATTCTTCATCGACCTCTCAACTTCCTCGTGACAATCGGGAAGGTGAAGCAGCCTCAAGAATCATGGTAGCTACTGTATCACCACCTCAACCTGCTGGAGAAGAGTCTCCACAACTCAATGCTCCAGCATCTCCCGTGCAAACTGATCAGTCTTCTCCATCAGCACCTCAATACAGTCCACGTTCTGCCAGCCAACTTGGATCTCCTTCGAGCGATAGGAGATCCACCAGTCAACCAGTGCGAAGTAGTCAAGATAGAGCCGGACCATCATCAGAATTGCAATCACTCTCGGATTCACTGAAGTCTCGATTTAATGCAATGTCAATGAGATACAAAGATTCAATCGCAAAGAGCACAAGAGGCTGGAAGGAGAAATTGTTCTCTCGCAATACTTCAATGTCAGATATTGGCTCTGAGGTTAGAAGAGAGGTTAATGTTGGGATAGCAACGGTATCGCGCATGATGGAACGTCTTGAAACAAGAGATGCTAGAAAAAGTAGCAGTCCTGAGTCCAGTAATGTAGGGGATAACAACCCGGTTTCGGAATCAAATGATAGACGGACACCAAAGAATGGAGGAAACAATCCTTTGAGCGTCTCAAATAAAAAAGGTTCATGCCCTGCAGAATCCAGTTCAAGTTGA MESPTMDETKNSEAHLTSAAAFVEGGIQDACDDACSICLENFCDNDPSTMTSCKHEFHLQCVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQHLPAGADEADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSSTSQLPRDNREGEAASRIMVATVSPPQPAGEESPQLNAPASPVQTDQSSPSAPQYSPRSASQLGSPSSDRRSTSQPVRSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSESNDRRTPKNGGNNPLSVSNKKGSCPAESSSS Homology
BLAST of Cp4.1LG04g12500 vs. ExPASy Swiss-Prot
Match: Q9ZT42 (E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 SV=1) HSP 1 Score: 402.5 bits (1033), Expect = 5.4e-111 Identity = 232/386 (60.10%), Postives = 274/386 (70.98%), Query Frame = 0
BLAST of Cp4.1LG04g12500 vs. ExPASy Swiss-Prot
Match: Q4TU14 (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 6.7e-37 Identity = 124/334 (37.13%), Postives = 175/334 (52.40%), Query Frame = 0
BLAST of Cp4.1LG04g12500 vs. ExPASy Swiss-Prot
Match: Q2HIJ8 (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RHB1A PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.9e-08 Identity = 25/55 (45.45%), Postives = 35/55 (63.64%), Query Frame = 0
BLAST of Cp4.1LG04g12500 vs. ExPASy Swiss-Prot
Match: Q8LE94 (E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g02290 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.5e-07 Identity = 20/44 (45.45%), Postives = 27/44 (61.36%), Query Frame = 0
BLAST of Cp4.1LG04g12500 vs. ExPASy Swiss-Prot
Match: Q93ZF6 (E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 4.2e-07 Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 0
BLAST of Cp4.1LG04g12500 vs. NCBI nr
Match: XP_023531099.1 (E3 ubiquitin-protein ligase RHF2A-like isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 738 bits (1905), Expect = 6.95e-268 Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g12500 vs. NCBI nr
Match: XP_023531098.1 (E3 ubiquitin-protein ligase RHF2A-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 731 bits (1886), Expect = 9.96e-265 Identity = 390/408 (95.59%), Postives = 390/408 (95.59%), Query Frame = 0
BLAST of Cp4.1LG04g12500 vs. NCBI nr
Match: KAG7022145.1 (E3 ubiquitin-protein ligase RHF2A [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 726 bits (1874), Expect = 3.42e-263 Identity = 383/390 (98.21%), Postives = 386/390 (98.97%), Query Frame = 0
BLAST of Cp4.1LG04g12500 vs. NCBI nr
Match: XP_023531096.1 (E3 ubiquitin-protein ligase RHF2A-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531097.1 E3 ubiquitin-protein ligase RHF2A-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 727 bits (1876), Expect = 3.59e-263 Identity = 388/406 (95.57%), Postives = 388/406 (95.57%), Query Frame = 0
BLAST of Cp4.1LG04g12500 vs. NCBI nr
Match: KAG6588231.1 (E3 ubiquitin-protein ligase RHF2A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 723 bits (1867), Expect = 3.98e-262 Identity = 382/390 (97.95%), Postives = 385/390 (98.72%), Query Frame = 0
BLAST of Cp4.1LG04g12500 vs. ExPASy TrEMBL
Match: A0A6J1EBH9 (E3 ubiquitin-protein ligase RHF2A-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111432630 PE=4 SV=1) HSP 1 Score: 721 bits (1861), Expect = 1.71e-261 Identity = 380/390 (97.44%), Postives = 385/390 (98.72%), Query Frame = 0
BLAST of Cp4.1LG04g12500 vs. ExPASy TrEMBL
Match: A0A6J1EEY4 (E3 ubiquitin-protein ligase RHF2A-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432630 PE=4 SV=1) HSP 1 Score: 713 bits (1841), Expect = 3.47e-258 Identity = 382/408 (93.63%), Postives = 386/408 (94.61%), Query Frame = 0
BLAST of Cp4.1LG04g12500 vs. ExPASy TrEMBL
Match: A0A6J1ID33 (E3 ubiquitin-protein ligase RHF2A-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111472697 PE=4 SV=1) HSP 1 Score: 711 bits (1836), Expect = 1.10e-257 Identity = 375/388 (96.65%), Postives = 380/388 (97.94%), Query Frame = 0
BLAST of Cp4.1LG04g12500 vs. ExPASy TrEMBL
Match: A0A6J1EEX9 (E3 ubiquitin-protein ligase RHF2A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432630 PE=4 SV=1) HSP 1 Score: 710 bits (1832), Expect = 8.78e-257 Identity = 380/408 (93.14%), Postives = 385/408 (94.36%), Query Frame = 0
BLAST of Cp4.1LG04g12500 vs. ExPASy TrEMBL
Match: A0A6J1IF73 (E3 ubiquitin-protein ligase RHF2A-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472697 PE=4 SV=1) HSP 1 Score: 704 bits (1817), Expect = 1.57e-254 Identity = 377/408 (92.40%), Postives = 382/408 (93.63%), Query Frame = 0
BLAST of Cp4.1LG04g12500 vs. TAIR 10
Match: AT5G22000.1 (RING-H2 group F2A ) HSP 1 Score: 402.5 bits (1033), Expect = 3.8e-112 Identity = 232/386 (60.10%), Postives = 274/386 (70.98%), Query Frame = 0
BLAST of Cp4.1LG04g12500 vs. TAIR 10
Match: AT5G22000.3 (RING-H2 group F2A ) HSP 1 Score: 402.5 bits (1033), Expect = 3.8e-112 Identity = 232/386 (60.10%), Postives = 274/386 (70.98%), Query Frame = 0
BLAST of Cp4.1LG04g12500 vs. TAIR 10
Match: AT5G22000.2 (RING-H2 group F2A ) HSP 1 Score: 401.0 bits (1029), Expect = 1.1e-111 Identity = 231/385 (60.00%), Postives = 273/385 (70.91%), Query Frame = 0
BLAST of Cp4.1LG04g12500 vs. TAIR 10
Match: AT4G14220.1 (RING-H2 group F1A ) HSP 1 Score: 156.4 bits (394), Expect = 4.8e-38 Identity = 124/334 (37.13%), Postives = 175/334 (52.40%), Query Frame = 0
BLAST of Cp4.1LG04g12500 vs. TAIR 10
Match: AT4G00335.1 (RING-H2 finger B1A ) HSP 1 Score: 61.2 bits (147), Expect = 2.1e-09 Identity = 25/55 (45.45%), Postives = 35/55 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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